Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001301.1

Orthogroup ID

OG0006232

Physical Location & Seq

Genomic Coordinates Forward (+)

45833 .. 49982

Gene Structure 4150 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001301.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

atgggaagaaactacccttgggaccccagaagtagccggaaaaggccgccggagttagaggcaaagcagcagccgaccactgccaacggcgtcgggattacggcaaggcctctgacgagcatgaaatggatcacttcaggtgctgtccttcttggggatttatcaggggttgagttaaggcagctccatgcccacctcattcaaaattccctccaccaccaaaaccaatgggtgtcattgctcatcaaccaatgcacgcgcctccgtgcaccgccgccttatacccgtctcatcttcgactctacgcctcgccccaacatccatgtcttcacctccatgctcaaatattacgcccctttgggcaatgtttgctctaatcaagttgtttcactatatcaactaatgcagcgttgcgaggacgtatgtcttggtacctttgtgtacccagttttgatcaaatcgtcgggcagtgccggcattgcgttccacgcgcatgtagtgaagttgggtcttggttctgatcgttatgttcgcaatgccatcatgagtgtgtattcgaaatatgggccggttgagcatgcccgagacgtgttcgatgaaatgcctgagaggagtcttgtggattggaacaacatgatttctgggtattggaagtgggggaataaagttgaagcgtgtaaactgtttgttatgatgcctgagaagagtgttgttacttggactgctatggttaccgggtacgctaggatgaaggatttggagaatgcaagaaggtattttgataatattccggagaaaaatgtggtgtcgtggaatgcaatgctctcggcttatgctcagaatggatctccagaggaggctttgagattgtttgatggcatgatggattctggagataaaccaaatgaaactacatgggcaattgtcatttcagcgtgttcgtcatgtggtaatagttccattgcagattcgtttatccaaaagctcaaccagaagcggatgcatttaagttattatggcaaaactgcgatgcttgatatgtatgcaaagcgtgggagcatcaagaatgctagagaagtttttgatgaattgggggtgtataagagctctgggacgtggaatgccatgatatcagcatatgcaagagttgggaatttgacttcggctagagagctctttgataagatgccggaaagagatgttgtctcatggaactcgatgatttctggctatgctcagaatggacagtccactcttgcaattgatctcttcaaagatatgactgctgctgataaccccaaaccaaatgaagtcactatggtcagtgtcatctcagcatgtgggcatcttggggcattggagataggtaattgggctgtcaactttctcacaaaacatcataccaatctaagtatatcagtatacaattctttgatattcttgtactctaaatgtggaagcatggatgatgccaagagaatattcaacgaaatgaaacaacgagatgtggtttcctacaatacattgatttcagggtttgcagctcatggtcatggaatggaagctgtcaagctaaagatgaagatgaaagaagaatttattgagccaaaccgtgaaacgtatattggtattctgacagcgtgcagccatgctgggttgttagaagaaggttggaagatctttgagtcgatcaaagatcctgatgtagatcattatgcatgcgtggttgacttattaggtcgagtgggtaaagtggatgaggcaaaaaaaatagttgatggcatgcagaaagagccacatgctggagtttatggatctcttttaaatgctagccggattcacaaaaggattgatcttggggagtttgctgcaagcaagctctttgagcttgaaccacataattcaggaaactacattttgctttcgaacatatatgcctctgcaggcagctgggacgatgtggtgagagttagagaagcaatgagaaatgcaggtgtgaaaaaggcaactggttggagttgggtggaatacaatggtaagatgcacaagttcattgcgggagacagatcacacgaactgtcagatgaaatttataggcgattggctgaattagggaggaagctgaggaatgctggctacattgctgataaggcctgtgtgctaagagatgttgatgaggaagagaaagaagagatggtgggtactcatagtgaaaaattggcggtatgcttctctcttcttgttacagaagcaaagtcaatgattagagtggtgaagaatctgagggtgtgcagggattgccatacagctattaagatgatatctaagttggaaggaaggaaaattattttgagggataataacaggtttcaccatttcagtgatgggcaatgttcttgcggagagtattggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

804

Amino Acids

90.5

Weight (kDa)

