RchiOBHm_Chr7g0218681

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0006232
Physical Location & Seq
Reverse (-)
36816326 .. 36818967
2642 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19576

Sequence Viewer

Length: 2190 bp
ATGTCAGTCTTACACTTGGATAGCTTACTATGCAAAATAAGCAATGTGAGTCAGTTAAGGCAGCTCCATGCTCACCTCATTCAAAATTCCCTCCACCACCAAAACCAATGGGTGTCATTGCTCATCAACCAATGCACGCGCCTCCGTGCACCGCCGCCTTATACCCGTCTCATCTTCGACTCTACGCCTCGCCCCAACATCCATGTCTTCACCTCCATGCTCAAATATTACGCCCCTTTGGGCAATGTTTGCTCTAATCAAGTTGTTTCACTATATCAACTAATGCAGCGTTGCGAGGACGTATGTCTTGGTACCTTTGTGTACCCAGTTTTGATCAAATCGTCGGGCAGTGCCGGCATTGCGTTCCACGCGCATGTGGTGAAGTTGGGTCTTGGTTCAGATCATTATGTAAGCAATGCCATCATGAGTGTGTATTCGAAATATGGGCCGGTGGAGCATGCCCGAGACGTGTTCGATGAAATGCCTGAGAGGAGTCTGGTGGATTGGAACAACATGATTTCTGGGTATTGGAAGTGGGGGAATAAAGTTGAAGCGTGTAAACTGTTTGATATGATGCCTGAGAAGAGTGTTGTTACTTGGACTGCTATGGTTACCGGGTACGCTAGGATGAAGGATTTGGAGAATGCAAGAAGGTATTTTGATAATATTCCGGAGAAAAATGTGGTGTCGTGGAATGCAATGCTCTCGGCTTATGCTCAGAATGGATCTCCAGAGGAGGCTTTGAGATTGTTTGATGGCATGATGGATTCTGGAGACAAACCAAATGAAACTACATGGGCAATTGTCATTTCAGCGTGTTCGTCATGTGGTAATAGTTCCATTGCAGATTCGTTTATCCAAAAGCTCAACCAGAAGCGGATGCATTTAAGTTATTTTGGCAAAACTGCGATGCTTGATATGTATGCAAAGCGTGGGAGCATCAAGAAGCTCTTTGATAAGATGCCGGAAAGAGATGTTGTCTCATGGAACTCGATGATTTCTGGCTATGCTCAGAATGGACAGTCCGCTCTTGCAATTGATCTCTTCAAAGATATGACTGCTGCTGATAACCCCAAACCAAATGAAGTCACTATGGTCAGTGTCATCTCAGCATGTGGGCATCTTGGGGCATTGGAGATAGGTAATTGGGCCGTCAACTTTCTCACAAAACATCATACCAATCTAAGTATATCAGTATACAATTCTTTGATATTCTTGTACTCTAAATGTGGAAACATGGATGATGCCAAGAGAATATTCAACGAAATGAAACAACGAGATGTGGTTTCCTACAATACATTGATTTCAGGGTTTGCAGCTCATGGTCATGGAATGGAAGCTGTCAAGCTAAAGATGAAGATGAAAGAAGAATTTATTGAGCCAAACCGTGAAACGTATATTGGTATTCTGACAGCGTGCAGCCATGCTGGGTTGTTAGAAGAAGGTTGGAAGATCTTTGAGTCGATCAAAGATCCTGATGTAGATCATTATGCATGCGTGGTTGACTTATTAGGTCGAGTGGGTAAAGTGGATGAGGCAAAAAAAATAGTTGATGGCATGCAGAAAGAGCCACATGCTGGAGTTTATGGATCTATTTTAAATGCTAGCCGGATTCACAAAAGAATTGATCTTGGGGAGTTTGCTGCAAGCAAGCTCTTTGAGCTTGAACCACATAATTCAGGAAACTACATTTTGCTTTCGAACATATATGCCTCTGCAGGCAGGTGGGACGATGTGGTGAGAGTTAGAGAAGCTATGAGAAATGCAGGTGTGAAAAAGGCAACTGGTTGGAGTTGGGTGGAATACAATGGTAAGATGCACAAGTTCATTGCGGGAGACAGATCACACGAACTGTCAGATGAAATTTATACGCGATTGGCAGAATTAGGGAGGAAGCTGAGGAATGCTGGCTACATTGCTGATAAGGCCTGTGTGCTAAGAGATGTTGATGAGGAAGAGAAAGAAGAGATGGTGGGTACTCATAGTGAAAAATTGGCGGTATGCTTCGCTCTCCTTGTTACAGAAGCAAAGTCAGTGATTAGAGTGGTGAAGAATCTGAGGGTATGCAGGGATTGCCATACAGCTATTAAGATGATATCTAAGTTGGAAGGAAGGAAAATTATTTTGAGGGATAATAACAGGTTTCACCATTTCAGTGATGGGCAATGTTCTTGCGGGGACTATTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

