Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0001656

Physical Location & Seq

Genomic Coordinates Forward (+)

31372052 .. 31376917

Gene Structure 4866 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1242500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGGCGGCTGGTGATGGTGGTGGTCAGGTGGTGAAAGTTAAGAGGGAGAAACTGGAGGCATGCATGACGTGCCCTCTTTGTAATAAGCTGTTGAAGGAGGCTACAACTATTTCACTCTGCCTCCACACGTTTTGCAGGGTGTGCATTTACGAAAAGTTATCTGATGAGGAGGGGGACTGCTGTCCCGTCTGTGAAATTGATCTCGGAATTTTACCTGTCGAAAAACTCAGGCCAGACCATAATTTGCACGATATTATAGCCAAGATATTTCCCGTTAAAGGAAAGAAAGTTGATACACCTGAAGCTAACAAGCCCGAAGCTAATGATCCTGATGTTACGCCATCTTCGTTGCCAGTGAAAAGGAAGGAGAGATCATTATCTTCATTGGTAGTCAGTGCCCCCAAAGTTCCAGTGCAGTCAGGTATGACTGGAAAGAGGTCAAGAGCTTTGTCAAGAAAGGGTGCTGCTTTACGAGGATGCAGTTTTTCTGCTGAAGAACCTGCGAAGAAGGATGATTCTACAGAAGACCATCCAATGAGCTCTAACTCAACTGGTAATCTTGTTGAATTCGCACGAAATAAGAGCCAGGATTTGCTTGAGCATTCATATGAGCAAAATCCTAACAAAGTTATGAACAGTGACGTTGAAATAACAGAAGGGAAAGCTGACCTGTGGACGCCCTTAAACTGTCTTGTAGAGGCTGCTAATCGAACCAAGTCCTCAAAGTCAAATTCACAAGGGTTGCATGCCACGTCAGATCCAATCAATTCCATTGATAATGAACTTTATATGTCTCAAAATAAGGCTGAAGGAGAATCACCAAATGCTCTGGACTGCATCAGGAATGCATATACGCCCAAAACCAAAAAAAAGGAGGCCAACCAGAATGCAAGAGGAAAAAATAATAGTAACGGAGCAGGGGCATCAGGACCGGTGAAACGTAAAAGGGTGCGCGCAGCTAATCAGAAGAGGGTAGCAGCATCTGGGGAAGCAAGTGCCTCAACTCAACCTATGCTGGATATATGTGGGGCTAAGTATAGAAATGTTCCTGTTTGGTTCTCCTTGGTAGCATCTGAAGACTGGAAAGGAGAAATTTCATTGCCACAGATATCAGCATGTTGCTTGAAAATAAAGGATGGTAAAATGCCCGTATCAATAATCCAGAAGTACCTTGCAATGAAACTTGAACTTAGCAGTGAAAATGAGGTAGAGATACTGTGTCGGGGTCAGCCGGTGCTTCCAACATGCCATCTAGAAACCCTAGTTGAGATGTGGTGCCGAACAGCACCAACAACGAAAAAGGTACCGGCAACAGTTGGCTCCTCGGCTAAAGATTTTGTGATGGTCCTCAATTATTGTCGTAGGGTTCAAAATCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009987 GO:0010035 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050896 GO:0051865 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_2

Protein Analysis

460

Amino Acids

50.07

Weight (kDa)

8.72

Isoelectric Point (pI)

