Domain of unknown function (DUF3444)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1261, 2088 |
| AatII | GACGTC | 1 cut(s) | 1589 |
| Acc36I | ACCTGC | 2 cut(s) | 1261, 2088 |
| AccB1I | GGYRCC | 1 cut(s) | 630 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 142, 1983 |
| AciI | CCGC | 5 cut(s) | 44, 503, 1190, 1671, 1750 |
| AcsI | RAATTY | 4 cut(s) | 700, 721, 1713, 2148 |
| AcuI | CTGAAG | 2 cut(s) | 285, 451 |
| AcyI | GRCGYC | 2 cut(s) | 1586, 2116 |
| AfaI | GTAC | 4 cut(s) | 424, 640, 1236, 1513 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 142, 859, 1943, 1983, 2270 |
| AflIII | ACRYGT | 4 cut(s) | 156, 1470, 1514, 1826 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 561 |
| AhlI | ACTAGT | 1 cut(s) | 1538 |
| AjiI | CACGTC | 1 cut(s) | 157 |
| AjnI | CCWGG | 2 cut(s) | 115, 432 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 38, 70 |
| Alw21I | GWGCWC | 1 cut(s) | 1915 |
| Alw26I | GTCTC | 3 cut(s) | 233, 2181, 2272 |
| Alw44I | GTGCAC | 1 cut(s) | 1911 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 308, 785 |
| Ama87I | CYCGRG | 1 cut(s) | 817 |
| AoxI | GGCC | 5 cut(s) | 21, 429, 909, 1668, 1790 |
| ApaLI | GTGCAC | 1 cut(s) | 1911 |
| ApeKI | GCWGC | 7 cut(s) | 371, 473, 524, 779, 842, 947, 2255 |
| ApoI | RAATTY | 4 cut(s) | 700, 721, 1713, 2148 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 76, 108 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 53, 402, 415, 1216, 1435 |
| AspA2I | CCTAGG | 1 cut(s) | 1937 |
| AspS9I | GGNCC | 6 cut(s) | 430, 555, 1043, 1668, 1790, 1974 |
| AsuC2I | CCSGG | 1 cut(s) | 1222 |
| AsuHPI | GGTGA | 6 cut(s) | 272, 589, 682, 1958, 2069, 2219 |
| AvaI | CYCGRG | 1 cut(s) | 817 |
| AvaII | GGWCC | 3 cut(s) | 555, 1043, 1974 |
| AvrII | CCTAGG | 1 cut(s) | 1937 |
| BaeGI | GKGCMC | 2 cut(s) | 1227, 1915 |
| BamHI | GGATCC | 2 cut(s) | 220, 2125 |
| BanI | GGYRCC | 1 cut(s) | 630 |
| BanII | GRGCYC | 1 cut(s) | 1960 |
| BbsI | GAAGAC | 4 cut(s) | 1136, 1209, 1352, 1800 |
| Bbv12I | GWGCWC | 1 cut(s) | 1915 |
| BbvI | GCAGC | 7 cut(s) | 383, 460, 511, 791, 829, 934, 2267 |
| BccI | CCATC | 4 cut(s) | 34, 305, 633, 703 |
| BceAI | ACGGC | 2 cut(s) | 8, 885 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1445, 1479 |
| BciT130I | CCWGG | 2 cut(s) | 117, 434 |
| BciVI | GTATCC | 2 cut(s) | 1270, 1489 |
| BclI | TGATCA | 2 cut(s) | 379, 1243 |
| BcnI | CCSGG | 1 cut(s) | 1222 |
| BcoDI | GTCTC | 3 cut(s) | 233, 2181, 2272 |
| BcuI | ACTAGT | 1 cut(s) | 1538 |
