MD13G1120800.v1.1

Domain of unknown function (DUF3444)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0001305
Physical Location & Seq
Reverse (-)
8869935 .. 8872971
3037 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1120800.v1.1.491

Sequence Viewer

Length: 2259 bp
ATGGAGTGCAACAAAGATGAGGCGGCTAGAGCAAAAGAGATTGCGGAAAGAAAGTTCACCGCAAAGGATCTTATGGGAGCAAAGAAATTTGCCTTGAAGGCTCAAACTTTGTTTCCGGGGCTTGAGGGGATTCCCCAAATGTTGGCGACCCTCGATGTGCATATCGCTGCAGAGAACAAAATAAATGGGGAGGCTGATTGGTATGGTATACTTGGTGCGGATCCGAAAGCAGATGATGAGGCGGTGAAGAAACAGTATAGGAAACTAGCTCTTATGCTTCACCCTGATAAGAACAAGTCCGTAGGAGCTGATGGAGCGTTTAAGCTACTATCAGAAGCATGGAGTTTGTTGTCCGATAAATCTAAGAGAGTAGCCTATGACCAGAAGAGGAGAGTACACCAAAGGGTAGCGACTGCGAGTGGGAGTTCACAGGCTCCTCCAGGGGCCAATGGTTACTACAATTTCACAAAAGGTGCAACGTCAGGTGCACAGACTCAGAAGGTTAATACACAGACTCAGAAGAGTACCACACAGACTCAGAAGAGTACCTCACACAATCAGAAGGGTACCTCACGGGCTGGCCGCTCTTCAGCTCCTGCTTCATCTCAAAAACCAAGACCGAATACCTTTTGGACGGTGTGTCATAAATGCAAGATGCAGTATGAGTATCTCAGGATTTATCTTAATCATAATCTTCTTTGCCCGAATTGCCACGAACCATTTCTAGCAGCAGAAATAGCTCCACCACCTACAAATGGTGCCAAGTCAGCTCCACCAAAGCATGAAACAGCTGATAGAATGGGTGTGGGATCTGCAGGTTTCAGTGGTAATCAATCGTACAACCAAAACAACTTCCAATGGGGTCCATTCTCTAAAGCATCGGGTGCTTCTACGGCTGCCCAAGCAGCAAGCGTAGTTAGCCAGGCATATGAGAAAGCGAAGAGAGAGCGCGAGCAGGCTCAAGCAGCATTAAAAAGAGAGGAGTTGCGGAGGAAGCATCAAGCCTCCAAGAATGCTGCGAAGAGAAGAAGAGGAATGGAAGATGTCAGTGTCAGCAGCTACGGAAGGGATGTCACAAATCAAATGGGTGTGGGAGCTGGAGCTGGAGGAGCTGGAACAACTTATTTTTCTGGATCAAATGGAAACGCAAGGCCCAGTATCACAAGGGATATCTCCCAGATTGAAATTCAAAGTTTACTAAGGGACAAGGCTAGAAAAGAAATTCTGAAGAAACTAAATGAATCCACCGTATCCAAGACTGCAGCCAAAGAGATGGGGAATGGGAATGAGAGAGAAAAATCTTTGGGAAACATTGATGTGCATAACAATCAAAAGCAGTCTGGTGAGCCAGTAGACACAAAGAATGGTTCTTCTGACATGAAAGGTTCTGGCATTTCTGGTGTCCGTTCAGATGTAGAAACATTGACAATAAATGTTCCTGATTCTGATTTTCATGACTTTGACAAGGATCGATCAGAGAAGTGTTTTGAAGATAATCAGGTCTGGGCTGCATATGATAATGATGATGGGATGCCAAGGTTTTATGCATTAGTTCAAAAGGTGATTTCTGTGGATCCTTTCACAGTGCGTATCAGCTGGCTAAATTCGAAAACAAATAGTGAACTGGGACCTCTTAACTGGGTATCTTCTGGCTTTTCAAAGACGTGTGGGGAGTTCCGCATAGGGAAATATGAAGTGAGTAATTCACTTAATTCTTTCTCTCACAGAGTTCGGTCAACAAAAGGTCCACGGGGGACTATCTGGATATATCCCAGGAAGGGGGATGTTTGGGCGCTATACCGGAATTGGTCCCCGGACTGGAATGAACTGACAGCTGACAATGTCATTCACAAGTATGACATGGTTGAAGTTGTTGAAGACTTTAGTGAGGACCAAGGTGTGCTTGTGACGCCCTTGGTGAAAGTGGCTGGCTTCAAGACGGTATTTCACCGGCACTTGGATCCCAGAGAGACCAGGAGGATCCCTAGAGAAGAGCTGTTTCGGTTCTCTCATCAAATCCCTTCAAGCTTGATCACGGGTCAGGAAGCTGCAAATGCTCCAAAGGGTTGTCGGGAGCTGGATCCAGCAGCTACTCCATTGGAGCTTCTTAAAGTTATAAACGACCTTAAAGAGGAAGATACGATGGAGGTTGACAAAAAGGGTCAGCAAGTCGATGTAGCAGATGATGGAGAGAATGATACTGGCATAGAGATAGCAGCCAATTCTATTCCCGTCACGGAAGAAGCAAAAGGGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3444 DnaJ

Protein Analysis

753

Amino Acids

82.85

Weight (kDa)

8.93

Isoelectric Point (pI)

31.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 66 - 127 1.9e-20 DnaJ domain
Zn_ribbon_20 PF23551 210 - 243 3.2e-20 Zinc beta-ribbon domain
DUF3444 PF11926 476 - 682 1.1e-80 Domain of unknown function (DUF3444)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2117
Acc36I ACCTGC 1 cut(s) 806
Acc65I GGTACC 1 cut(s) 566
AccB1I GGYRCC 2 cut(s) 566, 758
AccB7I CCANNNNNTGG 1 cut(s) 142
AccBSI CCGCTC 1 cut(s) 585
AccI GTMKAC 2 cut(s) 208, 1353
AccII CGCG 1 cut(s) 951
AciI CCGC 8 cut(s) 23, 44, 60, 218, 242, 583, 988, 1678
AcoI YGGCCR 1 cut(s) 580
AcsI RAATTY 4 cut(s) 86, 1185, 1221, 1603
AcuI CTGAAG 2 cut(s) 573, 1247
AcyI GRCGYC 1 cut(s) 1910
AfaI GTAC 5 cut(s) 396, 526, 547, 568, 839
AfiI CCNNNNNNNGG 7 cut(s) 142, 755, 1778, 1779, 1818, 1957, 2131
AflIII ACRYGT 1 cut(s) 1664
AhdI GACNNNNNGTC 1 cut(s) 639
AjiI CACGTC 1 cut(s) 1665
AjnI CCWGG 4 cut(s) 439, 921, 1772, 1973
AloI GAACNNNNNNTCC 2 cut(s) 38, 70
Alw21I GWGCWC 1 cut(s) 490
Alw26I GTCTC 1 cut(s) 1964
Alw44I GTGCAC 1 cut(s) 486
AlwNI CAGNNNCTG 1 cut(s) 596
AoxI GGCC 3 cut(s) 444, 580, 1151
ApaLI GTGCAC 1 cut(s) 486
ApoI RAATTY 4 cut(s) 86, 1185, 1221, 1603
Asp700I GAANNNNTTC 1 cut(s) 720
Asp718I GGTACC 1 cut(s) 566
AspLEI GCGC 2 cut(s) 951, 1795
AspS9I GGNCC 7 cut(s) 444, 863, 1152, 1628, 1745, 1809, 1891
AsuC2I CCSGG 2 cut(s) 117, 1814
AsuHPI GGTGA 7 cut(s) 49, 256, 272, 1355, 1573, 1930, 1940
AsuII TTCGAA 1 cut(s) 1607
AvaII GGWCC 5 cut(s) 863, 1628, 1745, 1809, 1891
