Rmu_ssc0000341.1_g000010

Cell division cycle

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000341.1
Physical Location & Seq
Reverse (-)
22091 .. 25906
3816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000341.1_g000010.1.cds

Sequence Viewer

Length: 1566 bp
atgtcggtggccatcaagacgtgcgatgtgctattgtttcaagaccactgtgggttgtttgcactaccaaaatcacatctccctggtgtagaggtgcagtcaccggcatgtttgttttcgggctctcaaatttggcagcatgaggcattgggatttagactttcatcgtctgtgtttctgttttctctgtgcctccttcgcttattattgtgcggatttgtgggttcaggtgctatggattcatcaagaaaggtcaattccctttacccaattcaagaaccgctctttccaagaaagcgcagtcgagaaaacttggataggttcatccctgatagggagtccatggacattggttatgcaaatgccgtgctcacagagaggagaacaggcaaagagaacccggttgagagctccgcatcgagtgtggcataccagaagctattggctgagacactcaacatgaaccggagaattcttacattcaagagcaaacctcctgccccaattgaaccaattcctagggcattgctttcacctccaagtcataaggccaaatccaggccccggagacacatttctcagactgcagagaagatattggatgctcccgatctctctgatgatttctacttgaatttactggactggggcagcaacaacatccttgcaatagctcttgaaagcacagtgtacctatgggatgcttcaaacagctccacctcagagctcgtcacagtttctgatggtgatggtcctgttacaagcattagctgggctgctgatgggaggcacattgctatcggactaaacaattcttgtgtcgaattgtgggattctatttctgttaaactgttaagaaaattgaagggtcaccatgaacgagtaggttcattggcatggaacaaggagattctcacaacaggttcaaaggatggaaatattatcaacaatgacgtaagagttagatcccatattgttcaaacgttcttgggccaccaggaggaggtttgtggactaaaatggtctgcctctggccaacagctggcaagtggaggtaacgataatctcgttttcatatgggataggtcagttgcctctccaaatgctcactggcttcacaggcttcaagatcacacttcagcagtcaaagcccttgcttggtgtccattccaagcgaatttactagcctctggtggcggtggaggggatgatacaattaagttctggaatgcacacacaggctcctgcgtaaattcagtcaacacaggctctcaagtgtgtgctttactgtggaacagccatgaacgcgagttgctaagctctcatggctttacagagaaccagctcatcctctggaagtacccttccatggtgaggttggcagagctcagtggtcacacttctagagtgctctatatgacgcagagcccagatgggttcactgttgcatcagcaggggacgagactctgaggtgctggaatgtgtttgggatcccagaagttgctaaatctgctcctaaacaaagtctgatgccattttctcccaagtactactgcattcgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

521

Amino Acids

57.48

Weight (kDa)

7.96

Isoelectric Point (pI)

