MD16G1120800.v1.1

Domain of unknown function (DUF3444)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0001305
Physical Location & Seq
Reverse (-)
8661491 .. 8665035
3545 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1120800.v1.1.491

Sequence Viewer

Length: 2232 bp
ATGGAGTGCAACAGAGATGAGGCGGCTAGGGCAAAAGAGATTGCGGAAAGAAAGTTCACAGCAAAGGATCTTATGGGGGCAAAGAAGTTTGCCTTGAAGGCTCAAAATTTGTTTCCGGGGTTAGAGGGGATGCCCCAAATGTTGGCAACCCTCGATGTGCATATTGCGGCGGAGAACAAAATAAATGGGGAGGCTGATTGGTACGGGATACTTGGTGCGGATCCAAAAGCAGATGATGAGGCAGTGAGGAAACAATATAGGAAACTAGCTCTTATGCTTCACCCTGATAAGAACAAGTCTATAGGAGCTGATGGAGCGTTTAAGCTACTATCAGAAGCATGGAGTTTGTTGTCTGATAAATCTAAGAGAGTAGCCTATGACCAGAAGAGGAGAGTACATCAAAGGGTAGCAACTGCGAGTGGGAGTTCACAGGCTCCTCCAGGGGCCAATGGTTTCTACAATTTCACAAAAGGTACAACATCAGGCGCACAGACTCAGAAGGTTAATACACAGACTCAGAAGAGTACCACAGAGACTCAGAAGGGTACCTCACAGAATCAGAAGGGTACCTCATGGGCCAGCCGCTCTTCAGCTCCTGCTTCATCTCAAAAACCAAGAGCTAATACCTTTTGGACAGTGTGTCATAAATGCAAGATGCAGTATGAGTATCTCAGGATTTATCTTAATCATAATCTTCTTTGCCCGAATTGCCATGAACCATTTCTAGCAGTAGAAATAGCTCCACCACCTACAAATGGTGCCAAGTCAACTCCACCAAAGCATGAAACAGCTGATAGAATGGGTGTTGGATCTGCTGGTTTCAATGGTAATCAATCGTACAACCAAAACAACTTCCAATGGGGTTCATTCTCTAAAGCATCAAGTGCTTCTACGGCTGCCCAAGCCGCAAACGTGGTTAGCCAGGCATATGAGAAAGCCAAGAGAGAGCGGGAGCAGGCTCAAGCAGCATTAAAAAGAGAGGAGTTACGGAGGAAACATCAATCCTCCAAGAAGGCAAGCGGTGCTTCATCTACAGGGTACCCTAATGCTGCCAAGAGAAGAAGAGGAATGGAAGATGTCGGTGTCAGCAGCTACGGAAGGGATGTCACAAATCAAATGGGTGTGGGAGGAGCTGGAACAACCAAATTTTCTGGACCAAACGGAAGCGCCAGGCCTAGTATCACAAGGGATATCTCCCAGATTGATATTCCAAATTTACTAAGGGAGAAGGCTAGAAAAGAAATTCGGAAGAAACTAAATGAATTCACTGTGTCCAAGACTGCAGCCAAAGAGACGGTGAATGGAAACGAGAGAGAAAAATCTTTGGGAAACATTGATGTGCATAGAAATCAAAAGCAGTCTGGTGAGCCAGTGGACACAAAGAATGGCTCTTCTGACATGAAAGGTTCTGGCATTTCTGGTGTCCCTTCAGATGCAGACATATTGTCGATAAATGTTCCTGATTCTGATTTTCATGATTTTGACAAGGATCGAACAGAGAAGTGTTTTGAAGATAATCAGGTCTGGGCTGCATATGATAATGATGATGGCATGCCAAGGTTTTATGCGTTAGTTCAAAAGGTGATTTCTGTGGATCCTTTCACAGTGCGGATCAGCTGGCTGAACTCAAAAACAAATAGTGAACTGGGTCCTCTTAACTGGGTATCCTCTGGCTTCTCAAAGACGTGTGGGGAGTTCCGAGTAGGGAAATATGAAGTGAGTAATTCACTTAATTCTTTTTCTCACAGAGTTCGGTCAACAAAAGGTCCACGAGGGGCTATCTGCATATATCCCAGGAAGGGGGATGTTTGGGCGCTATACCGGAATTGGTCCCCGGACTGGAACGAACTGACAGCTGACAATGTCATTCACAAGTATGATATGGTCGAAGTTGTTGAAGACTTTAGTGAGGAGCAAGGTGTACTTGTGACTCCCTTGGTGAAAGTGGCTGGCTTCAAGACAGTATTTCACCGGCACTTGGATCCCAGAGAGGCCAGGAGGATCCCTAGAGAAGAGCTGTTTCAGTTCTCTCATCAAATCCCTTCATGCTTGATCACGGGTCAGGAAGCTGCAAATGCTCCAAAGGGTTGTCGGGAGCTGGATCCGGCAGCTACTCCGTTGGAGCTTCTTAAAGTAATAAATGACATTAAAGAGGAAGATATGATGGAGATTGACAAAAAGTGCCAGCAAGGCGATGTAGCAGAGGATGTTGAGAATAATACTGGCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3444 DnaJ

