Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006232

Physical Location & Seq

Genomic Coordinates Forward (+)

47635369 .. 47638658

Gene Structure 3290 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G586800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGAATTTTGGGCGTTTGTCGATGTCACAGTTGGATAGCTTAGCATGCAAGATAAGCAATTTGAGTCAGCTAAGGCAGTTTCATGCGCAGCTCATTCAAAATTCCCTCCACCACCATAGCCAATGGGCGTCACTGCTCATCTCCCAATGCACACGCCTCCGTGCGCCGCCACCCTATACCCGTCTCATCTTCGATTCCACACCTCGCCCCGATATCCATGTCTTCATCTCTATGCTCAAATATTACTCCAATTTGGGCAGTGCCCATTTTAATCAAGTTGTTTCTCTGTATCAAAAGCTGCAGTGTTGTGACTTAAGGATCGGTACCTTTGTGTACCCTGTCTTGATCAAATCTGCCGGCAGTAAAGGAATTGAGTTCCATGCCCATGTCCTGAAATTGGGTCTTGCTTCTGATCCCTACATTCGCAATGCCATCATGGGTTTGTATGCAAAATATGGCCCGGTTGAGAACGCCAGAGATGTGTTTGCTGAAATGCATGAGAGAACTCTTGCAGATTGGAATAATATGATCTTTGGGTACTGGAACTGGGGGAATAAAGCTGAAGCGTGCAGACTCTTTGATATGATGCCCGAGAGGAATGTTGTCACTTGGACTGCTATGGTTACTGGGTATGCTAGGATGAAGGATTTGGAGAATGCAAGGAGGTATTTTGATGAAATTCCAGAGAAAAATGTTGTATCCTGGAATGCAATGCTCTCCGCTTATGCTCAGAACAGATTTCCAGAGGAGGCTTTAAAATTGTTTGATGATATGATGAACTCCAGGGATCAACCAAATGAAACTACTTGGGCAATTGTCATTTCAGCATGTTCGTCATGTGGTGATTGCTCCCTTGCTGATTCATTTGTTCAAAAGCTCAACCAGAAGCGGATACATTTAAGTTATTTTGCCAAGACAGCGCTGCTTGATATGTATGCAAAGCGTGGGAGCCTCCAGGCTGCTAGACAAGTTTTTGATGAATTGGGGGTGTCTAGGAACACTGTTACCTGGAATGCCATGATATCAGCTTATACAAGGGTTGGGGATTTGGCTTCAGCTAGAGAGCTCTTTGATAAGATGCTAGAAAGGGATGTTGTCACATGGAACTCGATGATTTCTGGTTATGCTCAAAATGGGCAGTCAGCTCTTGCAATTGATCTCTTTAAAGATATGATTACTGCTGCTGATGATCCCAAACCAGATGAGGTAACTATGGTGAGTGTCATCTCCGCATGTGGACATCTTGGAGCCTTAGACATAGGAAATTGGGTTATCAGTATTGTCAGGAAAAATCATATTAAGCTAAGCATATCAGGATACAATTCTTTGATATTCTTGTACTCCAAGTGTGGAAGCATGGATGATGCCAAGAGGACATTCCAAGAAATGACGACAAGAGATGTGGTTTCCTACAACACATTGATTGCAGGGTTTGCAGCTCATGGTCATGGAATGGAAGCTGTCAAACTACTGTCGAAGATGAAAGGAGAATTTGTTGAACCGGACCGTGTAACATATATTGTTATTCTTACGGCATGTAGCCATGCAGGGATGTTAGAAGAAGGTTGGAAGGTTTTTGAGTCAATCAAAGCTCCTGATGCCGATCATTATGCCTGTGTGATTGATTTGTTAGGTCGAGTGGGTAAACTAGATGAAGCAAAAAAAATTATCGATGACATGCCGAAGGAGCCATATGCTGGGGTTTATGGGTCTCTTTTAAATGCTAGCCGAATTCACAAAAGAATCGATCTTGGGGAGTTTGCTGCAAGCACGCTCTTTGAGCTTGAACCACATAATTCAGGAAACTACATTTTACTTTCAAACATATATGCCTCAGCAGGCAGGTGGGATGATGTGGTGAGAGTTAGAGAATTAATGAGAAAAGTAGGGGTGAAAAAGGCAACTGGGTGGAGTTGGGTTGAATACAAAGGTAAGTTGCACAAGTTCATTGTGGGAGACAAATCACATGAGCGGTCAGACGATGTTTATAGGGTATTGGCGGAATTAGGGAGGAAAATGCGAAATTCTGGGTACATGGCTGATAAGACCTGTGTGCTAAGAGATGTTGAGGAGGAGGAGAAAGAAGAGATGGTGGGTACTCACAGTGAAAAGTTAGCAGTTTGCTTCGCTCTTCTGGTTACTGATGCAGAGGCAGTGATTAGGGTAGTGAAGAATCTGAGGGTGTGCTGGGATTGCCATACAGCTATGAAGATGATATCTAACTTGGAGGGAAGGAAAATTATTTTGAGGGATAATAATAGGTTTCACTGCTTCAGTGATGGGATATGTTCTTGCGGAGACTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

770

Amino Acids

87.0

Weight (kDa)

7.54

Isoelectric Point (pI)

34.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006232)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14470
fragaria_vesca	FvH4_5g27410
malus_domestica	MD08G1249600.v1.1
prunus_persica	Prupe.1G586800_v2.0.a1
pyrus_communis	pycom08g21600
rosa_chinensis	RchiOBHm_Chr7g0218681 RchiOBHm_Chr7g0218851 RchiOBHm_Chr7g0218861
rosa_laevigata	RLG00000002332 RLG00000002335 RLG00000002336
rosa_multiflora	Rmu_co8331561.1_g000001 Rmu_sc0001301.1_g000001 Rmu_sc0001301.1_g000015 Rmu_sc0005784.1_g000011 Rmu_sc0005784.1_g000017
rosa_roxburghii	Rroxscaffold_3G00240390
rosa_rugosa	Rorug07G0179200 Rorug07G0179200
rosa_samantha	Rh7AG320400 Rh7AG322500 Rh7BG313200 Rh7BG313500 Rh7CG337300 Rh7CG339300
rosa_wichuraiana	Rw7G026900 Rw7G027290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1833
Acc16I	TGCGCA	1 cut(s)	87
Acc36I	ACCTGC	1 cut(s)	1833
Acc65I	GGTACC	1 cut(s)	323
AccB1I	GGYRCC	1 cut(s)	323
AccB7I	CCANNNNNTGG	1 cut(s)	1697
AccBSI	CCGCTC	1 cut(s)	1972
AciI	CCGC	7 cut(s)	167, 720, 889, 1230, 1972, 2000, 2295
AclWI	GGATC	4 cut(s)	326, 407, 795, 1184
AcsI	RAATTY	6 cut(s)	4, 100, 678, 1490, 1731, 2023
AcuI	CTGAAG	3 cut(s)	582, 1038, 2257
AcyI	GRCGYC	1 cut(s)	128
AfaI	GTAC	6 cut(s)	325, 335, 539, 1340, 2033, 2098
AfeI	AGCGCT	1 cut(s)	921
AfiI	CCNNNNNNNGG	2 cut(s)	397, 1697
AflII	CTTAAG	1 cut(s)	313
AgsI	TTSAA	6 cut(s)	98, 872, 1499, 1787, 1821, 1922