55.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1042
AccBSI CCGCTC 1 cut(s) 283
AccII CGCG 1 cut(s) 1308
AciI CCGC 4 cut(s) 213, 281, 414, 1197
AclI AACGTT 1 cut(s) 983
AclWI GGATC 3 cut(s) 960, 1486, 1499
AcoI YGGCCR 2 cut(s) 9, 1033
AcsI RAATTY 5 cut(s) 129, 471, 634, 1177, 1252
AcuI CTGAAG 1 cut(s) 1122
AfaI GTAC 3 cut(s) 692, 1361, 1550
AfiI CCNNNNNNNGG 9 cut(s) 334, 558, 564, 1000, 1003, 1042, 1158, 1369, 1374
AjiI CACGTC 1 cut(s) 21
AjnI CCWGG 3 cut(s) 82, 557, 996
Alw21I GWGCWC 5 cut(s) 372, 413, 729, 1389, 1413
Alw26I GTCTC 3 cut(s) 443, 562, 1457
AlwI GGATC 3 cut(s) 960, 1486, 1499
AlwNI CAGNNNCTG 1 cut(s) 740
AoxI GGCC 5 cut(s) 9, 549, 560, 991, 1033
ApeKI GCWGC 3 cut(s) 136, 651, 776
ApoI RAATTY 5 cut(s) 129, 471, 634, 1177, 1252
Asp700I GAANNNNTTC 1 cut(s) 513
AspA2I CCTAGG 1 cut(s) 518
AspLEI GCGC 1 cut(s) 300
AspS9I GGNCC 3 cut(s) 561, 752, 991
AsuC2I CCSGG 2 cut(s) 401, 565
AsuHPI GGTGA 5 cut(s) 93, 525, 758, 863, 1384
AvaII GGWCC 1 cut(s) 752
AvrII CCTAGG 1 cut(s) 518
BalI TGGCCA 2 cut(s) 11, 1035
BamHI GGATCC 1 cut(s) 1491
BanII GRGCYC 5 cut(s) 125, 413, 729, 1389, 1430
Bbv12I GWGCWC 5 cut(s) 372, 413, 729, 1389, 1413
BbvI GCAGC 3 cut(s) 148, 663, 763
BccI CCATC 6 cut(s) 20, 737, 743, 776, 926, 1427
BceAI ACGGC 1 cut(s) 350
BciT130I CCWGG 3 cut(s) 84, 559, 998
BcnI CCSGG 2 cut(s) 401, 565
BcoDI GTCTC 3 cut(s) 443, 562, 1457
BfaI CTAG 3 cut(s) 519, 1184, 1404
BfmI CTRYAG 1 cut(s) 585
BisI GCNGC 3 cut(s) 137, 652, 777
BlnI CCTAGG 1 cut(s) 518
BlpI GCTNAGC 1 cut(s) 1316
BlsI GCNGC 3 cut(s) 138, 653, 778
BmcAI AGTACT 1 cut(s) 1550
Bme1390I CCNGG 5 cut(s) 84, 401, 559, 565, 998
Bme18I GGWCC 1 cut(s) 752
BmgBI CACGTC 1 cut(s) 21
BmgT120I GGNCC 3 cut(s) 561, 752, 991
BmiI GGNNCC 3 cut(s) 563, 1243, 1493
BmrFI CCNGG 5 cut(s) 84, 401, 559, 565, 998
BmrI ACTGGG 1 cut(s) 655
BmsI GCATC 5 cut(s) 425, 592, 691, 1457, 1521
BmuI ACTGGG 1 cut(s) 655
BplI GAGNNNNNCTC 2 cut(s) 478, 510
Bpu1102I GCTNAGC 1 cut(s) 1316
BpuEI CTTGAG 1 cut(s) 1257
BpuMI CCSGG 2 cut(s) 401, 565
BsaJI CCNNGG 5 cut(s) 82, 342, 518, 563, 1368
BsaWI WCCGGW 1 cut(s) 465
BsaXI ACNNNNNCTCC 2 cut(s) 1226, 1256
Bsc4I CCNNNNNNNGG 9 cut(s) 334, 558, 564, 1000, 1003, 1042, 1158, 1369, 1374
Bse118I RCCGGY 1 cut(s) 103