Protein Analysis

744

Amino Acids

82.19

Weight (kDa)

9.02

Isoelectric Point (pI)

31.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 66 - 127 6.3e-20 DnaJ domain
Zn_ribbon_20 PF23551 210 - 244 7.7e-21 Zinc beta-ribbon domain
DUF3444 PF11926 483 - 689 4.6e-80 Domain of unknown function (DUF3444)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 3 cut(s) 545, 566, 1038
AccB1I GGYRCC 4 cut(s) 545, 566, 758, 1038
AccB7I CCANNNNNTGG 1 cut(s) 142
AccBSI CCGCTC 2 cut(s) 585, 949
AcsI RAATTY 5 cut(s) 106, 1145, 1213, 1242, 1262
AcuI CTGAAG 2 cut(s) 573, 1413
AfaI GTAC 9 cut(s) 203, 396, 475, 526, 547, 568, 839, 1040, 1923
AfiI CCNNNNNNNGG 6 cut(s) 142, 755, 1799, 1800, 1839, 1978
AflIII ACRYGT 1 cut(s) 1685
AgsI TTSAA 6 cut(s) 97, 823, 1511, 1577, 1898, 1957
AhdI GACNNNNNGTC 2 cut(s) 639, 1444
AjiI CACGTC 1 cut(s) 1686
AjnI CCWGG 5 cut(s) 439, 921, 1169, 1793, 1994
AloI GAACNNNNNNTCC 2 cut(s) 38, 70
Alw26I GTCTC 2 cut(s) 527, 1286
AlwNI CAGNNNCTG 1 cut(s) 596
AoxI GGCC 4 cut(s) 444, 576, 1172, 1992
ApeKI GCWGC 8 cut(s) 896, 965, 1049, 1089, 1283, 1529, 2069, 2108
ApoI RAATTY 5 cut(s) 106, 1145, 1213, 1242, 1262
Asp700I GAANNNNTTC 1 cut(s) 720
Asp718I GGTACC 3 cut(s) 545, 566, 1038
AspLEI GCGC 3 cut(s) 488, 1169, 1816
AspS9I GGNCC 6 cut(s) 444, 576, 1154, 1649, 1766, 1830
AsuC2I CCSGG 2 cut(s) 117, 1835
AsuHPI GGTGA 6 cut(s) 272, 1309, 1376, 1594, 1951, 1961
AvaII GGWCC 4 cut(s) 1154, 1649, 1766, 1830
BamHI GGATCC 5 cut(s) 220, 1594, 1981, 2001, 2101
BanI GGYRCC 4 cut(s) 545, 566, 758, 1038
BauI CACGAG 1 cut(s) 1770
BbsI GAAGAC 1 cut(s) 1905
BbvI GCAGC 8 cut(s) 883, 977, 1036, 1101, 1295, 1516, 2056, 2120
BccI CCATC 3 cut(s) 305, 1541, 2158
BceAI ACGGC 1 cut(s) 909
BciT130I CCWGG 5 cut(s) 441, 923, 1171, 1795, 1996
BciVI GTATCC 2 cut(s) 201, 1675
BclI TGATCA 1 cut(s) 2052
BcnI CCSGG 2 cut(s) 117, 1835
BcoDI GTCTC 2 cut(s) 527, 1286
BfaI CTAG 6 cut(s) 27, 266, 725, 1176, 1233, 2007
BfmI CTRYAG 3 cut(s) 300, 1032, 1281
BfoI RGCGCY 2 cut(s) 1170, 1817
BfuI GTATCC 2 cut(s) 201, 1675
BglI GCCNNNNNGGC 2 cut(s) 98, 2190
Bme1390I CCNGG 7 cut(s) 117, 441, 923, 1171, 1795, 1835, 1996
Bme18I GGWCC 4 cut(s) 1154, 1649, 1766, 1830
BmeRI GACNNNNNGTC 2 cut(s) 639, 1444
BmgBI CACGTC 1 cut(s) 1686
