Domain of unknown function (DUF3444)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1261, 2016 |
| AatII | GACGTC | 1 cut(s) | 1577 |
| Acc36I | ACCTGC | 2 cut(s) | 1261, 2016 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 142, 1911 |
| AciI | CCGC | 5 cut(s) | 44, 146, 503, 1190, 1659 |
| AcsI | RAATTY | 4 cut(s) | 700, 721, 1701, 2076 |
| AcuI | CTGAAG | 1 cut(s) | 451 |
| AcyI | GRCGYC | 2 cut(s) | 1574, 2044 |
| AfaI | GTAC | 4 cut(s) | 424, 640, 1236, 1501 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 142, 1728, 1871, 1911 |
| AflIII | ACRYGT | 4 cut(s) | 156, 1458, 1502, 1754 |
| AgsI | TTSAA | 9 cut(s) | 97, 726, 760, 904, 924, 1428, 1970, 2029, 2225 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 561 |
| AhlI | ACTAGT | 1 cut(s) | 1526 |
| AjiI | CACGTC | 1 cut(s) | 157 |
| AjnI | CCWGG | 3 cut(s) | 115, 301, 432 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 38, 70 |
| Alw21I | GWGCWC | 1 cut(s) | 1843 |
| Alw26I | GTCTC | 2 cut(s) | 233, 2109 |
| Alw44I | GTGCAC | 1 cut(s) | 1839 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 308, 785 |
| Ama87I | CYCGRG | 1 cut(s) | 817 |
| AoxI | GGCC | 5 cut(s) | 21, 429, 909, 1656, 1719 |
| ApaLI | GTGCAC | 1 cut(s) | 1839 |
| ApeKI | GCWGC | 6 cut(s) | 473, 524, 779, 842, 947, 2183 |
| ApoI | RAATTY | 4 cut(s) | 700, 721, 1701, 2076 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 76, 108 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 53, 402, 415, 1216, 1423 |
| AspA2I | CCTAGG | 1 cut(s) | 1865 |
| AspS9I | GGNCC | 6 cut(s) | 430, 555, 1043, 1656, 1719, 1902 |
| AsuC2I | CCSGG | 1 cut(s) | 1222 |
| AsuHPI | GGTGA | 6 cut(s) | 272, 589, 682, 1886, 1997, 2147 |
| AvaI | CYCGRG | 1 cut(s) | 817 |
| AvaII | GGWCC | 3 cut(s) | 555, 1043, 1902 |
| AvrII | CCTAGG | 1 cut(s) | 1865 |
| BaeGI | GKGCMC | 2 cut(s) | 1227, 1843 |
| BamHI | GGATCC | 2 cut(s) | 220, 2053 |
| BanII | GRGCYC | 1 cut(s) | 1888 |
| BbsI | GAAGAC | 4 cut(s) | 1136, 1209, 1352, 1728 |
| Bbv12I | GWGCWC | 1 cut(s) | 1843 |
| BbvI | GCAGC | 6 cut(s) | 460, 511, 791, 829, 934, 2195 |
| BccI | CCATC | 5 cut(s) | 34, 305, 633, 703, 1190 |
| BceAI | ACGGC | 2 cut(s) | 8, 885 |
| BciT130I | CCWGG | 3 cut(s) | 117, 303, 434 |
| BciVI | GTATCC | 2 cut(s) | 1270, 1477 |
| BclI | TGATCA | 2 cut(s) | 379, 1243 |
| BcnI | CCSGG | 1 cut(s) | 1222 |
| BcoDI | GTCTC | 2 cut(s) | 233, 2109 |