BaeGI GKGCMC 1 cut(s) 490
BamHI GGATCC 5 cut(s) 220, 1573, 1960, 1980, 2080
BanI GGYRCC 2 cut(s) 566, 758
BbsI GAAGAC 1 cut(s) 1884
Bbv12I GWGCWC 1 cut(s) 490
BccI CCATC 5 cut(s) 305, 1267, 1520, 2137, 2180
BceAI ACGGC 1 cut(s) 909
BciT130I CCWGG 4 cut(s) 441, 923, 1774, 1975
BciVI GTATCC 1 cut(s) 1261
BclI TGATCA 1 cut(s) 2031
BcnI CCSGG 2 cut(s) 117, 1814
BcoDI GTCTC 1 cut(s) 1964
BfaI CTAG 5 cut(s) 27, 266, 725, 1212, 1986
BfmI CTRYAG 3 cut(s) 168, 813, 1260
BfoI RGCGCY 1 cut(s) 1796
BfuAI ACCTGC 1 cut(s) 806
BfuI GTATCC 1 cut(s) 1261
BglI GCCNNNNNGGC 1 cut(s) 98
Bme1390I CCNGG 6 cut(s) 117, 441, 923, 1774, 1814, 1975
Bme18I GGWCC 5 cut(s) 863, 1628, 1745, 1809, 1891
BmeRI GACNNNNNGTC 1 cut(s) 639
BmgBI CACGTC 1 cut(s) 1665
BmgT120I GGNCC 7 cut(s) 444, 863, 1152, 1628, 1745, 1809, 1891
BmrFI CCNGG 6 cut(s) 117, 441, 923, 1774, 1814, 1975
BmrI ACTGGG 3 cut(s) 1149, 1634, 1648
BmsI GCATC 4 cut(s) 645, 887, 1006, 1521
BmuI ACTGGG 3 cut(s) 1149, 1634, 1648
BpiI GAAGAC 1 cut(s) 1884
BpmI CTGGAG 3 cut(s) 423, 1119, 1125
Bpu14I TTCGAA 1 cut(s) 1607
BpuEI CTTGAG 2 cut(s) 143, 945
BpuMI CCSGG 2 cut(s) 117, 1814
Bsa29I ATCGAT 1 cut(s) 1471
BsaHI GRCGYC 1 cut(s) 1910
BsaI GGTCTC 1 cut(s) 1964
BsaJI CCNNGG 8 cut(s) 116, 440, 1535, 1748, 1772, 1812, 1894, 1914
BsaWI WCCGGW 1 cut(s) 1800
Bsc4I CCNNNNNNNGG 7 cut(s) 142, 755, 1778, 1779, 1818, 1957, 2131
Bse118I RCCGGY 1 cut(s) 1950
Bse1I ACTGG 6 cut(s) 1155, 1349, 1629, 1643, 1823, 2206
BseBI CCWGG 4 cut(s) 441, 923, 1774, 1975
BseCI ATCGAT 1 cut(s) 1471
BseDI CCNNGG 8 cut(s) 116, 440, 1535, 1748, 1772, 1812, 1894, 1914
BseGI GGATG 3 cut(s) 1075, 1536, 1789
BseLI CCNNNNNNNGG 7 cut(s) 142, 755, 1778, 1779, 1818, 1957, 2131
BseMII CTCAG 4 cut(s) 509, 530, 551, 685
BseNI ACTGG 6 cut(s) 1155, 1349, 1629, 1643, 1823, 2206
BseRI GAGGAG 4 cut(s) 403, 426, 995, 1122
BseSI GKGCMC 1 cut(s) 490
Bsh1236I CGCG 1 cut(s) 951
BshFI GGCC 3 cut(s) 446, 582, 1153
BshNI GGYRCC 2 cut(s) 566, 758
BshVI ATCGAT 1 cut(s) 1471
BsiHKAI GWGCWC 1 cut(s) 490
BsiSI CCGG 4 cut(s) 116, 1801, 1814, 1951