BmgT120I GGNCC 6 cut(s) 444, 576, 1154, 1649, 1766, 1830
BmrFI CCNGG 7 cut(s) 117, 441, 923, 1171, 1795, 1835, 1996
BmrI ACTGGG 2 cut(s) 1655, 1669
BmsI GCATC 4 cut(s) 120, 645, 887, 1423
BmuI ACTGGG 2 cut(s) 1655, 1669
BpiI GAAGAC 1 cut(s) 1905
BpmI CTGGAG 1 cut(s) 423
BpuEI CTTGAG 1 cut(s) 945
BpuMI CCSGG 2 cut(s) 117, 1835
BsaJI CCNNGG 6 cut(s) 116, 440, 1556, 1793, 1833, 1935
BsaWI WCCGGW 1 cut(s) 1821
Bsc4I CCNNNNNNNGG 6 cut(s) 142, 755, 1799, 1800, 1839, 1978
Bse118I RCCGGY 1 cut(s) 1971
Bse1I ACTGG 5 cut(s) 1370, 1650, 1664, 1844, 2227
BseBI CCWGG 5 cut(s) 441, 923, 1171, 1795, 1996
BseDI CCNNGG 6 cut(s) 116, 440, 1556, 1793, 1833, 1935
BseGI GGATG 4 cut(s) 135, 1108, 1810, 2212
BseLI CCNNNNNNNGG 6 cut(s) 142, 755, 1799, 1800, 1839, 1978
BseMII CTCAG 4 cut(s) 509, 530, 551, 685
BseNI ACTGG 5 cut(s) 1370, 1650, 1664, 1844, 2227
BseRI GAGGAG 5 cut(s) 403, 426, 995, 1143, 1925
BseXI GCAGC 8 cut(s) 883, 977, 1036, 1101, 1295, 1516, 2056, 2120
BshFI GGCC 4 cut(s) 446, 578, 1174, 1994
BshNI GGYRCC 4 cut(s) 545, 566, 758, 1038
BsiSI CCGG 5 cut(s) 116, 1822, 1835, 1972, 2105
BslFI GGGAC 2 cut(s) 1409, 1816
BslI CCNNNNNNNGG 6 cut(s) 142, 755, 1799, 1800, 1839, 1978
BsmAI GTCTC 2 cut(s) 527, 1286
BsmBI CGTCTC 1 cut(s) 1286
BsmFI GGGAC 2 cut(s) 1409, 1816
BsnI GGCC 4 cut(s) 446, 578, 1174, 1994
BspANI GGCC 4 cut(s) 446, 578, 1174, 1994
BspCNI CTCAG 4 cut(s) 508, 529, 550, 684
BspHI TCATGA 1 cut(s) 1474
BspMAI CTGCAG 1 cut(s) 1285
BspQI GCTCTTC 3 cut(s) 592, 1396, 2007
BspT107I GGYRCC 4 cut(s) 545, 566, 758, 1038
BsrBI CCGCTC 2 cut(s) 585, 949
BsrFI RCCGGY 1 cut(s) 1971
BsrI ACTGG 5 cut(s) 1370, 1650, 1664, 1844, 2227
BssAI RCCGGY 1 cut(s) 1971
BssECI CCNNGG 6 cut(s) 116, 440, 1556, 1793, 1833, 1935
BssSI CACGAG 1 cut(s) 1770
BssT1I CCWWGG 2 cut(s) 1556, 1935
Bst2BI CACGAG 1 cut(s) 1770
Bst2UI CCWGG 5 cut(s) 441, 923, 1171, 1795, 1996
Bst4CI ACNGT 5 cut(s) 637, 1270, 1297, 1606, 1963
Bst6I CTCTTC 6 cut(s) 380, 515, 592, 1057, 1396, 2007
BstAPI GCANNNNNTGC 2 cut(s) 884, 1022
BstC8I GCNNGC 7 cut(s) 580, 957, 1018, 1553, 1619, 1951, 2186
BstDEI CTNAG 6 cut(s) 363, 495, 516, 537, 671, 1220
BstF5I GGATG 4 cut(s) 135, 1108, 1810, 2212
BstH2I RGCGCY 2 cut(s) 1170, 1817
BstHHI GCGC 3 cut(s) 488, 1169, 1816
BstMAI GTCTC 2 cut(s) 527, 1286