AjnI	CCWGG	4 cut(s)	701, 782, 954, 1007
AjuI	GAANNNNNNNTTGG	2 cut(s)	1361, 1393
Alw21I	GWGCWC	1 cut(s)	1068
Alw26I	GTCTC	4 cut(s)	188, 1716, 1950, 2292
AlwI	GGATC	4 cut(s)	326, 407, 795, 1184
Ama87I	CYCGRG	1 cut(s)	590
Aor51HI	AGCGCT	1 cut(s)	921
AoxI	GGCC	1 cut(s)	457
ApeKI	GCWGC	7 cut(s)	88, 298, 922, 959, 1181, 1436, 1763
ApoI	RAATTY	6 cut(s)	4, 100, 678, 1490, 1731, 2023
AseI	ATTAAT	1 cut(s)	1874
Asp718I	GGTACC	1 cut(s)	323
AspLEI	GCGC	3 cut(s)	88, 166, 922
AspS9I	GGNCC	2 cut(s)	458, 1504
AsuC2I	CCSGG	1 cut(s)	461
AsuHPI	GGTGA	4 cut(s)	854, 1228, 1870, 1903
AsuNHI	GCTAGC	1 cut(s)	1724
AvaI	CYCGRG	1 cut(s)	590
AvaII	GGWCC	1 cut(s)	1504
BaeGI	GKGCMC	1 cut(s)	265
BaeI	ACNNNNGTAYC	2 cut(s)	315, 348
BanI	GGYRCC	1 cut(s)	323
BanII	GRGCYC	1 cut(s)	1068
BbsI	GAAGAC	1 cut(s)	214
Bbv12I	GWGCWC	1 cut(s)	1068
BbvCI	CCTCAGC	1 cut(s)	1834
BbvI	GCAGC	7 cut(s)	100, 285, 909, 946, 1168, 1448, 1750
BccI	CCATC	3 cut(s)	440, 2083, 2273
BceAI	ACGGC	1 cut(s)	1548
BcgI	CGANNNNNNTGC	2 cut(s)	1592, 1626
BciT130I	CCWGG	4 cut(s)	703, 784, 956, 1009
BciVI	GTATCC	3 cut(s)	709, 885, 1310
BclI	TGATCA	1 cut(s)	345
BcnI	CCSGG	1 cut(s)	461
BcoDI	GTCTC	4 cut(s)	188, 1716, 1950, 2292
BfaI	CTAG	7 cut(s)	636, 963, 993, 1059, 1082, 1649, 1725
BfmI	CTRYAG	1 cut(s)	299
BfoI	RGCGCY	1 cut(s)	923
BfrI	CTTAAG	1 cut(s)	313
BfuAI	ACCTGC	1 cut(s)	1833
BfuI	GTATCC	3 cut(s)	709, 885, 1310
BisI	GCNGC	8 cut(s)	89, 167, 299, 923, 960, 1182, 1437, 1764
BlpI	GCTNAGC	2 cut(s)	40, 1304
BlsI	GCNGC	8 cut(s)	90, 168, 300, 924, 961, 1183, 1438, 1765
Bme1390I	CCNGG	5 cut(s)	461, 703, 784, 956, 1009
Bme18I	GGWCC	1 cut(s)	1504
BmeT110I	CYCGRG	1 cut(s)	590
BmgT120I	GGNCC	2 cut(s)	458, 1504
BmiI	GGNNCC	4 cut(s)	325, 950, 1249, 1689
BmrFI	CCNGG	5 cut(s)	461, 703, 784, 956, 1009
BmrI	ACTGGG	3 cut(s)	556, 636, 1914
BmsI	GCATC	5 cut(s)	576, 1068, 1354, 1588, 2134
BmtI	GCTAGC	1 cut(s)	1728
BmuI	ACTGGG	3 cut(s)	556, 636, 1914
BpiI	GAAGAC	1 cut(s)	214
BpmI	CTGGAG	2 cut(s)	766, 938
Bpu10I	CCTNAGC	2 cut(s)	71, 1834
Bpu1102I	GCTNAGC	2 cut(s)	40, 1304
BpuMI	CCSGG	1 cut(s)	461
