Rorug06G0202900

May be involved in both secretory and endocytic intracellular trafficking in the endosomal prevacuolar compartments

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001656
Physical Location & Seq
Reverse (-)
32517123 .. 32530193
13071 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0202900.1

Sequence Viewer

Length: 1869 bp
ATGGGAAGTAATAGGGGAAGTAATGGTTTAGACCATCCTTTGAAACATTCCGAAGATGAAGGTGTTAGCAGCCCAGGACAGAGTTCTTTTCGGAAGGCAGAGACTCAGAAGACAAATTCGGTGAGGCGTTCTTCGGTTTTGGAGATTTTTCAGTCAAAAGAGTTCAATGTTGATTCTTCACCTCAGAGAGGCTTGGACCATTGGATCACTGCACCTATTGGAACTCCCAAGAATTTGTTAATTGATGATCACGAGATTAAATTCTCTAGGTCGATGACGGAGAGGAGGGAGAGTCGCAGGCATGACCTAAAGCTGGATAGACTATCTGAACGTGAAAAGAAAAAACTGATTGTTGAGATGGTCAAGATACAAAATGATGGAACAGTAGAAGTTGATTTAGAGAGAAGTGCACCTGTTGCATCTGAATTGTTAGAGCTTCATTCTGTTGAAGATGTGCCAATCTATTTAGAAGATACAACTTCCAGTACAACAAAATCAATTCCAAGATTGAAAATTGCCATGCTTGTGGTTGGAACAAGAGGAGATGTACAGCCTTTTCTGGCTATGGCGAAGAGATTTCAGGAATTTGGTCACCGTGTTAGGTTGGCAACTCATGCTAACTTCAGCACTTTTGTAAAATCAGCTGGTGTAGAATTTTATCCTTTGGGCGGTGATCCTCGTGTTTTGGCAGGATATATGGCCAGAAATAAAGGTCTCATTCCATCTGGACCCGGAGAAATATCTATACAAAGAAAGCAACTAAAGGCAATTATTGAGTCTCTTCTTCCGGCATGCACTGAGCCAGATATCGAAACTGGAGTACCTTTTAAGGCACAGGCAATTATTGCAAATCCTCCTGCTTATGGACATGCACATGTTGCTGAAGCTCTTGGAGTACCCCTTCACATTTTCTTCACAATGCCATGGACGCCTACTTATGAATTCCCTCACCCACTTGCACGTGTACCTCAAAGTGCTGGTTATTGGCTTTCATATATTGTTGTGGATTTACTGATATGGTGGGGCATTAGGAGTTATATAAATGACTTCAGGAAAAAAAAGTTAAAGCTTGCTCCTATTGCATACTTCAGCACATACCATGGATCAATATCTCATTTGCCAACAGGGTATATGTGGAGTCCTCATGTTGTACCAAAACCAAGTGATTGGGGATCTTTAGTGGATGTTGTTGGTTATTGTTTCTTAAACCTTGGATCGAAGTATCAACCTCAAGACGAGTTTGTTCAGTGGATTCAGAAAGGGCCGAAACCTATCTATATTGGCTTTGGAAGCATGCCCCTTGATGATCCCAAGCAAACTACTGATATTATATTGGAGGCGTTGAAAGACACTGGACAGAGAGGAATAATTGATAAAGGTTGGGGAGACCTAGGGAATTTAACAGAAGCATCCGACAGTGTTTTCCTTTTGGAGGACTGCCCTCATGATTGGCTGTTTCCTCAATGTTCAGCAGTGGTTCATCATGGTGGTGCTGGAACCACAGCTACAGGATTAAGAGCTGGGTGTCCAACAACCATAGTGCCATTCTTTGGAGATCAGTTCTTCTGGGGTGATAGGATACATGAGAAAGGATTGGGACCTTCACCAATACCTATATCCCAGCTCAACGTTGAGAGCCTTTCAAATGCTATTAAATTTATGCTGGAGCCAGAGGTTAAATCTCGAGCACTAGAAATAGCAAAGTTGATAGAAAATGAAGACGGTGTTGCAGCTGCAGTTGATGCATTTCACCGGCAATTACCTCATGAGCTACCATTACCAACTGCATCTTCAGAAGAAGATGAACCTGCAAACCCTTTGCAGTGGCTCTTTCTTCAAATTGAGAAATGGTGCTGCCCTTCAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PRA1

