MD08G1249600.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0006232
Physical Location & Seq
Forward (+)
31391201 .. 31394317
3117 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1249600.v1.1.491

Sequence Viewer

Length: 2313 bp
ATGTCATTGGCAGAGTTAGAGAGCTTAGCATACAAACTCTGCAATTTGAGCCAGCTCAGGCAGCTTCATGCCCGCCTCCTCATCAACCTTTCCCTCCACCGTCACACCCAGTGCCAGTGGGTCTCACTCCTCATCTCCCAATGCACGCGCCTCCGCGCCCCGCCCTCCTATACCCGCCTCATCTTCCACTCAACGCCTCGCCCCAACGTCCACGTCTTCACCTCCATGTTCAAGTACTACTCCAATTCCAATTTCAACTTAGGAGGCGTTGATCAAGTTGCTTCTCTCTATCGACAAATGCAGCAGCGCTCTGACTTAACCATCGGCACCTTCGTCTACCCGGTTTTGATCAAGTCAGCCGCCAGTGCCGGCATTCAGTTCCATGCCCATGTTCTCAAGTTAGGTCTTGCTTCTGATCACTACGTCCGCAATGCCATCATGGCCTTCTATGCTAAATACGGCCCGGTTGAGCACGCCCGATACCTGTTTGCTGAAATGCATGACTCAACTCTTGTGGACTGGAATAATATGATTTTTGGCTACTGGAAGTGGGGGAATAAAGATGATGCCTGCAAACTCTTCGATATGATGCCCGAAAGGAATGTTGTTACTTGGACTTCCATGGTTACTGGATATGCTAGGATCAAGGATTTGAAGAACGCAAGGAGGTATTTTGATCAAATTCCGCAGAAAAATGTTGTATCCTGGAATGCAATGCTCTCGGCTTATGCTCAGAATGGATGTCCTGAAGACGCTTTAAGATTGTTTGATGACATGATGAACTCCGGAGATCAACCAAATGAAACTACTTGGGCAATTGTCATTTCATCATGTTCGTCATGCGGTGATTGCTCCCTTGCTGATTCGCTCGTTCAAAAGCTCAACCAAAAGCAGATCCATTTAAGCTATTTTTCCAAGACAGCGTTGCTTGATATGTATGCAAAGCGTGGGAGCCTCCATACTGCTAGACAAATTTTTGATGAATTGGGGGCGTATAGGAACACCATTACCTGGAATGCCATGATATCAGCATATACAAGGGTCGGGGATTTGGCTTCTGCTAGAGAGCTGTTTGATAGGATGCCACAAAAGGATGTTGTCTCGTGGAACTCAATGGTTTCTGGTTATGCTCAAAATGGGCAGTCAGCTCTTGCACTTGATCTCTTTAAAGATATGATTAATGCTGCTGATGGTCTCAAACCAAATGAGGTAACTATGGTGAGTGTCATCTCAGCATGTGGACATCTTGGGGCCTTAGACATCGGTAATTGGGTCATCAGTATTGTCAGGAAACACCATATCAGGCTAAGTGTATCAGGATATAATTCCTTGATATTCTTGTACTCTAAATGTGGAAGCATGGAAGATGCCAAGATGACATTTCAAGAAATGAAAACAAGAGACGTAGTTTCCTACAACACTTTGATTGCAGGGTTTGCAGCTCATGGTCATGGGATGGAAGCCGTCAAACTACTGTTGAAGATGAAAGGAGAGTTTATTGAACCGGACCGTGTAACATATATTGGTATTCTTTCAGCATGTAGCCATGCAGGGTTGTTAGAAGAAGGATGGAAGGTTTTTGAGTCAATCAAAGCACCTGATGTAGATCATTATGCATGTGTGGTTGATTTGTTAGGTCGAGCGGGTAAACTAGATGAAGCAAAAGAAATAATTGATAGCATGCTGAAGGAACCACATGCTGGAGTTTATGGGTCTCTTTTAAATGCTAGCCGAATCCACAAAAGAATTGATCTTGGGGAGTTTGCTGCAAGCAAGCTGTTTGAGCTTGAACCACATAATTCAGGGAATTACATTTTACTTTCAAACATATACTCCTCAGCAGGCAGGTGGGATGATGTTGTGAGAGTTAGAGAATCAATGAGAAAAATAGGCGTGAAGAAAGCAACGGGGTGGAGTTGGGTTGAATACAAAGGCAAGATGCACAAGTTCATTGTGGGAGATAGATCACATGAGCAGTCGGAAGACATTTATAGGCTATTGGCAGAATTAGGGAGGAAAATGAGAAATGCTGGGTACATGGCTGATAAGACCTGTGTGCTAAGAGATGTTGAGGAGGAAGAGAAAGAAGAGATGGTGGGTACCCATAGTGAAAAATTGGCAGTTTGTTTCGCTCTTCTTGTTACCGATGCAGAGGCAGTGATTAGGGTAGTGAAGAATCTGAGGGTGTGCTGGGATTGCCACACAGCTATCAAGATGATATCTAAGTTGGAAGGAAGGAAAATTATTTTGAGGGATAATAACAGGTTCCACTGTTTCAGTGATGGGGTGTGTTCTTGCGGAGACTATTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

771

Amino Acids

87.06

Weight (kDa)

8.35

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 231 - 279 2.3e-13 PPR repeat family
PPR PF01535 234 - 263 4.7e-09 PPR repeat
PPR_2 PF13041 333 - 365 4.5e-06 PPR repeat family
PPR PF01535 336 - 365 4.3e-07 PPR repeat
PPR_2 PF13041 364 - 414 2.1e-10 PPR repeat family
PPR PF01535 367 - 393 7.3e-07 PPR repeat
PPR_2 PF13041 467 - 515 4.3e-11 PPR repeat family
E_motif PF20431 580 - 642 1.7e-22 E motif
DYW_deaminase PF14432 678 - 770 8.7e-38 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1836
Acc36I ACCTGC 1 cut(s) 1836
Acc65I GGTACC 1 cut(s) 2099
AccB1I GGYRCC 2 cut(s) 326, 2099
AccB7I CCANNNNNTGG 2 cut(s) 1011, 1700
AccBSI CCGCTC 1 cut(s) 1643
AccI GTMKAC 1 cut(s) 336
AccII CGCG 2 cut(s) 148, 156
AccIII TCCGGA 1 cut(s) 785
AclWI GGATC 2 cut(s) 650, 889
AcsI RAATTY 2 cut(s) 681, 972
AcuI CTGAAG 2 cut(s) 768, 1706
AdeI CACNNNGTG 1 cut(s) 111
AfaI GTAC 4 cut(s) 236, 1343, 2036, 2101
AfeI AGCGCT 1 cut(s) 308
AfiI CCNNNNNNNGG 2 cut(s) 1011, 1700
AjiI CACGTC 1 cut(s) 214
AjnI CCWGG 2 cut(s) 704, 1010
AjuI GAANNNNNNNTTGG 2 cut(s) 236, 268
Alw21I GWGCWC 1 cut(s) 474
Alw26I GTCTC 6 cut(s) 127, 1105, 1199, 1395, 1719, 2295
AlwI GGATC 2 cut(s) 650, 889
Aor13HI TCCGGA 1 cut(s) 785
Aor51HI AGCGCT 1 cut(s) 308
AoxI GGCC 3 cut(s) 441, 460, 1251
ApeKI GCWGC 6 cut(s) 61, 301, 304, 1184, 1439, 1766
ApoI RAATTY 2 cut(s) 681, 972
AseI ATTAAT 1 cut(s) 1179
Asp718I GGTACC 1 cut(s) 2099
AspLEI GCGC 3 cut(s) 150, 158, 309
AspS9I GGNCC 3 cut(s) 461, 1251, 1507
AsuC2I CCSGG 2 cut(s) 341, 464