Bse1I ACTGG 3 cut(s) 645, 650, 1115
Bse3DI GCAATG 2 cut(s) 524, 792
BseBI CCWGG 3 cut(s) 84, 559, 998
BseDI CCNNGG 5 cut(s) 82, 342, 518, 563, 1368
BseGI GGATG 7 cut(s) 324, 607, 660, 706, 937, 1213, 1347
BseLI CCNNNNNNNGG 9 cut(s) 334, 558, 564, 1000, 1003, 1042, 1158, 1369, 1374
BseMI GCAATG 2 cut(s) 524, 792
BseMII CTCAG 5 cut(s) 438, 593, 735, 1402, 1460
BseNI ACTGG 3 cut(s) 645, 650, 1115
BseRI GAGGAG 2 cut(s) 394, 1016
BseXI GCAGC 3 cut(s) 148, 663, 763
BseYI CCCAGC 1 cut(s) 771
BsgI GTGCAG 1 cut(s) 116
Bsh1236I CGCG 1 cut(s) 1308
BshFI GGCC 5 cut(s) 11, 551, 562, 993, 1035
BsiHKAI GWGCWC 5 cut(s) 372, 413, 729, 1389, 1413
BsiSI CCGG 4 cut(s) 104, 401, 466, 565
BslFI GGGAC 1 cut(s) 1472
BslI CCNNNNNNNGG 9 cut(s) 334, 558, 564, 1000, 1003, 1042, 1158, 1369, 1374
BsmAI GTCTC 3 cut(s) 443, 562, 1457
BsmFI GGGAC 1 cut(s) 1472
BsmI GAATGC 2 cut(s) 1234, 1557
BsnI GGCC 5 cut(s) 11, 551, 562, 993, 1035
Bsp1286I GDGCHC 7 cut(s) 125, 372, 413, 729, 1389, 1413, 1430
Bsp143I GATC 4 cut(s) 610, 965, 1129, 1491
Bsp1720I GCTNAGC 1 cut(s) 1316
Bsp19I CCATGG 2 cut(s) 342, 1368
BspACI CCGC 4 cut(s) 213, 281, 414, 1197
BspANI GGCC 5 cut(s) 11, 551, 562, 993, 1035
BspCNI CTCAG 5 cut(s) 439, 592, 734, 1401, 1461
BspFNI CGCG 1 cut(s) 1308
BspLI GGNNCC 3 cut(s) 563, 1243, 1493
BspMAI CTGCAG 1 cut(s) 589
BspPI GGATC 3 cut(s) 960, 1486, 1499
BsrBI CCGCTC 1 cut(s) 283
BsrDI GCAATG 2 cut(s) 524, 792
BsrFI RCCGGY 1 cut(s) 103
BsrI ACTGG 3 cut(s) 645, 650, 1115
BssAI RCCGGY 1 cut(s) 103
BssECI CCNNGG 5 cut(s) 82, 342, 518, 563, 1368
BssMI GATC 4 cut(s) 610, 965, 1129, 1491
BssT1I CCWWGG 3 cut(s) 342, 518, 1368
Bst2UI CCWGG 3 cut(s) 84, 559, 998
Bst4CI ACNGT 6 cut(s) 50, 688, 736, 852, 1290, 1444
BstC8I GCNNGC 1 cut(s) 1044
BstDEI CTNAG 6 cut(s) 447, 579, 721, 1316, 1388, 1469
BstDSI CCRYGG 2 cut(s) 342, 1368
BstEII GGTNACC 1 cut(s) 869
BstF5I GGATG 7 cut(s) 324, 607, 660, 706, 937, 1213, 1347
BstFNI CGCG 1 cut(s) 1308
BstHHI GCGC 1 cut(s) 300
BstKTI GATC 4 cut(s) 613, 968, 1132, 1494
BstMAI GTCTC 3 cut(s) 443, 562, 1457
BstMBI GATC 4 cut(s) 610, 965, 1129, 1491
BstMWI GCNNNNNNNGC 6 cut(s) 198, 1120, 1148, 1305, 1326, 1511
BstNI CCWGG 3 cut(s) 84, 559, 998
BstNSI RCATGY 1 cut(s) 111
BstPI GGTNACC 1 cut(s) 869