| BcuI | ACTAGT | 1 cut(s) | 1526 |
| BfmI | CTRYAG | 3 cut(s) | 927, 1395, 1891 |
| BfuAI | ACCTGC | 2 cut(s) | 1261, 2016 |
| BfuI | GTATCC | 2 cut(s) | 1270, 1477 |
| BglII | AGATCT | 1 cut(s) | 2143 |
| BisI | GCNGC | 8 cut(s) | 474, 504, 525, 780, 843, 948, 1659, 2184 |
| BlnI | CCTAGG | 1 cut(s) | 1865 |
| BlsI | GCNGC | 8 cut(s) | 475, 505, 526, 781, 844, 949, 1660, 2185 |
| Bme1390I | CCNGG | 4 cut(s) | 117, 303, 434, 1222 |
| Bme18I | GGWCC | 3 cut(s) | 555, 1043, 1902 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 561 |
| BmeT110I | CYCGRG | 1 cut(s) | 817 |
| BmgBI | CACGTC | 1 cut(s) | 157 |
| BmgT120I | GGNCC | 6 cut(s) | 430, 555, 1043, 1656, 1719, 1902 |
| BmiI | GGNNCC | 4 cut(s) | 222, 1063, 1720, 2055 |
| BmrFI | CCNGG | 4 cut(s) | 117, 303, 434, 1222 |
| BmrI | ACTGGG | 2 cut(s) | 1725, 1738 |
| BmsI | GCATC | 2 cut(s) | 950, 1671 |
| BmuI | ACTGGG | 2 cut(s) | 1725, 1738 |
| BpiI | GAAGAC | 4 cut(s) | 1136, 1209, 1352, 1728 |
| BpmI | CTGGAG | 1 cut(s) | 285 |
| BpuEI | CTTGAG | 1 cut(s) | 2225 |
| BpuMI | CCSGG | 1 cut(s) | 1222 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1617, 2175 |
| BsaHI | GRCGYC | 2 cut(s) | 1574, 2044 |
| BsaJI | CCNNGG | 3 cut(s) | 432, 1685, 1865 |
| BsaWI | WCCGGW | 1 cut(s) | 1927 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 38, 68 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 142, 1728, 1871, 1911 |
| Bse1I | ACTGG | 4 cut(s) | 912, 1720, 1733, 1916 |
| Bse3DI | GCAATG | 2 cut(s) | 657, 1575 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1617, 2175 |
| BseBI | CCWGG | 3 cut(s) | 117, 303, 434 |
| BseDI | CCNNGG | 3 cut(s) | 432, 1685, 1865 |
| BseGI | GGATG | 4 cut(s) | 530, 973, 1201, 1686 |
| BseJI | GATNNNNATC | 2 cut(s) | 1617, 2175 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 142, 1728, 1871, 1911 |
| BseMI | GCAATG | 2 cut(s) | 657, 1575 |
| BseMII | CTCAG | 1 cut(s) | 1554 |
| BseNI | ACTGG | 4 cut(s) | 912, 1720, 1733, 1916 |
| BseRI | GAGGAG | 1 cut(s) | 584 |
| BseSI | GKGCMC | 2 cut(s) | 1227, 1843 |
| BseXI | GCAGC | 6 cut(s) | 460, 511, 791, 829, 934, 2195 |
| BsgI | GTGCAG | 4 cut(s) | 189, 798, 1572, 2103 |
| BshFI | GGCC | 5 cut(s) | 23, 431, 911, 1658, 1721 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1843 |
| BsiHKCI | CYCGRG | 1 cut(s) | 817 |
| BsiSI | CCGG | 5 cut(s) | 521, 1221, 1464, 1928, 2192 |