| BfaI | CTAG | 9 cut(s) | 152, 266, 507, 885, 1164, 1350, 1380, 1539, 1938 |
| BfmI | CTRYAG | 4 cut(s) | 168, 927, 1395, 1963 |
| BfuAI | ACCTGC | 2 cut(s) | 1261, 2088 |
| BfuI | GTATCC | 2 cut(s) | 1270, 1489 |
| BisI | GCNGC | 9 cut(s) | 372, 474, 504, 525, 780, 843, 948, 1671, 2256 |
| BlnI | CCTAGG | 1 cut(s) | 1937 |
| BlsI | GCNGC | 9 cut(s) | 373, 475, 505, 526, 781, 844, 949, 1672, 2257 |
| Bme1390I | CCNGG | 3 cut(s) | 117, 434, 1222 |
| Bme18I | GGWCC | 3 cut(s) | 555, 1043, 1974 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 561 |
| BmeT110I | CYCGRG | 1 cut(s) | 817 |
| BmgBI | CACGTC | 1 cut(s) | 157 |
| BmgT120I | GGNCC | 6 cut(s) | 430, 555, 1043, 1668, 1790, 1974 |
| BmiI | GGNNCC | 5 cut(s) | 222, 632, 1063, 1791, 2127 |
| BmrFI | CCNGG | 3 cut(s) | 117, 434, 1222 |
| BmrI | ACTGGG | 2 cut(s) | 1796, 1810 |
| BmsI | GCATC | 3 cut(s) | 138, 950, 1683 |
| BmuI | ACTGGG | 2 cut(s) | 1796, 1810 |
| BpiI | GAAGAC | 4 cut(s) | 1136, 1209, 1352, 1800 |
| BpuMI | CCSGG | 1 cut(s) | 1222 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1629, 2247 |
| BsaHI | GRCGYC | 2 cut(s) | 1586, 2116 |
| BsaI | GGTCTC | 1 cut(s) | 2272 |
| BsaJI | CCNNGG | 3 cut(s) | 432, 1697, 1937 |
| BsaWI | WCCGGW | 2 cut(s) | 1999, 2263 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 38, 68 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 142, 859, 1943, 1983, 2270 |
| Bse1I | ACTGG | 4 cut(s) | 912, 1791, 1805, 1988 |
| Bse3DI | GCAATG | 3 cut(s) | 619, 657, 1587 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1629, 2247 |
| BseBI | CCWGG | 2 cut(s) | 117, 434 |
| BseDI | CCNNGG | 3 cut(s) | 432, 1697, 1937 |
| BseGI | GGATG | 3 cut(s) | 530, 973, 1698 |
| BseJI | GATNNNNATC | 2 cut(s) | 1629, 2247 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 142, 859, 1943, 1983, 2270 |
| BseMI | GCAATG | 3 cut(s) | 619, 657, 1587 |
| BseMII | CTCAG | 1 cut(s) | 1566 |
| BseNI | ACTGG | 4 cut(s) | 912, 1791, 1805, 1988 |
| BseRI | GAGGAG | 1 cut(s) | 584 |
| BseSI | GKGCMC | 2 cut(s) | 1227, 1915 |
| BseXI | GCAGC | 7 cut(s) | 383, 460, 511, 791, 829, 934, 2267 |
| BsgI | GTGCAG | 3 cut(s) | 798, 1584, 2175 |
| BshFI | GGCC | 5 cut(s) | 23, 431, 911, 1670, 1792 |
| BshNI | GGYRCC | 1 cut(s) | 630 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1915 |
| BsiHKCI | CYCGRG | 1 cut(s) | 817 |
| BsiSI | CCGG | 6 cut(s) | 521, 1221, 1476, 2000, 2264, 2271 |