729

Amino Acids

82.2

Weight (kDa)

8.14

Isoelectric Point (pI)

37.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 226 - 274 5.4e-13 PPR repeat family
PPR PF01535 229 - 258 1.1e-08 PPR repeat
PPR_2 PF13041 324 - 373 1.3e-10 PPR repeat family
PPR PF01535 327 - 353 3.4e-07 PPR repeat
PPR_2 PF13041 397 - 428 1e-06 PPR repeat family
PPR PF01535 399 - 427 1e-07 PPR repeat
PPR_2 PF13041 426 - 474 4.5e-11 PPR repeat family
PPR_3 PF13812 426 - 473 1e-06 Pentatricopeptide repeat domain
E_motif PF20431 539 - 601 4.2e-23 E motif
DYW_deaminase PF14432 637 - 729 3.4e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1713, 1757
Acc36I ACCTGC 2 cut(s) 1713, 1757
Acc65I GGTACC 1 cut(s) 311
AccB1I GGYRCC 1 cut(s) 311
AccB7I CCANNNNNTGG 1 cut(s) 1577
AccBSI CCGCTC 1 cut(s) 1028
AccI GTMKAC 1 cut(s) 1197
AccII CGCG 3 cut(s) 139, 371, 1873
AccIII TCCGGA 1 cut(s) 670
AciI CCGC 7 cut(s) 152, 155, 877, 1026, 1832, 1997, 2175
AclWI GGATC 3 cut(s) 733, 1466, 1597
AcsI RAATTY 3 cut(s) 85, 1370, 1863
AfaI GTAC 5 cut(s) 313, 323, 620, 1220, 1978
AfiI CCNNNNNNNGG 1 cut(s) 1577
AflIII ACRYGT 1 cut(s) 468
AgsI TTSAA 5 cut(s) 83, 551, 1048, 1261, 1667
AjiI CACGTC 1 cut(s) 469
AjuI GAANNNNNNNTTGG 4 cut(s) 1241, 1273, 1383, 1415
Alw21I GWGCWC 1 cut(s) 151
Alw26I GTCTC 5 cut(s) 173, 459, 768, 985, 1830
Alw44I GTGCAC 1 cut(s) 147
AlwI GGATC 3 cut(s) 733, 1466, 1597
Ama87I CYCGRG 1 cut(s) 462
Aor13HI TCCGGA 1 cut(s) 670
AoxI GGCC 3 cut(s) 446, 1149, 1926
ApaLI GTGCAC 1 cut(s) 147
ApeKI GCWGC 6 cut(s) 61, 286, 1061, 1316, 1419, 1643
ApoI RAATTY 3 cut(s) 85, 1370, 1863
Asp718I GGTACC 1 cut(s) 311
AspLEI GCGC 2 cut(s) 141, 373
AspS9I GGNCC 2 cut(s) 446, 1149
AsuC2I CCSGG 1 cut(s) 616
AsuHPI GGTGA 6 cut(s) 65, 202, 391, 1750, 2059, 2138
AsuII TTCGAA 2 cut(s) 437, 1700
AsuNHI GCTAGC 1 cut(s) 1604
AvaI CYCGRG 1 cut(s) 462
BaeGI GKGCMC 1 cut(s) 151
BaeI ACNNNNGTAYC 2 cut(s) 303, 336
BanI GGYRCC 1 cut(s) 311
BbsI GAAGAC 1 cut(s) 199
Bbv12I GWGCWC 1 cut(s) 151
BbvCI CCTCAGC 1 cut(s) 1898
BbvI GCAGC 6 cut(s) 73, 298, 1048, 1328, 1431, 1630
BccI CCATC 6 cut(s) 428, 749, 757, 1547, 1963, 2153