8.6

Isoelectric Point (pI)

36.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14470
fragaria_vesca	FvH4_5g27410
malus_domestica	MD08G1249600.v1.1
prunus_persica	Prupe.1G586800_v2.0.a1
pyrus_communis	pycom08g21600
rosa_chinensis	RchiOBHm_Chr7g0218681 RchiOBHm_Chr7g0218851 RchiOBHm_Chr7g0218861
rosa_laevigata	RLG00000002332 RLG00000002335 RLG00000002336
rosa_multiflora	Rmu_co8331561.1_g000001 Rmu_sc0001301.1_g000001 Rmu_sc0001301.1_g000015 Rmu_sc0005784.1_g000011 Rmu_sc0005784.1_g000017
rosa_roxburghii	Rroxscaffold_3G00240390
rosa_rugosa	Rorug07G0179200 Rorug07G0179200
rosa_samantha	Rh7AG320400 Rh7AG322500 Rh7BG313200 Rh7BG313500 Rh7CG337300 Rh7CG339300
rosa_wichuraiana	Rw7G026900 Rw7G027290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1982
Acc36I	ACCTGC	1 cut(s)	1982
Acc65I	GGTACC	1 cut(s)	431
AccB1I	GGYRCC	1 cut(s)	431
AccB7I	CCANNNNNTGG	1 cut(s)	1802
AccI	GTMKAC	1 cut(s)	1422
AccII	CGCG	2 cut(s)	259, 491
AccIII	TCCGGA	1 cut(s)	790
AciI	CCGC	7 cut(s)	47, 272, 275, 997, 2057, 2222, 2400
AclWI	GGATC	4 cut(s)	137, 853, 1691, 1822
AcsI	RAATTY	4 cut(s)	205, 1153, 1595, 2088
AcuI	CTGAAG	1 cut(s)	120
AcyI	GRCGYC	1 cut(s)	90
AfaI	GTAC	5 cut(s)	433, 443, 740, 1445, 2203
AfiI	CCNNNNNNNGG	2 cut(s)	154, 1802
AflIII	ACRYGT	1 cut(s)	588
AgsI	TTSAA	5 cut(s)	203, 671, 1273, 1486, 1892
AjiI	CACGTC	2 cut(s)	589, 1116
AjuI	GAANNNNNNNTTGG	5 cut(s)	33, 1466, 1498, 1608, 1640
Alw21I	GWGCWC	3 cut(s)	271, 1109, 1176
Alw26I	GTCTC	4 cut(s)	293, 579, 1210, 2055
Alw44I	GTGCAC	1 cut(s)	267
AlwI	GGATC	4 cut(s)	137, 853, 1691, 1822
AlwNI	CAGNNNCTG	1 cut(s)	143
Ama87I	CYCGRG	1 cut(s)	582
Aor13HI	TCCGGA	1 cut(s)	790
AoxI	GGCC	4 cut(s)	44, 107, 566, 2151
ApaLI	GTGCAC	1 cut(s)	267
ApeKI	GCWGC	9 cut(s)	67, 70, 181, 406, 1286, 1541, 1644, 1868, 1947
ApoI	RAATTY	4 cut(s)	205, 1153, 1595, 2088
Asp718I	GGTACC	1 cut(s)	431
AspLEI	GCGC	2 cut(s)	261, 493
AspS9I	GGNCC	2 cut(s)	22, 566
AsuC2I	CCSGG	1 cut(s)	736
AsuHPI	GGTGA	4 cut(s)	322, 1975, 2284, 2363
AsuII	TTCGAA	2 cut(s)	557, 1925
AsuNHI	GCTAGC	1 cut(s)	1829
AvaI	CYCGRG	1 cut(s)	582
AvaII	GGWCC	1 cut(s)	22
BaeGI	GKGCMC	1 cut(s)	271
BaeI	ACNNNNGTAYC	2 cut(s)	423, 456