BstNI CCWGG 5 cut(s) 441, 923, 1171, 1795, 1996
BstNSI RCATGY 1 cut(s) 1555
BstSCI CCNGG 7 cut(s) 115, 439, 921, 1169, 1793, 1833, 1994
BstSFI CTRYAG 3 cut(s) 300, 1032, 1281
BstV1I GCAGC 8 cut(s) 883, 977, 1036, 1101, 1295, 1516, 2056, 2120
BstV2I GAAGAC 1 cut(s) 1905
BstX2I RGATCY 7 cut(s) 67, 220, 809, 1594, 1981, 2001, 2101
BstYI RGATCY 7 cut(s) 67, 220, 809, 1594, 1981, 2001, 2101
BsuI GTATCC 2 cut(s) 201, 1675
BsuRI GGCC 4 cut(s) 446, 578, 1174, 1994
BtgZI GCGATG 1 cut(s) 2208
BtrI CACGTC 1 cut(s) 1686
BtsCI GGATG 4 cut(s) 135, 1108, 1810, 2212
BtsI GCAGTG 1 cut(s) 249
BtsIMutI CAGTG 5 cut(s) 249, 642, 1266, 1377, 1611
Cac8I GCNNGC 7 cut(s) 580, 957, 1018, 1553, 1619, 1951, 2186
CaiI CAGNNNCTG 1 cut(s) 596
CciI TCATGA 1 cut(s) 1474
CfoI GCGC 3 cut(s) 488, 1169, 1816
Cfr10I RCCGGY 1 cut(s) 1971
Cfr13I GGNCC 6 cut(s) 444, 576, 1154, 1649, 1766, 1830
Csp6I GTAC 9 cut(s) 202, 395, 474, 525, 546, 567, 838, 1039, 1922
CviAII CATG 8 cut(s) 339, 573, 713, 782, 1399, 1475, 1552, 2046
CviQI GTAC 9 cut(s) 202, 395, 474, 525, 546, 567, 838, 1039, 1922
DdeI CTNAG 6 cut(s) 363, 495, 516, 537, 671, 1220
DriI GACNNNNNGTC 2 cut(s) 639, 1444
Eam1104I CTCTTC 6 cut(s) 380, 515, 592, 1057, 1396, 2007
Eam1105I GACNNNNNGTC 2 cut(s) 639, 1444
EarI CTCTTC 6 cut(s) 380, 515, 592, 1057, 1396, 2007
EciI GGCGGA 1 cut(s) 185
Eco130I CCWWGG 2 cut(s) 1556, 1935
Eco147I AGGCCT 1 cut(s) 1174
Eco32I GATATC 1 cut(s) 1192
Eco47I GGWCC 4 cut(s) 1154, 1649, 1766, 1830
Eco57I CTGAAG 2 cut(s) 573, 1413
EcoO109I RGGNCCY 1 cut(s) 1649
EcoRI GAATTC 1 cut(s) 1262
EcoRII CCWGG 5 cut(s) 439, 921, 1169, 1793, 1994
EcoRV GATATC 1 cut(s) 1192
EcoT14I CCWWGG 2 cut(s) 1556, 1935
ErhI CCWWGG 2 cut(s) 1556, 1935
Esp3I CGTCTC 1 cut(s) 1286
FaeI CATG 8 cut(s) 342, 576, 716, 785, 1402, 1478, 1555, 2049
FalI AAGNNNNNCTT 6 cut(s) 77, 109, 1009, 1041, 1908, 1940
FaqI GGGAC 2 cut(s) 1409, 1816
FatI CATG 8 cut(s) 338, 572, 712, 781, 1398, 1474, 1551, 2045
FauI CCCGC 1 cut(s) 942
FauNDI CATATG 2 cut(s) 928, 1534
FbaI TGATCA 1 cut(s) 2052
FokI GGATG 4 cut(s) 142, 1115, 1817, 2219
FspBI CTAG 6 cut(s) 27, 266, 725, 1176, 1233, 2007
GlaI GCGC 3 cut(s) 487, 1168, 1815
GsuI CTGGAG 1 cut(s) 423
HaeII RGCGCY 2 cut(s) 1170, 1817
