Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0002332

Physical Location & Seq

Genomic Coordinates Reverse (-)

17200312 .. 17203509

Gene Structure 3198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1196800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGTGATCAATTCCAACGCTTGGCTTCCTTTCTTGTTGTTGGTGTCTTCTCTTTTACTTGCTTTCTCTGTGTCTTGCACTCTTGGTCTAGATAAAGACCAGCAATGTCAACAAGAATGTATGGACTTCCAAGGCCTTCCAAAGATCTCCGCGTGTTTGGCCCGTTGCAAGAATATGGGGCCCTGGTCGGGTTCTCCGGTTGCTGGCGAGCTGGTGTGGTACAGCCAATCTCATGGTCAGGAATGCCGACAGGAGTGTGAGAAGCAGGGAACTCGGGTCCCGCTGGAACATTGTCAAAGGCAGTGCATCCAGCAACGACACTTCGAGCAGTGCCACGAACAATGCCAACAGATCATTCAGTCGTCGGAGATATGCCAGAAGATTTGCCGCCAGCAAATTGAGGGAGGACAAGGTGGGGAGTTAGAAAGTTATGTTTCTAACCATCATGAGCTGCAGCAGTGTCAGCAGCGTTGTCAGTCGCAGCGCGGCCAAAAGCAGCACCAGTGTATGCAAGAATGCCAAGATCAAATGAGGCAACGGGGACAGCAGCAATGTCAGCAGCGTTGCCAATCGCAGCGTGGCCAAAAGCAGCATCAGTGTCTGCAAGAGTGCCAAGATCAAATGAGGCAACAAGGACAACAAGGACAACAACAATATGAGCAACAACAATGTCAGCAGAGTTGCCAGTCGCAGCGCGGCCAAAAGCAGCACGAGTGTATGCAAGAATGCCAAGATCAAATGAGGCAACAGGGACAACAGCAATGTCAACAGCGTTGCAAATCACAGCGTGGCCAAAAGCAGCATCAGTGTCTTCAAGAGTGCCAAGATCAAATGAGGCAACAAGGACAGCAGCAGCAGGGAGGCAGCAAAGGAAGAGTTCATCAGAACCCACATGGACAAAGAGAAGAGGATCAGATGATGGGGGGTCAGAGGAACAATCCCTTCTACTTCCCATCACAGATGTTTCAGTCACGGTTCCAGTCCAATGAAGGCAGTCTTCATGTGCTTGAGAGGTTCGGAAAGAGTGAGCTTCTTCGCGGCATTAAGAACTACCGCTTGGCCATCTTTGAGGCAATGCCTAACACTTTTGTTCTCCCACACCATTATGATGCTGAAGCGATTTTCGTGGTTCTCAACGGACAATGTAACTGTACTCTTCTGATGAAAGATAGAAAGGAGTCCTTCAACATGGAACATGGAGATGTGATTAGAGTTCCTGCAGGGGCTACTACCTACTTAATTAACAATAACAATGATGAATCTCTTCAAATTGCAAAGCTCATCCGCTCTGTTAACAGTCCTGGCCGATTTGAGGAATTCTTCCCTGCTGGTTCTGGAAATCCCGAGTCATACTTCAGCGTTTTCAGCAATGACATTCTTGAATCTGCCTTCAACACCCCAAGAGAGCAGCTAGAGCAGGGCTTTAGACAACAAAGGGGCCAAGGCATGGTCATGAGACCCCCAAAGGAGCAACTTGAGGCATTGAGTCAACGTCCTTCAGCCAGGCGTGAAGGACGCCGACAGTCTCACGGTCCGTTCAATCTGAGACAACAAACACCTGTGCACTCCAACAACTATGGCCAGTTCTTTGAGGCTCGCCCTGAAGAATTCAATCAGTTCCAGGACATGGATGTCTCAGTCAGTTGCATTGAGATGAACCAACAAACTATGATGGTGCCACACTTTAATTCAGAAGCTACATTCTTGATGTACGTTGTGGAAGGAAATGTACGTGTCGAAATGGCGTGCCCCCACTTGGCAAGCCAAATGCAAGGCCAAGGGATGATGGAACAACAAGAGCAGGGAGAGCACAGTGGAAGGTTCACGAAGGTCGTTGCTCAGCTGTCACCTGGTGATGCTTTCGTTGTCCCAGCTGGTCATCCTGTTGCCTTTGTTGCCCAGAACAACAATGGCAACCAAAACCAGAACATCCGAATCCTGGGATTCGGACTCAATGCCCAAAACAACATGAGGAACTTCCTTGCAGGGCAAAAGGATAACATAATGAATCAGATGGATAGGGAGGCTAAGCAGCTAGCATTTGGGCAAGAGATGGAAAGAATCTTTGGCGAGCAGCAGGAATCTTACTTTGTGCCAACTAAGAAGGGAAGAGGGAGAAGCCATCCGTTGTCTTCAACTTTGGAGTTTGCTGGCGTAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006950 GO:0006952 GO:0008150 GO:0009505 GO:0009605 GO:0009607 GO:0009615 GO:0009620 GO:0009719 GO:0009725 GO:0009735 GO:0010033 GO:0030312 GO:0031410 GO:0031982 GO:0033095 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0097708 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1 Vicilin_N