48.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_2	PF13923	24 - 64	6.2e-07	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	24 - 64	1.4e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001656)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06770 AT1G06770 AT1G06770 AT2G30580 AT2G30580 AT2G30580
fragaria_vesca	FvH4_2g22360 FvH4_2g22360 FvH4_2g22360 FvH4_2g22360 FvH4_2g22360 FvH4_2g22360 FvH4_2g22360 FvH4_2g22360 FvH4_2g22400 FvH4_6g02710 FvH4_6g02710
malus_domestica	MD04G1225500.v1.1 MD05G1204700.v1.1 MD10G1191800.v1.1 MD12G1242500.v1.1
prunus_persica	Prupe.6G344100_v2.0.a1 Prupe.6G344100_v2.0.a1 Prupe.8G231300_v2.0.a1
pyrus_communis	pycom04g19880 pycom05g19090 pycom10g16540 pycom12g22160
rosa_chinensis	RchiOBHm_Chr3g0450721 RchiOBHm_Chr6g0289351
rosa_laevigata	RLG00000012310 RLG00000025707
rosa_multiflora	Rmu_sc0000078.1_g000029 Rmu_sc0041561.1_g000001
rosa_roxburghii	Rroxscaffold_6G00428390 Rroxscaffold_7G00179330
rosa_rugosa	Rorug02G0629900 Rorug02G0630000 Rorug06G0202900
rosa_samantha	Rh3AG030800 Rh3BG031300 Rh3CG030100 Rh3DG031000 Rh6AG313800 Rh6BG321300 Rh6CG327600 Rh6DG313200
rosa_wichuraiana	Rw3G002380 Rw6G027130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	508
Acc65I	GGTACC	1 cut(s)	1303
AccB1I	GGYRCC	2 cut(s)	1275, 1303
AccII	CGCG	1 cut(s)	954
AciI	CCGC	1 cut(s)	5
AclWI	GGATC	2 cut(s)	320, 752
AcsI	RAATTY	4 cut(s)	207, 566, 730, 1092
AcuI	CTGAAG	4 cut(s)	321, 513, 828, 1095
AcyI	GRCGYC	1 cut(s)	677
AfaI	GTAC	2 cut(s)	1169, 1305
AfiI	CCNNNNNNNGG	1 cut(s)	278
AflIII	ACRYGT	1 cut(s)	126
AgeI	ACCGGT	1 cut(s)	931
AgsI	TTSAA	6 cut(s)	94, 566, 647, 1126, 1187, 1370
AjiI	CACGTC	2 cut(s)	69, 753
AjnI	CCWGG	1 cut(s)	585
AluBI	AGCT	7 cut(s)	88, 305, 320, 446, 540, 665, 959
AluI	AGCT	7 cut(s)	88, 305, 320, 446, 540, 665, 959
Alw21I	GWGCWC	1 cut(s)	542
Alw26I	GTCTC	1 cut(s)	798
AlwI	GGATC	2 cut(s)	320, 752
AlwNI	CAGNNNCTG	1 cut(s)	983
AoxI	GGCC	2 cut(s)	230, 876
ApeKI	GCWGC	4 cut(s)	464, 701, 956, 977
ApoI	RAATTY	4 cut(s)	207, 566, 730, 1092
AsiGI	ACCGGT	1 cut(s)	931
Asp718I	GGTACC	1 cut(s)	1303
AspLEI	GCGC	2 cut(s)	954, 956
AspS9I	GGNCC	2 cut(s)	929, 1345
AsuHPI	GGTGA	4 cut(s)	23, 43, 810, 946
AvaII	GGWCC	2 cut(s)	929, 1345
BaeGI	GKGCMC	2 cut(s)	74, 400