| BslFI | GGGAC | 4 cut(s) | 525, 1164, 1861, 2099 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 142, 1728, 1871, 1911 |
| BsmAI | GTCTC | 2 cut(s) | 233, 2109 |
| BsmFI | GGGAC | 4 cut(s) | 525, 1164, 1861, 2099 |
| BsmI | GAATGC | 5 cut(s) | 207, 317, 894, 1793, 1921 |
| BsnI | GGCC | 5 cut(s) | 23, 431, 911, 1658, 1721 |
| BsoBI | CYCGRG | 1 cut(s) | 817 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1227, 1843, 1888 |
| Bsp1407I | TGTACA | 1 cut(s) | 1234 |
| BspACI | CCGC | 5 cut(s) | 44, 146, 503, 1190, 1659 |
| BspANI | GGCC | 5 cut(s) | 23, 431, 911, 1658, 1721 |
| BspCNI | CTCAG | 1 cut(s) | 1553 |
| BspHI | TCATGA | 2 cut(s) | 730, 2067 |
| BspLI | GGNNCC | 4 cut(s) | 222, 1063, 1720, 2055 |
| BspMAI | CTGCAG | 1 cut(s) | 1399 |
| BspMI | ACCTGC | 2 cut(s) | 1261, 2016 |
| BsrDI | GCAATG | 2 cut(s) | 657, 1575 |
| BsrGI | TGTACA | 1 cut(s) | 1234 |
| BsrI | ACTGG | 4 cut(s) | 912, 1720, 1733, 1916 |
| BssECI | CCNNGG | 3 cut(s) | 432, 1685, 1865 |
| BssNI | GRCGYC | 2 cut(s) | 1574, 2044 |
| BssT1I | CCWWGG | 1 cut(s) | 1865 |
| Bst2UI | CCWGG | 3 cut(s) | 117, 303, 434 |
| Bst4CI | ACNGT | 8 cut(s) | 296, 427, 482, 1239, 1518, 1852, 1999, 2035 |
| Bst6I | CTCTTC | 1 cut(s) | 2082 |
| BstACI | GRCGYC | 2 cut(s) | 1574, 2044 |
| BstAUI | TGTACA | 1 cut(s) | 1234 |
| BstC8I | GCNNGC | 5 cut(s) | 144, 999, 1268, 1475, 1778 |
| BstDEI | CTNAG | 1 cut(s) | 1540 |
| BstF5I | GGATG | 4 cut(s) | 530, 973, 1201, 1686 |
| BstMAI | GTCTC | 2 cut(s) | 233, 2109 |
| BstNI | CCWGG | 3 cut(s) | 117, 303, 434 |
| BstNSI | RCATGY | 6 cut(s) | 1106, 1255, 1322, 1462, 1506, 1758 |
| BstSCI | CCNGG | 4 cut(s) | 115, 301, 432, 1220 |
| BstSFI | CTRYAG | 3 cut(s) | 927, 1395, 1891 |
| BstSLI | GKGCMC | 2 cut(s) | 1227, 1843 |
| BstV1I | GCAGC | 6 cut(s) | 460, 511, 791, 829, 934, 2195 |
| BstV2I | GAAGAC | 4 cut(s) | 1136, 1209, 1352, 1728 |
| BstX2I | RGATCY | 4 cut(s) | 220, 2053, 2143, 2170 |
| BstYI | RGATCY | 4 cut(s) | 220, 2053, 2143, 2170 |
| BsuI | GTATCC | 2 cut(s) | 1270, 1477 |
| BsuRI | GGCC | 5 cut(s) | 23, 431, 911, 1658, 1721 |
| BtrI | CACGTC | 1 cut(s) | 157 |
| BtsCI | GGATG | 4 cut(s) | 530, 973, 1201, 1686 |
| BtsI | GCAGTG | 2 cut(s) | 719, 1451 |
| BtsIMutI | CAGTG | 8 cut(s) | 432, 475, 719, 919, 1244, 1451, 1857, 2040 |
| BveI | ACCTGC | 2 cut(s) | 1261, 2016 |
| Cac8I | GCNNGC | 5 cut(s) | 144, 999, 1268, 1475, 1778 |
