Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005784.1

Orthogroup ID

OG0006232

Physical Location & Seq

Genomic Coordinates Forward (+)

72276 .. 76182

Gene Structure 3907 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005784.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

atgatgctgcagccccgctcagacctcgacagcgacgctaatagggccggaagcatcccagacagcttttggacagcaatcgaggtcggaggaggtcgaggttgtaggtttctgggcagcaacctcacctgcaacctcgtcgtcggcgactccacccgactgcagactgcggaggcgttccaagcggcgacgacggcgcgcggcttgcaggaaggaggccgaaggcatctcggactgttctgggcagcgttcgtggtcggaggaggtcggggttgcaagttttctgggcagccctacaacgacttcgccggctactccactgactgcagacctctctgtctgacccctggcgtccttccggcaacccccgccgatccgtcacaccccgagcagagctgcagcgtcgctgtcggcactttagcaaaattaaggcagctccatgcccacctcattcaaaattccctccaccaccaaaaccaatgggtgtcattgctcatcaaccaatgcacacgcctccgtgcaccgccgccttatactcgtctcatcttcgactctacgccttgccccaacatccatgtcttcacctccatgctcaaatattacgcccctttgggcaatgttttctctaatcaagttgtttcactatatcaactaatgcagcgttgcgaggacgtatgtcttggtacctttgtgtacccagttttgatcaaatcgtccggcagtgctggcattgcgttccacgctcatgtagtgaagttgggtcttggttctgatcattatgttcgcaatgccatcatgagcgtgtattcgaaatatgggccggttgagcatgcccgagacgtgttcgatgaaatgcctgagaggagtcttgtggattggaacaacatgatttctgggtattggaagtgggggaataaagttgaagcgtgtaaactgtttgatatgatgcctgagaagagtgttgttacttggactgctatggttaccgggtacgctaggatgaaggatttggagaatgcaagaaggtattttgataatattccggagaaaaatgtggtgtcgtggaatgcaatgctctcggcttatgctcagaatggatctccagaggagactttgagattgtttgatggcatgatggattctggagataaaccaaatgaaactacatgggcaattgtcatttcagcgtgttcgtcatgtggtaatagttccattgcagattcgtttatccaaaagctcaaccagaagcggatgcatttaagttattttggcaaaactgcgatgcttgatatgtatgcaaagcgtgggagcatcaagagtgctagagaagtttttgatgaattgggggtgtataagagctctgggacttggaatgccatgatatcagcatatgcaagagttgggaatttgacttcagctagagagctctttgataagatgccggaaagagatgttgtctcatggaactcgatgatttctggctatgctcagaatggacagtccactattgcaattgatctcttcaaagatatgactgctgctgataaccccaaaccaaatgaagtcactatggtcagtgtcatctcagcatgtgggcatcttggggcattggagataggtaattgggctgtcaactttctcacaaaacatcataccaatctaagtatatcagtatacaattctttgatattcttgtactctaaatgtggaagcatggatgatgcaaagagaatattcaacgaaatgagaaaacgagacgtggtttcctacaatacattgatttcagggtttgcggctcatggtcagggaatggaagctgtcaagctaatggtgaagttgaaagaaaaatttattgaaccaaaccgtgaaacatatataggtcgagtgggtaaagtggatgaggcaaaaaaaatagttgatggcatgcagaaagagccacatgctggagtttatggatctcttttaaatgctagccggattcacaaaaggattgatcttggggagtttgctgcaagcaagctctttgagcttgaaccacataattcaggaaactacattttgctttcgaacatatatgcctctgcaggcagctgggacgatgtggtgagagttagagaagcaatgagaaatgcaggtgtgaaaaaggcaactggttggagttgggtggaatacaatggtaagatgcacaagttcattgcgggagacagatcacacgaactgtcagatgaaatttataggcgattggctgaattagggaggaagctgaggaatgctggctacattgctgataaggcctgtgtgctaagagatgttgatgaggaagagaaagaagagatggtgggtactcatagtgaaaaattggcggtatgcttcgctcttcttgttacagaagcaaagtcagtgattagagtggtgaagaatctgagggtgtgcagggattgccatacagctattaagatgatatctaagttggaaggaaggaaaattattttgagggataataacaggtttcaccatttcagtgatgggcaatgttcttgcggagagtattggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