HaeIII GGCC 4 cut(s) 446, 578, 1174, 1994
HapII CCGG 5 cut(s) 116, 1822, 1835, 1972, 2105
HhaI GCGC 3 cut(s) 488, 1169, 1816
Hin1II CATG 8 cut(s) 342, 576, 716, 785, 1402, 1478, 1555, 2049
Hin6I GCGC 3 cut(s) 486, 1167, 1814
HinP1I GCGC 3 cut(s) 486, 1167, 1814
HincII GTYRAC 2 cut(s) 768, 1758
HindII GTYRAC 2 cut(s) 768, 1758
HinfI GANTC 6 cut(s) 493, 514, 535, 556, 1463, 1930
HpaII CCGG 5 cut(s) 116, 1822, 1835, 1972, 2105
HphI GGTGA 6 cut(s) 272, 1309, 1376, 1594, 1951, 1961
Hpy166II GTNNAC 8 cut(s) 57, 428, 768, 1375, 1643, 1758, 1769, 1922
Hpy188III TCNNGA 7 cut(s) 673, 1152, 1460, 1475, 1957, 2063, 2093
Hpy8I GTNNAC 8 cut(s) 57, 428, 768, 1375, 1643, 1758, 1769, 1922
HpyCH4III ACNGT 5 cut(s) 637, 1270, 1297, 1606, 1963
HpyCH4IV ACGT 2 cut(s) 912, 1685
HpyF3I CTNAG 6 cut(s) 363, 495, 516, 537, 671, 1220
HpySE526I ACGT 2 cut(s) 912, 1685
Hsp92II CATG 8 cut(s) 342, 576, 716, 785, 1402, 1478, 1555, 2049
HspAI GCGC 3 cut(s) 486, 1167, 1814
KpnI GGTACC 3 cut(s) 549, 570, 1042
Ksp22I TGATCA 1 cut(s) 2052
LguI GCTCTTC 3 cut(s) 592, 1396, 2007
Lsp1109I GCAGC 8 cut(s) 883, 977, 1036, 1101, 1295, 1516, 2056, 2120
LweI GCATC 4 cut(s) 120, 645, 887, 1423
MaeI CTAG 6 cut(s) 27, 266, 725, 1176, 1233, 2007
MaeII ACGT 2 cut(s) 912, 1685
MaeIII GTNAC 3 cut(s) 984, 1105, 1927
MbiI CCGCTC 2 cut(s) 585, 949
MflI RGATCY 7 cut(s) 67, 220, 809, 1594, 1981, 2001, 2101
MlyI GAGTC 4 cut(s) 487, 508, 529, 1924
MmeI TCCRAC 2 cut(s) 787, 2100
MroXI GAANNNNTTC 1 cut(s) 720
MseI TTAA 8 cut(s) 321, 504, 684, 971, 1656, 1731, 2130, 2148
MslI CAYNNNNRTG 2 cut(s) 1337, 1875
MspA1I CMGCKG 3 cut(s) 791, 1617, 1856
MspI CCGG 5 cut(s) 116, 1822, 1835, 1972, 2105
MspR9I CCNGG 7 cut(s) 117, 441, 923, 1171, 1795, 1835, 1996
MvaI CCWGG 5 cut(s) 441, 923, 1171, 1795, 1996
NciI CCSGG 2 cut(s) 117, 1835
NdeI CATATG 2 cut(s) 928, 1534
NlaIII CATG 8 cut(s) 342, 576, 716, 785, 1402, 1478, 1555, 2049
NmuCI GTSAC 2 cut(s) 1105, 1927
NspI RCATGY 1 cut(s) 1555
PaeI GCATGC 1 cut(s) 1555
PagI TCATGA 1 cut(s) 1474
PceI AGGCCT 1 cut(s) 1174
PciSI GCTCTTC 3 cut(s) 592, 1396, 2007
PdmI GAANNNNTTC 1 cut(s) 720
PfeI GAWTC 2 cut(s) 556, 1463
PflFI GACNNNGTC 1 cut(s) 1862
PflMI CCANNNNNTGG 1 cut(s) 142
PleI GAGTC 4 cut(s) 487, 508, 529, 1924
PpsI GAGTC 4 cut(s) 487, 508, 529, 1924