BanI	GGYRCC	1 cut(s)	431
BanII	GRGCYC	2 cut(s)	1109, 1176
BbsI	GAAGAC	1 cut(s)	319
Bbv12I	GWGCWC	3 cut(s)	271, 1109, 1176
BbvCI	CCTCAGC	1 cut(s)	2123
BbvI	GCAGC	9 cut(s)	79, 82, 193, 418, 1273, 1553, 1656, 1855, 1959
BccI	CCATC	6 cut(s)	548, 869, 877, 1772, 2188, 2378
BceAI	ACGGC	2 cut(s)	103, 117
BcgI	CGANNNNNNTGC	2 cut(s)	807, 841
BclI	TGATCA	1 cut(s)	453
BcnI	CCSGG	1 cut(s)	736
BcoDI	GTCTC	4 cut(s)	293, 579, 1210, 2055
BfaI	CTAG	4 cut(s)	744, 1071, 1167, 1830
BfmI	CTRYAG	1 cut(s)	1941
BfuAI	ACCTGC	1 cut(s)	1982
BglII	AGATCT	1 cut(s)	1677
Bme1390I	CCNGG	1 cut(s)	736
Bme18I	GGWCC	1 cut(s)	22
BmeT110I	CYCGRG	1 cut(s)	582
BmgBI	CACGTC	2 cut(s)	589, 1116
BmgT120I	GGNCC	2 cut(s)	22, 566
BmiI	GGNNCC	3 cut(s)	23, 24, 433
BmrFI	CCNGG	1 cut(s)	736
BmrI	ACTGGG	1 cut(s)	440
BmsI	GCATC	8 cut(s)	684, 990, 1020, 1068, 1176, 1354, 1459, 2031
BmtI	GCTAGC	1 cut(s)	1833
BmuI	ACTGGG	1 cut(s)	440
BoxI	GACNNNNGTC	1 cut(s)	423
BpiI	GAAGAC	1 cut(s)	319
BpmI	CTGGAG	3 cut(s)	834, 912, 1824
Bpu10I	CCTNAGC	1 cut(s)	2123
Bpu14I	TTCGAA	2 cut(s)	557, 1925
BpuMI	CCSGG	1 cut(s)	736
BsaBI	GATNNNNATC	1 cut(s)	1707
BsaHI	GRCGYC	1 cut(s)	90
BsaJI	CCNNGG	1 cut(s)	17
BsaWI	WCCGGW	1 cut(s)	790
Bsc4I	CCNNNNNNNGG	2 cut(s)	154, 1802
Bse118I	RCCGGY	2 cut(s)	473, 568
Bse1I	ACTGG	2 cut(s)	446, 2014
Bse8I	GATNNNNATC	1 cut(s)	1707
BseAI	TCCGGA	1 cut(s)	790
BseDI	CCNNGG	1 cut(s)	17
BseGI	GGATG	5 cut(s)	318, 753, 1005, 1471, 1762
BseJI	GATNNNNATC	1 cut(s)	1707
BseLI	CCNNNNNNNGG	2 cut(s)	154, 1802
BseMII	CTCAG	7 cut(s)	597, 690, 851, 1250, 1347, 2114, 2273
BseNI	ACTGG	2 cut(s)	446, 2014
BseRI	GAGGAG	2 cut(s)	625, 869
BseSI	GKGCMC	1 cut(s)	271
BseXI	GCAGC	9 cut(s)	79, 82, 193, 418, 1273, 1553, 1656, 1855, 1959
BseYI	CCCAGC	2 cut(s)	1652, 1950
BsgI	GTGCAG	2 cut(s)	1663, 2311
Bsh1236I	CGCG	2 cut(s)	259, 491
BshFI	GGCC	4 cut(s)	46, 109, 568, 2153
BshNI	GGYRCC	1 cut(s)	431
BsiHKAI	GWGCWC	3 cut(s)	271, 1109, 1176
BsiHKCI	CYCGRG	1 cut(s)	582
BsiSI	CCGG	8 cut(s)	37, 50, 474, 569, 735, 791, 1190, 1834
BslFI	GGGAC	3 cut(s)	35, 1126, 1967
BslI	CCNNNNNNNGG	2 cut(s)	154, 1802
BsmAI	GTCTC	4 cut(s)	293, 579, 1210, 2055