851

Amino Acids

94.9

Weight (kDa)

8.6

Isoelectric Point (pI)

35.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14470
fragaria_vesca	FvH4_5g27410
malus_domestica	MD08G1249600.v1.1
prunus_persica	Prupe.1G586800_v2.0.a1
pyrus_communis	pycom08g21600
rosa_chinensis	RchiOBHm_Chr7g0218681 RchiOBHm_Chr7g0218851 RchiOBHm_Chr7g0218861
rosa_laevigata	RLG00000002332 RLG00000002335 RLG00000002336
rosa_multiflora	Rmu_co8331561.1_g000001 Rmu_sc0001301.1_g000001 Rmu_sc0001301.1_g000015 Rmu_sc0005784.1_g000011 Rmu_sc0005784.1_g000017
rosa_roxburghii	Rroxscaffold_3G00240390
rosa_rugosa	Rorug07G0179200 Rorug07G0179200
rosa_samantha	Rh7AG320400 Rh7AG322500 Rh7BG313200 Rh7BG313500 Rh7CG337300 Rh7CG339300
rosa_wichuraiana	Rw7G026900 Rw7G027290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	137, 2123
AasI	GACNNNNNNGTC	1 cut(s)	336
Acc36I	ACCTGC	2 cut(s)	137, 2123
Acc65I	GGTACC	1 cut(s)	683
AccB1I	GGYRCC	1 cut(s)	683
AccB7I	CCANNNNNTGG	1 cut(s)	1943
AccBSI	CCGCTC	1 cut(s)	18
AccI	GTMKAC	1 cut(s)	1674
AccII	CGCG	2 cut(s)	199, 201
AccIII	TCCGGA	1 cut(s)	1042
AclWI	GGATC	3 cut(s)	368, 1105, 1963
AcsI	RAATTY	4 cut(s)	457, 1405, 1847, 2229
AcuI	CTGAAG	1 cut(s)	1398
AcyI	GRCGYC	1 cut(s)	351
AfaI	GTAC	5 cut(s)	685, 695, 992, 1697, 2344
AfiI	CCNNNNNNNGG	1 cut(s)	1943
AflIII	ACRYGT	1 cut(s)	840
AgsI	TTSAA	7 cut(s)	455, 923, 1525, 1738, 1840, 1856, 2033
AjiI	CACGTC	2 cut(s)	841, 1759
AjnI	CCWGG	1 cut(s)	346
Alw21I	GWGCWC	3 cut(s)	523, 1361, 1428
Alw26I	GTCTC	6 cut(s)	545, 831, 1103, 1462, 1749, 2196
Alw44I	GTGCAC	1 cut(s)	519
AlwI	GGATC	3 cut(s)	368, 1105, 1963
Ama87I	CYCGRG	2 cut(s)	386, 834
Aor13HI	TCCGGA	1 cut(s)	1042
AoxI	GGCC	4 cut(s)	45, 217, 818, 2292
ApaLI	GTGCAC	1 cut(s)	519
ApoI	RAATTY	4 cut(s)	457, 1405, 1847, 2229
Asp718I	GGTACC	1 cut(s)	683
AspLEI	GCGC	2 cut(s)	199, 201
AspS9I	GGNCC	2 cut(s)	45, 818
AsuC2I	CCSGG	1 cut(s)	988
AsuHPI	GGTGA	6 cut(s)	118, 574, 1843, 2116, 2425, 2504
AsuII	TTCGAA	2 cut(s)	809, 2066
AsuNHI	GCTAGC	1 cut(s)	1970
AvaI	CYCGRG	2 cut(s)	386, 834
BaeGI	GKGCMC	1 cut(s)	523
BaeI	ACNNNNGTAYC	2 cut(s)	675, 708
BanI	GGYRCC	1 cut(s)	683
BanII	GRGCYC	2 cut(s)	1361, 1428