Protein Analysis

622

Amino Acids

69.24

Weight (kDa)

6.04

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_28 PF03033 172 - 315 6.6e-33 Glycosyltransferase family 28 N-terminal domain
UDPGT PF00201 425 - 566 2.1e-06 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 467 - 557 8.2e-13 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1816
AccB7I CCANNNNNTGG 1 cut(s) 1550
AciI CCGC 1 cut(s) 669
AclI AACGTT 1 cut(s) 1629
AclWI GGATC 6 cut(s) 212, 668, 1111, 1180, 1222, 1301
AcoI YGGCCR 1 cut(s) 699
AcsI RAATTY 8 cut(s) 115, 232, 260, 584, 653, 941, 1396, 1655
AcuI CTGAAG 5 cut(s) 607, 903, 1033, 1072, 1776
AcvI CACGTG 1 cut(s) 962
AcyI GRCGYC 1 cut(s) 929
AfaI GTAC 6 cut(s) 487, 549, 822, 897, 966, 1152
AfiI CCNNNNNNNGG 6 cut(s) 188, 313, 668, 863, 1432, 1550
AflIII ACRYGT 2 cut(s) 874, 961
AgsI TTSAA 8 cut(s) 43, 166, 449, 511, 1345, 1644, 1838, 1863
AjnI CCWGG 1 cut(s) 73
AjuI GAANNNNNNNTTGG 2 cut(s) 1774, 1806
Alw21I GWGCWC 2 cut(s) 412, 1690
Alw26I GTCTC 4 cut(s) 95, 719, 783, 1380
Alw44I GTGCAC 1 cut(s) 408
AlwI GGATC 6 cut(s) 212, 668, 1111, 1180, 1222, 1301
Ama87I CYCGRG 1 cut(s) 1683
AoxI GGCC 2 cut(s) 699, 1262
ApaLI GTGCAC 1 cut(s) 408
ApeKI GCWGC 4 cut(s) 69, 1730, 1733, 1854
ApoI RAATTY 8 cut(s) 115, 232, 260, 584, 653, 941, 1396, 1655
AspA2I CCTAGG 1 cut(s) 1390
AspS9I GGNCC 4 cut(s) 196, 728, 1262, 1598
AsuC2I CCSGG 1 cut(s) 732
AsuHPI GGTGA 8 cut(s) 133, 171, 584, 683, 941, 1583, 1596, 1742
AvaI CYCGRG 1 cut(s) 1683
AvaII GGWCC 3 cut(s) 196, 728, 1598
AvrII CCTAGG 1 cut(s) 1390
BaeGI GKGCMC 1 cut(s) 412
BaeI ACNNNNGTAYC 2 cut(s) 804, 837
BalI TGGCCA 1 cut(s) 701
BauI CACGAG 2 cut(s) 251, 678
BbrPI CACGTG 1 cut(s) 962
BbsI GAAGAC 2 cut(s) 116, 1725
Bbv12I GWGCWC 2 cut(s) 412, 1690
BbvI GCAGC 4 cut(s) 81, 1720, 1742, 1841
BccI CCATC 4 cut(s) 42, 352, 371, 730
BciT130I CCWGG 1 cut(s) 75