BsmBI	CGTCTC	2 cut(s)	293, 579
BsmFI	GGGAC	3 cut(s)	35, 1126, 1967
BsmI	GAATGC	5 cut(s)	769, 820, 1072, 1126, 2134
BsnI	GGCC	4 cut(s)	46, 109, 568, 2153
BsoBI	CYCGRG	1 cut(s)	582
Bsp119I	TTCGAA	2 cut(s)	557, 1925
Bsp1286I	GDGCHC	3 cut(s)	271, 1109, 1176
Bsp13I	TCCGGA	1 cut(s)	790
BspACI	CCGC	7 cut(s)	47, 272, 275, 997, 2057, 2222, 2400
BspANI	GGCC	4 cut(s)	46, 109, 568, 2153
BspCNI	CTCAG	7 cut(s)	598, 691, 850, 1249, 1346, 2115, 2274
BspEI	TCCGGA	1 cut(s)	790
BspFNI	CGCG	2 cut(s)	259, 491
BspHI	TCATGA	1 cut(s)	543
BspLI	GGNNCC	3 cut(s)	23, 24, 433
BspMAI	CTGCAG	1 cut(s)	1945
BspMI	ACCTGC	1 cut(s)	1982
BspOI	GCTAGC	1 cut(s)	1833
BspPI	GGATC	4 cut(s)	137, 853, 1691, 1822
BspT104I	TTCGAA	2 cut(s)	557, 1925
BspT107I	GGYRCC	1 cut(s)	431
BsrFI	RCCGGY	2 cut(s)	473, 568
BsrI	ACTGG	2 cut(s)	446, 2014
BssAI	RCCGGY	2 cut(s)	473, 568
BssECI	CCNNGG	1 cut(s)	17
BssNAI	GTATAC	1 cut(s)	1423
BssNI	GRCGYC	1 cut(s)	90
BssT1I	CCWWGG	1 cut(s)	17
Bst1107I	GTATAC	1 cut(s)	1423
Bst4CI	ACNGT	4 cut(s)	684, 1248, 1613, 2079
Bst6I	CTCTTC	5 cut(s)	698, 1274, 2175, 2184, 2241
BstACI	GRCGYC	1 cut(s)	90
BstAPI	GCANNNNNTGC	2 cut(s)	369, 2298
BstBI	TTCGAA	2 cut(s)	557, 1925
BstEII	GGTNACC	1 cut(s)	730
BstF5I	GGATG	5 cut(s)	318, 753, 1005, 1471, 1762
BstFNI	CGCG	2 cut(s)	259, 491
BstHHI	GCGC	2 cut(s)	261, 493
BstMAI	GTCTC	4 cut(s)	293, 579, 1210, 2055
BstMWI	GCNNNNNNNGC	9 cut(s)	369, 474, 479, 488, 574, 1792, 1885, 2150, 2298
BstNSI	RCATGY	6 cut(s)	497, 581, 1341, 1722, 1786, 1802
BstPAI	GACNNNNGTC	1 cut(s)	423
BstPI	GGTNACC	1 cut(s)	730
BstSCI	CCNGG	1 cut(s)	734
BstSFI	CTRYAG	1 cut(s)	1941
BstSLI	GKGCMC	1 cut(s)	271
BstUI	CGCG	2 cut(s)	259, 491
BstV1I	GCAGC	9 cut(s)	79, 82, 193, 418, 1273, 1553, 1656, 1855, 1959
BstV2I	GAAGAC	1 cut(s)	319
BstX2I	RGATCY	4 cut(s)	845, 1677, 1696, 1814
BstYI	RGATCY	4 cut(s)	845, 1677, 1696, 1814
BstZ17I	GTATAC	1 cut(s)	1423
BsuRI	GGCC	4 cut(s)	46, 109, 568, 2153
BtgZI	GCGATG	1 cut(s)	1043
BtrI	CACGTC	2 cut(s)	589, 1116
BtsCI	GGATG	5 cut(s)	318, 753, 1005, 1471, 1762
BtsI	GCAGTG	2 cut(s)	78, 475
BtsIMutI	CAGTG	4 cut(s)	78, 475, 1330, 2386
BveI	ACCTGC	1 cut(s)	1982
CaiI	CAGNNNCTG	1 cut(s)	143