PpuMI RGGWCCY 1 cut(s) 1649
Psp5II RGGWCCY 1 cut(s) 1649
Psp6I CCWGG 5 cut(s) 439, 921, 1169, 1793, 1994
PspGI CCWGG 5 cut(s) 439, 921, 1169, 1793, 1994
PspPI GGNCC 6 cut(s) 444, 576, 1154, 1649, 1766, 1830
PspPPI RGGWCCY 1 cut(s) 1649
PstI CTGCAG 1 cut(s) 1285
PstNI CAGNNNCTG 1 cut(s) 596
PsuI RGATCY 7 cut(s) 67, 220, 809, 1594, 1981, 2001, 2101
PsyI GACNNNGTC 1 cut(s) 1862
PvuII CAGCTG 3 cut(s) 791, 1617, 1856
RsaI GTAC 9 cut(s) 203, 396, 475, 526, 547, 568, 839, 1040, 1923
RsaNI GTAC 9 cut(s) 202, 395, 474, 525, 546, 567, 838, 1039, 1922
RseI CAYNNNNRTG 2 cut(s) 1337, 1875
SapI GCTCTTC 3 cut(s) 592, 1396, 2007
SaqAI TTAA 8 cut(s) 321, 504, 684, 971, 1656, 1731, 2130, 2148
Sau96I GGNCC 6 cut(s) 444, 576, 1154, 1649, 1766, 1830
SchI GAGTC 4 cut(s) 487, 508, 529, 1924
ScrFI CCNGG 7 cut(s) 117, 441, 923, 1171, 1795, 1835, 1996
SfaNI GCATC 4 cut(s) 120, 645, 887, 1423
SfcI CTRYAG 3 cut(s) 300, 1032, 1281
SinI GGWCC 4 cut(s) 1154, 1649, 1766, 1830
SmiMI CAYNNNNRTG 2 cut(s) 1337, 1875
SmlI CTYRAG 1 cut(s) 960
SmoI CTYRAG 1 cut(s) 960
SphI GCATGC 1 cut(s) 1555
SseBI AGGCCT 1 cut(s) 1174
SspMI CTAG 6 cut(s) 27, 266, 725, 1176, 1233, 2007
StuI AGGCCT 1 cut(s) 1174
StyD4I CCNGG 7 cut(s) 115, 439, 921, 1169, 1793, 1833, 1994
StyI CCWWGG 2 cut(s) 1556, 1935
TaaI ACNGT 5 cut(s) 637, 1270, 1297, 1606, 1963
TaiI ACGT 2 cut(s) 915, 1688
TaqI TCGA 4 cut(s) 153, 1448, 1492, 1887
TaqII GACCGA 1 cut(s) 1743
TatI WGTACW 2 cut(s) 394, 1921
TauI GCSGC 4 cut(s) 26, 170, 585, 908
TfiI GAWTC 2 cut(s) 556, 1463
Tru1I TTAA 8 cut(s) 321, 504, 684, 971, 1656, 1731, 2130, 2148
Tru9I TTAA 8 cut(s) 321, 504, 684, 971, 1656, 1731, 2130, 2148
TscAI CASTG 5 cut(s) 249, 642, 1273, 1377, 1611
TseFI GTSAC 2 cut(s) 1105, 1927
TseI GCWGC 8 cut(s) 896, 965, 1049, 1089, 1283, 1529, 2069, 2108
Tsp45I GTSAC 2 cut(s) 1105, 1927
TspGWI ACGGA 4 cut(s) 1003, 1110, 1176, 2106
TspRI CASTG 5 cut(s) 249, 642, 1273, 1377, 1611
Tth111I GACNNNGTC 1 cut(s) 1862
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 4 cut(s) 1154, 1649, 1766, 1830
XapI RAATTY 5 cut(s) 106, 1145, 1213, 1242, 1262
XceI RCATGY 1 cut(s) 1555
XmnI GAANNNNTTC 1 cut(s) 720
XspI CTAG 6 cut(s) 27, 266, 725, 1176, 1233, 2007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.