Bsa29I	ATCGAT	2 cut(s)	1671, 1746
BsaBI	GATNNNNATC	1 cut(s)	1602
BsaHI	GRCGYC	1 cut(s)	128
BsaI	GGTCTC	1 cut(s)	1716
BsaJI	CCNNGG	1 cut(s)	783
BsaWI	WCCGGW	1 cut(s)	1501
BsaXI	ACNNNNNCTCC	2 cut(s)	1479, 1509
Bsc4I	CCNNNNNNNGG	2 cut(s)	397, 1697
Bse118I	RCCGGY	1 cut(s)	356
Bse1I	ACTGG	4 cut(s)	545, 551, 631, 1909
Bse3DI	GCAATG	2 cut(s)	433, 717
Bse8I	GATNNNNATC	1 cut(s)	1602
BseBI	CCWGG	4 cut(s)	703, 784, 956, 1009
BseCI	ATCGAT	2 cut(s)	1671, 1746
BseDI	CCNNGG	1 cut(s)	783
BseGI	GGATG	5 cut(s)	645, 1096, 1366, 1557, 1855
BseJI	GATNNNNATC	1 cut(s)	1602
BseLI	CCNNNNNNNGG	2 cut(s)	397, 1697
BseMI	GCAATG	2 cut(s)	433, 717
BseMII	CTCAG	3 cut(s)	743, 1848, 2168
BseNI	ACTGG	4 cut(s)	545, 551, 631, 1909
BseRI	GAGGAG	4 cut(s)	761, 2084, 2087, 2090
BseSI	GKGCMC	1 cut(s)	265
BseXI	GCAGC	7 cut(s)	100, 285, 909, 946, 1168, 1448, 1750
BseYI	CCCAGC	2 cut(s)	1697, 2187
BsgI	GTGCAG	1 cut(s)	589
BshFI	GGCC	1 cut(s)	459
BshNI	GGYRCC	1 cut(s)	323
BshVI	ATCGAT	2 cut(s)	1671, 1746
BsiHKAI	GWGCWC	1 cut(s)	1068
BsiHKCI	CYCGRG	1 cut(s)	590
BsiSI	CCGG	3 cut(s)	357, 461, 1502
BslI	CCNNNNNNNGG	2 cut(s)	397, 1697
BsmAI	GTCTC	4 cut(s)	188, 1716, 1950, 2292
BsmBI	CGTCTC	1 cut(s)	188
BsmI	GAATGC	3 cut(s)	661, 712, 1018
BsnI	GGCC	1 cut(s)	459
Bso31I	GGTCTC	1 cut(s)	1716
BsoBI	CYCGRG	1 cut(s)	590
Bsp1286I	GDGCHC	2 cut(s)	265, 1068
Bsp143I	GATC	9 cut(s)	318, 345, 412, 528, 787, 1156, 1189, 1603, 1747
Bsp1720I	GCTNAGC	2 cut(s)	40, 1304
BspACI	CCGC	7 cut(s)	167, 720, 889, 1230, 1972, 2000, 2295
BspANI	GGCC	1 cut(s)	459
BspCNI	CTCAG	3 cut(s)	742, 1847, 2169
BspDI	ATCGAT	2 cut(s)	1671, 1746
BspLI	GGNNCC	4 cut(s)	325, 950, 1249, 1689
BspMAI	CTGCAG	1 cut(s)	303
BspMI	ACCTGC	1 cut(s)	1833
BspOI	GCTAGC	1 cut(s)	1728
BspPI	GGATC	4 cut(s)	326, 407, 795, 1184
BspQI	GCTCTTC	1 cut(s)	2136
BspT107I	GGYRCC	1 cut(s)	323
BspTI	CTTAAG	1 cut(s)	313
BspTNI	GGTCTC	1 cut(s)	1716
BsrBI	CCGCTC	1 cut(s)	1972
BsrDI	GCAATG	2 cut(s)	433, 717
BsrFI	RCCGGY	1 cut(s)	356
BsrI	ACTGG	4 cut(s)	545, 551, 631, 1909
BssAI	RCCGGY	1 cut(s)	356
BssECI	CCNNGG	1 cut(s)	783