BanI	GGYRCC	2 cut(s)	1275, 1303
BanII	GRGCYC	1 cut(s)	542
BbsI	GAAGAC	2 cut(s)	531, 1083
Bbv12I	GWGCWC	1 cut(s)	542
BbvI	GCAGC	4 cut(s)	451, 688, 968, 989
BccI	CCATC	6 cut(s)	8, 349, 537, 1130, 1257, 1336
BciT130I	CCWGG	1 cut(s)	587
BcoDI	GTCTC	1 cut(s)	798
BfaI	CTAG	2 cut(s)	1253, 1262
BfmI	CTRYAG	1 cut(s)	519
BfuAI	ACCTGC	1 cut(s)	508
BisI	GCNGC	5 cut(s)	6, 465, 702, 957, 978
BlsI	GCNGC	5 cut(s)	7, 466, 703, 958, 979
Bme1390I	CCNGG	1 cut(s)	587
Bme18I	GGWCC	2 cut(s)	929, 1345
BmgBI	CACGTC	2 cut(s)	69, 753
BmgT120I	GGNCC	2 cut(s)	929, 1345
BmiI	GGNNCC	3 cut(s)	1277, 1305, 1321
BmrFI	CCNGG	1 cut(s)	587
BmsI	GCATC	5 cut(s)	467, 846, 932, 989, 1079
BoxI	GACNNNNGTC	1 cut(s)	180
BpiI	GAAGAC	2 cut(s)	531, 1083
BpmI	CTGGAG	1 cut(s)	74
BpuEI	CTTGAG	1 cut(s)	617
BsaBI	GATNNNNATC	1 cut(s)	376
BsaHI	GRCGYC	1 cut(s)	677
BsaJI	CCNNGG	2 cut(s)	1062, 1323
BsaWI	WCCGGW	1 cut(s)	931
BsaXI	ACNNNNNCTCC	2 cut(s)	105, 135
Bsc4I	CCNNNNNNNGG	1 cut(s)	278
Bse118I	RCCGGY	3 cut(s)	931, 1231, 1306
Bse1I	ACTGG	6 cut(s)	57, 353, 410, 433, 556, 1085
Bse3DI	GCAATG	2 cut(s)	1097, 1182
Bse8I	GATNNNNATC	1 cut(s)	376
BseBI	CCWGG	1 cut(s)	587
BseDI	CCNNGG	2 cut(s)	1062, 1323
BseGI	GGATG	4 cut(s)	482, 517, 529, 1141
BseJI	GATNNNNATC	1 cut(s)	376
BseLI	CCNNNNNNNGG	1 cut(s)	278
BseMI	GCAATG	2 cut(s)	1097, 1182
BseMII	CTCAG	1 cut(s)	241
BseNI	ACTGG	6 cut(s)	57, 353, 410, 433, 556, 1085
BsePI	GCGCGC	1 cut(s)	952
BseRI	GAGGAG	2 cut(s)	182, 1312
BseSI	GKGCMC	2 cut(s)	74, 400
BseXI	GCAGC	4 cut(s)	451, 688, 968, 989
BsgI	GTGCAG	1 cut(s)	434
Bsh1236I	CGCG	1 cut(s)	954
BshFI	GGCC	2 cut(s)	232, 878
BshNI	GGYRCC	2 cut(s)	1275, 1303
BshTI	ACCGGT	1 cut(s)	931
BsiHKAI	GWGCWC	1 cut(s)	542
BsiSI	CCGG	3 cut(s)	932, 1232, 1307
BslFI	GGGAC	2 cut(s)	168, 188
BslI	CCNNNNNNNGG	1 cut(s)	278
BsmAI	GTCTC	1 cut(s)	798
BsmFI	GGGAC	2 cut(s)	168, 188
BsmI	GAATGC	3 cut(s)	601, 850, 892
BsnI	GGCC	2 cut(s)	232, 878
Bsp1286I	GDGCHC	3 cut(s)	74, 400, 542
Bsp143I	GATC	4 cut(s)	199, 325, 371, 757
BspACI	CCGC	1 cut(s)	5
BspANI	GGCC	2 cut(s)	232, 878
BspCNI	CTCAG	1 cut(s)	240
BspFNI	CGCG	1 cut(s)	954
BspLI	GGNNCC	3 cut(s)	1277, 1305, 1321
BspMI	ACCTGC	1 cut(s)	508
BspPI	GGATC	2 cut(s)	320, 752
BspT107I	GGYRCC	2 cut(s)	1275, 1303
BsrDI	GCAATG	2 cut(s)	1097, 1182