BceAI ACGGC 1 cut(s) 1136
BcgI CGANNNNNNTGC 2 cut(s) 687, 721
BclI TGATCA 1 cut(s) 333
BcnI CCSGG 1 cut(s) 616
BcoDI GTCTC 5 cut(s) 173, 459, 768, 985, 1830
BfaI CTAG 2 cut(s) 624, 1605
BfmI CTRYAG 1 cut(s) 1716
BfuAI ACCTGC 2 cut(s) 1713, 1757
BglII AGATCT 1 cut(s) 1452
BisI GCNGC 7 cut(s) 62, 155, 287, 1062, 1317, 1420, 1644
BlsI GCNGC 7 cut(s) 63, 156, 288, 1063, 1318, 1421, 1645
Bme1390I CCNGG 1 cut(s) 616
BmeT110I CYCGRG 1 cut(s) 462
BmgBI CACGTC 1 cut(s) 469
BmgT120I GGNCC 2 cut(s) 446, 1149
BmiI GGNNCC 1 cut(s) 313
BmrFI CCNGG 1 cut(s) 616
BmrI ACTGGG 1 cut(s) 320
BmsI GCATC 8 cut(s) 564, 870, 900, 948, 951, 1129, 1234, 1806
BmtI GCTAGC 1 cut(s) 1608
BmuI ACTGGG 1 cut(s) 320
BoxI GACNNNNGTC 1 cut(s) 303
BpiI GAAGAC 1 cut(s) 199
BpmI CTGGAG 3 cut(s) 714, 792, 1599
Bpu10I CCTNAGC 1 cut(s) 1898
Bpu14I TTCGAA 2 cut(s) 437, 1700
BpuMI CCSGG 1 cut(s) 616
BsaBI GATNNNNATC 1 cut(s) 1482
BsaWI WCCGGW 1 cut(s) 670
Bsc4I CCNNNNNNNGG 1 cut(s) 1577
Bse118I RCCGGY 2 cut(s) 353, 448
Bse1I ACTGG 2 cut(s) 326, 1789
Bse8I GATNNNNATC 1 cut(s) 1482
BseAI TCCGGA 1 cut(s) 670
BseGI GGATG 5 cut(s) 198, 633, 885, 1246, 1537
BseJI GATNNNNATC 1 cut(s) 1482
BseLI CCNNNNNNNGG 1 cut(s) 1577
BseMII CTCAG 7 cut(s) 477, 570, 731, 1025, 1122, 1889, 2048
BseNI ACTGG 2 cut(s) 326, 1789
BseRI GAGGAG 2 cut(s) 505, 749
BseSI GKGCMC 1 cut(s) 151
BseXI GCAGC 6 cut(s) 73, 298, 1048, 1328, 1431, 1630
BseYI CCCAGC 1 cut(s) 1427
BsgI GTGCAG 1 cut(s) 1438
Bsh1236I CGCG 3 cut(s) 139, 371, 1873
BshFI GGCC 3 cut(s) 448, 1151, 1928
BshNI GGYRCC 1 cut(s) 311
BsiHKAI GWGCWC 1 cut(s) 151
BsiHKCI CYCGRG 1 cut(s) 462
BsiSI CCGG 6 cut(s) 354, 449, 615, 671, 965, 1609
BslFI GGGAC 1 cut(s) 1742
BslI CCNNNNNNNGG 1 cut(s) 1577
BsmAI GTCTC 5 cut(s) 173, 459, 768, 985, 1830
BsmBI CGTCTC 2 cut(s) 173, 459
BsmFI GGGAC 1 cut(s) 1742
BsmI GAATGC 3 cut(s) 649, 700, 1909
BsnI GGCC 3 cut(s) 448, 1151, 1928
BsoBI CYCGRG 1 cut(s) 462
Bsp119I TTCGAA 2 cut(s) 437, 1700
Bsp1286I GDGCHC 1 cut(s) 151
Bsp13I TCCGGA 1 cut(s) 670
BspACI CCGC 7 cut(s) 152, 155, 877, 1026, 1832, 1997, 2175
BspANI GGCC 3 cut(s) 448, 1151, 1928
BspCNI CTCAG 7 cut(s) 478, 571, 730, 1024, 1121, 1890, 2049
BspEI TCCGGA 1 cut(s) 670
BspFNI CGCG 3 cut(s) 139, 371, 1873
BspHI TCATGA 1 cut(s) 423
BspLI GGNNCC 1 cut(s) 313