BstSCI CCNGG 5 cut(s) 82, 399, 557, 563, 996
BstSFI CTRYAG 1 cut(s) 585
BstUI CGCG 1 cut(s) 1308
BstV1I GCAGC 3 cut(s) 148, 663, 763
BstX2I RGATCY 2 cut(s) 965, 1491
BstYI RGATCY 2 cut(s) 965, 1491
BsuRI GGCC 5 cut(s) 11, 551, 562, 993, 1035
BtgI CCRYGG 2 cut(s) 342, 1368
BtgZI GCGATG 1 cut(s) 39
BtrI CACGTC 1 cut(s) 21
BtsCI GGATG 7 cut(s) 324, 607, 660, 706, 937, 1213, 1347
BtsIMutI CAGTG 5 cut(s) 46, 693, 1108, 1396, 1440
Cac8I GCNNGC 1 cut(s) 1044
CaiI CAGNNNCTG 1 cut(s) 740
CfoI GCGC 1 cut(s) 300
Cfr10I RCCGGY 1 cut(s) 103
Cfr13I GGNCC 3 cut(s) 561, 752, 991
CseI GACGC 1 cut(s) 1429
Csp6I GTAC 3 cut(s) 691, 1360, 1549
CviAII CATG 9 cut(s) 108, 140, 343, 460, 875, 897, 1301, 1325, 1369
CviQI GTAC 3 cut(s) 691, 1360, 1549
DdeI CTNAG 6 cut(s) 447, 579, 721, 1316, 1388, 1469
DpnI GATC 4 cut(s) 612, 967, 1131, 1493
DpnII GATC 4 cut(s) 610, 965, 1129, 1491
EaeI YGGCCR 2 cut(s) 9, 1033
Ecl136II GAGCTC 3 cut(s) 411, 727, 1387
Eco130I CCWWGG 3 cut(s) 342, 518, 1368
Eco24I GRGCYC 5 cut(s) 125, 413, 729, 1389, 1430
Eco47I GGWCC 1 cut(s) 752
Eco53kI GAGCTC 3 cut(s) 411, 727, 1387
Eco57I CTGAAG 1 cut(s) 1122
Eco91I GGTNACC 1 cut(s) 869
EcoICRI GAGCTC 3 cut(s) 411, 727, 1387
EcoO109I RGGNCCY 1 cut(s) 561
EcoO65I GGTNACC 1 cut(s) 869
EcoRI GAATTC 1 cut(s) 471
EcoRII CCWGG 3 cut(s) 82, 557, 996
EcoT14I CCWWGG 3 cut(s) 342, 518, 1368
EcoT38I GRGCYC 5 cut(s) 125, 413, 729, 1389, 1430
ErhI CCWWGG 3 cut(s) 342, 518, 1368
FaeI CATG 9 cut(s) 111, 143, 346, 463, 878, 900, 1304, 1328, 1372
FaqI GGGAC 1 cut(s) 1472
FatI CATG 9 cut(s) 107, 139, 342, 459, 874, 896, 1300, 1324, 1368
FauNDI CATATG 1 cut(s) 1076
Fnu4HI GCNGC 3 cut(s) 137, 652, 777
FokI GGATG 7 cut(s) 311, 614, 647, 713, 944, 1220, 1334
FriOI GRGCYC 5 cut(s) 125, 413, 729, 1389, 1430
Fsp4HI GCNGC 3 cut(s) 137, 652, 777
FspBI CTAG 3 cut(s) 519, 1184, 1404
GlaI GCGC 1 cut(s) 299
GluI GCNGC 3 cut(s) 137, 652, 777
GsaI CCCAGC 1 cut(s) 775
HaeIII GGCC 5 cut(s) 11, 551, 562, 993, 1035
HapII CCGG 4 cut(s) 104, 401, 466, 565
HgaI GACGC 1 cut(s) 1429
HhaI GCGC 1 cut(s) 300
Hin1II CATG 9 cut(s) 111, 143, 346, 463, 878, 900, 1304, 1328, 1372
Hin6I GCGC 1 cut(s) 298
HinP1I GCGC 1 cut(s) 298
HincII GTYRAC 1 cut(s) 1261
HindII GTYRAC 1 cut(s) 1261