BciVI GTATCC 1 cut(s) 1572
BclI TGATCA 1 cut(s) 247
BcnI CCSGG 1 cut(s) 732
BcoDI GTCTC 4 cut(s) 95, 719, 783, 1380
BfaI CTAG 3 cut(s) 267, 1391, 1691
BfmI CTRYAG 2 cut(s) 1506, 1734
BfuAI ACCTGC 1 cut(s) 1816
BfuI GTATCC 1 cut(s) 1572
BisI GCNGC 4 cut(s) 70, 1731, 1734, 1855
BlnI CCTAGG 1 cut(s) 1390
BlsI GCNGC 4 cut(s) 71, 1732, 1735, 1856
Bme1390I CCNGG 2 cut(s) 75, 732
Bme18I GGWCC 3 cut(s) 196, 728, 1598
BmeT110I CYCGRG 1 cut(s) 1683
BmgT120I GGNCC 4 cut(s) 196, 728, 1262, 1598
BmiI GGNNCC 4 cut(s) 730, 1498, 1599, 1668
BmrFI CCNGG 2 cut(s) 75, 732
BmsI GCATC 4 cut(s) 428, 1418, 1732, 1796
BpiI GAAGAC 2 cut(s) 116, 1725
BpmI CTGGAG 2 cut(s) 837, 1685
BpuEI CTTGAG 1 cut(s) 1215
BpuMI CCSGG 1 cut(s) 732
BsaAI YACGTR 1 cut(s) 962
BsaBI GATNNNNATC 1 cut(s) 1108
BsaHI GRCGYC 1 cut(s) 929
BsaI GGTCTC 2 cut(s) 719, 1380
BsaJI CCNNGG 5 cut(s) 73, 923, 1099, 1210, 1390
BsaXI ACNNNNNCTCC 2 cut(s) 277, 307
Bsc4I CCNNNNNNNGG 6 cut(s) 188, 313, 668, 863, 1432, 1550
Bse118I RCCGGY 1 cut(s) 1752
Bse1I ACTGG 3 cut(s) 483, 820, 1357
Bse8I GATNNNNATC 1 cut(s) 1108
BseBI CCWGG 1 cut(s) 75
BseDI CCNNGG 5 cut(s) 73, 923, 1099, 1210, 1390
BseGI GGATG 3 cut(s) 34, 1189, 1409
BseJI GATNNNNATC 1 cut(s) 1108
BseLI CCNNNNNNNGG 6 cut(s) 188, 313, 668, 863, 1432, 1550
BseMII CTCAG 3 cut(s) 119, 197, 789
BseNI ACTGG 3 cut(s) 483, 820, 1357
BseRI GAGGAG 2 cut(s) 298, 555
BseSI GKGCMC 1 cut(s) 412
BseXI GCAGC 4 cut(s) 81, 1720, 1742, 1841
BseYI CCCAGC 2 cut(s) 1520, 1620
BsgI GTGCAG 1 cut(s) 195
BshFI GGCC 2 cut(s) 701, 1264
BsiHKAI GWGCWC 2 cut(s) 412, 1690
BsiHKCI CYCGRG 1 cut(s) 1683
BsiSI CCGG 3 cut(s) 732, 788, 1753
BslFI GGGAC 1 cut(s) 1611
BslI CCNNNNNNNGG 6 cut(s) 188, 313, 668, 863, 1432, 1550
BsmAI GTCTC 4 cut(s) 95, 719, 783, 1380
BsmFI GGGAC 1 cut(s) 1611
BsnI GGCC 2 cut(s) 701, 1264
Bso31I GGTCTC 2 cut(s) 719, 1380
BsoBI CYCGRG 1 cut(s) 1683
Bsp1286I GDGCHC 2 cut(s) 412, 1690
Bsp1407I TGTACA 1 cut(s) 547
Bsp143I GATC 8 cut(s) 204, 247, 673, 1103, 1172, 1214, 1306, 1555
Bsp19I CCATGG 2 cut(s) 923, 1099
BspACI CCGC 1 cut(s) 669