BspMAI CTGCAG 1 cut(s) 1720
BspMI ACCTGC 2 cut(s) 1713, 1757
BspOI GCTAGC 1 cut(s) 1608
BspPI GGATC 3 cut(s) 733, 1466, 1597
BspT104I TTCGAA 2 cut(s) 437, 1700
BspT107I GGYRCC 1 cut(s) 311
BsrBI CCGCTC 1 cut(s) 1028
BsrFI RCCGGY 2 cut(s) 353, 448
BsrI ACTGG 2 cut(s) 326, 1789
BssAI RCCGGY 2 cut(s) 353, 448
BssNAI GTATAC 1 cut(s) 1198
Bst1107I GTATAC 1 cut(s) 1198
Bst4CI ACNGT 4 cut(s) 564, 1023, 1388, 1854
Bst6I CTCTTC 4 cut(s) 578, 1049, 1950, 1959
BstAPI GCANNNNNTGC 2 cut(s) 249, 2073
BstBI TTCGAA 2 cut(s) 437, 1700
BstEII GGTNACC 1 cut(s) 610
BstF5I GGATG 5 cut(s) 198, 633, 885, 1246, 1537
BstFNI CGCG 3 cut(s) 139, 371, 1873
BstHHI GCGC 2 cut(s) 141, 373
BstMAI GTCTC 5 cut(s) 173, 459, 768, 985, 1830
BstNSI RCATGY 6 cut(s) 377, 461, 1116, 1497, 1561, 1577
BstPAI GACNNNNGTC 1 cut(s) 303
BstPI GGTNACC 1 cut(s) 610
BstSCI CCNGG 1 cut(s) 614
BstSFI CTRYAG 1 cut(s) 1716
BstSLI GKGCMC 1 cut(s) 151
BstUI CGCG 3 cut(s) 139, 371, 1873
BstV1I GCAGC 6 cut(s) 73, 298, 1048, 1328, 1431, 1630
BstV2I GAAGAC 1 cut(s) 199
BstX2I RGATCY 4 cut(s) 725, 1452, 1471, 1589
BstYI RGATCY 4 cut(s) 725, 1452, 1471, 1589
BstZ17I GTATAC 1 cut(s) 1198
BsuRI GGCC 3 cut(s) 448, 1151, 1928
BtgZI GCGATG 1 cut(s) 923
BtrI CACGTC 1 cut(s) 469
BtsCI GGATG 5 cut(s) 198, 633, 885, 1246, 1537
BtsI GCAGTG 1 cut(s) 355
BtsIMutI CAGTG 4 cut(s) 355, 1105, 2040, 2161
BveI ACCTGC 2 cut(s) 1713, 1757
CciI TCATGA 1 cut(s) 423
CfoI GCGC 2 cut(s) 141, 373
Cfr10I RCCGGY 2 cut(s) 353, 448
Cfr13I GGNCC 2 cut(s) 446, 1149
Csp6I GTAC 5 cut(s) 312, 322, 619, 1219, 1977
CviQI GTAC 5 cut(s) 312, 322, 619, 1219, 1977
DraI TTTAAA 1 cut(s) 1599
Eam1104I CTCTTC 4 cut(s) 578, 1049, 1950, 1959
EarI CTCTTC 4 cut(s) 578, 1049, 1950, 1959
Eco147I AGGCCT 1 cut(s) 1928
Eco32I GATATC 1 cut(s) 2097
Eco88I CYCGRG 1 cut(s) 462
Eco91I GGTNACC 1 cut(s) 610
EcoO65I GGTNACC 1 cut(s) 610
EcoRV GATATC 1 cut(s) 2097
EcoT22I ATGCAT 2 cut(s) 885, 1495
Esp3I CGTCTC 2 cut(s) 173, 459
FalI AAGNNNNNCTT 2 cut(s) 935, 967
FaqI GGGAC 1 cut(s) 1742
FauI CCCGC 2 cut(s) 1825, 2168
FbaI TGATCA 1 cut(s) 333
FblI GTMKAC 1 cut(s) 1197
Fnu4HI GCNGC 7 cut(s) 62, 155, 287, 1062, 1317, 1420, 1644
FokI GGATG 5 cut(s) 185, 640, 892, 1253, 1544
Fsp4HI GCNGC 7 cut(s) 62, 155, 287, 1062, 1317, 1420, 1644
FspBI CTAG 2 cut(s) 624, 1605