| BslFI | GGGAC | 4 cut(s) | 525, 1164, 1933, 2171 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 142, 859, 1943, 1983, 2270 |
| BsmAI | GTCTC | 3 cut(s) | 233, 2181, 2272 |
| BsmFI | GGGAC | 4 cut(s) | 525, 1164, 1933, 2171 |
| BsmI | GAATGC | 5 cut(s) | 207, 317, 894, 1865, 1993 |
| BsnI | GGCC | 5 cut(s) | 23, 431, 911, 1670, 1792 |
| Bso31I | GGTCTC | 1 cut(s) | 2272 |
| BsoBI | CYCGRG | 1 cut(s) | 817 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1227, 1915, 1960 |
| Bsp1407I | TGTACA | 1 cut(s) | 1234 |
| BspACI | CCGC | 5 cut(s) | 44, 503, 1190, 1671, 1750 |
| BspANI | GGCC | 5 cut(s) | 23, 431, 911, 1670, 1792 |
| BspCNI | CTCAG | 1 cut(s) | 1565 |
| BspHI | TCATGA | 2 cut(s) | 730, 2139 |
| BspLI | GGNNCC | 5 cut(s) | 222, 632, 1063, 1791, 2127 |
| BspMAI | CTGCAG | 2 cut(s) | 172, 1399 |
| BspMI | ACCTGC | 2 cut(s) | 1261, 2088 |
| BspT107I | GGYRCC | 1 cut(s) | 630 |
| BspTNI | GGTCTC | 1 cut(s) | 2272 |
| BsrDI | GCAATG | 3 cut(s) | 619, 657, 1587 |
| BsrGI | TGTACA | 1 cut(s) | 1234 |
| BsrI | ACTGG | 4 cut(s) | 912, 1791, 1805, 1988 |
| BssECI | CCNNGG | 3 cut(s) | 432, 1697, 1937 |
| BssNI | GRCGYC | 2 cut(s) | 1586, 2116 |
| BssT1I | CCWWGG | 1 cut(s) | 1937 |
| Bst2UI | CCWGG | 2 cut(s) | 117, 434 |
| Bst4CI | ACNGT | 8 cut(s) | 296, 427, 482, 1239, 1530, 1924, 2071, 2107 |
| Bst6I | CTCTTC | 1 cut(s) | 2154 |
| BstACI | GRCGYC | 2 cut(s) | 1586, 2116 |
| BstAUI | TGTACA | 1 cut(s) | 1234 |
| BstC8I | GCNNGC | 4 cut(s) | 144, 1268, 1487, 1850 |
| BstDEI | CTNAG | 1 cut(s) | 1552 |
| BstF5I | GGATG | 3 cut(s) | 530, 973, 1698 |
| BstMAI | GTCTC | 3 cut(s) | 233, 2181, 2272 |
| BstNI | CCWGG | 2 cut(s) | 117, 434 |
| BstNSI | RCATGY | 6 cut(s) | 1106, 1255, 1322, 1474, 1518, 1830 |
| BstSCI | CCNGG | 3 cut(s) | 115, 432, 1220 |
| BstSFI | CTRYAG | 4 cut(s) | 168, 927, 1395, 1963 |
| BstSLI | GKGCMC | 2 cut(s) | 1227, 1915 |
| BstV1I | GCAGC | 7 cut(s) | 383, 460, 511, 791, 829, 934, 2267 |
| BstV2I | GAAGAC | 4 cut(s) | 1136, 1209, 1352, 1800 |
| BstX2I | RGATCY | 4 cut(s) | 220, 1735, 2125, 2242 |
| BstYI | RGATCY | 4 cut(s) | 220, 1735, 2125, 2242 |
| BsuI | GTATCC | 2 cut(s) | 1270, 1489 |
| BsuRI | GGCC | 5 cut(s) | 23, 431, 911, 1670, 1792 |
| BtgZI | GCGATG | 1 cut(s) | 161 |
| BtrI | CACGTC | 1 cut(s) | 157 |
| BtsCI | GGATG | 3 cut(s) | 530, 973, 1698 |
| BtsI | GCAGTG | 2 cut(s) | 719, 1463 |
| BtsIMutI | CAGTG | 8 cut(s) | 432, 475, 719, 919, 1244, 1463, 1929, 2112 |
| BveI | ACCTGC | 2 cut(s) | 1261, 2088 |
| Cac8I | GCNNGC | 4 cut(s) | 144, 1268, 1487, 1850 |