HinfI GANTC 5 cut(s) 239, 338, 833, 910, 1465
HpaII CCGG 4 cut(s) 104, 401, 466, 565
HphI GGTGA 5 cut(s) 93, 525, 758, 863, 1384
Hpy166II GTNNAC 4 cut(s) 691, 1013, 1261, 1440
Hpy188I TCNGA 7 cut(s) 582, 619, 724, 742, 803, 1470, 1530
Hpy8I GTNNAC 4 cut(s) 691, 1013, 1261, 1440
HpyAV CCTTC 3 cut(s) 206, 859, 1374
HpyCH4III ACNGT 6 cut(s) 50, 688, 736, 852, 1290, 1444
HpyCH4IV ACGT 3 cut(s) 20, 954, 983
HpyCH4V TGCA 8 cut(s) 62, 97, 359, 587, 668, 1232, 1448, 1557
HpyF10VI GCNNNNNNNGC 6 cut(s) 198, 1120, 1148, 1305, 1326, 1511
HpyF3I CTNAG 6 cut(s) 447, 579, 721, 1316, 1388, 1469
HpySE526I ACGT 3 cut(s) 20, 954, 983
Hsp92II CATG 9 cut(s) 111, 143, 346, 463, 878, 900, 1304, 1328, 1372
HspAI GCGC 1 cut(s) 298
Kzo9I GATC 4 cut(s) 610, 965, 1129, 1491
LmnI GCTCC 5 cut(s) 416, 610, 719, 1247, 1519
Lsp1109I GCAGC 3 cut(s) 148, 663, 763
LweI GCATC 5 cut(s) 425, 592, 691, 1457, 1521
MaeI CTAG 3 cut(s) 519, 1184, 1404
MaeII ACGT 3 cut(s) 20, 954, 983
MaeIII GTNAC 6 cut(s) 99, 730, 757, 869, 1055, 1394
MalI GATC 4 cut(s) 612, 967, 1131, 1493
MbiI CCGCTC 1 cut(s) 283
MboI GATC 4 cut(s) 610, 965, 1129, 1491
MboII GAAGA 1 cut(s) 604
MfeI CAATTG 1 cut(s) 504
MflI RGATCY 2 cut(s) 965, 1491
MhlI GDGCHC 7 cut(s) 125, 372, 413, 729, 1389, 1413, 1430
MlsI TGGCCA 2 cut(s) 11, 1035
MluNI TGGCCA 2 cut(s) 11, 1035
MlyI GAGTC 2 cut(s) 347, 1459
Mox20I TGGCCA 2 cut(s) 11, 1035
MroXI GAANNNNTTC 1 cut(s) 513
MscI TGGCCA 2 cut(s) 11, 1035
MseI TTAA 3 cut(s) 846, 854, 1218
MslI CAYNNNNRTG 2 cut(s) 106, 895
Msp20I TGGCCA 2 cut(s) 11, 1035
MspA1I CMGCKG 1 cut(s) 1042
MspI CCGG 4 cut(s) 104, 401, 466, 565
MspR9I CCNGG 5 cut(s) 84, 401, 559, 565, 998
MunI CAATTG 1 cut(s) 504
Mva1269I GAATGC 2 cut(s) 1234, 1557
MvaI CCWGG 3 cut(s) 84, 559, 998
MvnI CGCG 1 cut(s) 1308
MwoI GCNNNNNNNGC 6 cut(s) 198, 1120, 1148, 1305, 1326, 1511
NciI CCSGG 2 cut(s) 401, 565
NcoI CCATGG 2 cut(s) 342, 1368
NdeI CATATG 1 cut(s) 1076
NdeII GATC 4 cut(s) 610, 965, 1129, 1491
NlaIII CATG 9 cut(s) 111, 143, 346, 463, 878, 900, 1304, 1328, 1372
NlaIV GGNNCC 3 cut(s) 563, 1243, 1493
NmuCI GTSAC 4 cut(s) 99, 730, 869, 1394
NspI RCATGY 1 cut(s) 111
PcsI WCGNNNNNNNCGW 1 cut(s) 1065
PctI GAATGC 2 cut(s) 1234, 1557
PdmI GAANNNNTTC 1 cut(s) 513
PfeI GAWTC 3 cut(s) 239, 833, 910