GlaI GCGC 2 cut(s) 140, 372
GluI GCNGC 7 cut(s) 62, 155, 287, 1062, 1317, 1420, 1644
GsaI CCCAGC 1 cut(s) 1431
GsuI CTGGAG 3 cut(s) 714, 792, 1599
HaeIII GGCC 3 cut(s) 448, 1151, 1928
HapII CCGG 6 cut(s) 354, 449, 615, 671, 965, 1609
HhaI GCGC 2 cut(s) 141, 373
Hin6I GCGC 2 cut(s) 139, 371
HinP1I GCGC 2 cut(s) 139, 371
HincII GTYRAC 2 cut(s) 1156, 1504
HindII GTYRAC 2 cut(s) 1156, 1504
HinfI GANTC 8 cut(s) 49, 179, 493, 767, 848, 1460, 1612, 2053
HpaII CCGG 6 cut(s) 354, 449, 615, 671, 965, 1609
HphI GGTGA 6 cut(s) 65, 202, 391, 1750, 2059, 2138
Hpy166II GTNNAC 6 cut(s) 149, 322, 560, 1156, 1198, 1504
Hpy188I TCNGA 6 cut(s) 400, 720, 1014, 1410, 1858, 2058
Hpy188III TCNNGA 7 cut(s) 424, 671, 731, 771, 943, 1475, 1680
Hpy8I GTNNAC 6 cut(s) 149, 322, 560, 1156, 1198, 1504
Hpy99I CGWCG 1 cut(s) 346
HpyAV CCTTC 5 cut(s) 625, 645, 1436, 2102, 2106
HpyCH4III ACNGT 4 cut(s) 564, 1023, 1388, 1854
HpyCH4IV ACGT 3 cut(s) 300, 468, 1394
HpySE526I ACGT 3 cut(s) 300, 468, 1394
HspAI GCGC 2 cut(s) 139, 371
Kpn2I TCCGGA 1 cut(s) 670
KpnI GGTACC 1 cut(s) 315
KroI GCCGGC 1 cut(s) 353
KroNI GCCGGC 1 cut(s) 355
Ksp22I TGATCA 1 cut(s) 333
LmnI GCTCC 3 cut(s) 69, 454, 936
Lsp1109I GCAGC 6 cut(s) 73, 298, 1048, 1328, 1431, 1630
LweI GCATC 8 cut(s) 564, 870, 900, 948, 951, 1129, 1234, 1806
MaeI CTAG 2 cut(s) 624, 1605
MaeII ACGT 3 cut(s) 300, 468, 1394
MaeIII GTNAC 4 cut(s) 592, 610, 1087, 2017
MbiI CCGCTC 1 cut(s) 1028
MfeI CAATTG 2 cut(s) 801, 1035
MflI RGATCY 4 cut(s) 725, 1452, 1471, 1589
MhlI GDGCHC 1 cut(s) 151
MlyI GAGTC 4 cut(s) 58, 173, 502, 1469
MmeI TCCRAC 3 cut(s) 1427, 1769, 2085
Mph1103I ATGCAT 2 cut(s) 885, 1495
MroI TCCGGA 1 cut(s) 670
MroNI GCCGGC 1 cut(s) 353
MseI TTAA 4 cut(s) 56, 887, 1598, 2088
MslI CAYNNNNRTG 5 cut(s) 215, 372, 428, 1326, 2154
MspI CCGG 6 cut(s) 354, 449, 615, 671, 965, 1609
MspR9I CCNGG 1 cut(s) 616
MunI CAATTG 2 cut(s) 801, 1035
Mva1269I GAATGC 3 cut(s) 649, 700, 1909
MvnI CGCG 3 cut(s) 139, 371, 1873
NaeI GCCGGC 1 cut(s) 355
NciI CCSGG 1 cut(s) 616
NgoMIV GCCGGC 1 cut(s) 353
NheI GCTAGC 1 cut(s) 1604
NlaIV GGNNCC 1 cut(s) 313
NmeAIII GCCGAG 1 cut(s) 686
NmuCI GTSAC 1 cut(s) 1087
NsiI ATGCAT 2 cut(s) 885, 1495
NspI RCATGY 6 cut(s) 377, 461, 1116, 1497, 1561, 1577
NspV TTCGAA 2 cut(s) 437, 1700
