Domain of unknown function (DUF3444)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1144, 1971 |
| AatII | GACGTC | 1 cut(s) | 1472 |
| Acc36I | ACCTGC | 2 cut(s) | 1144, 1971 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 103, 1866 |
| AciI | CCGC | 8 cut(s) | 5, 107, 464, 590, 1073, 1554, 1633, 1783 |
| AcsI | RAATTY | 4 cut(s) | 583, 604, 1596, 2031 |
| AcuI | CTGAAG | 2 cut(s) | 412, 1086 |
| AcyI | GRCGYC | 2 cut(s) | 1469, 1999 |
| AfaI | GTAC | 3 cut(s) | 385, 1119, 1396 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 103, 742, 1826, 1866 |
| AflIII | ACRYGT | 5 cut(s) | 117, 1134, 1353, 1397, 1709 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 522 |
| AhlI | ACTAGT | 1 cut(s) | 1421 |
| AjiI | CACGTC | 1 cut(s) | 118 |
| AjnI | CCWGG | 2 cut(s) | 76, 262 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 31 |
| AluBI | AGCT | 9 cut(s) | 155, 230, 269, 725, 978, 1372, 1434, 2018, 2099 |
| AluI | AGCT | 9 cut(s) | 155, 230, 269, 725, 978, 1372, 1434, 2018, 2099 |
| Alw26I | GTCTC | 2 cut(s) | 194, 2064 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 269, 668 |
| Ama87I | CYCGRG | 1 cut(s) | 700 |
| AoxI | GGCC | 4 cut(s) | 390, 792, 1551, 1673 |
| ApeKI | GCWGC | 7 cut(s) | 332, 434, 485, 662, 725, 830, 2138 |
| ApoI | RAATTY | 4 cut(s) | 583, 604, 1596, 2031 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 37, 69 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 14, 363, 376, 1099, 1318 |
| AspA2I | CCTAGG | 1 cut(s) | 1820 |
| AspS9I | GGNCC | 6 cut(s) | 391, 516, 926, 1551, 1673, 1857 |
| AsuHPI | GGTGA | 5 cut(s) | 233, 565, 1841, 1952, 2102 |
| AvaI | CYCGRG | 1 cut(s) | 700 |
| AvaII | GGWCC | 3 cut(s) | 516, 926, 1857 |
| AvrII | CCTAGG | 1 cut(s) | 1820 |
| BamHI | GGATCC | 2 cut(s) | 181, 2008 |
| BanII | GRGCYC | 1 cut(s) | 1843 |
| BbsI | GAAGAC | 3 cut(s) | 1092, 1235, 1683 |
| BbvI | GCAGC | 7 cut(s) | 344, 421, 472, 674, 712, 817, 2150 |
| BccI | CCATC | 2 cut(s) | 266, 586 |
| BceAI | ACGGC | 1 cut(s) | 768 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1328, 1362 |
| BciT130I | CCWGG | 2 cut(s) | 78, 264 |
| BciVI | GTATCC | 2 cut(s) | 1153, 1372 |
| BclI | TGATCA | 1 cut(s) | 1126 |
| BcoDI | GTCTC | 2 cut(s) | 194, 2064 |
| BcuI | ACTAGT | 1 cut(s) | 1421 |
| BfmI | CTRYAG | 5 cut(s) | 129, 810, 1062, 1278, 1846 |
| BfuAI | ACCTGC | 2 cut(s) | 1144, 1971 |
| BfuI | GTATCC | 2 cut(s) | 1153, 1372 |
| BisI | GCNGC | 9 cut(s) | 333, 435, 465, 486, 663, 726, 831, 1554, 2139 |
| BlnI | CCTAGG | 1 cut(s) | 1820 |
| BlsI | GCNGC | 9 cut(s) | 334, 436, 466, 487, 664, 727, 832, 1555, 2140 |
| Bme1390I | CCNGG | 2 cut(s) | 78, 264 |
| Bme18I | GGWCC | 3 cut(s) | 516, 926, 1857 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 522 |