Protein Analysis

721

Amino Acids

82.71

Weight (kDa)

6.89

Isoelectric Point (pI)

63.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	359 - 426	3.4e-06	Cupin
Cupin_1	PF00190	513 - 682	2.2e-21	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22640
fragaria_vesca	FvH4_2g23190 FvH4_4g15931 FvH4_4g15931
malus_domestica	MD03G1261200.v1.1 MD11G1140200.v1.1 MD11G1281600.v1.1 MD13G1196800.v1.1 MD16G1197100.v1.1 MD16G1197200.v1.1
prunus_persica	Prupe.1G017700_v2.0.a1 Prupe.1G018000_v2.0.a1 Prupe.8G237500_v2.0.a1
pyrus_communis	pycom09g17330 pycom11g24970 pycom13g16920 pycom13g16930 pycom16g16590 pycom16g16620
rosa_chinensis	RchiOBHm_Chr4g0415511 RchiOBHm_Chr6g0290441
rosa_laevigata	RLG00000008067 RLG00000012215
rosa_multiflora	Rmu_sc0002890.1_g000006 Rmu_sc0007265.1_g000001 Rmu_sc0007625.1_g000002 Rmu_sc0020894.1_g000005 Rmu_sc0020894.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359290 Rroxscaffold_7G00177060
rosa_rugosa	Rorug04G0134600 Rorug06G0212700
rosa_samantha	Rh4AG195500 Rh4BG194300 Rh4CG206400 Rh4DG193300 Rh6AG322900 Rh6BG330300 Rh6CG336400 Rh6DG323300
rosa_wichuraiana	Rw4G016650 Rw6G027990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1631
AccB1I	GGYRCC	1 cut(s)	1675
AccB7I	CCANNNNNTGG	3 cut(s)	21, 1447, 1627
AccBSI	CCGCTC	1 cut(s)	1287
AccII	CGCG	4 cut(s)	152, 486, 696, 1038
AciI	CCGC	8 cut(s)	150, 281, 388, 486, 696, 1038, 1054, 1285
AclWI	GGATC	1 cut(s)	918
AcoI	YGGCCR	7 cut(s)	487, 580, 697, 790, 1059, 1303, 1579
AcsI	RAATTY	2 cut(s)	1316, 1607
AcuI	CTGAAG	4 cut(s)	1134, 1339, 1482, 1623
AcyI	GRCGYC	1 cut(s)	1516
AdeI	CACNNNGTG	2 cut(s)	788, 1853
AfaI	GTAC	4 cut(s)	221, 1153, 1712, 1731
AfiI	CCNNNNNNNGG	8 cut(s)	21, 188, 203, 1312, 1447, 1627, 1756, 1939
AflIII	ACRYGT	1 cut(s)	1732
AgsI	TTSAA	8 cut(s)	815, 1186, 1268, 1382, 1393, 1540, 1612, 2136
AjnI	CCWGG	6 cut(s)	182, 1300, 1502, 1620, 1849, 1938
AjuI	GAANNNNNNNTTGG	6 cut(s)	339, 371, 1040, 1072, 2049, 2081
AluBI	AGCT	9 cut(s)	211, 451, 1030, 1279, 1411, 1697, 1843, 1874, 2035
AluI	AGCT	9 cut(s)	211, 451, 1030, 1279, 1411, 1697, 1843, 1874, 2035
Alw21I	GWGCWC	2 cut(s)	1566, 1812
Alw26I	GTCTC	4 cut(s)	1450, 1530, 1540, 1639
Alw44I	GTGCAC	1 cut(s)	1562
AlwI	GGATC	1 cut(s)	918
AlwNI	CAGNNNCTG	1 cut(s)	601
Ama87I	CYCGRG	2 cut(s)	273, 1343
ApaI	GGGCCC	1 cut(s)	183
ApaLI	GTGCAC	1 cut(s)	1562
ApoI	RAATTY	2 cut(s)	1316, 1607
Asp700I	GAANNNNTTC	1 cut(s)	1263
AspLEI	GCGC	2 cut(s)	486, 696
AspS9I	GGNCC	6 cut(s)	160, 179, 180, 277, 1438, 1532
AsuHPI	GGTGA	3 cut(s)	16, 1839, 1865