BslFI GGGAC 4 cut(s) 1217, 1641, 1768, 1795
BslI CCNNNNNNNGG 7 cut(s) 142, 755, 1778, 1779, 1818, 1957, 2131
BsmAI GTCTC 1 cut(s) 1964
BsmFI GGGAC 4 cut(s) 1217, 1641, 1768, 1795
BsmI GAATGC 1 cut(s) 1018
BsnI GGCC 3 cut(s) 446, 582, 1153
Bso31I GGTCTC 1 cut(s) 1964
Bsp119I TTCGAA 1 cut(s) 1607
Bsp1286I GDGCHC 1 cut(s) 490
BspACI CCGC 8 cut(s) 23, 44, 60, 218, 242, 583, 988, 1678
BspANI GGCC 3 cut(s) 446, 582, 1153
BspCNI CTCAG 4 cut(s) 508, 529, 550, 684
BspDI ATCGAT 1 cut(s) 1471
BspFNI CGCG 1 cut(s) 951
BspHI TCATGA 1 cut(s) 1453
BspMAI CTGCAG 3 cut(s) 172, 817, 1264
BspMI ACCTGC 1 cut(s) 806
BspQI GCTCTTC 2 cut(s) 592, 1986
BspT104I TTCGAA 1 cut(s) 1607
BspT107I GGYRCC 2 cut(s) 566, 758
BspTNI GGTCTC 1 cut(s) 1964
BsrBI CCGCTC 1 cut(s) 585
BsrFI RCCGGY 1 cut(s) 1950
BsrI ACTGG 6 cut(s) 1155, 1349, 1629, 1643, 1823, 2206
BssAI RCCGGY 1 cut(s) 1950
BssECI CCNNGG 8 cut(s) 116, 440, 1535, 1748, 1772, 1812, 1894, 1914
BssNAI GTATAC 1 cut(s) 209
BssNI GRCGYC 1 cut(s) 1910
BssT1I CCWWGG 3 cut(s) 1535, 1894, 1914
Bst1107I GTATAC 1 cut(s) 209
Bst2UI CCWGG 4 cut(s) 441, 923, 1774, 1975
Bst4CI ACNGT 5 cut(s) 255, 637, 1249, 1585, 1942
Bst6I CTCTTC 8 cut(s) 380, 515, 536, 592, 935, 1016, 1024, 1986
BstACI GRCGYC 1 cut(s) 1910
BstAPI GCANNNNNTGC 1 cut(s) 884
BstBI TTCGAA 1 cut(s) 1607
BstC8I GCNNGC 6 cut(s) 580, 910, 953, 957, 1598, 1930
BstDEI CTNAG 6 cut(s) 363, 495, 516, 537, 671, 1199
BstDSI CCRYGG 1 cut(s) 1748
BstENI CCTNNNNNAGG 1 cut(s) 2129
BstF5I GGATG 3 cut(s) 1075, 1536, 1789
BstFNI CGCG 1 cut(s) 951
BstH2I RGCGCY 1 cut(s) 1796
BstHHI GCGC 2 cut(s) 951, 1795
BstMAI GTCTC 1 cut(s) 1964
BstNI CCWGG 4 cut(s) 441, 923, 1774, 1975
BstSCI CCNGG 6 cut(s) 115, 439, 921, 1772, 1812, 1973
BstSFI CTRYAG 3 cut(s) 168, 813, 1260
BstSLI GKGCMC 1 cut(s) 490
BstUI CGCG 1 cut(s) 951
BstV2I GAAGAC 1 cut(s) 1884
BstX2I RGATCY 7 cut(s) 67, 220, 809, 1573, 1960, 1980, 2080
BstXI CCANNNNNNTGG 1 cut(s) 1273
BstYI RGATCY 7 cut(s) 67, 220, 809, 1573, 1960, 1980, 2080
BstZ17I GTATAC 1 cut(s) 209
Bsu15I ATCGAT 1 cut(s) 1471
BsuI GTATCC 1 cut(s) 1261
BsuRI GGCC 3 cut(s) 446, 582, 1153