| BmeT110I | CYCGRG | 1 cut(s) | 700 |
| BmgBI | CACGTC | 1 cut(s) | 118 |
| BmgT120I | GGNCC | 6 cut(s) | 391, 516, 926, 1551, 1673, 1857 |
| BmiI | GGNNCC | 4 cut(s) | 183, 946, 1674, 2010 |
| BmrFI | CCNGG | 2 cut(s) | 78, 264 |
| BmrI | ACTGGG | 2 cut(s) | 1679, 1693 |
| BmsI | GCATC | 2 cut(s) | 833, 1566 |
| BmuI | ACTGGG | 2 cut(s) | 1679, 1693 |
| BpiI | GAAGAC | 3 cut(s) | 1092, 1235, 1683 |
| BpmI | CTGGAG | 1 cut(s) | 246 |
| BpuEI | CTTGAG | 1 cut(s) | 2180 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1512, 2130 |
| BsaHI | GRCGYC | 2 cut(s) | 1469, 1999 |
| BsaJI | CCNNGG | 2 cut(s) | 1580, 1820 |
| BsaWI | WCCGGW | 1 cut(s) | 1882 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 29, 529, 559 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 103, 742, 1826, 1866 |
| Bse1I | ACTGG | 4 cut(s) | 795, 1674, 1688, 1871 |
| Bse3DI | GCAATG | 1 cut(s) | 1470 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1512, 2130 |
| BseBI | CCWGG | 2 cut(s) | 78, 264 |
| BseDI | CCNNGG | 2 cut(s) | 1580, 1820 |
| BseGI | GGATG | 3 cut(s) | 491, 856, 1581 |
| BseJI | GATNNNNATC | 2 cut(s) | 1512, 2130 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 103, 742, 1826, 1866 |
| BseMI | GCAATG | 1 cut(s) | 1470 |
| BseMII | CTCAG | 1 cut(s) | 1449 |
| BseNI | ACTGG | 4 cut(s) | 795, 1674, 1688, 1871 |
| BseXI | GCAGC | 7 cut(s) | 344, 421, 472, 674, 712, 817, 2150 |
| BsgI | GTGCAG | 3 cut(s) | 681, 1467, 2058 |
| BshFI | GGCC | 4 cut(s) | 392, 794, 1553, 1675 |
| BsiHKCI | CYCGRG | 1 cut(s) | 700 |
| BsiSI | CCGG | 4 cut(s) | 482, 1359, 1883, 2147 |
| BslFI | GGGAC | 3 cut(s) | 1047, 1816, 2054 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 103, 742, 1826, 1866 |
| BsmAI | GTCTC | 2 cut(s) | 194, 2064 |
| BsmFI | GGGAC | 3 cut(s) | 1047, 1816, 2054 |
| BsmI | GAATGC | 5 cut(s) | 168, 278, 777, 1748, 1876 |
| BsnI | GGCC | 4 cut(s) | 392, 794, 1553, 1675 |
| BsoBI | CYCGRG | 1 cut(s) | 700 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1843 |
| Bsp1407I | TGTACA | 1 cut(s) | 1117 |
| BspACI | CCGC | 8 cut(s) | 5, 107, 464, 590, 1073, 1554, 1633, 1783 |
| BspANI | GGCC | 4 cut(s) | 392, 794, 1553, 1675 |
| BspCNI | CTCAG | 1 cut(s) | 1448 |
| BspHI | TCATGA | 2 cut(s) | 613, 2022 |
| BspLI | GGNNCC | 4 cut(s) | 183, 946, 1674, 2010 |
| BspMAI | CTGCAG | 3 cut(s) | 133, 1066, 1282 |
| BspMI | ACCTGC | 2 cut(s) | 1144, 1971 |
| BspQI | GCTCTTC | 1 cut(s) | 237 |
| BsrDI | GCAATG | 1 cut(s) | 1470 |
| BsrGI | TGTACA | 1 cut(s) | 1117 |
| BsrI | ACTGG | 4 cut(s) | 795, 1674, 1688, 1871 |
| BssECI | CCNNGG | 2 cut(s) | 1580, 1820 |
| BssNI | GRCGYC | 2 cut(s) | 1469, 1999 |
| BssT1I | CCWWGG | 1 cut(s) | 1820 |
| Bst2UI | CCWGG | 2 cut(s) | 78, 264 |
| Bst4CI | ACNGT | 8 cut(s) | 257, 388, 443, 1122, 1413, 1807, 1954, 1990 |