| CaiI | CAGNNNCTG | 2 cut(s) | 308, 785 |
| CciI | TCATGA | 2 cut(s) | 730, 2067 |
| Cfr13I | GGNCC | 6 cut(s) | 430, 555, 1043, 1656, 1719, 1902 |
| CseI | GACGC | 2 cut(s) | 666, 2033 |
| Csp6I | GTAC | 4 cut(s) | 423, 639, 1235, 1500 |
| CviQI | GTAC | 4 cut(s) | 423, 639, 1235, 1500 |
| DdeI | CTNAG | 1 cut(s) | 1540 |
| DraI | TTTAAA | 1 cut(s) | 1639 |
| DriI | GACNNNNNGTC | 1 cut(s) | 561 |
| Eam1104I | CTCTTC | 1 cut(s) | 2082 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 561 |
| EarI | CTCTTC | 1 cut(s) | 2082 |
| EciI | GGCGGA | 2 cut(s) | 59, 1205 |
| Eco130I | CCWWGG | 1 cut(s) | 1865 |
| Eco24I | GRGCYC | 1 cut(s) | 1888 |
| Eco32I | GATATC | 1 cut(s) | 1309 |
| Eco47I | GGWCC | 3 cut(s) | 555, 1043, 1902 |
| Eco57I | CTGAAG | 1 cut(s) | 451 |
| Eco88I | CYCGRG | 1 cut(s) | 817 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1719 |
| EcoRI | GAATTC | 2 cut(s) | 721, 2076 |
| EcoRII | CCWGG | 3 cut(s) | 115, 301, 432 |
| EcoRV | GATATC | 1 cut(s) | 1309 |
| EcoT14I | CCWWGG | 1 cut(s) | 1865 |
| EcoT22I | ATGCAT | 2 cut(s) | 965, 1921 |
| EcoT38I | GRGCYC | 1 cut(s) | 1888 |
| ErhI | CCWWGG | 1 cut(s) | 1865 |
| FaqI | GGGAC | 4 cut(s) | 525, 1164, 1861, 2099 |
| FauNDI | CATATG | 3 cut(s) | 376, 583, 1011 |
| FbaI | TGATCA | 2 cut(s) | 379, 1243 |
| Fnu4HI | GCNGC | 8 cut(s) | 474, 504, 525, 780, 843, 948, 1659, 2184 |
| FokI | GGATG | 4 cut(s) | 517, 980, 1208, 1693 |
| FriOI | GRGCYC | 1 cut(s) | 1888 |
| Fsp4HI | GCNGC | 8 cut(s) | 474, 504, 525, 780, 843, 948, 1659, 2184 |
| GluI | GCNGC | 8 cut(s) | 474, 504, 525, 780, 843, 948, 1659, 2184 |
| GsuI | CTGGAG | 1 cut(s) | 285 |
| HaeIII | GGCC | 5 cut(s) | 23, 431, 911, 1658, 1721 |
| HapII | CCGG | 5 cut(s) | 521, 1221, 1464, 1928, 2192 |
| HgaI | GACGC | 2 cut(s) | 666, 2033 |
| Hin1I | GRCGYC | 2 cut(s) | 1574, 2044 |
| HindIII | AAGCTT | 1 cut(s) | 799 |
| HinfI | GANTC | 3 cut(s) | 517, 862, 1544 |
| HpaII | CCGG | 5 cut(s) | 521, 1221, 1464, 1928, 2192 |
| HphI | GGTGA | 6 cut(s) | 272, 589, 682, 1886, 1997, 2147 |
| Hpy166II | GTNNAC | 6 cut(s) | 641, 690, 1080, 1367, 1402, 1841 |
| Hpy8I | GTNNAC | 6 cut(s) | 641, 690, 1080, 1367, 1402, 1841 |
| HpyAV | CCTTC | 8 cut(s) | 91, 392, 614, 762, 910, 1132, 1141, 1864 |
| HpyCH4III | ACNGT | 8 cut(s) | 296, 427, 482, 1239, 1518, 1852, 1999, 2035 |
| HpyCH4IV | ACGT | 4 cut(s) | 86, 156, 812, 1574 |
| HpyF3I | CTNAG | 1 cut(s) | 1540 |