PflMI CCANNNNNTGG 1 cut(s) 1042
PkrI GCNGC 3 cut(s) 138, 653, 778
PleI GAGTC 2 cut(s) 346, 1459
PpsI GAGTC 2 cut(s) 346, 1459
Psp124BI GAGCTC 3 cut(s) 413, 729, 1389
Psp1406I AACGTT 1 cut(s) 983
Psp6I CCWGG 3 cut(s) 82, 557, 996
PspEI GGTNACC 1 cut(s) 869
PspFI CCCAGC 1 cut(s) 771
PspGI CCWGG 3 cut(s) 82, 557, 996
PspN4I GGNNCC 3 cut(s) 563, 1243, 1493
PspPI GGNCC 3 cut(s) 561, 752, 991
PstI CTGCAG 1 cut(s) 589
PstNI CAGNNNCTG 1 cut(s) 740
PsuI RGATCY 2 cut(s) 965, 1491
PvuII CAGCTG 1 cut(s) 1042
RsaI GTAC 3 cut(s) 692, 1361, 1550
RsaNI GTAC 3 cut(s) 691, 1360, 1549
RseI CAYNNNNRTG 2 cut(s) 106, 895
SacI GAGCTC 3 cut(s) 413, 729, 1389
SaqAI TTAA 3 cut(s) 846, 854, 1218
SatI GCNGC 3 cut(s) 137, 652, 777
Sau3AI GATC 4 cut(s) 610, 965, 1129, 1491
Sau96I GGNCC 3 cut(s) 561, 752, 991
ScaI AGTACT 1 cut(s) 1550
SchI GAGTC 2 cut(s) 347, 1459
ScrFI CCNGG 5 cut(s) 84, 401, 559, 565, 998
SduI GDGCHC 7 cut(s) 125, 372, 413, 729, 1389, 1413, 1430
SfaNI GCATC 5 cut(s) 425, 592, 691, 1457, 1521
SfcI CTRYAG 1 cut(s) 585
SinI GGWCC 1 cut(s) 752
SmiMI CAYNNNNRTG 2 cut(s) 106, 895
SmlI CTYRAG 1 cut(s) 1272
SmoI CTYRAG 1 cut(s) 1272
SsiI CCGC 4 cut(s) 213, 281, 414, 1197
SspI AATATT 1 cut(s) 940
SspMI CTAG 3 cut(s) 519, 1184, 1404
SstI GAGCTC 3 cut(s) 413, 729, 1389
StyD4I CCNGG 5 cut(s) 82, 399, 557, 563, 996
StyI CCWWGG 3 cut(s) 342, 518, 1368
TaaI ACNGT 6 cut(s) 50, 688, 736, 852, 1290, 1444
TaiI ACGT 3 cut(s) 23, 957, 986
TaqI TCGA 3 cut(s) 304, 419, 822
TatI WGTACW 1 cut(s) 1548
TfiI GAWTC 3 cut(s) 239, 833, 910
Tru1I TTAA 3 cut(s) 846, 854, 1218
Tru9I TTAA 3 cut(s) 846, 854, 1218
TscAI CASTG 5 cut(s) 53, 693, 1115, 1396, 1447
TseFI GTSAC 4 cut(s) 99, 730, 869, 1394
TseI GCWGC 3 cut(s) 136, 651, 776
Tsp45I GTSAC 4 cut(s) 99, 730, 869, 1394
TspDTI ATGAA 8 cut(s) 153, 231, 313, 476, 879, 891, 1063, 1317
TspRI CASTG 5 cut(s) 53, 693, 1115, 1396, 1447
Van91I CCANNNNNTGG 1 cut(s) 1042
VpaK11BI GGWCC 1 cut(s) 752
XapI RAATTY 5 cut(s) 129, 471, 634, 1177, 1252
XbaI TCTAGA 1 cut(s) 1403
XceI RCATGY 1 cut(s) 111
XcmI CCANNNNNNNNNTGG 2 cut(s) 1107, 1375
XmaJI CCTAGG 1 cut(s) 518
XmnI GAANNNNTTC 1 cut(s) 513
XspI CTAG 3 cut(s) 519, 1184, 1404
ZrmI AGTACT 1 cut(s) 1550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.