| Bst6I | CTCTTC | 3 cut(s) | 237, 1007, 2037 |
| BstACI | GRCGYC | 2 cut(s) | 1469, 1999 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 668 |
| BstAUI | TGTACA | 1 cut(s) | 1117 |
| BstC8I | GCNNGC | 4 cut(s) | 105, 1151, 1370, 1733 |
| BstDEI | CTNAG | 1 cut(s) | 1435 |
| BstF5I | GGATG | 3 cut(s) | 491, 856, 1581 |
| BstMAI | GTCTC | 2 cut(s) | 194, 2064 |
| BstNI | CCWGG | 2 cut(s) | 78, 264 |
| BstNSI | RCATGY | 6 cut(s) | 989, 1138, 1205, 1357, 1401, 1713 |
| BstSCI | CCNGG | 2 cut(s) | 76, 262 |
| BstSFI | CTRYAG | 5 cut(s) | 129, 810, 1062, 1278, 1846 |
| BstV1I | GCAGC | 7 cut(s) | 344, 421, 472, 674, 712, 817, 2150 |
| BstV2I | GAAGAC | 3 cut(s) | 1092, 1235, 1683 |
| BstX2I | RGATCY | 4 cut(s) | 181, 1618, 2008, 2125 |
| BstYI | RGATCY | 4 cut(s) | 181, 1618, 2008, 2125 |
| BsuI | GTATCC | 2 cut(s) | 1153, 1372 |
| BsuRI | GGCC | 4 cut(s) | 392, 794, 1553, 1675 |
| BtrI | CACGTC | 1 cut(s) | 118 |
| BtsCI | GGATG | 3 cut(s) | 491, 856, 1581 |
| BtsI | GCAGTG | 3 cut(s) | 602, 915, 1346 |
| BtsIMutI | CAGTG | 9 cut(s) | 393, 436, 602, 802, 915, 1127, 1346, 1812, 1995 |
| BveI | ACCTGC | 2 cut(s) | 1144, 1971 |
| Cac8I | GCNNGC | 4 cut(s) | 105, 1151, 1370, 1733 |
| CaiI | CAGNNNCTG | 2 cut(s) | 269, 668 |
| CciI | TCATGA | 2 cut(s) | 613, 2022 |
| Cfr13I | GGNCC | 6 cut(s) | 391, 516, 926, 1551, 1673, 1857 |
| CseI | GACGC | 2 cut(s) | 549, 1988 |
| Csp6I | GTAC | 3 cut(s) | 384, 1118, 1395 |
| CviQI | GTAC | 3 cut(s) | 384, 1118, 1395 |
| DdeI | CTNAG | 1 cut(s) | 1435 |
| DraI | TTTAAA | 1 cut(s) | 1534 |
| DriI | GACNNNNNGTC | 1 cut(s) | 522 |
| Eam1104I | CTCTTC | 3 cut(s) | 237, 1007, 2037 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 522 |
| EarI | CTCTTC | 3 cut(s) | 237, 1007, 2037 |
| EciI | GGCGGA | 3 cut(s) | 20, 1088, 1798 |
| Eco130I | CCWWGG | 1 cut(s) | 1820 |
| Eco24I | GRGCYC | 1 cut(s) | 1843 |
| Eco32I | GATATC | 1 cut(s) | 1192 |
| Eco47I | GGWCC | 3 cut(s) | 516, 926, 1857 |
| Eco57I | CTGAAG | 2 cut(s) | 412, 1086 |
| Eco88I | CYCGRG | 1 cut(s) | 700 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1673 |
| EcoRI | GAATTC | 2 cut(s) | 604, 2031 |
| EcoRII | CCWGG | 2 cut(s) | 76, 262 |
| EcoRV | GATATC | 1 cut(s) | 1192 |
| EcoT14I | CCWWGG | 1 cut(s) | 1820 |
| EcoT22I | ATGCAT | 2 cut(s) | 848, 1876 |
| EcoT38I | GRGCYC | 1 cut(s) | 1843 |
| ErhI | CCWWGG | 1 cut(s) | 1820 |
| FaqI | GGGAC | 3 cut(s) | 1047, 1816, 2054 |
| FauNDI | CATATG | 2 cut(s) | 337, 894 |
| FbaI | TGATCA | 1 cut(s) | 1126 |
| Fnu4HI | GCNGC | 9 cut(s) | 333, 435, 465, 486, 663, 726, 831, 1554, 2139 |
| FokI | GGATG | 3 cut(s) | 478, 863, 1588 |
| FriOI | GRGCYC | 1 cut(s) | 1843 |
| Fsp4HI | GCNGC | 9 cut(s) | 333, 435, 465, 486, 663, 726, 831, 1554, 2139 |