PaeI GCATGC 3 cut(s) 461, 1497, 1561
PagI TCATGA 1 cut(s) 423
PaqCI CACCTGC 2 cut(s) 1713, 1757
PceI AGGCCT 1 cut(s) 1928
PctI GAATGC 3 cut(s) 649, 700, 1909
PdiI GCCGGC 1 cut(s) 355
PfeI GAWTC 4 cut(s) 767, 848, 1612, 2053
PflMI CCANNNNNTGG 1 cut(s) 1577
PkrI GCNGC 7 cut(s) 63, 156, 288, 1063, 1318, 1421, 1645
PleI GAGTC 4 cut(s) 57, 173, 501, 1468
PpsI GAGTC 4 cut(s) 57, 173, 501, 1468
PshAI GACNNNNGTC 1 cut(s) 303
PspEI GGTNACC 1 cut(s) 610
PspFI CCCAGC 1 cut(s) 1427
PspN4I GGNNCC 1 cut(s) 313
PspPI GGNCC 2 cut(s) 446, 1149
PstI CTGCAG 1 cut(s) 1720
PsuI RGATCY 4 cut(s) 725, 1452, 1471, 1589
RsaI GTAC 5 cut(s) 313, 323, 620, 1220, 1978
RsaNI GTAC 5 cut(s) 312, 322, 619, 1219, 1977
RseI CAYNNNNRTG 5 cut(s) 215, 372, 428, 1326, 2154
SaqAI TTAA 4 cut(s) 56, 887, 1598, 2088
SatI GCNGC 7 cut(s) 62, 155, 287, 1062, 1317, 1420, 1644
Sau96I GGNCC 2 cut(s) 446, 1149
SchI GAGTC 4 cut(s) 58, 173, 502, 1469
ScrFI CCNGG 1 cut(s) 616
SduI GDGCHC 1 cut(s) 151
SfaNI GCATC 8 cut(s) 564, 870, 900, 948, 951, 1129, 1234, 1806
SfcI CTRYAG 1 cut(s) 1716
SfuI TTCGAA 2 cut(s) 437, 1700
SmiMI CAYNNNNRTG 5 cut(s) 215, 372, 428, 1326, 2154
SphI GCATGC 3 cut(s) 461, 1497, 1561
SseBI AGGCCT 1 cut(s) 1928
SsiI CCGC 7 cut(s) 152, 155, 877, 1026, 1832, 1997, 2175
SspI AATATT 3 cut(s) 227, 667, 1257
SspMI CTAG 2 cut(s) 624, 1605
StuI AGGCCT 1 cut(s) 1928
StyD4I CCNGG 1 cut(s) 614
TaaI ACNGT 4 cut(s) 564, 1023, 1388, 1854
TaiI ACGT 3 cut(s) 303, 471, 1397
TaqI TCGA 7 cut(s) 177, 437, 474, 992, 1463, 1516, 1700
TatI WGTACW 1 cut(s) 1218
TauI GCSGC 1 cut(s) 157
TfiI GAWTC 4 cut(s) 767, 848, 1612, 2053
Tru1I TTAA 4 cut(s) 56, 887, 1598, 2088
Tru9I TTAA 4 cut(s) 56, 887, 1598, 2088
TscAI CASTG 4 cut(s) 355, 1105, 2040, 2161
TseFI GTSAC 1 cut(s) 1087
TseI GCWGC 6 cut(s) 61, 286, 1061, 1316, 1419, 1643
Tsp45I GTSAC 1 cut(s) 1087
TspDTI ATGAA 9 cut(s) 492, 644, 801, 1098, 1283, 1370, 1376, 1816, 1875
TspGWI ACGGA 1 cut(s) 134
TspRI CASTG 4 cut(s) 355, 1105, 2040, 2161
Van91I CCANNNNNTGG 1 cut(s) 1577
VneI GTGCAC 1 cut(s) 147
XapI RAATTY 3 cut(s) 85, 1370, 1863
XceI RCATGY 6 cut(s) 377, 461, 1116, 1497, 1561, 1577
XcmI CCANNNNNNNNNTGG 1 cut(s) 2156
XmiI GTMKAC 1 cut(s) 1197
XspI CTAG 2 cut(s) 624, 1605
Zsp2I ATGCAT 2 cut(s) 885, 1495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.