AsuNHI	GCTAGC	1 cut(s)	2035
AvaI	CYCGRG	2 cut(s)	273, 1343
AvaII	GGWCC	2 cut(s)	277, 1532
BaeGI	GKGCMC	3 cut(s)	183, 1566, 1751
BalI	TGGCCA	4 cut(s)	582, 792, 1061, 1581
BanI	GGYRCC	1 cut(s)	1675
BanII	GRGCYC	1 cut(s)	183
BarI	GAAGNNNNNNTAC	2 cut(s)	1713, 1745
BauI	CACGAG	1 cut(s)	710
BbsI	GAAGAC	4 cut(s)	39, 803, 989, 2124
Bbv12I	GWGCWC	2 cut(s)	1566, 1812
BccI	CCATC	9 cut(s)	450, 913, 961, 1070, 1666, 1780, 2008, 2047, 2130
BcgI	CGANNNNNNTGC	2 cut(s)	254, 288
BciT130I	CCWGG	6 cut(s)	184, 1302, 1504, 1622, 1851, 1940
BclI	TGATCA	1 cut(s)	6
BcoDI	GTCTC	4 cut(s)	1450, 1530, 1540, 1639
BfaI	CTAG	3 cut(s)	89, 1412, 2036
BfmI	CTRYAG	2 cut(s)	452, 1218
BglII	AGATCT	1 cut(s)	144
BlpI	GCTNAGC	2 cut(s)	1839, 2028
Bme1390I	CCNGG	6 cut(s)	184, 1302, 1504, 1622, 1851, 1940
Bme18I	GGWCC	2 cut(s)	277, 1532
BmeT110I	CYCGRG	2 cut(s)	273, 1343
BmgT120I	GGNCC	6 cut(s)	160, 179, 180, 277, 1438, 1532
BmiI	GGNNCC	7 cut(s)	180, 181, 278, 279, 977, 1439, 1677
BmrFI	CCNGG	6 cut(s)	184, 1302, 1504, 1622, 1851, 1940
BmsI	GCATC	5 cut(s)	315, 601, 811, 1099, 1846
BmtI	GCTAGC	1 cut(s)	2039
BpiI	GAAGAC	4 cut(s)	39, 803, 989, 2124
Bpu1102I	GCTNAGC	2 cut(s)	1839, 2028
BpuEI	CTTGAG	2 cut(s)	1028, 1496
BsaAI	YACGTR	1 cut(s)	1733
BsaHI	GRCGYC	1 cut(s)	1516
BsaI	GGTCTC	1 cut(s)	1450
BsaJI	CCNNGG	5 cut(s)	130, 182, 1441, 1777, 1939
BsaWI	WCCGGW	1 cut(s)	196
Bsc4I	CCNNNNNNNGG	8 cut(s)	21, 188, 203, 1312, 1447, 1627, 1756, 1939
Bse1I	ACTGG	4 cut(s)	502, 685, 979, 1582
Bse3DI	GCAATG	5 cut(s)	110, 557, 767, 1080, 1375
BseBI	CCWGG	6 cut(s)	184, 1302, 1504, 1622, 1851, 1940
BseDI	CCNNGG	5 cut(s)	130, 182, 1441, 1777, 1939
BseGI	GGATG	7 cut(s)	306, 1281, 1636, 1788, 1879, 1929, 2122
BseLI	CCNNNNNNNGG	8 cut(s)	21, 188, 203, 1312, 1447, 1627, 1756, 1939
BseMI	GCAATG	5 cut(s)	110, 557, 767, 1080, 1375
BseMII	CTCAG	3 cut(s)	1535, 1650, 1853
BseNI	ACTGG	4 cut(s)	502, 685, 979, 1582
BseSI	GKGCMC	3 cut(s)	183, 1566, 1751
BseYI	CCCAGC	1 cut(s)	1870
Bsh1236I	CGCG	4 cut(s)	152, 486, 696, 1038
BshNI	GGYRCC	1 cut(s)	1675
BsiHKAI	GWGCWC	2 cut(s)	1566, 1812
BsiHKCI	CYCGRG	2 cut(s)	273, 1343
BsiSI	CCGG	1 cut(s)	197
BslFI	GGGAC	4 cut(s)	263, 555, 765, 1853
BslI	CCNNNNNNNGG	8 cut(s)	21, 188, 203, 1312, 1447, 1627, 1756, 1939
BsmAI	GTCTC	4 cut(s)	1450, 1530, 1540, 1639
BsmFI	GGGAC	4 cut(s)	263, 555, 765, 1853
BsmI	GAATGC	3 cut(s)	248, 521, 731
Bso31I	GGTCTC	1 cut(s)	1450
BsoBI	CYCGRG	2 cut(s)	273, 1343
Bsp120I	GGGCCC	1 cut(s)	179
Bsp1286I	GDGCHC	4 cut(s)	183, 1566, 1751, 1812