BssMI	GATC	9 cut(s)	318, 345, 412, 528, 787, 1156, 1189, 1603, 1747
BssNI	GRCGYC	1 cut(s)	128
Bst2UI	CCWGG	4 cut(s)	703, 784, 956, 1009
Bst4CI	ACNGT	5 cut(s)	30, 1003, 1473, 1508, 2105
Bst6I	CTCTTC	2 cut(s)	2079, 2136
BstACI	GRCGYC	1 cut(s)	128
BstAFI	CTTAAG	1 cut(s)	313
BstAPI	GCANNNNNTGC	1 cut(s)	1433
BstC8I	GCNNGC	7 cut(s)	46, 358, 568, 1726, 1768, 1772, 1840
BstDEI	CTNAG	8 cut(s)	40, 71, 729, 1252, 1304, 1834, 2057, 2177
BstF5I	GGATG	5 cut(s)	645, 1096, 1366, 1557, 1855
BstH2I	RGCGCY	1 cut(s)	923
BstHHI	GCGC	3 cut(s)	88, 166, 922
BstKTI	GATC	9 cut(s)	321, 348, 415, 531, 790, 1159, 1192, 1606, 1750
BstMAI	GTCTC	4 cut(s)	188, 1716, 1950, 2292
BstMBI	GATC	9 cut(s)	318, 345, 412, 528, 787, 1156, 1189, 1603, 1747
BstMWI	GCNNNNNNNGC	8 cut(s)	45, 54, 917, 1433, 1598, 1687, 1780, 2193
BstNI	CCWGG	4 cut(s)	703, 784, 956, 1009
BstNSI	RCATGY	5 cut(s)	48, 831, 1236, 1539, 1681
BstSCI	CCNGG	5 cut(s)	459, 701, 782, 954, 1007
BstSFI	CTRYAG	1 cut(s)	299
BstSLI	GKGCMC	1 cut(s)	265
BstV1I	GCAGC	7 cut(s)	100, 285, 909, 946, 1168, 1448, 1750
BstV2I	GAAGAC	1 cut(s)	214
Bsu15I	ATCGAT	2 cut(s)	1671, 1746
BsuI	GTATCC	3 cut(s)	709, 885, 1310
BsuRI	GGCC	1 cut(s)	459
BsuTUI	ATCGAT	2 cut(s)	1671, 1746
BtsCI	GGATG	5 cut(s)	645, 1096, 1366, 1557, 1855
BtsI	GCAGTG	5 cut(s)	131, 265, 308, 2160, 2266
BtsIMutI	CAGTG	8 cut(s)	131, 265, 308, 999, 2110, 2160, 2266, 2281
BveI	ACCTGC	1 cut(s)	1833
Cac8I	GCNNGC	7 cut(s)	46, 358, 568, 1726, 1768, 1772, 1840
CfoI	GCGC	3 cut(s)	88, 166, 922
Cfr10I	RCCGGY	1 cut(s)	356
Cfr13I	GGNCC	2 cut(s)	458, 1504
ClaI	ATCGAT	2 cut(s)	1671, 1746
CpoI	CGGWCCG	1 cut(s)	1504
CseI	GACGC	1 cut(s)	117
Csp6I	GTAC	6 cut(s)	324, 334, 538, 1339, 2032, 2097
CspCI	CAANNNNNGTGG	2 cut(s)	1383, 1418
CspI	CGGWCCG	1 cut(s)	1504
CviQI	GTAC	6 cut(s)	324, 334, 538, 1339, 2032, 2097
DdeI	CTNAG	8 cut(s)	40, 71, 729, 1252, 1304, 1834, 2057, 2177
DpnI	GATC	9 cut(s)	320, 347, 414, 530, 789, 1158, 1191, 1605, 1749
DpnII	GATC	9 cut(s)	318, 345, 412, 528, 787, 1156, 1189, 1603, 1747
DraI	TTTAAA	3 cut(s)	756, 1165, 1719
Eam1104I	CTCTTC	2 cut(s)	2079, 2136