BsuTUI ATCGAT 1 cut(s) 1471
BtgI CCRYGG 1 cut(s) 1748
BtrI CACGTC 1 cut(s) 1665
BtsCI GGATG 3 cut(s) 1075, 1536, 1789
BtsIMutI CAGTG 3 cut(s) 829, 1054, 1590
BveI ACCTGC 1 cut(s) 806
Cac8I GCNNGC 6 cut(s) 580, 910, 953, 957, 1598, 1930
CaiI CAGNNNCTG 1 cut(s) 596
CciI TCATGA 1 cut(s) 1453
CfoI GCGC 2 cut(s) 951, 1795
Cfr10I RCCGGY 1 cut(s) 1950
Cfr13I GGNCC 7 cut(s) 444, 863, 1152, 1628, 1745, 1809, 1891
ClaI ATCGAT 1 cut(s) 1471
CseI GACGC 1 cut(s) 1918
Csp6I GTAC 5 cut(s) 395, 525, 546, 567, 838
CviAII CATG 5 cut(s) 339, 782, 1378, 1454, 1861
CviQI GTAC 5 cut(s) 395, 525, 546, 567, 838
DdeI CTNAG 6 cut(s) 363, 495, 516, 537, 671, 1199
DriI GACNNNNNGTC 1 cut(s) 639
EaeI YGGCCR 1 cut(s) 580
Eam1104I CTCTTC 8 cut(s) 380, 515, 536, 592, 935, 1016, 1024, 1986
Eam1105I GACNNNNNGTC 1 cut(s) 639
EarI CTCTTC 8 cut(s) 380, 515, 536, 592, 935, 1016, 1024, 1986
Eco130I CCWWGG 3 cut(s) 1535, 1894, 1914
Eco31I GGTCTC 1 cut(s) 1964
Eco32I GATATC 1 cut(s) 1171
Eco47I GGWCC 5 cut(s) 863, 1628, 1745, 1809, 1891
Eco57I CTGAAG 2 cut(s) 573, 1247
EcoNI CCTNNNNNAGG 1 cut(s) 2129
EcoO109I RGGNCCY 1 cut(s) 1628
EcoRII CCWGG 4 cut(s) 439, 921, 1772, 1973
EcoRV GATATC 1 cut(s) 1171
EcoT14I CCWWGG 3 cut(s) 1535, 1894, 1914
EcoT22I ATGCAT 1 cut(s) 1549
ErhI CCWWGG 3 cut(s) 1535, 1894, 1914
FaeI CATG 5 cut(s) 342, 785, 1381, 1457, 1864
FalI AAGNNNNNCTT 2 cut(s) 1887, 1919
FaqI GGGAC 4 cut(s) 1217, 1641, 1768, 1795
FatI CATG 5 cut(s) 338, 781, 1377, 1453, 1860
FauNDI CATATG 2 cut(s) 928, 1513
FbaI TGATCA 1 cut(s) 2031
FblI GTMKAC 2 cut(s) 208, 1353
FokI GGATG 3 cut(s) 1082, 1543, 1796
FspBI CTAG 5 cut(s) 27, 266, 725, 1212, 1986
GlaI GCGC 2 cut(s) 950, 1794
GsuI CTGGAG 3 cut(s) 423, 1119, 1125
HaeII RGCGCY 1 cut(s) 1796
HaeIII GGCC 3 cut(s) 446, 582, 1153
HapII CCGG 4 cut(s) 116, 1801, 1814, 1951
HgaI GACGC 1 cut(s) 1918
HhaI GCGC 2 cut(s) 951, 1795
Hin1I GRCGYC 1 cut(s) 1910
Hin1II CATG 5 cut(s) 342, 785, 1381, 1457, 1864
Hin6I GCGC 2 cut(s) 949, 1793
HinP1I GCGC 2 cut(s) 949, 1793
HincII GTYRAC 2 cut(s) 1737, 2152
HindII GTYRAC 2 cut(s) 1737, 2152