| HpySE526I | ACGT | 4 cut(s) | 86, 156, 812, 1574 |
| Hsp92I | GRCGYC | 2 cut(s) | 1574, 2044 |
| Ksp22I | TGATCA | 2 cut(s) | 379, 1243 |
| LmnI | GCTCC | 7 cut(s) | 305, 314, 667, 1022, 1061, 1100, 2158 |
| Lsp1109I | GCAGC | 6 cut(s) | 460, 511, 791, 829, 934, 2195 |
| LweI | GCATC | 2 cut(s) | 950, 1671 |
| MaeII | ACGT | 4 cut(s) | 86, 156, 812, 1574 |
| MaeIII | GTNAC | 4 cut(s) | 577, 1505, 1993, 1999 |
| MfeI | CAATTG | 1 cut(s) | 1578 |
| MflI | RGATCY | 4 cut(s) | 220, 2053, 2143, 2170 |
| MhlI | GDGCHC | 3 cut(s) | 1227, 1843, 1888 |
| MlyI | GAGTC | 1 cut(s) | 511 |
| MmeI | TCCRAC | 2 cut(s) | 248, 955 |
| Mph1103I | ATGCAT | 2 cut(s) | 965, 1921 |
| MroXI | GAANNNNTTC | 5 cut(s) | 53, 402, 415, 1216, 1423 |
| MseI | TTAA | 3 cut(s) | 792, 1638, 1674 |
| MslI | CAYNNNNRTG | 3 cut(s) | 411, 1230, 1947 |
| MspA1I | CMGCKG | 2 cut(s) | 842, 2063 |
| MspI | CCGG | 5 cut(s) | 521, 1221, 1464, 1928, 2192 |
| MspR9I | CCNGG | 4 cut(s) | 117, 303, 434, 1222 |
| MunI | CAATTG | 1 cut(s) | 1578 |
| Mva1269I | GAATGC | 5 cut(s) | 207, 317, 894, 1793, 1921 |
| MvaI | CCWGG | 3 cut(s) | 117, 303, 434 |
| NciI | CCSGG | 1 cut(s) | 1222 |
| NdeI | CATATG | 3 cut(s) | 376, 583, 1011 |
| NlaIV | GGNNCC | 4 cut(s) | 222, 1063, 1720, 2055 |
| NmuCI | GTSAC | 2 cut(s) | 577, 1505 |
| NsiI | ATGCAT | 2 cut(s) | 965, 1921 |
| NspI | RCATGY | 6 cut(s) | 1106, 1255, 1322, 1462, 1506, 1758 |
| PaeR7I | CTCGAG | 1 cut(s) | 817 |
| PagI | TCATGA | 2 cut(s) | 730, 2067 |
| PaqCI | CACCTGC | 2 cut(s) | 1261, 2016 |
| PciI | ACATGT | 3 cut(s) | 1458, 1502, 1754 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 625 |
| PctI | GAATGC | 5 cut(s) | 207, 317, 894, 1793, 1921 |
| PdmI | GAANNNNTTC | 5 cut(s) | 53, 402, 415, 1216, 1423 |
| PfeI | GAWTC | 2 cut(s) | 862, 1544 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 142, 1911 |
| PfoI | TCCNGGA | 1 cut(s) | 301 |
| PkrI | GCNGC | 8 cut(s) | 475, 505, 526, 781, 844, 949, 1660, 2185 |
| PleI | GAGTC | 1 cut(s) | 511 |
| PpsI | GAGTC | 1 cut(s) | 511 |
| PscI | ACATGT | 3 cut(s) | 1458, 1502, 1754 |
| Psp6I | CCWGG | 3 cut(s) | 115, 301, 432 |
| PspGI | CCWGG | 3 cut(s) | 115, 301, 432 |
| PspN4I | GGNNCC | 4 cut(s) | 222, 1063, 1720, 2055 |
| PspPI | GGNCC | 6 cut(s) | 430, 555, 1043, 1656, 1719, 1902 |
| PstI | CTGCAG | 1 cut(s) | 1399 |
| PstNI | CAGNNNCTG | 2 cut(s) | 308, 785 |