AsuHPI GGTGA 3 cut(s) 211, 857, 1231
AsuNHI GCTAGC 1 cut(s) 1727
AvaII GGWCC 1 cut(s) 1507
BanI GGYRCC 2 cut(s) 326, 2099
BauI CACGAG 1 cut(s) 1102
BbsI GAAGAC 3 cut(s) 208, 756, 1989
Bbv12I GWGCWC 1 cut(s) 474
BbvCI CCTCAGC 1 cut(s) 1837
BbvI GCAGC 6 cut(s) 73, 313, 316, 1171, 1451, 1753
BccI CCATC 7 cut(s) 329, 443, 1184, 1450, 1563, 2086, 2276
BceAI ACGGC 2 cut(s) 475, 1448
BcgI CGANNNNNNTGC 4 cut(s) 562, 596, 702, 736
BciT130I CCWGG 2 cut(s) 706, 1012
BciVI GTATCC 1 cut(s) 712
BclI TGATCA 4 cut(s) 271, 348, 415, 676
BcnI CCSGG 2 cut(s) 341, 464
BcoDI GTCTC 6 cut(s) 127, 1105, 1199, 1395, 1719, 2295
BfaI CTAG 5 cut(s) 639, 966, 1062, 1652, 1728
BfoI RGCGCY 1 cut(s) 310
BfuAI ACCTGC 1 cut(s) 1836
BfuI GTATCC 1 cut(s) 712
BglI GCCNNNNNGGC 1 cut(s) 440
BisI GCNGC 7 cut(s) 62, 302, 305, 360, 1185, 1440, 1767
BlpI GCTNAGC 1 cut(s) 25
BlsI GCNGC 7 cut(s) 63, 303, 306, 361, 1186, 1441, 1768
BmcAI AGTACT 1 cut(s) 236
Bme1390I CCNGG 4 cut(s) 341, 464, 706, 1012
Bme18I GGWCC 1 cut(s) 1507
BmgBI CACGTC 1 cut(s) 214
BmgT120I GGNCC 3 cut(s) 461, 1251, 1507
BmiI GGNNCC 6 cut(s) 328, 953, 1252, 1692, 2101, 2267
BmrFI CCNGG 4 cut(s) 341, 464, 706, 1012
BmrI ACTGGG 1 cut(s) 103
BmsI GCATC 6 cut(s) 556, 579, 1071, 1357, 1929, 2137
BmtI GCTAGC 1 cut(s) 1731
BmuI ACTGGG 1 cut(s) 103
BpiI GAAGAC 3 cut(s) 208, 756, 1989
BpmI CTGGAG 1 cut(s) 1722
Bpu10I CCTNAGC 2 cut(s) 56, 1837
Bpu1102I GCTNAGC 1 cut(s) 25
BpuEI CTTGAG 1 cut(s) 380
BpuMI CCSGG 2 cut(s) 341, 464
BsaBI GATNNNNATC 1 cut(s) 1605
BsaI GGTCTC 3 cut(s) 127, 1199, 1719
BsaJI CCNNGG 1 cut(s) 621
BsaWI WCCGGW 2 cut(s) 785, 1504
BsaXI ACNNNNNCTCC 2 cut(s) 1817, 1847
Bsc4I CCNNNNNNNGG 2 cut(s) 1011, 1700
Bse118I RCCGGY 1 cut(s) 368
Bse1I ACTGG 6 cut(s) 109, 115, 363, 524, 548, 634
Bse3DI GCAATG 2 cut(s) 436, 720
Bse8I GATNNNNATC 1 cut(s) 1605
BseAI TCCGGA 1 cut(s) 785
BseBI CCWGG 2 cut(s) 706, 1012
BseDI CCNNGG 1 cut(s) 621
BseGI GGATG 6 cut(s) 746, 1086, 1099, 1461, 1574, 1858
BseJI GATNNNNATC 1 cut(s) 1605
BseLI CCNNNNNNNGG 2 cut(s) 1011, 1700
BseMI GCAATG 2 cut(s) 436, 720
BseMII CTCAG 5 cut(s) 70, 746, 1245, 1851, 2171