EarI	CTCTTC	2 cut(s)	2079, 2136
EciI	GGCGGA	1 cut(s)	2015
Ecl136II	GAGCTC	1 cut(s)	1066
Eco24I	GRGCYC	1 cut(s)	1068
Eco31I	GGTCTC	1 cut(s)	1716
Eco32I	GATATC	3 cut(s)	214, 1023, 2217
Eco47I	GGWCC	1 cut(s)	1504
Eco47III	AGCGCT	1 cut(s)	921
Eco53kI	GAGCTC	1 cut(s)	1066
Eco57I	CTGAAG	3 cut(s)	582, 1038, 2257
Eco88I	CYCGRG	1 cut(s)	590
EcoICRI	GAGCTC	1 cut(s)	1066
EcoRI	GAATTC	1 cut(s)	1731
EcoRII	CCWGG	4 cut(s)	701, 782, 954, 1007
EcoRV	GATATC	3 cut(s)	214, 1023, 2217
EcoT22I	ATGCAT	1 cut(s)	498
EcoT38I	GRGCYC	1 cut(s)	1068
Esp3I	CGTCTC	1 cut(s)	188
FauNDI	CATATG	1 cut(s)	1693
FbaI	TGATCA	1 cut(s)	345
Fnu4HI	GCNGC	8 cut(s)	89, 167, 299, 923, 960, 1182, 1437, 1764
FokI	GGATG	5 cut(s)	652, 1103, 1373, 1564, 1862
FriOI	GRGCYC	1 cut(s)	1068
Fsp4HI	GCNGC	8 cut(s)	89, 167, 299, 923, 960, 1182, 1437, 1764
FspBI	CTAG	7 cut(s)	636, 963, 993, 1059, 1082, 1649, 1725
FspI	TGCGCA	1 cut(s)	87
GlaI	GCGC	3 cut(s)	87, 165, 921
GluI	GCNGC	8 cut(s)	89, 167, 299, 923, 960, 1182, 1437, 1764
GsaI	CCCAGC	2 cut(s)	1701, 2191
GsuI	CTGGAG	2 cut(s)	766, 938
HaeII	RGCGCY	1 cut(s)	923
HaeIII	GGCC	1 cut(s)	459
HapII	CCGG	3 cut(s)	357, 461, 1502
HgaI	GACGC	1 cut(s)	117
HhaI	GCGC	3 cut(s)	88, 166, 922
Hin1I	GRCGYC	1 cut(s)	128
Hin6I	GCGC	3 cut(s)	86, 164, 920
HinP1I	GCGC	3 cut(s)	86, 164, 920
HinfI	GANTC	7 cut(s)	64, 194, 573, 860, 1580, 1743, 2173
HpaII	CCGG	3 cut(s)	357, 461, 1502
HphI	GGTGA	4 cut(s)	854, 1228, 1870, 1903
Hpy166II	GTNNAC	3 cut(s)	334, 1238, 1646
Hpy188I	TCNGA	4 cut(s)	412, 732, 1978, 2178
Hpy188III	TCNNGA	8 cut(s)	343, 391, 683, 743, 1285, 1314, 1595, 1800
Hpy8I	GTNNAC	3 cut(s)	334, 1238, 1646
HpyAV	CCTTC	5 cut(s)	637, 1556, 1564, 1678, 2226
HpyCH4III	ACNGT	5 cut(s)	30, 1003, 1473, 1508, 2105
HpyF10VI	GCNNNNNNNGC	8 cut(s)	45, 54, 917, 1433, 1598, 1687, 1780, 2193
HpyF3I	CTNAG	8 cut(s)	40, 71, 729, 1252, 1304, 1834, 2057, 2177
Hsp92I	GRCGYC	1 cut(s)	128
HspAI	GCGC	3 cut(s)	86, 164, 920
KpnI	GGTACC	1 cut(s)	327
KroI	GCCGGC	1 cut(s)	356
KroNI	GCCGGC	1 cut(s)	358
Ksp22I	TGATCA	1 cut(s)	345
Kzo9I	GATC	9 cut(s)	318, 345, 412, 528, 787, 1156, 1189, 1603, 1747