CciI	TCATGA	1 cut(s)	543
CfoI	GCGC	2 cut(s)	261, 493
Cfr10I	RCCGGY	2 cut(s)	473, 568
Cfr13I	GGNCC	2 cut(s)	22, 566
CseI	GACGC	1 cut(s)	79
Csp6I	GTAC	5 cut(s)	432, 442, 739, 1444, 2202
CviQI	GTAC	5 cut(s)	432, 442, 739, 1444, 2202
DraI	TTTAAA	1 cut(s)	1824
Eam1104I	CTCTTC	5 cut(s)	698, 1274, 2175, 2184, 2241
EarI	CTCTTC	5 cut(s)	698, 1274, 2175, 2184, 2241
Ecl136II	GAGCTC	2 cut(s)	1107, 1174
Eco130I	CCWWGG	1 cut(s)	17
Eco147I	AGGCCT	2 cut(s)	109, 2153
Eco24I	GRGCYC	2 cut(s)	1109, 1176
Eco32I	GATATC	2 cut(s)	1131, 2322
Eco47I	GGWCC	1 cut(s)	22
Eco53kI	GAGCTC	2 cut(s)	1107, 1174
Eco57I	CTGAAG	1 cut(s)	120
Eco88I	CYCGRG	1 cut(s)	582
Eco91I	GGTNACC	1 cut(s)	730
EcoICRI	GAGCTC	2 cut(s)	1107, 1174
EcoO109I	RGGNCCY	1 cut(s)	22
EcoO65I	GGTNACC	1 cut(s)	730
EcoRV	GATATC	2 cut(s)	1131, 2322
EcoT14I	CCWWGG	1 cut(s)	17
EcoT22I	ATGCAT	2 cut(s)	1005, 1720
EcoT38I	GRGCYC	2 cut(s)	1109, 1176
ErhI	CCWWGG	1 cut(s)	17
Esp3I	CGTCTC	2 cut(s)	293, 579
FaqI	GGGAC	3 cut(s)	35, 1126, 1967
FauI	CCCGC	1 cut(s)	2050
FauNDI	CATATG	1 cut(s)	1138
FbaI	TGATCA	1 cut(s)	453
FblI	GTMKAC	1 cut(s)	1422
FokI	GGATG	5 cut(s)	305, 760, 1012, 1478, 1769
FriOI	GRGCYC	2 cut(s)	1109, 1176
FspBI	CTAG	4 cut(s)	744, 1071, 1167, 1830
GlaI	GCGC	2 cut(s)	260, 492
GsaI	CCCAGC	2 cut(s)	1656, 1954
GsuI	CTGGAG	3 cut(s)	834, 912, 1824
HaeIII	GGCC	4 cut(s)	46, 109, 568, 2153
HapII	CCGG	8 cut(s)	37, 50, 474, 569, 735, 791, 1190, 1834
HgaI	GACGC	1 cut(s)	79
HhaI	GCGC	2 cut(s)	261, 493
Hin1I	GRCGYC	1 cut(s)	90
Hin6I	GCGC	2 cut(s)	259, 491
HinP1I	GCGC	2 cut(s)	259, 491
HincII	GTYRAC	2 cut(s)	1381, 1729
HindII	GTYRAC	2 cut(s)	1381, 1729
HinfI	GANTC	7 cut(s)	299, 613, 887, 968, 1685, 1837, 2278
HpaII	CCGG	8 cut(s)	37, 50, 474, 569, 735, 791, 1190, 1834
HphI	GGTGA	4 cut(s)	322, 1975, 2284, 2363
Hpy166II	GTNNAC	7 cut(s)	269, 442, 680, 1251, 1381, 1423, 1729
Hpy188I	TCNGA	7 cut(s)	114, 520, 840, 1239, 1635, 2083, 2283
Hpy188III	TCNNGA	8 cut(s)	94, 544, 791, 851, 891, 1063, 1700, 1905
Hpy8I	GTNNAC	7 cut(s)	269, 442, 680, 1251, 1381, 1423, 1729
Hpy99I	CGWCG	2 cut(s)	95, 466
HpyAV	CCTTC	6 cut(s)	158, 745, 765, 1661, 2327, 2331