BspANI GGCC 2 cut(s) 701, 1264
BspCNI CTCAG 3 cut(s) 118, 196, 790
BspHI TCATGA 2 cut(s) 1444, 1765
BspLI GGNNCC 4 cut(s) 730, 1498, 1599, 1668
BspMAI CTGCAG 1 cut(s) 1738
BspMI ACCTGC 1 cut(s) 1816
BspPI GGATC 6 cut(s) 212, 668, 1111, 1180, 1222, 1301
BspTNI GGTCTC 2 cut(s) 719, 1380
BsrFI RCCGGY 1 cut(s) 1752
BsrGI TGTACA 1 cut(s) 547
BsrI ACTGG 3 cut(s) 483, 820, 1357
BssAI RCCGGY 1 cut(s) 1752
BssECI CCNNGG 5 cut(s) 73, 923, 1099, 1210, 1390
BssMI GATC 8 cut(s) 204, 247, 673, 1103, 1172, 1214, 1306, 1555
BssNI GRCGYC 1 cut(s) 929
BssSI CACGAG 2 cut(s) 251, 678
BssT1I CCWWGG 4 cut(s) 923, 1099, 1210, 1390
Bst2BI CACGAG 2 cut(s) 251, 678
Bst2UI CCWGG 1 cut(s) 75
Bst4CI ACNGT 4 cut(s) 385, 596, 1418, 1724
Bst6I CTCTTC 2 cut(s) 566, 786
BstACI GRCGYC 1 cut(s) 929
BstAPI GCANNNNNTGC 5 cut(s) 416, 614, 845, 878, 1742
BstAUI TGTACA 1 cut(s) 547
BstBAI YACGTR 1 cut(s) 962
BstC8I GCNNGC 4 cut(s) 299, 793, 1071, 1295
BstDEI CTNAG 3 cut(s) 105, 183, 798
BstDSI CCRYGG 2 cut(s) 923, 1099
BstEII GGTNACC 1 cut(s) 590
BstENI CCTNNNNNAGG 2 cut(s) 186, 1430
BstF5I GGATG 3 cut(s) 34, 1189, 1409
BstKTI GATC 8 cut(s) 207, 250, 676, 1106, 1175, 1217, 1309, 1558
BstMAI GTCTC 4 cut(s) 95, 719, 783, 1380
BstMBI GATC 8 cut(s) 204, 247, 673, 1103, 1172, 1214, 1306, 1555
BstMWI GCNNNNNNNGC 8 cut(s) 416, 614, 845, 878, 928, 1079, 1290, 1742
BstNI CCWGG 1 cut(s) 75
BstNSI RCATGY 4 cut(s) 795, 872, 878, 1297
BstPI GGTNACC 1 cut(s) 590
BstSCI CCNGG 2 cut(s) 73, 730
BstSFI CTRYAG 2 cut(s) 1506, 1734
BstSLI GKGCMC 1 cut(s) 412
BstV1I GCAGC 4 cut(s) 81, 1720, 1742, 1841
BstV2I GAAGAC 2 cut(s) 116, 1725
BstX2I RGATCY 1 cut(s) 1172
BstXI CCANNNNNNTGG 2 cut(s) 526, 1167
BstYI RGATCY 1 cut(s) 1172
BsuI GTATCC 1 cut(s) 1572
BsuRI GGCC 2 cut(s) 701, 1264
BtgI CCRYGG 2 cut(s) 923, 1099
BtsCI GGATG 3 cut(s) 34, 1189, 1409
BtsI GCAGTG 3 cut(s) 207, 1479, 1829
BtsIMutI CAGTG 7 cut(s) 207, 795, 1253, 1350, 1423, 1479, 1829
BveI ACCTGC 1 cut(s) 1816
Cac8I GCNNGC 4 cut(s) 299, 793, 1071, 1295
CciI TCATGA 2 cut(s) 1444, 1765
Cfr10I RCCGGY 1 cut(s) 1752