BbsI	GAAGAC	1 cut(s)	571
Bbv12I	GWGCWC	3 cut(s)	523, 1361, 1428
BbvCI	CCTCAGC	1 cut(s)	2264
BccI	CCATC	6 cut(s)	800, 1121, 1129, 1913, 2329, 2519
BceAI	ACGGC	1 cut(s)	210
BcgI	CGANNNNNNTGC	4 cut(s)	121, 155, 1059, 1093
BciT130I	CCWGG	1 cut(s)	348
BclI	TGATCA	2 cut(s)	705, 772
BcnI	CCSGG	1 cut(s)	988
BcoDI	GTCTC	6 cut(s)	545, 831, 1103, 1462, 1749, 2196
BfaI	CTAG	4 cut(s)	996, 1323, 1419, 1971
BfmI	CTRYAG	5 cut(s)	8, 161, 325, 397, 2082
BfuAI	ACCTGC	2 cut(s)	137, 2123
Bme1390I	CCNGG	2 cut(s)	348, 988
BmeT110I	CYCGRG	2 cut(s)	386, 834
BmgBI	CACGTC	2 cut(s)	841, 1759
BmgT120I	GGNCC	2 cut(s)	45, 818
BmiI	GGNNCC	1 cut(s)	685
BmrFI	CCNGG	2 cut(s)	348, 988
BmrI	ACTGGG	1 cut(s)	692
BmtI	GCTAGC	1 cut(s)	1974
BmuI	ACTGGG	1 cut(s)	692
BoxI	GACNNNNGTC	1 cut(s)	675
BpiI	GAAGAC	1 cut(s)	571
BpmI	CTGGAG	3 cut(s)	1086, 1164, 1965
Bpu10I	CCTNAGC	1 cut(s)	2264
Bpu14I	TTCGAA	2 cut(s)	809, 2066
BpuMI	CCSGG	1 cut(s)	988
BsaHI	GRCGYC	1 cut(s)	351
BsaJI	CCNNGG	1 cut(s)	346
BsaWI	WCCGGW	1 cut(s)	1042
Bsc4I	CCNNNNNNNGG	1 cut(s)	1943
Bse118I	RCCGGY	2 cut(s)	308, 820
Bse1I	ACTGG	2 cut(s)	698, 2155
BseAI	TCCGGA	1 cut(s)	1042
BseBI	CCWGG	1 cut(s)	348
BseDI	CCNNGG	1 cut(s)	346
BseGI	GGATG	6 cut(s)	54, 570, 1005, 1257, 1723, 1903
BseLI	CCNNNNNNNGG	1 cut(s)	1943
BseMII	CTCAG	8 cut(s)	33, 849, 942, 1103, 1502, 1599, 2255, 2414
BseNI	ACTGG	2 cut(s)	698, 2155
BsePI	GCGCGC	1 cut(s)	197
BseRI	GAGGAG	4 cut(s)	105, 276, 877, 1121
BseSI	GKGCMC	1 cut(s)	523
BseYI	CCCAGC	1 cut(s)	2091
BsgI	GTGCAG	1 cut(s)	2452
Bsh1236I	CGCG	2 cut(s)	199, 201
BshFI	GGCC	4 cut(s)	47, 219, 820, 2294
BshNI	GGYRCC	1 cut(s)	683
BsiHKAI	GWGCWC	3 cut(s)	523, 1361, 1428
BsiHKCI	CYCGRG	2 cut(s)	386, 834
BsiSI	CCGG	9 cut(s)	48, 309, 359, 717, 821, 987, 1043, 1442, 1975
BslFI	GGGAC	2 cut(s)	1378, 2108
BslI	CCNNNNNNNGG	1 cut(s)	1943
BsmAI	GTCTC	6 cut(s)	545, 831, 1103, 1462, 1749, 2196
BsmBI	CGTCTC	3 cut(s)	545, 831, 1749
BsmFI	GGGAC	2 cut(s)	1378, 2108
BsmI	GAATGC	4 cut(s)	1021, 1072, 1378, 2275
BsnI	GGCC	4 cut(s)	47, 219, 820, 2294
BsoBI	CYCGRG	2 cut(s)	386, 834
Bsp119I	TTCGAA	2 cut(s)	809, 2066
Bsp1286I	GDGCHC	3 cut(s)	523, 1361, 1428