HpyCH4III	ACNGT	4 cut(s)	684, 1248, 1613, 2079
HpyCH4IV	ACGT	4 cut(s)	420, 588, 1115, 1619
HpyF10VI	GCNNNNNNNGC	9 cut(s)	369, 474, 479, 488, 574, 1792, 1885, 2150, 2298
HpySE526I	ACGT	4 cut(s)	420, 588, 1115, 1619
Hsp92I	GRCGYC	1 cut(s)	90
HspAI	GCGC	2 cut(s)	259, 491
KflI	GGGWCCC	1 cut(s)	22
Kpn2I	TCCGGA	1 cut(s)	790
KpnI	GGTACC	1 cut(s)	435
KroI	GCCGGC	1 cut(s)	473
KroNI	GCCGGC	1 cut(s)	475
Ksp22I	TGATCA	1 cut(s)	453
LmnI	GCTCC	2 cut(s)	189, 1056
Lsp1109I	GCAGC	9 cut(s)	79, 82, 193, 418, 1273, 1553, 1656, 1855, 1959
LweI	GCATC	8 cut(s)	684, 990, 1020, 1068, 1176, 1354, 1459, 2031
MaeI	CTAG	4 cut(s)	744, 1071, 1167, 1830
MaeII	ACGT	4 cut(s)	420, 588, 1115, 1619
MaeIII	GTNAC	4 cut(s)	712, 730, 1312, 2242
MfeI	CAATTG	2 cut(s)	921, 1260
MflI	RGATCY	4 cut(s)	845, 1677, 1696, 1814
MhlI	GDGCHC	3 cut(s)	271, 1109, 1176
MlyI	GAGTC	3 cut(s)	293, 622, 1694
MmeI	TCCRAC	3 cut(s)	1652, 1994, 2310
Mph1103I	ATGCAT	2 cut(s)	1005, 1720
MroI	TCCGGA	1 cut(s)	790
MroNI	GCCGGC	1 cut(s)	473
MseI	TTAA	4 cut(s)	176, 1007, 1823, 2313
MslI	CAYNNNNRTG	5 cut(s)	335, 492, 548, 1551, 2379
MspA1I	CMGCKG	1 cut(s)	1950
MspI	CCGG	8 cut(s)	37, 50, 474, 569, 735, 791, 1190, 1834
MspR9I	CCNGG	1 cut(s)	736
MunI	CAATTG	2 cut(s)	921, 1260
Mva1269I	GAATGC	5 cut(s)	769, 820, 1072, 1126, 2134
MvnI	CGCG	2 cut(s)	259, 491
MwoI	GCNNNNNNNGC	9 cut(s)	369, 474, 479, 488, 574, 1792, 1885, 2150, 2298
NaeI	GCCGGC	1 cut(s)	475
NciI	CCSGG	1 cut(s)	736
NdeI	CATATG	1 cut(s)	1138
NgoMIV	GCCGGC	1 cut(s)	473
NheI	GCTAGC	1 cut(s)	1829
NlaIV	GGNNCC	3 cut(s)	23, 24, 433
NmeAIII	GCCGAG	1 cut(s)	806
NmuCI	GTSAC	1 cut(s)	1312
NsiI	ATGCAT	2 cut(s)	1005, 1720
NspI	RCATGY	6 cut(s)	497, 581, 1341, 1722, 1786, 1802
NspV	TTCGAA	2 cut(s)	557, 1925
PaeI	GCATGC	3 cut(s)	581, 1722, 1786
PagI	TCATGA	1 cut(s)	543
PaqCI	CACCTGC	1 cut(s)	1982
PceI	AGGCCT	2 cut(s)	109, 2153
PctI	GAATGC	5 cut(s)	769, 820, 1072, 1126, 2134
PdiI	GCCGGC	1 cut(s)	475
PfeI	GAWTC	4 cut(s)	887, 968, 1837, 2278
PflMI	CCANNNNNTGG	1 cut(s)	1802
PleI	GAGTC	3 cut(s)	293, 621, 1693
PpsI	GAGTC	3 cut(s)	293, 621, 1693
PpuMI	RGGWCCY	1 cut(s)	22
PshAI	GACNNNNGTC	1 cut(s)	423
Psp124BI	GAGCTC	2 cut(s)	1109, 1176