Cfr13I GGNCC 4 cut(s) 196, 728, 1262, 1598
CseI GACGC 1 cut(s) 937
Csp6I GTAC 6 cut(s) 486, 548, 821, 896, 965, 1151
CviQI GTAC 6 cut(s) 486, 548, 821, 896, 965, 1151
DdeI CTNAG 3 cut(s) 105, 183, 798
DpnI GATC 8 cut(s) 206, 249, 675, 1105, 1174, 1216, 1308, 1557
DpnII GATC 8 cut(s) 204, 247, 673, 1103, 1172, 1214, 1306, 1555
EaeI YGGCCR 1 cut(s) 699
Eam1104I CTCTTC 2 cut(s) 566, 786
EarI CTCTTC 2 cut(s) 566, 786
Eco130I CCWWGG 4 cut(s) 923, 1099, 1210, 1390
Eco31I GGTCTC 2 cut(s) 719, 1380
Eco32I GATATC 1 cut(s) 808
Eco47I GGWCC 3 cut(s) 196, 728, 1598
Eco57I CTGAAG 5 cut(s) 607, 903, 1033, 1072, 1776
Eco72I CACGTG 1 cut(s) 962
Eco88I CYCGRG 1 cut(s) 1683
Eco91I GGTNACC 1 cut(s) 590
EcoNI CCTNNNNNAGG 2 cut(s) 186, 1430
EcoO109I RGGNCCY 1 cut(s) 1598
EcoO65I GGTNACC 1 cut(s) 590
EcoRI GAATTC 1 cut(s) 941
EcoRII CCWGG 1 cut(s) 73
EcoRV GATATC 1 cut(s) 808
EcoT14I CCWWGG 4 cut(s) 923, 1099, 1210, 1390
EcoT22I ATGCAT 1 cut(s) 1747
ErhI CCWWGG 4 cut(s) 923, 1099, 1210, 1390
FaqI GGGAC 1 cut(s) 1611
FbaI TGATCA 1 cut(s) 247
Fnu4HI GCNGC 4 cut(s) 70, 1731, 1734, 1855
FokI GGATG 3 cut(s) 21, 1196, 1396
Fsp4HI GCNGC 4 cut(s) 70, 1731, 1734, 1855
FspBI CTAG 3 cut(s) 267, 1391, 1691
GluI GCNGC 4 cut(s) 70, 1731, 1734, 1855
GsaI CCCAGC 2 cut(s) 1524, 1624
GsuI CTGGAG 2 cut(s) 837, 1685
HaeIII GGCC 2 cut(s) 701, 1264
HapII CCGG 3 cut(s) 732, 788, 1753
HgaI GACGC 1 cut(s) 937
Hin1I GRCGYC 1 cut(s) 929
HindIII AAGCTT 1 cut(s) 1067
HinfI GANTC 6 cut(s) 103, 173, 292, 776, 1138, 1252
HpaII CCGG 3 cut(s) 732, 788, 1753
HphI GGTGA 8 cut(s) 133, 171, 584, 683, 941, 1583, 1596, 1742
Hpy166II GTNNAC 2 cut(s) 410, 965
Hpy188I TCNGA 9 cut(s) 52, 93, 108, 186, 328, 424, 1257, 1414, 1795
Hpy188III TCNNGA 9 cut(s) 251, 364, 581, 726, 1051, 1232, 1445, 1683, 1766
Hpy8I GTNNAC 2 cut(s) 410, 965
HpyAV CCTTC 5 cut(s) 53, 88, 911, 1611, 1869
HpyCH4III ACNGT 4 cut(s) 385, 596, 1418, 1724
HpyCH4IV ACGT 3 cut(s) 331, 961, 1629
HpyF10VI GCNNNNNNNGC 8 cut(s) 416, 614, 845, 878, 928, 1079, 1290, 1742
HpyF3I CTNAG 3 cut(s) 105, 183, 798