Bsp13I	TCCGGA	1 cut(s)	1042
Bsp143I	GATC	8 cut(s)	373, 705, 772, 1097, 1516, 1955, 1993, 2207
BspANI	GGCC	4 cut(s)	47, 219, 820, 2294
BspCNI	CTCAG	8 cut(s)	32, 850, 943, 1102, 1501, 1598, 2256, 2415
BspEI	TCCGGA	1 cut(s)	1042
BspFNI	CGCG	2 cut(s)	199, 201
BspHI	TCATGA	1 cut(s)	795
BspLI	GGNNCC	1 cut(s)	685
BspMAI	CTGCAG	5 cut(s)	12, 165, 329, 401, 2086
BspMI	ACCTGC	2 cut(s)	137, 2123
BspOI	GCTAGC	1 cut(s)	1974
BspPI	GGATC	3 cut(s)	368, 1105, 1963
BspQI	GCTCTTC	1 cut(s)	2382
BspT104I	TTCGAA	2 cut(s)	809, 2066
BspT107I	GGYRCC	1 cut(s)	683
BsrBI	CCGCTC	1 cut(s)	18
BsrFI	RCCGGY	2 cut(s)	308, 820
BsrI	ACTGG	2 cut(s)	698, 2155
BssAI	RCCGGY	2 cut(s)	308, 820
BssECI	CCNNGG	1 cut(s)	346
BssHII	GCGCGC	1 cut(s)	197
BssMI	GATC	8 cut(s)	373, 705, 772, 1097, 1516, 1955, 1993, 2207
BssNAI	GTATAC	1 cut(s)	1675
BssNI	GRCGYC	1 cut(s)	351
Bst1107I	GTATAC	1 cut(s)	1675
Bst2UI	CCWGG	1 cut(s)	348
Bst4CI	ACNGT	5 cut(s)	237, 936, 1500, 1865, 2220
Bst6I	CTCTTC	5 cut(s)	950, 1526, 2316, 2325, 2382
BstACI	GRCGYC	1 cut(s)	351
BstAPI	GCANNNNNTGC	1 cut(s)	2439
BstBI	TTCGAA	2 cut(s)	809, 2066
BstEII	GGTNACC	1 cut(s)	982
BstF5I	GGATG	6 cut(s)	54, 570, 1005, 1257, 1723, 1903
BstFNI	CGCG	2 cut(s)	199, 201
BstHHI	GCGC	2 cut(s)	199, 201
BstKTI	GATC	8 cut(s)	376, 708, 775, 1100, 1519, 1958, 1996, 2210
BstMAI	GTCTC	6 cut(s)	545, 831, 1103, 1462, 1749, 2196
BstMBI	GATC	8 cut(s)	373, 705, 772, 1097, 1516, 1955, 1993, 2207
BstNI	CCWGG	1 cut(s)	348
BstNSI	RCATGY	4 cut(s)	833, 1593, 1927, 1943
BstPAI	GACNNNNGTC	1 cut(s)	675
BstPI	GGTNACC	1 cut(s)	982
BstSCI	CCNGG	2 cut(s)	346, 986
BstSFI	CTRYAG	5 cut(s)	8, 161, 325, 397, 2082
BstSLI	GKGCMC	1 cut(s)	523
BstUI	CGCG	2 cut(s)	199, 201
BstV2I	GAAGAC	1 cut(s)	571
BstX2I	RGATCY	2 cut(s)	1097, 1955
BstYI	RGATCY	2 cut(s)	1097, 1955
BstZ17I	GTATAC	1 cut(s)	1675
BsuRI	GGCC	4 cut(s)	47, 219, 820, 2294
BtgZI	GCGATG	1 cut(s)	1295
BtrI	CACGTC	2 cut(s)	841, 1759
BtsCI	GGATG	6 cut(s)	54, 570, 1005, 1257, 1723, 1903
BtsI	GCAGTG	1 cut(s)	727
BtsIMutI	CAGTG	5 cut(s)	318, 727, 1582, 2406, 2527
BveI	ACCTGC	2 cut(s)	137, 2123
CciI	TCATGA	1 cut(s)	795
CfoI	GCGC	2 cut(s)	199, 201
Cfr10I	RCCGGY	2 cut(s)	308, 820