| PsuI | RGATCY | 4 cut(s) | 220, 2053, 2143, 2170 |
| PvuII | CAGCTG | 2 cut(s) | 842, 2063 |
| RsaI | GTAC | 4 cut(s) | 424, 640, 1236, 1501 |
| RsaNI | GTAC | 4 cut(s) | 423, 639, 1235, 1500 |
| RseI | CAYNNNNRTG | 3 cut(s) | 411, 1230, 1947 |
| SaqAI | TTAA | 3 cut(s) | 792, 1638, 1674 |
| SatI | GCNGC | 8 cut(s) | 474, 504, 525, 780, 843, 948, 1659, 2184 |
| Sau96I | GGNCC | 6 cut(s) | 430, 555, 1043, 1656, 1719, 1902 |
| SchI | GAGTC | 1 cut(s) | 511 |
| ScrFI | CCNGG | 4 cut(s) | 117, 303, 434, 1222 |
| SduI | GDGCHC | 3 cut(s) | 1227, 1843, 1888 |
| SfaNI | GCATC | 2 cut(s) | 950, 1671 |
| SfcI | CTRYAG | 3 cut(s) | 927, 1395, 1891 |
| Sfr274I | CTCGAG | 1 cut(s) | 817 |
| SinI | GGWCC | 3 cut(s) | 555, 1043, 1902 |
| SlaI | CTCGAG | 1 cut(s) | 817 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 411, 1230, 1947 |
| SmlI | CTYRAG | 2 cut(s) | 817, 2204 |
| SmoI | CTYRAG | 2 cut(s) | 817, 2204 |
| SpeI | ACTAGT | 1 cut(s) | 1526 |
| SsiI | CCGC | 5 cut(s) | 44, 146, 503, 1190, 1659 |
| StyD4I | CCNGG | 4 cut(s) | 115, 301, 432, 1220 |
| StyI | CCWWGG | 1 cut(s) | 1865 |
| TaaI | ACNGT | 8 cut(s) | 296, 427, 482, 1239, 1518, 1852, 1999, 2035 |
| TaiI | ACGT | 4 cut(s) | 89, 159, 815, 1577 |
| TaqI | TCGA | 5 cut(s) | 419, 515, 818, 1067, 1621 |
| TatI | WGTACW | 3 cut(s) | 422, 638, 1234 |
| TauI | GCSGC | 2 cut(s) | 506, 1661 |
| TfiI | GAWTC | 2 cut(s) | 862, 1544 |
| Tru1I | TTAA | 3 cut(s) | 792, 1638, 1674 |
| Tru9I | TTAA | 3 cut(s) | 792, 1638, 1674 |
| TscAI | CASTG | 8 cut(s) | 432, 475, 719, 919, 1244, 1451, 1857, 2040 |
| TseFI | GTSAC | 2 cut(s) | 577, 1505 |
| TseI | GCWGC | 6 cut(s) | 473, 524, 779, 842, 947, 2183 |
| Tsp45I | GTSAC | 2 cut(s) | 577, 1505 |
| TspDTI | ATGAA | 9 cut(s) | 310, 411, 519, 596, 747, 1160, 1526, 1797, 1965 |
| TspRI | CASTG | 8 cut(s) | 432, 475, 719, 919, 1244, 1451, 1857, 2040 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 142, 1911 |
| VneI | GTGCAC | 1 cut(s) | 1839 |
| VpaK11BI | GGWCC | 3 cut(s) | 555, 1043, 1902 |
| XapI | RAATTY | 4 cut(s) | 700, 721, 1701, 2076 |
| XceI | RCATGY | 6 cut(s) | 1106, 1255, 1322, 1462, 1506, 1758 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2163 |
| XhoI | CTCGAG | 1 cut(s) | 817 |
| XmaJI | CCTAGG | 1 cut(s) | 1865 |
| XmnI | GAANNNNTTC | 5 cut(s) | 53, 402, 415, 1216, 1423 |
| ZraI | GACGTC | 1 cut(s) | 1575 |
| Zsp2I | ATGCAT | 2 cut(s) | 965, 1921 |