BseNI ACTGG 6 cut(s) 109, 115, 363, 524, 548, 634
BseRI GAGGAG 4 cut(s) 68, 119, 1825, 2087
BseXI GCAGC 6 cut(s) 73, 313, 316, 1171, 1451, 1753
BseYI CCCAGC 2 cut(s) 2030, 2190
Bsh1236I CGCG 2 cut(s) 148, 156
BshFI GGCC 3 cut(s) 443, 462, 1253
BshNI GGYRCC 2 cut(s) 326, 2099
BsiHKAI GWGCWC 1 cut(s) 474
BsiSI CCGG 5 cut(s) 341, 369, 464, 786, 1505
BslI CCNNNNNNNGG 2 cut(s) 1011, 1700
BsmAI GTCTC 6 cut(s) 127, 1105, 1199, 1395, 1719, 2295
BsmBI CGTCTC 1 cut(s) 1395
BsmI GAATGC 3 cut(s) 372, 715, 1021
BsnI GGCC 3 cut(s) 443, 462, 1253
Bso31I GGTCTC 3 cut(s) 127, 1199, 1719
Bsp1286I GDGCHC 1 cut(s) 474
Bsp13I TCCGGA 1 cut(s) 785
Bsp1720I GCTNAGC 1 cut(s) 25
Bsp19I CCATGG 1 cut(s) 621
BspANI GGCC 3 cut(s) 443, 462, 1253
BspCNI CTCAG 5 cut(s) 69, 745, 1244, 1850, 2172
BspEI TCCGGA 1 cut(s) 785
BspFNI CGCG 2 cut(s) 148, 156
BspLI GGNNCC 6 cut(s) 328, 953, 1252, 1692, 2101, 2267
BspMI ACCTGC 1 cut(s) 1836
BspOI GCTAGC 1 cut(s) 1731
BspPI GGATC 2 cut(s) 650, 889
BspQI GCTCTTC 1 cut(s) 2139
BspT107I GGYRCC 2 cut(s) 326, 2099
BspTNI GGTCTC 3 cut(s) 127, 1199, 1719
BsrBI CCGCTC 1 cut(s) 1643
BsrDI GCAATG 2 cut(s) 436, 720
BsrFI RCCGGY 1 cut(s) 368
BsrI ACTGG 6 cut(s) 109, 115, 363, 524, 548, 634
BssAI RCCGGY 1 cut(s) 368
BssECI CCNNGG 1 cut(s) 621
BssSI CACGAG 1 cut(s) 1102
BssT1I CCWWGG 1 cut(s) 621
Bst2BI CACGAG 1 cut(s) 1102
Bst2UI CCWGG 2 cut(s) 706, 1012
Bst4CI ACNGT 4 cut(s) 101, 1476, 1511, 2273
Bst6I CTCTTC 4 cut(s) 584, 2073, 2082, 2139
BstAPI GCANNNNNTGC 1 cut(s) 1436
BstDSI CCRYGG 1 cut(s) 621
BstF5I GGATG 6 cut(s) 746, 1086, 1099, 1461, 1574, 1858
BstFNI CGCG 2 cut(s) 148, 156
BstH2I RGCGCY 1 cut(s) 310
BstHHI GCGC 3 cut(s) 150, 158, 309
BstMAI GTCTC 6 cut(s) 127, 1105, 1199, 1395, 1719, 2295
BstMWI GCNNNNNNNGC 9 cut(s) 48, 61, 365, 440, 449, 849, 1436, 1783, 2196
BstNI CCWGG 2 cut(s) 706, 1012
BstNSI RCATGY 5 cut(s) 1239, 1542, 1620, 1684, 1700
BstSCI CCNGG 4 cut(s) 339, 462, 704, 1010
BstUI CGCG 2 cut(s) 148, 156
BstV1I GCAGC 6 cut(s) 73, 313, 316, 1171, 1451, 1753
BstV2I GAAGAC 3 cut(s) 208, 756, 1989
BstX2I RGATCY 1 cut(s) 894
BstYI RGATCY 1 cut(s) 894