LguI	GCTCTTC	1 cut(s)	2136
LmnI	GCTCC	5 cut(s)	854, 948, 1247, 1597, 1687
Lsp1109I	GCAGC	7 cut(s)	100, 285, 909, 946, 1168, 1448, 1750
LweI	GCATC	5 cut(s)	576, 1068, 1354, 1588, 2134
MaeI	CTAG	7 cut(s)	636, 963, 993, 1059, 1082, 1649, 1725
MalI	GATC	9 cut(s)	320, 347, 414, 530, 789, 1158, 1191, 1605, 1749
MbiI	CCGCTC	1 cut(s)	1972
MboI	GATC	9 cut(s)	318, 345, 412, 528, 787, 1156, 1189, 1603, 1747
MboII	GAAGA	8 cut(s)	181, 214, 1489, 1571, 2096, 2123, 2182, 2221
MfeI	CAATTG	2 cut(s)	813, 1152
MhlI	GDGCHC	2 cut(s)	265, 1068
MlyI	GAGTC	3 cut(s)	73, 567, 1589
MmeI	TCCRAC	2 cut(s)	12, 1547
Mph1103I	ATGCAT	1 cut(s)	498
MroNI	GCCGGC	1 cut(s)	356
MseI	TTAA	8 cut(s)	270, 314, 755, 899, 1164, 1299, 1718, 1874
MslI	CAYNNNNRTG	3 cut(s)	230, 384, 1446
MspCI	CTTAAG	1 cut(s)	313
MspI	CCGG	3 cut(s)	357, 461, 1502
MspR9I	CCNGG	5 cut(s)	461, 703, 784, 956, 1009
MunI	CAATTG	2 cut(s)	813, 1152
Mva1269I	GAATGC	3 cut(s)	661, 712, 1018
MvaI	CCWGG	4 cut(s)	703, 784, 956, 1009
MwoI	GCNNNNNNNGC	8 cut(s)	45, 54, 917, 1433, 1598, 1687, 1780, 2193
NaeI	GCCGGC	1 cut(s)	358
NciI	CCSGG	1 cut(s)	461
NdeI	CATATG	1 cut(s)	1693
NdeII	GATC	9 cut(s)	318, 345, 412, 528, 787, 1156, 1189, 1603, 1747
NgoMIV	GCCGGC	1 cut(s)	356
NheI	GCTAGC	1 cut(s)	1724
NlaIV	GGNNCC	4 cut(s)	325, 950, 1249, 1689
NmuCI	GTSAC	5 cut(s)	24, 129, 308, 604, 1096
NsbI	TGCGCA	1 cut(s)	87
NsiI	ATGCAT	1 cut(s)	498
NspI	RCATGY	5 cut(s)	48, 831, 1236, 1539, 1681
PaeI	GCATGC	1 cut(s)	48
PaqCI	CACCTGC	1 cut(s)	1833
PciSI	GCTCTTC	1 cut(s)	2136
PctI	GAATGC	3 cut(s)	661, 712, 1018
PdiI	GCCGGC	1 cut(s)	358
PfeI	GAWTC	4 cut(s)	194, 860, 1743, 2173
PflMI	CCANNNNNTGG	1 cut(s)	1697
PfoI	TCCNGGA	1 cut(s)	701
PkrI	GCNGC	8 cut(s)	90, 168, 300, 924, 961, 1183, 1438, 1765
PleI	GAGTC	3 cut(s)	72, 567, 1588
PpsI	GAGTC	3 cut(s)	72, 567, 1588
PshBI	ATTAAT	1 cut(s)	1874
Psp124BI	GAGCTC	1 cut(s)	1068
Psp6I	CCWGG	4 cut(s)	701, 782, 954, 1007
PspFI	CCCAGC	2 cut(s)	1697, 2187
PspGI	CCWGG	4 cut(s)	701, 782, 954, 1007
PspN4I	GGNNCC	4 cut(s)	325, 950, 1249, 1689