Psp5II	RGGWCCY	1 cut(s)	22
PspEI	GGTNACC	1 cut(s)	730
PspFI	CCCAGC	2 cut(s)	1652, 1950
PspN4I	GGNNCC	3 cut(s)	23, 24, 433
PspPI	GGNCC	2 cut(s)	22, 566
PspPPI	RGGWCCY	1 cut(s)	22
PstI	CTGCAG	1 cut(s)	1945
PstNI	CAGNNNCTG	1 cut(s)	143
PsuI	RGATCY	4 cut(s)	845, 1677, 1696, 1814
PvuII	CAGCTG	1 cut(s)	1950
RsaI	GTAC	5 cut(s)	433, 443, 740, 1445, 2203
RsaNI	GTAC	5 cut(s)	432, 442, 739, 1444, 2202
RseI	CAYNNNNRTG	5 cut(s)	335, 492, 548, 1551, 2379
SacI	GAGCTC	2 cut(s)	1109, 1176
SaqAI	TTAA	4 cut(s)	176, 1007, 1823, 2313
Sau96I	GGNCC	2 cut(s)	22, 566
SchI	GAGTC	3 cut(s)	293, 622, 1694
ScrFI	CCNGG	1 cut(s)	736
SduI	GDGCHC	3 cut(s)	271, 1109, 1176
SfaNI	GCATC	8 cut(s)	684, 990, 1020, 1068, 1176, 1354, 1459, 2031
SfcI	CTRYAG	1 cut(s)	1941
SfuI	TTCGAA	2 cut(s)	557, 1925
SinI	GGWCC	1 cut(s)	22
SmiMI	CAYNNNNRTG	5 cut(s)	335, 492, 548, 1551, 2379
SphI	GCATGC	3 cut(s)	581, 1722, 1786
SseBI	AGGCCT	2 cut(s)	109, 2153
SsiI	CCGC	7 cut(s)	47, 272, 275, 997, 2057, 2222, 2400
SspI	AATATT	3 cut(s)	347, 787, 1482
SspMI	CTAG	4 cut(s)	744, 1071, 1167, 1830
SstI	GAGCTC	2 cut(s)	1109, 1176
StuI	AGGCCT	2 cut(s)	109, 2153
StyD4I	CCNGG	1 cut(s)	734
StyI	CCWWGG	1 cut(s)	17
TaaI	ACNGT	4 cut(s)	684, 1248, 1613, 2079
TaiI	ACGT	4 cut(s)	423, 591, 1118, 1622
TaqI	TCGA	7 cut(s)	297, 557, 594, 1217, 1688, 1741, 1925
TatI	WGTACW	1 cut(s)	1443
TauI	GCSGC	2 cut(s)	49, 277
TfiI	GAWTC	4 cut(s)	887, 968, 1837, 2278
Tru1I	TTAA	4 cut(s)	176, 1007, 1823, 2313
Tru9I	TTAA	4 cut(s)	176, 1007, 1823, 2313
TscAI	CASTG	4 cut(s)	85, 475, 1330, 2386
TseFI	GTSAC	1 cut(s)	1312
TseI	GCWGC	9 cut(s)	67, 70, 181, 406, 1286, 1541, 1644, 1868, 1947
Tsp45I	GTSAC	1 cut(s)	1312
TspGWI	ACGGA	1 cut(s)	254
TspRI	CASTG	4 cut(s)	85, 475, 1330, 2386
Van91I	CCANNNNNTGG	1 cut(s)	1802
VneI	GTGCAC	1 cut(s)	267
VpaK11BI	GGWCC	1 cut(s)	22
XapI	RAATTY	4 cut(s)	205, 1153, 1595, 2088
XceI	RCATGY	6 cut(s)	497, 581, 1341, 1722, 1786, 1802
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2381
XmiI	GTMKAC	1 cut(s)	1422
XspI	CTAG	4 cut(s)	744, 1071, 1167, 1830
Zsp2I	ATGCAT	2 cut(s)	1005, 1720

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.