| CaiI | CAGNNNCTG | 2 cut(s) | 308, 785 |
| CciI | TCATGA | 2 cut(s) | 730, 2139 |
| Cfr13I | GGNCC | 6 cut(s) | 430, 555, 1043, 1668, 1790, 1974 |
| CseI | GACGC | 2 cut(s) | 666, 2105 |
| Csp6I | GTAC | 4 cut(s) | 423, 639, 1235, 1512 |
| CviQI | GTAC | 4 cut(s) | 423, 639, 1235, 1512 |
| DdeI | CTNAG | 1 cut(s) | 1552 |
| DraI | TTTAAA | 1 cut(s) | 1651 |
| DriI | GACNNNNNGTC | 1 cut(s) | 561 |
| Eam1104I | CTCTTC | 1 cut(s) | 2154 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 561 |
| EarI | CTCTTC | 1 cut(s) | 2154 |
| EciI | GGCGGA | 2 cut(s) | 59, 1205 |
| Eco130I | CCWWGG | 1 cut(s) | 1937 |
| Eco24I | GRGCYC | 1 cut(s) | 1960 |
| Eco31I | GGTCTC | 1 cut(s) | 2272 |
| Eco32I | GATATC | 1 cut(s) | 1309 |
| Eco47I | GGWCC | 3 cut(s) | 555, 1043, 1974 |
| Eco57I | CTGAAG | 2 cut(s) | 285, 451 |
| Eco88I | CYCGRG | 1 cut(s) | 817 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1790 |
| EcoRI | GAATTC | 2 cut(s) | 721, 2148 |
| EcoRII | CCWGG | 2 cut(s) | 115, 432 |
| EcoRV | GATATC | 1 cut(s) | 1309 |
| EcoT14I | CCWWGG | 1 cut(s) | 1937 |
| EcoT22I | ATGCAT | 2 cut(s) | 965, 1993 |
| EcoT38I | GRGCYC | 1 cut(s) | 1960 |
| ErhI | CCWWGG | 1 cut(s) | 1937 |
| FaqI | GGGAC | 4 cut(s) | 525, 1164, 1933, 2171 |
| FauNDI | CATATG | 3 cut(s) | 376, 583, 1011 |
| FbaI | TGATCA | 2 cut(s) | 379, 1243 |
| Fnu4HI | GCNGC | 9 cut(s) | 372, 474, 504, 525, 780, 843, 948, 1671, 2256 |
| FokI | GGATG | 3 cut(s) | 517, 980, 1705 |
| FriOI | GRGCYC | 1 cut(s) | 1960 |
| Fsp4HI | GCNGC | 9 cut(s) | 372, 474, 504, 525, 780, 843, 948, 1671, 2256 |
| FspBI | CTAG | 9 cut(s) | 152, 266, 507, 885, 1164, 1350, 1380, 1539, 1938 |
| GluI | GCNGC | 9 cut(s) | 372, 474, 504, 525, 780, 843, 948, 1671, 2256 |
| HaeIII | GGCC | 5 cut(s) | 23, 431, 911, 1670, 1792 |
| HapII | CCGG | 6 cut(s) | 521, 1221, 1476, 2000, 2264, 2271 |
| HgaI | GACGC | 2 cut(s) | 666, 2105 |
| Hin1I | GRCGYC | 2 cut(s) | 1586, 2116 |
| HindIII | AAGCTT | 1 cut(s) | 799 |
| HinfI | GANTC | 3 cut(s) | 517, 1556, 1766 |
| HpaII | CCGG | 6 cut(s) | 521, 1221, 1476, 2000, 2264, 2271 |
| HphI | GGTGA | 6 cut(s) | 272, 589, 682, 1958, 2069, 2219 |
| Hpy166II | GTNNAC | 6 cut(s) | 641, 690, 1080, 1367, 1402, 1913 |
| Hpy8I | GTNNAC | 6 cut(s) | 641, 690, 1080, 1367, 1402, 1913 |
| HpyAV | CCTTC | 8 cut(s) | 91, 392, 614, 762, 910, 1132, 1141, 1936 |
| HpyCH4III | ACNGT | 8 cut(s) | 296, 427, 482, 1239, 1530, 1924, 2071, 2107 |
| HpyCH4IV | ACGT | 4 cut(s) | 86, 156, 812, 1586 |