HpySE526I ACGT 3 cut(s) 331, 961, 1629
Hsp92I GRCGYC 1 cut(s) 929
Ksp22I TGATCA 1 cut(s) 247
Kzo9I GATC 8 cut(s) 204, 247, 673, 1103, 1172, 1214, 1306, 1555
LmnI GCTCC 2 cut(s) 1078, 1666
Lsp1109I GCAGC 4 cut(s) 81, 1720, 1742, 1841
LweI GCATC 4 cut(s) 428, 1418, 1732, 1796
MaeI CTAG 3 cut(s) 267, 1391, 1691
MaeII ACGT 3 cut(s) 331, 961, 1629
MaeIII GTNAC 1 cut(s) 590
MalI GATC 8 cut(s) 206, 249, 675, 1105, 1174, 1216, 1308, 1557
MboI GATC 8 cut(s) 204, 247, 673, 1103, 1172, 1214, 1306, 1555
MflI RGATCY 1 cut(s) 1172
MhlI GDGCHC 2 cut(s) 412, 1690
MlsI TGGCCA 1 cut(s) 701
MluNI TGGCCA 1 cut(s) 701
MlyI GAGTC 4 cut(s) 97, 301, 785, 1147
MmeI TCCRAC 3 cut(s) 511, 1437, 1553
Mox20I TGGCCA 1 cut(s) 701
Mph1103I ATGCAT 1 cut(s) 1747
MscI TGGCCA 1 cut(s) 701
MseI TTAA 9 cut(s) 239, 258, 828, 1064, 1205, 1400, 1514, 1653, 1677
MslI CAYNNNNRTG 4 cut(s) 524, 873, 1485, 1488
Msp20I TGGCCA 1 cut(s) 701
MspA1I CMGCKG 2 cut(s) 644, 1733
MspI CCGG 3 cut(s) 732, 788, 1753
MspR9I CCNGG 2 cut(s) 75, 732
MvaI CCWGG 1 cut(s) 75
MwoI GCNNNNNNNGC 8 cut(s) 416, 614, 845, 878, 928, 1079, 1290, 1742
NciI CCSGG 1 cut(s) 732
NcoI CCATGG 2 cut(s) 923, 1099
NdeII GATC 8 cut(s) 204, 247, 673, 1103, 1172, 1214, 1306, 1555
NlaIV GGNNCC 4 cut(s) 730, 1498, 1599, 1668
NmuCI GTSAC 1 cut(s) 590
NsiI ATGCAT 1 cut(s) 1747
NspI RCATGY 4 cut(s) 795, 872, 878, 1297
PaeI GCATGC 2 cut(s) 795, 1297
PaeR7I CTCGAG 1 cut(s) 1683
PagI TCATGA 2 cut(s) 1444, 1765
PciI ACATGT 1 cut(s) 874
PfeI GAWTC 2 cut(s) 173, 1252
PflMI CCANNNNNTGG 1 cut(s) 1550
PkrI GCNGC 4 cut(s) 71, 1732, 1735, 1856
PleI GAGTC 4 cut(s) 97, 300, 784, 1146
PmaCI CACGTG 1 cut(s) 962
PmlI CACGTG 1 cut(s) 962
PpsI GAGTC 4 cut(s) 97, 300, 784, 1146
Ppu21I YACGTR 1 cut(s) 962
PpuMI RGGWCCY 1 cut(s) 1598
PscI ACATGT 1 cut(s) 874
Psp1406I AACGTT 1 cut(s) 1629
Psp5II RGGWCCY 1 cut(s) 1598
Psp6I CCWGG 1 cut(s) 73
PspCI CACGTG 1 cut(s) 962
PspEI GGTNACC 1 cut(s) 590
PspFI CCCAGC 2 cut(s) 1520, 1620
PspGI CCWGG 1 cut(s) 73
PspN4I GGNNCC 4 cut(s) 730, 1498, 1599, 1668
PspPI GGNCC 4 cut(s) 196, 728, 1262, 1598
PspPPI RGGWCCY 1 cut(s) 1598