Cfr13I	GGNCC	2 cut(s)	45, 818
CseI	GACGC	3 cut(s)	44, 340, 391
Csp6I	GTAC	5 cut(s)	684, 694, 991, 1696, 2343
CviQI	GTAC	5 cut(s)	684, 694, 991, 1696, 2343
DpnI	GATC	8 cut(s)	375, 707, 774, 1099, 1518, 1957, 1995, 2209
DpnII	GATC	8 cut(s)	373, 705, 772, 1097, 1516, 1955, 1993, 2207
DraI	TTTAAA	1 cut(s)	1965
DrdI	GACNNNNNNGTC	1 cut(s)	336
DseDI	GACNNNNNNGTC	1 cut(s)	336
Eam1104I	CTCTTC	5 cut(s)	950, 1526, 2316, 2325, 2382
EarI	CTCTTC	5 cut(s)	950, 1526, 2316, 2325, 2382
Ecl136II	GAGCTC	2 cut(s)	1359, 1426
Eco147I	AGGCCT	1 cut(s)	2294
Eco24I	GRGCYC	2 cut(s)	1361, 1428
Eco32I	GATATC	2 cut(s)	1383, 2463
Eco53kI	GAGCTC	2 cut(s)	1359, 1426
Eco57I	CTGAAG	1 cut(s)	1398
Eco88I	CYCGRG	2 cut(s)	386, 834
Eco91I	GGTNACC	1 cut(s)	982
EcoICRI	GAGCTC	2 cut(s)	1359, 1426
EcoO65I	GGTNACC	1 cut(s)	982
EcoRII	CCWGG	1 cut(s)	346
EcoRV	GATATC	2 cut(s)	1383, 2463
EcoT22I	ATGCAT	1 cut(s)	1257
EcoT38I	GRGCYC	2 cut(s)	1361, 1428
Esp3I	CGTCTC	3 cut(s)	545, 831, 1749
FaqI	GGGAC	2 cut(s)	1378, 2108
FauI	CCCGC	3 cut(s)	23, 376, 2191
FauNDI	CATATG	1 cut(s)	1390
FbaI	TGATCA	2 cut(s)	705, 772
FblI	GTMKAC	1 cut(s)	1674
FokI	GGATG	6 cut(s)	41, 557, 1012, 1264, 1730, 1910
FriOI	GRGCYC	2 cut(s)	1361, 1428
FspBI	CTAG	4 cut(s)	996, 1323, 1419, 1971
GlaI	GCGC	2 cut(s)	198, 200
GsaI	CCCAGC	1 cut(s)	2095
GsuI	CTGGAG	3 cut(s)	1086, 1164, 1965
HaeIII	GGCC	4 cut(s)	47, 219, 820, 2294
HapII	CCGG	9 cut(s)	48, 309, 359, 717, 821, 987, 1043, 1442, 1975
HgaI	GACGC	3 cut(s)	44, 340, 391
HhaI	GCGC	2 cut(s)	199, 201
Hin1I	GRCGYC	1 cut(s)	351
Hin6I	GCGC	2 cut(s)	197, 199
HinP1I	GCGC	2 cut(s)	197, 199
HincII	GTYRAC	1 cut(s)	1633
HindII	GTYRAC	1 cut(s)	1633
HinfI	GANTC	7 cut(s)	149, 551, 865, 1139, 1220, 1978, 2419
HpaII	CCGG	9 cut(s)	48, 309, 359, 717, 821, 987, 1043, 1442, 1975
HphI	GGTGA	6 cut(s)	118, 574, 1843, 2116, 2425, 2504
Hpy166II	GTNNAC	6 cut(s)	521, 694, 932, 1503, 1633, 1675
Hpy188III	TCNNGA	6 cut(s)	796, 1043, 1103, 1143, 1315, 2046
Hpy8I	GTNNAC	6 cut(s)	521, 694, 932, 1503, 1633, 1675
Hpy99I	CGWCG	6 cut(s)	38, 143, 146, 193, 196, 407
HpyAV	CCTTC	7 cut(s)	206, 216, 365, 997, 1017, 2468, 2472