BsuI GTATCC 1 cut(s) 712
BsuRI GGCC 3 cut(s) 443, 462, 1253
BtgI CCRYGG 1 cut(s) 621
BtrI CACGTC 1 cut(s) 214
BtsCI GGATG 6 cut(s) 746, 1086, 1099, 1461, 1574, 1858
BtsI GCAGTG 1 cut(s) 2163
BtsIMutI CAGTG 6 cut(s) 116, 122, 370, 2163, 2269, 2284
BveI ACCTGC 1 cut(s) 1836
CfoI GCGC 3 cut(s) 150, 158, 309
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 3 cut(s) 461, 1251, 1507
CpoI CGGWCCG 1 cut(s) 1507
CseI GACGC 1 cut(s) 761
Csp6I GTAC 4 cut(s) 235, 1342, 2035, 2100
CspCI CAANNNNNGTGG 2 cut(s) 495, 530
CspI CGGWCCG 1 cut(s) 1507
CviQI GTAC 4 cut(s) 235, 1342, 2035, 2100
DraI TTTAAA 2 cut(s) 1168, 1722
DraIII CACNNNGTG 1 cut(s) 111
Eam1104I CTCTTC 4 cut(s) 584, 2073, 2082, 2139
EarI CTCTTC 4 cut(s) 584, 2073, 2082, 2139
Eco130I CCWWGG 1 cut(s) 621
Eco31I GGTCTC 3 cut(s) 127, 1199, 1719
Eco32I GATATC 2 cut(s) 1026, 2220
Eco47I GGWCC 1 cut(s) 1507
Eco47III AGCGCT 1 cut(s) 308
Eco57I CTGAAG 2 cut(s) 768, 1706
EcoO109I RGGNCCY 1 cut(s) 1251
EcoRII CCWGG 2 cut(s) 704, 1010
EcoRV GATATC 2 cut(s) 1026, 2220
EcoT14I CCWWGG 1 cut(s) 621
EcoT22I ATGCAT 2 cut(s) 501, 1618
ErhI CCWWGG 1 cut(s) 621
Esp3I CGTCTC 1 cut(s) 1395
FauI CCCGC 4 cut(s) 80, 168, 182, 1636
FbaI TGATCA 4 cut(s) 271, 348, 415, 676
FblI GTMKAC 1 cut(s) 336
Fnu4HI GCNGC 7 cut(s) 62, 302, 305, 360, 1185, 1440, 1767
FokI GGATG 6 cut(s) 753, 1093, 1106, 1468, 1581, 1865
Fsp4HI GCNGC 7 cut(s) 62, 302, 305, 360, 1185, 1440, 1767
FspBI CTAG 5 cut(s) 639, 966, 1062, 1652, 1728
GlaI GCGC 3 cut(s) 149, 157, 308
GluI GCNGC 7 cut(s) 62, 302, 305, 360, 1185, 1440, 1767
GsaI CCCAGC 2 cut(s) 2034, 2194
GsuI CTGGAG 1 cut(s) 1722
HaeII RGCGCY 1 cut(s) 310
HaeIII GGCC 3 cut(s) 443, 462, 1253
HapII CCGG 5 cut(s) 341, 369, 464, 786, 1505
HgaI GACGC 1 cut(s) 761
HhaI GCGC 3 cut(s) 150, 158, 309
Hin6I GCGC 3 cut(s) 148, 156, 307
HinP1I GCGC 3 cut(s) 148, 156, 307
HinfI GANTC 6 cut(s) 503, 863, 1583, 1734, 1874, 2176
HpaII CCGG 5 cut(s) 341, 369, 464, 786, 1505
HphI GGTGA 3 cut(s) 211, 857, 1231
Hpy166II GTNNAC 5 cut(s) 211, 337, 517, 1241, 1649
Hpy188I TCNGA 5 cut(s) 313, 415, 735, 1981, 2181