| GluI | GCNGC | 9 cut(s) | 333, 435, 465, 486, 663, 726, 831, 1554, 2139 |
| GsuI | CTGGAG | 1 cut(s) | 246 |
| HaeIII | GGCC | 4 cut(s) | 392, 794, 1553, 1675 |
| HapII | CCGG | 4 cut(s) | 482, 1359, 1883, 2147 |
| HgaI | GACGC | 2 cut(s) | 549, 1988 |
| Hin1I | GRCGYC | 2 cut(s) | 1469, 1999 |
| HinfI | GANTC | 3 cut(s) | 478, 1439, 1649 |
| HpaII | CCGG | 4 cut(s) | 482, 1359, 1883, 2147 |
| HphI | GGTGA | 5 cut(s) | 233, 565, 1841, 1952, 2102 |
| Hpy166II | GTNNAC | 4 cut(s) | 573, 963, 1250, 1285 |
| Hpy188I | TCNGA | 9 cut(s) | 186, 316, 447, 565, 750, 1114, 1333, 1438, 1724 |
| Hpy8I | GTNNAC | 4 cut(s) | 573, 963, 1250, 1285 |
| HpyAV | CCTTC | 5 cut(s) | 52, 645, 793, 1015, 1819 |
| HpyCH4III | ACNGT | 8 cut(s) | 257, 388, 443, 1122, 1413, 1807, 1954, 1990 |
| HpyCH4IV | ACGT | 5 cut(s) | 47, 117, 539, 695, 1469 |
| HpyF3I | CTNAG | 1 cut(s) | 1435 |
| HpySE526I | ACGT | 5 cut(s) | 47, 117, 539, 695, 1469 |
| Hsp92I | GRCGYC | 2 cut(s) | 1469, 1999 |
| Ksp22I | TGATCA | 1 cut(s) | 1126 |
| LguI | GCTCTTC | 1 cut(s) | 237 |
| LmnI | GCTCC | 7 cut(s) | 266, 275, 550, 592, 905, 944, 2113 |
| Lsp1109I | GCAGC | 7 cut(s) | 344, 421, 472, 674, 712, 817, 2150 |
| LweI | GCATC | 2 cut(s) | 833, 1566 |
| MaeII | ACGT | 5 cut(s) | 47, 117, 539, 695, 1469 |
| MaeIII | GTNAC | 3 cut(s) | 1400, 1948, 1954 |
| MfeI | CAATTG | 1 cut(s) | 1473 |
| MflI | RGATCY | 4 cut(s) | 181, 1618, 2008, 2125 |
| MhlI | GDGCHC | 1 cut(s) | 1843 |
| MlyI | GAGTC | 1 cut(s) | 472 |
| MmeI | TCCRAC | 2 cut(s) | 209, 838 |
| Mph1103I | ATGCAT | 2 cut(s) | 848, 1876 |
| MroXI | GAANNNNTTC | 5 cut(s) | 14, 363, 376, 1099, 1318 |
| MseI | TTAA | 3 cut(s) | 675, 1533, 1569 |
| MslI | CAYNNNNRTG | 2 cut(s) | 372, 1902 |
| MspA1I | CMGCKG | 3 cut(s) | 590, 725, 2018 |
| MspI | CCGG | 4 cut(s) | 482, 1359, 1883, 2147 |
| MspR9I | CCNGG | 2 cut(s) | 78, 264 |
| MunI | CAATTG | 1 cut(s) | 1473 |
| Mva1269I | GAATGC | 5 cut(s) | 168, 278, 777, 1748, 1876 |
| MvaI | CCWGG | 2 cut(s) | 78, 264 |
| NdeI | CATATG | 2 cut(s) | 337, 894 |
| NlaIV | GGNNCC | 4 cut(s) | 183, 946, 1674, 2010 |
| NmuCI | GTSAC | 1 cut(s) | 1400 |
| NsiI | ATGCAT | 2 cut(s) | 848, 1876 |
| NspI | RCATGY | 6 cut(s) | 989, 1138, 1205, 1357, 1401, 1713 |
| PaeR7I | CTCGAG | 1 cut(s) | 700 |
| PagI | TCATGA | 2 cut(s) | 613, 2022 |
| PaqCI | CACCTGC | 2 cut(s) | 1144, 1971 |
| PciI | ACATGT | 4 cut(s) | 1134, 1353, 1397, 1709 |
| PciSI | GCTCTTC | 1 cut(s) | 237 |
| PctI | GAATGC | 5 cut(s) | 168, 278, 777, 1748, 1876 |
| PdmI | GAANNNNTTC | 5 cut(s) | 14, 363, 376, 1099, 1318 |
| PfeI | GAWTC | 2 cut(s) | 1439, 1649 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 103, 1866 |
| PfoI | TCCNGGA | 1 cut(s) | 262 |
| PkrI | GCNGC | 9 cut(s) | 334, 436, 466, 487, 664, 727, 832, 1555, 2140 |