HpyCH4III	ACNGT	5 cut(s)	237, 936, 1500, 1865, 2220
HpyCH4IV	ACGT	3 cut(s)	672, 840, 1758
HpySE526I	ACGT	3 cut(s)	672, 840, 1758
Hsp92I	GRCGYC	1 cut(s)	351
HspAI	GCGC	2 cut(s)	197, 199
Kpn2I	TCCGGA	1 cut(s)	1042
KpnI	GGTACC	1 cut(s)	687
KroI	GCCGGC	1 cut(s)	308
KroNI	GCCGGC	1 cut(s)	310
Ksp22I	TGATCA	2 cut(s)	705, 772
Kzo9I	GATC	8 cut(s)	373, 705, 772, 1097, 1516, 1955, 1993, 2207
LguI	GCTCTTC	1 cut(s)	2382
LmnI	GCTCC	2 cut(s)	441, 1308
MaeI	CTAG	4 cut(s)	996, 1323, 1419, 1971
MaeII	ACGT	3 cut(s)	672, 840, 1758
MaeIII	GTNAC	5 cut(s)	378, 964, 982, 1564, 2383
MalI	GATC	8 cut(s)	375, 707, 774, 1099, 1518, 1957, 1995, 2209
MbiI	CCGCTC	1 cut(s)	18
MboI	GATC	8 cut(s)	373, 705, 772, 1097, 1516, 1955, 1993, 2207
MboII	GAAGA	8 cut(s)	538, 571, 967, 1513, 2333, 2342, 2369, 2428
MfeI	CAATTG	2 cut(s)	1173, 1512
MflI	RGATCY	2 cut(s)	1097, 1955
MhlI	GDGCHC	3 cut(s)	523, 1361, 1428
MlyI	GAGTC	3 cut(s)	143, 545, 874
MmeI	TCCRAC	4 cut(s)	67, 238, 2135, 2451
Mph1103I	ATGCAT	1 cut(s)	1257
MroI	TCCGGA	1 cut(s)	1042
MroNI	GCCGGC	1 cut(s)	308
MseI	TTAA	4 cut(s)	428, 1259, 1964, 2454
MslI	CAYNNNNRTG	4 cut(s)	587, 744, 800, 2520
MspA1I	CMGCKG	1 cut(s)	2091
MspI	CCGG	9 cut(s)	48, 309, 359, 717, 821, 987, 1043, 1442, 1975
MspR9I	CCNGG	2 cut(s)	348, 988
MunI	CAATTG	2 cut(s)	1173, 1512
Mva1269I	GAATGC	4 cut(s)	1021, 1072, 1378, 2275
MvaI	CCWGG	1 cut(s)	348
MvnI	CGCG	2 cut(s)	199, 201
NaeI	GCCGGC	1 cut(s)	310
NciI	CCSGG	1 cut(s)	988
NdeI	CATATG	1 cut(s)	1390
NdeII	GATC	8 cut(s)	373, 705, 772, 1097, 1516, 1955, 1993, 2207
NgoMIV	GCCGGC	1 cut(s)	308
NheI	GCTAGC	1 cut(s)	1970
NlaIV	GGNNCC	1 cut(s)	685
NmeAIII	GCCGAG	1 cut(s)	1058
NmuCI	GTSAC	2 cut(s)	378, 1564
NsiI	ATGCAT	1 cut(s)	1257
NspI	RCATGY	4 cut(s)	833, 1593, 1927, 1943
NspV	TTCGAA	2 cut(s)	809, 2066
PaeI	GCATGC	2 cut(s)	833, 1927
PagI	TCATGA	1 cut(s)	795
PaqCI	CACCTGC	2 cut(s)	137, 2123
PauI	GCGCGC	1 cut(s)	197
PceI	AGGCCT	1 cut(s)	2294
PciSI	GCTCTTC	1 cut(s)	2382
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PctI	GAATGC	4 cut(s)	1021, 1072, 1378, 2275
PdiI	GCCGGC	1 cut(s)	310
PfeI	GAWTC	4 cut(s)	1139, 1220, 1978, 2419
PflMI	CCANNNNNTGG	1 cut(s)	1943