BsrFI	RCCGGY	3 cut(s)	931, 1231, 1306
BsrI	ACTGG	6 cut(s)	57, 353, 410, 433, 556, 1085
BssAI	RCCGGY	3 cut(s)	931, 1231, 1306
BssECI	CCNNGG	2 cut(s)	1062, 1323
BssHII	GCGCGC	1 cut(s)	952
BssMI	GATC	4 cut(s)	199, 325, 371, 757
BssNI	GRCGYC	1 cut(s)	677
BssT1I	CCWWGG	1 cut(s)	1062
Bst2UI	CCWGG	1 cut(s)	587
Bst4CI	ACNGT	4 cut(s)	638, 689, 1218, 1315
Bst6I	CTCTTC	1 cut(s)	962
BstACI	GRCGYC	1 cut(s)	677
BstAPI	GCANNNNNTGC	2 cut(s)	69, 141
BstC8I	GCNNGC	3 cut(s)	61, 747, 954
BstDEI	CTNAG	3 cut(s)	227, 1032, 1190
BstF5I	GGATG	4 cut(s)	482, 517, 529, 1141
BstFNI	CGCG	1 cut(s)	954
BstHHI	GCGC	2 cut(s)	954, 956
BstKTI	GATC	4 cut(s)	202, 328, 374, 760
BstMAI	GTCTC	1 cut(s)	798
BstMBI	GATC	4 cut(s)	199, 325, 371, 757
BstMWI	GCNNNNNNNGC	2 cut(s)	69, 141
BstNI	CCWGG	1 cut(s)	587
BstNSI	RCATGY	4 cut(s)	63, 749, 1119, 1248
BstPAI	GACNNNNGTC	1 cut(s)	180
BstSCI	CCNGG	1 cut(s)	585
BstSFI	CTRYAG	1 cut(s)	519
BstSLI	GKGCMC	2 cut(s)	74, 400
BstUI	CGCG	1 cut(s)	954
BstV1I	GCAGC	4 cut(s)	451, 688, 968, 989
BstV2I	GAAGAC	2 cut(s)	531, 1083
BstX2I	RGATCY	1 cut(s)	757
BstYI	RGATCY	1 cut(s)	757
BsuRI	GGCC	2 cut(s)	232, 878
BtrI	CACGTC	2 cut(s)	69, 753
BtsCI	GGATG	4 cut(s)	482, 517, 529, 1141
BtsI	GCAGTG	1 cut(s)	1201
BtsIMutI	CAGTG	5 cut(s)	360, 400, 417, 643, 1201
BveI	ACCTGC	1 cut(s)	508
Cac8I	GCNNGC	3 cut(s)	61, 747, 954
CaiI	CAGNNNCTG	1 cut(s)	983
CfoI	GCGC	2 cut(s)	954, 956
Cfr10I	RCCGGY	3 cut(s)	931, 1231, 1306
Cfr13I	GGNCC	2 cut(s)	929, 1345
CseI	GACGC	1 cut(s)	685
Csp6I	GTAC	2 cut(s)	1168, 1304
CspAI	ACCGGT	1 cut(s)	931
CspCI	CAANNNNNGTGG	2 cut(s)	113, 148
CviAII	CATG	5 cut(s)	60, 64, 746, 1116, 1245
CviQI	GTAC	2 cut(s)	1168, 1304
DdeI	CTNAG	3 cut(s)	227, 1032, 1190
DpnI	GATC	4 cut(s)	201, 327, 373, 759
DpnII	GATC	4 cut(s)	199, 325, 371, 757
Eam1104I	CTCTTC	1 cut(s)	962
EarI	CTCTTC	1 cut(s)	962
Ecl136II	GAGCTC	1 cut(s)	540
Eco130I	CCWWGG	1 cut(s)	1062
Eco24I	GRGCYC	1 cut(s)	542
Eco32I	GATATC	1 cut(s)	1110
Eco47I	GGWCC	2 cut(s)	929, 1345
Eco53kI	GAGCTC	1 cut(s)	540
Eco57I	CTGAAG	4 cut(s)	321, 513, 828, 1095
EcoICRI	GAGCTC	1 cut(s)	540
EcoRI	GAATTC	1 cut(s)	566
EcoRII	CCWGG	1 cut(s)	585
EcoRV	GATATC	1 cut(s)	1110
EcoT14I	CCWWGG	1 cut(s)	1062
EcoT22I	ATGCAT	2 cut(s)	65, 850
EcoT38I	GRGCYC	1 cut(s)	542
ErhI	CCWWGG	1 cut(s)	1062