| HpyF3I | CTNAG | 1 cut(s) | 1552 |
| HpySE526I | ACGT | 4 cut(s) | 86, 156, 812, 1586 |
| Hsp92I | GRCGYC | 2 cut(s) | 1586, 2116 |
| Ksp22I | TGATCA | 2 cut(s) | 379, 1243 |
| LmnI | GCTCC | 7 cut(s) | 305, 314, 667, 1022, 1061, 1100, 2230 |
| Lsp1109I | GCAGC | 7 cut(s) | 383, 460, 511, 791, 829, 934, 2267 |
| LweI | GCATC | 3 cut(s) | 138, 950, 1683 |
| MaeI | CTAG | 9 cut(s) | 152, 266, 507, 885, 1164, 1350, 1380, 1539, 1938 |
| MaeII | ACGT | 4 cut(s) | 86, 156, 812, 1586 |
| MaeIII | GTNAC | 4 cut(s) | 577, 1517, 2065, 2071 |
| MfeI | CAATTG | 1 cut(s) | 1590 |
| MflI | RGATCY | 4 cut(s) | 220, 1735, 2125, 2242 |
| MhlI | GDGCHC | 3 cut(s) | 1227, 1915, 1960 |
| MlyI | GAGTC | 1 cut(s) | 511 |
| MmeI | TCCRAC | 2 cut(s) | 248, 955 |
| Mph1103I | ATGCAT | 2 cut(s) | 965, 1993 |
| MroXI | GAANNNNTTC | 5 cut(s) | 53, 402, 415, 1216, 1435 |
| MseI | TTAA | 3 cut(s) | 792, 1650, 1686 |
| MslI | CAYNNNNRTG | 3 cut(s) | 411, 1230, 2019 |
| MspA1I | CMGCKG | 2 cut(s) | 842, 2135 |
| MspI | CCGG | 6 cut(s) | 521, 1221, 1476, 2000, 2264, 2271 |
| MspR9I | CCNGG | 3 cut(s) | 117, 434, 1222 |
| MunI | CAATTG | 1 cut(s) | 1590 |
| Mva1269I | GAATGC | 5 cut(s) | 207, 317, 894, 1865, 1993 |
| MvaI | CCWGG | 2 cut(s) | 117, 434 |
| NciI | CCSGG | 1 cut(s) | 1222 |
| NdeI | CATATG | 3 cut(s) | 376, 583, 1011 |
| NlaIV | GGNNCC | 5 cut(s) | 222, 632, 1063, 1791, 2127 |
| NmuCI | GTSAC | 2 cut(s) | 577, 1517 |
| NsiI | ATGCAT | 2 cut(s) | 965, 1993 |
| NspI | RCATGY | 6 cut(s) | 1106, 1255, 1322, 1474, 1518, 1830 |
| PaeR7I | CTCGAG | 1 cut(s) | 817 |
| PagI | TCATGA | 2 cut(s) | 730, 2139 |
| PaqCI | CACCTGC | 2 cut(s) | 1261, 2088 |
| PciI | ACATGT | 3 cut(s) | 1470, 1514, 1826 |
| PctI | GAATGC | 5 cut(s) | 207, 317, 894, 1865, 1993 |
| PdmI | GAANNNNTTC | 5 cut(s) | 53, 402, 415, 1216, 1435 |
| PfeI | GAWTC | 2 cut(s) | 1556, 1766 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 142, 1983 |
| PkrI | GCNGC | 9 cut(s) | 373, 475, 505, 526, 781, 844, 949, 1672, 2257 |
| PleI | GAGTC | 1 cut(s) | 511 |
| PpsI | GAGTC | 1 cut(s) | 511 |
| PscI | ACATGT | 3 cut(s) | 1470, 1514, 1826 |
| Psp6I | CCWGG | 2 cut(s) | 115, 432 |
| PspGI | CCWGG | 2 cut(s) | 115, 432 |
| PspN4I | GGNNCC | 5 cut(s) | 222, 632, 1063, 1791, 2127 |
| PspPI | GGNCC | 6 cut(s) | 430, 555, 1043, 1668, 1790, 1974 |
| PstI | CTGCAG | 2 cut(s) | 172, 1399 |
| PstNI | CAGNNNCTG | 2 cut(s) | 308, 785 |
| PsuI | RGATCY | 4 cut(s) | 220, 1735, 2125, 2242 |
| PvuII | CAGCTG | 2 cut(s) | 842, 2135 |