PleI	GAGTC	3 cut(s)	143, 545, 873
PpsI	GAGTC	3 cut(s)	143, 545, 873
PshAI	GACNNNNGTC	1 cut(s)	675
Psp124BI	GAGCTC	2 cut(s)	1361, 1428
Psp6I	CCWGG	1 cut(s)	346
PspEI	GGTNACC	1 cut(s)	982
PspFI	CCCAGC	1 cut(s)	2091
PspGI	CCWGG	1 cut(s)	346
PspN4I	GGNNCC	1 cut(s)	685
PspPI	GGNCC	2 cut(s)	45, 818
PstI	CTGCAG	5 cut(s)	12, 165, 329, 401, 2086
PsuI	RGATCY	2 cut(s)	1097, 1955
PteI	GCGCGC	1 cut(s)	197
PvuII	CAGCTG	1 cut(s)	2091
RsaI	GTAC	5 cut(s)	685, 695, 992, 1697, 2344
RsaNI	GTAC	5 cut(s)	684, 694, 991, 1696, 2343
RseI	CAYNNNNRTG	4 cut(s)	587, 744, 800, 2520
SacI	GAGCTC	2 cut(s)	1361, 1428
SapI	GCTCTTC	1 cut(s)	2382
SaqAI	TTAA	4 cut(s)	428, 1259, 1964, 2454
Sau3AI	GATC	8 cut(s)	373, 705, 772, 1097, 1516, 1955, 1993, 2207
Sau96I	GGNCC	2 cut(s)	45, 818
SchI	GAGTC	3 cut(s)	143, 545, 874
ScrFI	CCNGG	2 cut(s)	348, 988
SduI	GDGCHC	3 cut(s)	523, 1361, 1428
SfcI	CTRYAG	5 cut(s)	8, 161, 325, 397, 2082
SfuI	TTCGAA	2 cut(s)	809, 2066
SmiMI	CAYNNNNRTG	4 cut(s)	587, 744, 800, 2520
SphI	GCATGC	2 cut(s)	833, 1927
SseBI	AGGCCT	1 cut(s)	2294
SspI	AATATT	3 cut(s)	599, 1039, 1734
SspMI	CTAG	4 cut(s)	996, 1323, 1419, 1971
SstI	GAGCTC	2 cut(s)	1361, 1428
StuI	AGGCCT	1 cut(s)	2294
StyD4I	CCNGG	2 cut(s)	346, 986
TaaI	ACNGT	5 cut(s)	237, 936, 1500, 1865, 2220
TaiI	ACGT	3 cut(s)	675, 843, 1761
TaqI	TCGA	9 cut(s)	27, 81, 97, 549, 809, 846, 1469, 1882, 2066
TatI	WGTACW	1 cut(s)	1695
TauI	GCSGC	4 cut(s)	188, 204, 529, 1796
TfiI	GAWTC	4 cut(s)	1139, 1220, 1978, 2419
Tru1I	TTAA	4 cut(s)	428, 1259, 1964, 2454
Tru9I	TTAA	4 cut(s)	428, 1259, 1964, 2454
TscAI	CASTG	5 cut(s)	325, 727, 1582, 2406, 2527
TseFI	GTSAC	2 cut(s)	378, 1564
Tsp45I	GTSAC	2 cut(s)	378, 1564
TspDTI	ATGAA	7 cut(s)	864, 1016, 1173, 1353, 1575, 2182, 2241
TspGWI	ACGGA	2 cut(s)	366, 506
TspRI	CASTG	5 cut(s)	325, 727, 1582, 2406, 2527
Van91I	CCANNNNNTGG	1 cut(s)	1943
VneI	GTGCAC	1 cut(s)	519
XapI	RAATTY	4 cut(s)	457, 1405, 1847, 2229
XceI	RCATGY	4 cut(s)	833, 1593, 1927, 1943
XcmI	CCANNNNNNNNNTGG	2 cut(s)	66, 2522
XmiI	GTMKAC	1 cut(s)	1674
XspI	CTAG	4 cut(s)	996, 1323, 1419, 1971
Zsp2I	ATGCAT	1 cut(s)	1257

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.