FaeI	CATG	5 cut(s)	63, 67, 749, 1119, 1248
FaqI	GGGAC	2 cut(s)	168, 188
FatI	CATG	5 cut(s)	59, 63, 745, 1115, 1244
FauNDI	CATATG	1 cut(s)	607
Fnu4HI	GCNGC	5 cut(s)	6, 465, 702, 957, 978
FokI	GGATG	4 cut(s)	489, 516, 524, 1148
FriOI	GRGCYC	1 cut(s)	542
Fsp4HI	GCNGC	5 cut(s)	6, 465, 702, 957, 978
FspBI	CTAG	2 cut(s)	1253, 1262
GlaI	GCGC	2 cut(s)	953, 955
GluI	GCNGC	5 cut(s)	6, 465, 702, 957, 978
GsuI	CTGGAG	1 cut(s)	74
HaeIII	GGCC	2 cut(s)	232, 878
HapII	CCGG	3 cut(s)	932, 1232, 1307
HgaI	GACGC	1 cut(s)	685
HhaI	GCGC	2 cut(s)	954, 956
Hin1I	GRCGYC	1 cut(s)	677
Hin1II	CATG	5 cut(s)	63, 67, 749, 1119, 1248
Hin6I	GCGC	2 cut(s)	952, 954
HinP1I	GCGC	2 cut(s)	952, 954
HinfI	GANTC	2 cut(s)	515, 815
HpaII	CCGG	3 cut(s)	932, 1232, 1307
HphI	GGTGA	4 cut(s)	23, 43, 810, 946
Hpy166II	GTNNAC	1 cut(s)	675
Hpy188I	TCNGA	5 cut(s)	163, 206, 757, 966, 1075
Hpy188III	TCNNGA	8 cut(s)	329, 441, 453, 830, 841, 927, 1162, 1253
Hpy8I	GTNNAC	1 cut(s)	675
HpyAV	CCTTC	5 cut(s)	88, 358, 502, 650, 803
HpyCH4III	ACNGT	4 cut(s)	638, 689, 1218, 1315
HpyCH4IV	ACGT	5 cut(s)	68, 128, 642, 752, 940
HpyF10VI	GCNNNNNNNGC	2 cut(s)	69, 141
HpyF3I	CTNAG	3 cut(s)	227, 1032, 1190
HpySE526I	ACGT	5 cut(s)	68, 128, 642, 752, 940
Hsp92I	GRCGYC	1 cut(s)	677
Hsp92II	CATG	5 cut(s)	63, 67, 749, 1119, 1248
HspAI	GCGC	2 cut(s)	952, 954
KpnI	GGTACC	1 cut(s)	1307
Kzo9I	GATC	4 cut(s)	199, 325, 371, 757
LmnI	GCTCC	2 cut(s)	914, 1325
Lsp1109I	GCAGC	4 cut(s)	451, 688, 968, 989
LweI	GCATC	5 cut(s)	467, 846, 932, 989, 1079
MaeI	CTAG	2 cut(s)	1253, 1262
MaeII	ACGT	5 cut(s)	68, 128, 642, 752, 940
MaeIII	GTNAC	3 cut(s)	334, 638, 908
MalI	GATC	4 cut(s)	201, 327, 373, 759
MboI	GATC	4 cut(s)	199, 325, 371, 757
MboII	GAAGA	7 cut(s)	336, 372, 506, 517, 536, 979, 1088
MflI	RGATCY	1 cut(s)	757
MhlI	GDGCHC	3 cut(s)	74, 400, 542
MluCI	AATT	8 cut(s)	195, 207, 241, 566, 730, 766, 1092, 1351
MmeI	TCCRAC	1 cut(s)	1265
Mph1103I	ATGCAT	2 cut(s)	65, 850
MseI	TTAA	3 cut(s)	39, 276, 683
MslI	CAYNNNNRTG	1 cut(s)	606
MspI	CCGG	3 cut(s)	932, 1232, 1307
MspR9I	CCNGG	1 cut(s)	587
Mva1269I	GAATGC	3 cut(s)	601, 850, 892
MvaI	CCWGG	1 cut(s)	587
MvnI	CGCG	1 cut(s)	954
MwoI	GCNNNNNNNGC	2 cut(s)	69, 141
NdeI	CATATG	1 cut(s)	607
NdeII	GATC	4 cut(s)	199, 325, 371, 757