| RsaI | GTAC | 4 cut(s) | 424, 640, 1236, 1513 |
| RsaNI | GTAC | 4 cut(s) | 423, 639, 1235, 1512 |
| RseI | CAYNNNNRTG | 3 cut(s) | 411, 1230, 2019 |
| SaqAI | TTAA | 3 cut(s) | 792, 1650, 1686 |
| SatI | GCNGC | 9 cut(s) | 372, 474, 504, 525, 780, 843, 948, 1671, 2256 |
| Sau96I | GGNCC | 6 cut(s) | 430, 555, 1043, 1668, 1790, 1974 |
| SchI | GAGTC | 1 cut(s) | 511 |
| ScrFI | CCNGG | 3 cut(s) | 117, 434, 1222 |
| SduI | GDGCHC | 3 cut(s) | 1227, 1915, 1960 |
| SfaNI | GCATC | 3 cut(s) | 138, 950, 1683 |
| SfcI | CTRYAG | 4 cut(s) | 168, 927, 1395, 1963 |
| Sfr274I | CTCGAG | 1 cut(s) | 817 |
| SinI | GGWCC | 3 cut(s) | 555, 1043, 1974 |
| SlaI | CTCGAG | 1 cut(s) | 817 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 411, 1230, 2019 |
| SmlI | CTYRAG | 1 cut(s) | 817 |
| SmoI | CTYRAG | 1 cut(s) | 817 |
| SpeI | ACTAGT | 1 cut(s) | 1538 |
| SsiI | CCGC | 5 cut(s) | 44, 503, 1190, 1671, 1750 |
| SspMI | CTAG | 9 cut(s) | 152, 266, 507, 885, 1164, 1350, 1380, 1539, 1938 |
| StyD4I | CCNGG | 3 cut(s) | 115, 432, 1220 |
| StyI | CCWWGG | 1 cut(s) | 1937 |
| TaaI | ACNGT | 8 cut(s) | 296, 427, 482, 1239, 1530, 1924, 2071, 2107 |
| TaiI | ACGT | 4 cut(s) | 89, 159, 815, 1589 |
| TaqI | TCGA | 5 cut(s) | 419, 515, 818, 1067, 1633 |
| TatI | WGTACW | 3 cut(s) | 422, 638, 1234 |
| TauI | GCSGC | 2 cut(s) | 506, 1673 |
| TfiI | GAWTC | 2 cut(s) | 1556, 1766 |
| Tru1I | TTAA | 3 cut(s) | 792, 1650, 1686 |
| Tru9I | TTAA | 3 cut(s) | 792, 1650, 1686 |
| TscAI | CASTG | 8 cut(s) | 432, 475, 719, 919, 1244, 1463, 1929, 2112 |
| TseFI | GTSAC | 2 cut(s) | 577, 1517 |
| TseI | GCWGC | 7 cut(s) | 371, 473, 524, 779, 842, 947, 2255 |
| Tsp45I | GTSAC | 2 cut(s) | 577, 1517 |
| TspDTI | ATGAA | 9 cut(s) | 310, 411, 519, 596, 608, 747, 1160, 1869, 2037 |
| TspRI | CASTG | 8 cut(s) | 432, 475, 719, 919, 1244, 1463, 1929, 2112 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 142, 1983 |
| VneI | GTGCAC | 1 cut(s) | 1911 |
| VpaK11BI | GGWCC | 3 cut(s) | 555, 1043, 1974 |
| XapI | RAATTY | 4 cut(s) | 700, 721, 1713, 2148 |
| XceI | RCATGY | 6 cut(s) | 1106, 1255, 1322, 1474, 1518, 1830 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1783 |
| XhoI | CTCGAG | 1 cut(s) | 817 |
| XmaJI | CCTAGG | 1 cut(s) | 1937 |
| XmnI | GAANNNNTTC | 5 cut(s) | 53, 402, 415, 1216, 1435 |
| XspI | CTAG | 9 cut(s) | 152, 266, 507, 885, 1164, 1350, 1380, 1539, 1938 |
| ZraI | GACGTC | 1 cut(s) | 1587 |
| Zsp2I | ATGCAT | 2 cut(s) | 965, 1993 |