HindIII AAGCTT 1 cut(s) 2026
HinfI GANTC 6 cut(s) 130, 493, 514, 535, 1241, 1442
HpaII CCGG 4 cut(s) 116, 1801, 1814, 1951
HphI GGTGA 7 cut(s) 49, 256, 272, 1355, 1573, 1930, 1940
Hpy188III TCNNGA 8 cut(s) 673, 1131, 1439, 1454, 1762, 1936, 2042, 2072
HpyAV CCTTC 6 cut(s) 91, 493, 556, 1059, 1771, 2031
HpyCH4III ACNGT 5 cut(s) 255, 637, 1249, 1585, 1942
HpyCH4IV ACGT 2 cut(s) 479, 1664
HpyF3I CTNAG 6 cut(s) 363, 495, 516, 537, 671, 1199
HpySE526I ACGT 2 cut(s) 479, 1664
Hsp92I GRCGYC 1 cut(s) 1910
Hsp92II CATG 5 cut(s) 342, 785, 1381, 1457, 1864
HspAI GCGC 2 cut(s) 949, 1793
KpnI GGTACC 1 cut(s) 570
Ksp22I TGATCA 1 cut(s) 2031
LguI GCTCTTC 2 cut(s) 592, 1986
LweI GCATC 4 cut(s) 645, 887, 1006, 1521
MaeI CTAG 5 cut(s) 27, 266, 725, 1212, 1986
MaeII ACGT 2 cut(s) 479, 1664
MaeIII GTNAC 4 cut(s) 452, 1072, 1906, 2233
MbiI CCGCTC 1 cut(s) 585
MflI RGATCY 7 cut(s) 67, 220, 809, 1573, 1960, 1980, 2080
MhlI GDGCHC 1 cut(s) 490
MlyI GAGTC 3 cut(s) 487, 508, 529
Mph1103I ATGCAT 1 cut(s) 1549
MroXI GAANNNNTTC 1 cut(s) 720
MseI TTAA 8 cut(s) 321, 504, 684, 971, 1635, 1710, 2109, 2127
MslI CAYNNNNRTG 2 cut(s) 1316, 1854
MspA1I CMGCKG 3 cut(s) 791, 1596, 1835
MspI CCGG 4 cut(s) 116, 1801, 1814, 1951
MspR9I CCNGG 6 cut(s) 117, 441, 923, 1774, 1814, 1975
Mva1269I GAATGC 1 cut(s) 1018
MvaI CCWGG 4 cut(s) 441, 923, 1774, 1975
MvnI CGCG 1 cut(s) 951
NciI CCSGG 2 cut(s) 117, 1814
NdeI CATATG 2 cut(s) 928, 1513
NlaIII CATG 5 cut(s) 342, 785, 1381, 1457, 1864
NmuCI GTSAC 3 cut(s) 1072, 1906, 2233
NsiI ATGCAT 1 cut(s) 1549
NspV TTCGAA 1 cut(s) 1607
PagI TCATGA 1 cut(s) 1453
PciSI GCTCTTC 2 cut(s) 592, 1986
PctI GAATGC 1 cut(s) 1018
PdmI GAANNNNTTC 1 cut(s) 720
PfeI GAWTC 3 cut(s) 130, 1241, 1442
PflFI GACNNNGTC 1 cut(s) 1841
PflMI CCANNNNNTGG 1 cut(s) 142
PleI GAGTC 3 cut(s) 487, 508, 529
PpsI GAGTC 3 cut(s) 487, 508, 529
PpuMI RGGWCCY 1 cut(s) 1628
PsiI TTATAA 1 cut(s) 2117
Psp5II RGGWCCY 1 cut(s) 1628
Psp6I CCWGG 4 cut(s) 439, 921, 1772, 1973
PspGI CCWGG 4 cut(s) 439, 921, 1772, 1973
PspPI GGNCC 7 cut(s) 444, 863, 1152, 1628, 1745, 1809, 1891