Hpy188III TCNNGA 6 cut(s) 746, 786, 1288, 1317, 1385, 2212
Hpy8I GTNNAC 5 cut(s) 211, 337, 517, 1241, 1649
HpyAV CCTTC 7 cut(s) 340, 454, 1559, 1567, 1681, 2225, 2229
HpyCH4III ACNGT 4 cut(s) 101, 1476, 1511, 2273
HpyCH4IV ACGT 4 cut(s) 207, 213, 423, 1404
HpyF10VI GCNNNNNNNGC 9 cut(s) 48, 61, 365, 440, 449, 849, 1436, 1783, 2196
HpySE526I ACGT 4 cut(s) 207, 213, 423, 1404
HspAI GCGC 3 cut(s) 148, 156, 307
Kpn2I TCCGGA 1 cut(s) 785
KpnI GGTACC 1 cut(s) 2103
KroI GCCGGC 1 cut(s) 368
KroNI GCCGGC 1 cut(s) 370
Ksp22I TGATCA 4 cut(s) 271, 348, 415, 676
LguI GCTCTTC 1 cut(s) 2139
LmnI GCTCC 2 cut(s) 857, 951
Lsp1109I GCAGC 6 cut(s) 73, 313, 316, 1171, 1451, 1753
LweI GCATC 6 cut(s) 556, 579, 1071, 1357, 1929, 2137
MaeI CTAG 5 cut(s) 639, 966, 1062, 1652, 1728
MaeII ACGT 4 cut(s) 207, 213, 423, 1404
MaeIII GTNAC 6 cut(s) 101, 607, 625, 1210, 1513, 2140
MbiI CCGCTC 1 cut(s) 1643
MfeI CAATTG 1 cut(s) 816
MflI RGATCY 1 cut(s) 894
MhlI GDGCHC 1 cut(s) 474
MlyI GAGTC 2 cut(s) 497, 1592
MmeI TCCRAC 2 cut(s) 1959, 2208
Mph1103I ATGCAT 2 cut(s) 501, 1618
MroI TCCGGA 1 cut(s) 785
MroNI GCCGGC 1 cut(s) 368
MseI TTAA 6 cut(s) 317, 758, 902, 1167, 1179, 1721
MslI CAYNNNNRTG 3 cut(s) 224, 387, 1449
MspI CCGG 5 cut(s) 341, 369, 464, 786, 1505
MspR9I CCNGG 4 cut(s) 341, 464, 706, 1012
MunI CAATTG 1 cut(s) 816
Mva1269I GAATGC 3 cut(s) 372, 715, 1021
MvaI CCWGG 2 cut(s) 706, 1012
MvnI CGCG 2 cut(s) 148, 156
MwoI GCNNNNNNNGC 9 cut(s) 48, 61, 365, 440, 449, 849, 1436, 1783, 2196
NaeI GCCGGC 1 cut(s) 370
NciI CCSGG 2 cut(s) 341, 464
NcoI CCATGG 1 cut(s) 621
NgoMIV GCCGGC 1 cut(s) 368
NheI GCTAGC 1 cut(s) 1727
NlaIV GGNNCC 6 cut(s) 328, 953, 1252, 1692, 2101, 2267
NmeAIII GCCGAG 1 cut(s) 701
NmuCI GTSAC 1 cut(s) 101
NsiI ATGCAT 2 cut(s) 501, 1618
NspI RCATGY 5 cut(s) 1239, 1542, 1620, 1684, 1700
PaeI GCATGC 1 cut(s) 1684
PaqCI CACCTGC 1 cut(s) 1836
PciSI GCTCTTC 1 cut(s) 2139
PcsI WCGNNNNNNNCGW 1 cut(s) 330
PctI GAATGC 3 cut(s) 372, 715, 1021
PdiI GCCGGC 1 cut(s) 370
PfeI GAWTC 4 cut(s) 863, 1734, 1874, 2176
PflMI CCANNNNNTGG 2 cut(s) 1011, 1700
PfoI TCCNGGA 1 cut(s) 704