| PleI | GAGTC | 1 cut(s) | 472 |
| PpsI | GAGTC | 1 cut(s) | 472 |
| PscI | ACATGT | 4 cut(s) | 1134, 1353, 1397, 1709 |
| Psp6I | CCWGG | 2 cut(s) | 76, 262 |
| PspGI | CCWGG | 2 cut(s) | 76, 262 |
| PspN4I | GGNNCC | 4 cut(s) | 183, 946, 1674, 2010 |
| PspPI | GGNCC | 6 cut(s) | 391, 516, 926, 1551, 1673, 1857 |
| PstI | CTGCAG | 3 cut(s) | 133, 1066, 1282 |
| PstNI | CAGNNNCTG | 2 cut(s) | 269, 668 |
| PsuI | RGATCY | 4 cut(s) | 181, 1618, 2008, 2125 |
| PvuII | CAGCTG | 2 cut(s) | 725, 2018 |
| RsaI | GTAC | 3 cut(s) | 385, 1119, 1396 |
| RsaNI | GTAC | 3 cut(s) | 384, 1118, 1395 |
| RseI | CAYNNNNRTG | 2 cut(s) | 372, 1902 |
| SapI | GCTCTTC | 1 cut(s) | 237 |
| SaqAI | TTAA | 3 cut(s) | 675, 1533, 1569 |
| SatI | GCNGC | 9 cut(s) | 333, 435, 465, 486, 663, 726, 831, 1554, 2139 |
| Sau96I | GGNCC | 6 cut(s) | 391, 516, 926, 1551, 1673, 1857 |
| SchI | GAGTC | 1 cut(s) | 472 |
| ScrFI | CCNGG | 2 cut(s) | 78, 264 |
| SduI | GDGCHC | 1 cut(s) | 1843 |
| SfaNI | GCATC | 2 cut(s) | 833, 1566 |
| SfcI | CTRYAG | 5 cut(s) | 129, 810, 1062, 1278, 1846 |
| Sfr274I | CTCGAG | 1 cut(s) | 700 |
| SinI | GGWCC | 3 cut(s) | 516, 926, 1857 |
| SlaI | CTCGAG | 1 cut(s) | 700 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 372, 1902 |
| SmlI | CTYRAG | 2 cut(s) | 700, 2159 |
| SmoI | CTYRAG | 2 cut(s) | 700, 2159 |
| SpeI | ACTAGT | 1 cut(s) | 1421 |
| SsiI | CCGC | 8 cut(s) | 5, 107, 464, 590, 1073, 1554, 1633, 1783 |
| StyD4I | CCNGG | 2 cut(s) | 76, 262 |
| StyI | CCWWGG | 1 cut(s) | 1820 |
| TaaI | ACNGT | 8 cut(s) | 257, 388, 443, 1122, 1413, 1807, 1954, 1990 |
| TaiI | ACGT | 5 cut(s) | 50, 120, 542, 698, 1472 |
| TaqI | TCGA | 5 cut(s) | 380, 476, 701, 950, 1516 |
| TatI | WGTACW | 2 cut(s) | 383, 1117 |
| TauI | GCSGC | 2 cut(s) | 467, 1556 |
| TfiI | GAWTC | 2 cut(s) | 1439, 1649 |
| Tru1I | TTAA | 3 cut(s) | 675, 1533, 1569 |
| Tru9I | TTAA | 3 cut(s) | 675, 1533, 1569 |
| TscAI | CASTG | 9 cut(s) | 393, 436, 602, 802, 915, 1127, 1346, 1812, 1995 |
| TseFI | GTSAC | 1 cut(s) | 1400 |
| TseI | GCWGC | 7 cut(s) | 332, 434, 485, 662, 725, 830, 2138 |
| Tsp45I | GTSAC | 1 cut(s) | 1400 |
| TspDTI | ATGAA | 7 cut(s) | 271, 372, 480, 630, 1589, 1752, 1920 |
| TspRI | CASTG | 9 cut(s) | 393, 436, 602, 802, 915, 1127, 1346, 1812, 1995 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 103, 1866 |
| VpaK11BI | GGWCC | 3 cut(s) | 516, 926, 1857 |
| XapI | RAATTY | 4 cut(s) | 583, 604, 1596, 2031 |
| XceI | RCATGY | 6 cut(s) | 989, 1138, 1205, 1357, 1401, 1713 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1666, 2118 |
| XhoI | CTCGAG | 1 cut(s) | 700 |
| XmaJI | CCTAGG | 1 cut(s) | 1820 |
| XmnI | GAANNNNTTC | 5 cut(s) | 14, 363, 376, 1099, 1318 |
| ZraI | GACGTC | 1 cut(s) | 1470 |
| Zsp2I | ATGCAT | 2 cut(s) | 848, 1876 |