PspPI	GGNCC	2 cut(s)	458, 1504
PstI	CTGCAG	1 cut(s)	303
RsaI	GTAC	6 cut(s)	325, 335, 539, 1340, 2033, 2098
RsaNI	GTAC	6 cut(s)	324, 334, 538, 1339, 2032, 2097
RseI	CAYNNNNRTG	3 cut(s)	230, 384, 1446
Rsr2I	CGGWCCG	1 cut(s)	1504
RsrII	CGGWCCG	1 cut(s)	1504
SacI	GAGCTC	1 cut(s)	1068
SapI	GCTCTTC	1 cut(s)	2136
SaqAI	TTAA	8 cut(s)	270, 314, 755, 899, 1164, 1299, 1718, 1874
SatI	GCNGC	8 cut(s)	89, 167, 299, 923, 960, 1182, 1437, 1764
Sau3AI	GATC	9 cut(s)	318, 345, 412, 528, 787, 1156, 1189, 1603, 1747
Sau96I	GGNCC	2 cut(s)	458, 1504
SchI	GAGTC	3 cut(s)	73, 567, 1589
ScrFI	CCNGG	5 cut(s)	461, 703, 784, 956, 1009
SduI	GDGCHC	2 cut(s)	265, 1068
SfaNI	GCATC	5 cut(s)	576, 1068, 1354, 1588, 2134
SfcI	CTRYAG	1 cut(s)	299
SinI	GGWCC	1 cut(s)	1504
SmiMI	CAYNNNNRTG	3 cut(s)	230, 384, 1446
SmlI	CTYRAG	1 cut(s)	313
SmoI	CTYRAG	1 cut(s)	313
SphI	GCATGC	1 cut(s)	48
SsiI	CCGC	7 cut(s)	167, 720, 889, 1230, 1972, 2000, 2295
SspI	AATATT	1 cut(s)	242
SspMI	CTAG	7 cut(s)	636, 963, 993, 1059, 1082, 1649, 1725
SstI	GAGCTC	1 cut(s)	1068
StyD4I	CCNGG	5 cut(s)	459, 701, 782, 954, 1007
TaaI	ACNGT	5 cut(s)	30, 1003, 1473, 1508, 2105
TaqI	TCGA	7 cut(s)	20, 192, 1109, 1475, 1636, 1671, 1746
TatI	WGTACW	1 cut(s)	1338
TauI	GCSGC	1 cut(s)	169
TfiI	GAWTC	4 cut(s)	194, 860, 1743, 2173
Tru1I	TTAA	8 cut(s)	270, 314, 755, 899, 1164, 1299, 1718, 1874
Tru9I	TTAA	8 cut(s)	270, 314, 755, 899, 1164, 1299, 1718, 1874
TscAI	CASTG	8 cut(s)	138, 265, 308, 1006, 2110, 2160, 2273, 2281
TseFI	GTSAC	5 cut(s)	24, 129, 308, 604, 1096
TseI	GCWGC	7 cut(s)	88, 298, 922, 959, 1181, 1436, 1763
Tsp45I	GTSAC	5 cut(s)	24, 129, 308, 604, 1096
TspGWI	ACGGA	1 cut(s)	149
TspRI	CASTG	8 cut(s)	138, 265, 308, 1006, 2110, 2160, 2273, 2281
Van91I	CCANNNNNTGG	1 cut(s)	1697
Vha464I	CTTAAG	1 cut(s)	313
VpaK11BI	GGWCC	1 cut(s)	1504
VspI	ATTAAT	1 cut(s)	1874
XapI	RAATTY	6 cut(s)	4, 100, 678, 1490, 1731, 2023
XceI	RCATGY	5 cut(s)	48, 831, 1236, 1539, 1681
XspI	CTAG	7 cut(s)	636, 963, 993, 1059, 1082, 1649, 1725
Zsp2I	ATGCAT	1 cut(s)	498

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.