PsrI GAACNNNNNNTAC 2 cut(s) 1489, 1521
PstI CTGCAG 1 cut(s) 1738
PsuI RGATCY 1 cut(s) 1172
PvuII CAGCTG 2 cut(s) 644, 1733
RsaI GTAC 6 cut(s) 487, 549, 822, 897, 966, 1152
RsaNI GTAC 6 cut(s) 486, 548, 821, 896, 965, 1151
RseI CAYNNNNRTG 4 cut(s) 524, 873, 1485, 1488
SaqAI TTAA 9 cut(s) 239, 258, 828, 1064, 1205, 1400, 1514, 1653, 1677
SatI GCNGC 4 cut(s) 70, 1731, 1734, 1855
Sau3AI GATC 8 cut(s) 204, 247, 673, 1103, 1172, 1214, 1306, 1555
Sau96I GGNCC 4 cut(s) 196, 728, 1262, 1598
SchI GAGTC 4 cut(s) 97, 301, 785, 1147
ScrFI CCNGG 2 cut(s) 75, 732
SduI GDGCHC 2 cut(s) 412, 1690
SfaNI GCATC 4 cut(s) 428, 1418, 1732, 1796
SfcI CTRYAG 2 cut(s) 1506, 1734
Sfr274I CTCGAG 1 cut(s) 1683
SinI GGWCC 3 cut(s) 196, 728, 1598
SlaI CTCGAG 1 cut(s) 1683
SmiMI CAYNNNNRTG 4 cut(s) 524, 873, 1485, 1488
SmlI CTYRAG 2 cut(s) 1230, 1683
SmoI CTYRAG 2 cut(s) 1230, 1683
SphI GCATGC 2 cut(s) 795, 1297
SsiI CCGC 1 cut(s) 669
SspMI CTAG 3 cut(s) 267, 1391, 1691
StyD4I CCNGG 2 cut(s) 73, 730
StyI CCWWGG 4 cut(s) 923, 1099, 1210, 1390
TaaI ACNGT 4 cut(s) 385, 596, 1418, 1724
TaiI ACGT 3 cut(s) 334, 964, 1632
TaqI TCGA 4 cut(s) 272, 810, 1217, 1684
TatI WGTACW 2 cut(s) 485, 547
TfiI GAWTC 2 cut(s) 173, 1252
Tru1I TTAA 9 cut(s) 239, 258, 828, 1064, 1205, 1400, 1514, 1653, 1677
Tru9I TTAA 9 cut(s) 239, 258, 828, 1064, 1205, 1400, 1514, 1653, 1677
TscAI CASTG 7 cut(s) 214, 802, 1253, 1357, 1423, 1479, 1829
TseFI GTSAC 1 cut(s) 590
TseI GCWGC 4 cut(s) 69, 1730, 1733, 1854
Tsp45I GTSAC 1 cut(s) 590
TspDTI ATGAA 7 cut(s) 72, 428, 954, 981, 1469, 1731, 1818
TspGWI ACGGA 1 cut(s) 293
TspRI CASTG 7 cut(s) 214, 802, 1253, 1357, 1423, 1479, 1829
Van91I CCANNNNNTGG 1 cut(s) 1550
VneI GTGCAC 1 cut(s) 408
VpaK11BI GGWCC 3 cut(s) 196, 728, 1598
XagI CCTNNNNNAGG 2 cut(s) 186, 1430
XapI RAATTY 8 cut(s) 115, 232, 260, 584, 653, 941, 1396, 1655
XceI RCATGY 4 cut(s) 795, 872, 878, 1297
XhoI CTCGAG 1 cut(s) 1683
XmaJI CCTAGG 1 cut(s) 1390
XspI CTAG 3 cut(s) 267, 1391, 1691
Zsp2I ATGCAT 1 cut(s) 1747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.