NlaIII	CATG	5 cut(s)	63, 67, 749, 1119, 1248
NlaIV	GGNNCC	3 cut(s)	1277, 1305, 1321
NmeAIII	GCCGAG	1 cut(s)	1304
NmuCI	GTSAC	1 cut(s)	638
NsiI	ATGCAT	2 cut(s)	65, 850
NspI	RCATGY	4 cut(s)	63, 749, 1119, 1248
PaeI	GCATGC	2 cut(s)	63, 749
PauI	GCGCGC	1 cut(s)	952
PcsI	WCGNNNNNNNCGW	1 cut(s)	344
PctI	GAATGC	3 cut(s)	601, 850, 892
PfeI	GAWTC	2 cut(s)	515, 815
PinAI	ACCGGT	1 cut(s)	931
PkrI	GCNGC	5 cut(s)	7, 466, 703, 958, 979
PshAI	GACNNNNGTC	1 cut(s)	180
Psp124BI	GAGCTC	1 cut(s)	542
Psp6I	CCWGG	1 cut(s)	585
PspGI	CCWGG	1 cut(s)	585
PspN4I	GGNNCC	3 cut(s)	1277, 1305, 1321
PspPI	GGNCC	2 cut(s)	929, 1345
PstNI	CAGNNNCTG	1 cut(s)	983
PsuI	RGATCY	1 cut(s)	757
PteI	GCGCGC	1 cut(s)	952
RsaI	GTAC	2 cut(s)	1169, 1305
RsaNI	GTAC	2 cut(s)	1168, 1304
RseI	CAYNNNNRTG	1 cut(s)	606
SacI	GAGCTC	1 cut(s)	542
SaqAI	TTAA	3 cut(s)	39, 276, 683
SatI	GCNGC	5 cut(s)	6, 465, 702, 957, 978
Sau3AI	GATC	4 cut(s)	199, 325, 371, 757
Sau96I	GGNCC	2 cut(s)	929, 1345
ScrFI	CCNGG	1 cut(s)	587
SduI	GDGCHC	3 cut(s)	74, 400, 542
SfaNI	GCATC	5 cut(s)	467, 846, 932, 989, 1079
SfcI	CTRYAG	1 cut(s)	519
SinI	GGWCC	2 cut(s)	929, 1345
SmiMI	CAYNNNNRTG	1 cut(s)	606
SmlI	CTYRAG	1 cut(s)	596
SmoI	CTYRAG	1 cut(s)	596
SphI	GCATGC	2 cut(s)	63, 749
Sse9I	AATT	8 cut(s)	195, 207, 241, 566, 730, 766, 1092, 1351
SsiI	CCGC	1 cut(s)	5
SspMI	CTAG	2 cut(s)	1253, 1262
SstI	GAGCTC	1 cut(s)	542
StyD4I	CCNGG	1 cut(s)	585
StyI	CCWWGG	1 cut(s)	1062
TaaI	ACNGT	4 cut(s)	638, 689, 1218, 1315
TaiI	ACGT	5 cut(s)	71, 131, 645, 755, 943
TaqI	TCGA	2 cut(s)	219, 709
TasI	AATT	8 cut(s)	195, 207, 241, 566, 730, 766, 1092, 1351
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	2 cut(s)	515, 815
Tru1I	TTAA	3 cut(s)	39, 276, 683
Tru9I	TTAA	3 cut(s)	39, 276, 683
TscAI	CASTG	5 cut(s)	360, 400, 417, 643, 1201
TseFI	GTSAC	1 cut(s)	638
TseI	GCWGC	4 cut(s)	464, 701, 956, 977
Tsp45I	GTSAC	1 cut(s)	638
TspDTI	ATGAA	6 cut(s)	372, 594, 647, 795, 1086, 1193
TspGWI	ACGGA	1 cut(s)	927
TspRI	CASTG	5 cut(s)	360, 400, 417, 643, 1201
VpaK11BI	GGWCC	2 cut(s)	929, 1345
XapI	RAATTY	4 cut(s)	207, 566, 730, 1092
XbaI	TCTAGA	1 cut(s)	1252
XceI	RCATGY	4 cut(s)	63, 749, 1119, 1248
XspI	CTAG	2 cut(s)	1253, 1262
Zsp2I	ATGCAT	2 cut(s)	65, 850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.