PspPPI RGGWCCY 1 cut(s) 1628
PstI CTGCAG 3 cut(s) 172, 817, 1264
PstNI CAGNNNCTG 1 cut(s) 596
PsuI RGATCY 7 cut(s) 67, 220, 809, 1573, 1960, 1980, 2080
PsyI GACNNNGTC 1 cut(s) 1841
PvuII CAGCTG 3 cut(s) 791, 1596, 1835
RsaI GTAC 5 cut(s) 396, 526, 547, 568, 839
RsaNI GTAC 5 cut(s) 395, 525, 546, 567, 838
RseI CAYNNNNRTG 2 cut(s) 1316, 1854
SapI GCTCTTC 2 cut(s) 592, 1986
SaqAI TTAA 8 cut(s) 321, 504, 684, 971, 1635, 1710, 2109, 2127
Sau96I GGNCC 7 cut(s) 444, 863, 1152, 1628, 1745, 1809, 1891
SchI GAGTC 3 cut(s) 487, 508, 529
ScrFI CCNGG 6 cut(s) 117, 441, 923, 1774, 1814, 1975
SduI GDGCHC 1 cut(s) 490
SfaNI GCATC 4 cut(s) 645, 887, 1006, 1521
SfcI CTRYAG 3 cut(s) 168, 813, 1260
SfuI TTCGAA 1 cut(s) 1607
SinI GGWCC 5 cut(s) 863, 1628, 1745, 1809, 1891
SmiMI CAYNNNNRTG 2 cut(s) 1316, 1854
SmlI CTYRAG 2 cut(s) 122, 960
SmoI CTYRAG 2 cut(s) 122, 960
SsiI CCGC 8 cut(s) 23, 44, 60, 218, 242, 583, 988, 1678
SspMI CTAG 5 cut(s) 27, 266, 725, 1212, 1986
StyD4I CCNGG 6 cut(s) 115, 439, 921, 1772, 1812, 1973
StyI CCWWGG 3 cut(s) 1535, 1894, 1914
TaaI ACNGT 5 cut(s) 255, 637, 1249, 1585, 1942
TaiI ACGT 2 cut(s) 482, 1667
TaqI TCGA 4 cut(s) 153, 1471, 1607, 2172
TaqII GACCGA 2 cut(s) 634, 1722
TatI WGTACW 1 cut(s) 394
TauI GCSGC 2 cut(s) 26, 585
TfiI GAWTC 3 cut(s) 130, 1241, 1442
Tru1I TTAA 8 cut(s) 321, 504, 684, 971, 1635, 1710, 2109, 2127
Tru9I TTAA 8 cut(s) 321, 504, 684, 971, 1635, 1710, 2109, 2127
TscAI CASTG 3 cut(s) 829, 1054, 1590
TseFI GTSAC 3 cut(s) 1072, 1906, 2233
Tsp45I GTSAC 3 cut(s) 1072, 1906, 2233
TspDTI ATGAA 7 cut(s) 591, 798, 1254, 1394, 1442, 1707, 1839
TspGWI ACGGA 4 cut(s) 289, 1077, 1394, 2252
TspRI CASTG 3 cut(s) 829, 1054, 1590
Tth111I GACNNNGTC 1 cut(s) 1841
Van91I CCANNNNNTGG 1 cut(s) 142
VneI GTGCAC 1 cut(s) 486
VpaK11BI GGWCC 5 cut(s) 863, 1628, 1745, 1809, 1891
XagI CCTNNNNNAGG 1 cut(s) 2129
XapI RAATTY 4 cut(s) 86, 1185, 1221, 1603
XmiI GTMKAC 2 cut(s) 208, 1353
XmnI GAANNNNTTC 1 cut(s) 720
XspI CTAG 5 cut(s) 27, 266, 725, 1212, 1986
Zsp2I ATGCAT 1 cut(s) 1549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.