PkrI GCNGC 7 cut(s) 63, 303, 306, 361, 1186, 1441, 1768
PleI GAGTC 2 cut(s) 497, 1591
PpsI GAGTC 2 cut(s) 497, 1591
PshBI ATTAAT 1 cut(s) 1179
Psp6I CCWGG 2 cut(s) 704, 1010
PspFI CCCAGC 2 cut(s) 2030, 2190
PspGI CCWGG 2 cut(s) 704, 1010
PspN4I GGNNCC 6 cut(s) 328, 953, 1252, 1692, 2101, 2267
PspPI GGNCC 3 cut(s) 461, 1251, 1507
PsuI RGATCY 1 cut(s) 894
RsaI GTAC 4 cut(s) 236, 1343, 2036, 2101
RsaNI GTAC 4 cut(s) 235, 1342, 2035, 2100
RseI CAYNNNNRTG 3 cut(s) 224, 387, 1449
Rsr2I CGGWCCG 1 cut(s) 1507
RsrII CGGWCCG 1 cut(s) 1507
SapI GCTCTTC 1 cut(s) 2139
SaqAI TTAA 6 cut(s) 317, 758, 902, 1167, 1179, 1721
SatI GCNGC 7 cut(s) 62, 302, 305, 360, 1185, 1440, 1767
Sau96I GGNCC 3 cut(s) 461, 1251, 1507
ScaI AGTACT 1 cut(s) 236
SchI GAGTC 2 cut(s) 497, 1592
ScrFI CCNGG 4 cut(s) 341, 464, 706, 1012
SduI GDGCHC 1 cut(s) 474
SfaNI GCATC 6 cut(s) 556, 579, 1071, 1357, 1929, 2137
SinI GGWCC 1 cut(s) 1507
SmiMI CAYNNNNRTG 3 cut(s) 224, 387, 1449
SmlI CTYRAG 1 cut(s) 395
SmoI CTYRAG 1 cut(s) 395
SphI GCATGC 1 cut(s) 1684
SspMI CTAG 5 cut(s) 639, 966, 1062, 1652, 1728
StyD4I CCNGG 4 cut(s) 339, 462, 704, 1010
StyI CCWWGG 1 cut(s) 621
TaaI ACNGT 4 cut(s) 101, 1476, 1511, 2273
TaiI ACGT 4 cut(s) 210, 216, 426, 1407
TaqI TCGA 3 cut(s) 292, 582, 1639
TatI WGTACW 2 cut(s) 234, 1341
TauI GCSGC 1 cut(s) 362
TfiI GAWTC 4 cut(s) 863, 1734, 1874, 2176
Tru1I TTAA 6 cut(s) 317, 758, 902, 1167, 1179, 1721
Tru9I TTAA 6 cut(s) 317, 758, 902, 1167, 1179, 1721
TscAI CASTG 6 cut(s) 116, 122, 370, 2163, 2276, 2284
TseFI GTSAC 1 cut(s) 101
TseI GCWGC 6 cut(s) 61, 301, 304, 1184, 1439, 1766
Tsp45I GTSAC 1 cut(s) 101
TspDTI ATGAA 9 cut(s) 56, 794, 816, 816, 996, 1406, 1499, 1671, 1939
TspRI CASTG 6 cut(s) 116, 122, 370, 2163, 2276, 2284
Van91I CCANNNNNTGG 2 cut(s) 1011, 1700
VpaK11BI GGWCC 1 cut(s) 1507
VspI ATTAAT 1 cut(s) 1179
XapI RAATTY 2 cut(s) 681, 972
XceI RCATGY 5 cut(s) 1239, 1542, 1620, 1684, 1700
XmiI GTMKAC 1 cut(s) 336
XspI CTAG 5 cut(s) 639, 966, 1062, 1652, 1728
ZrmI AGTACT 1 cut(s) 236
Zsp2I ATGCAT 2 cut(s) 501, 1618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.