Bsp143I	GATC	8 cut(s)	6, 144, 351, 523, 616, 733, 826, 910
Bsp1720I	GCTNAGC	2 cut(s)	1839, 2028
BspACI	CCGC	8 cut(s)	150, 281, 388, 486, 696, 1038, 1054, 1285
BspCNI	CTCAG	3 cut(s)	1536, 1649, 1852
BspFNI	CGCG	4 cut(s)	152, 486, 696, 1038
BspHI	TCATGA	2 cut(s)	445, 1452
BspLI	GGNNCC	7 cut(s)	180, 181, 278, 279, 977, 1439, 1677
BspMAI	CTGCAG	2 cut(s)	456, 1222
BspOI	GCTAGC	1 cut(s)	2039
BspPI	GGATC	1 cut(s)	918
BspT107I	GGYRCC	1 cut(s)	1675
BspTNI	GGTCTC	1 cut(s)	1450
BsrBI	CCGCTC	1 cut(s)	1287
BsrDI	GCAATG	5 cut(s)	110, 557, 767, 1080, 1375
BsrI	ACTGG	4 cut(s)	502, 685, 979, 1582
BssECI	CCNNGG	5 cut(s)	130, 182, 1441, 1777, 1939
BssMI	GATC	8 cut(s)	6, 144, 351, 523, 616, 733, 826, 910
BssNI	GRCGYC	1 cut(s)	1516
BssSI	CACGAG	1 cut(s)	710
BssT1I	CCWWGG	3 cut(s)	130, 1441, 1777
Bst2BI	CACGAG	1 cut(s)	710
Bst2UI	CCWGG	6 cut(s)	184, 1302, 1504, 1622, 1851, 1940
Bst4CI	ACNGT	6 cut(s)	975, 1151, 1298, 1524, 1532, 1814
Bst6I	CTCTTC	5 cut(s)	868, 900, 1161, 1269, 2104
BstACI	GRCGYC	1 cut(s)	1516
BstBAI	YACGTR	1 cut(s)	1733
BstC8I	GCNNGC	9 cut(s)	205, 209, 392, 1597, 1747, 1762, 2037, 2072, 2152
BstDEI	CTNAG	5 cut(s)	1544, 1636, 1839, 2028, 2100
BstF5I	GGATG	7 cut(s)	306, 1281, 1636, 1788, 1879, 1929, 2122
BstFNI	CGCG	4 cut(s)	152, 486, 696, 1038
BstHHI	GCGC	2 cut(s)	486, 696
BstKTI	GATC	8 cut(s)	9, 147, 354, 526, 619, 736, 829, 913
BstMAI	GTCTC	4 cut(s)	1450, 1530, 1540, 1639
BstMBI	GATC	8 cut(s)	6, 144, 351, 523, 616, 733, 826, 910
BstMWI	GCNNNNNNNGC	7 cut(s)	158, 463, 556, 1365, 1414, 1807, 1895
BstNI	CCWGG	6 cut(s)	184, 1302, 1504, 1622, 1851, 1940
BstSCI	CCNGG	6 cut(s)	182, 1300, 1502, 1620, 1849, 1938
BstSFI	CTRYAG	2 cut(s)	452, 1218
BstSLI	GKGCMC	3 cut(s)	183, 1566, 1751
BstUI	CGCG	4 cut(s)	152, 486, 696, 1038
BstV2I	GAAGAC	4 cut(s)	39, 803, 989, 2124
BstX2I	RGATCY	1 cut(s)	144
BstXI	CCANNNNNNTGG	1 cut(s)	233
BstYI	RGATCY	1 cut(s)	144
BtsCI	GGATG	7 cut(s)	306, 1281, 1636, 1788, 1879, 1929, 2122
BtsI	GCAGTG	3 cut(s)	308, 335, 464
BtsIMutI	CAGTG	7 cut(s)	308, 335, 464, 509, 602, 812, 1819
Cac8I	GCNNGC	9 cut(s)	205, 209, 392, 1597, 1747, 1762, 2037, 2072, 2152
CaiI	CAGNNNCTG	1 cut(s)	601
CciI	TCATGA	2 cut(s)	445, 1452
CfoI	GCGC	2 cut(s)	486, 696
Cfr13I	GGNCC	6 cut(s)	160, 179, 180, 277, 1438, 1532
CpoI	CGGWCCG	1 cut(s)	1532
CseI	GACGC	1 cut(s)	1524
CsiI	ACCWGGT	1 cut(s)	1849
Csp6I	GTAC	4 cut(s)	220, 1152, 1711, 1730
CspI	CGGWCCG	1 cut(s)	1532
CviQI	GTAC	4 cut(s)	220, 1152, 1711, 1730
DdeI	CTNAG	5 cut(s)	1544, 1636, 1839, 2028, 2100
DpnI	GATC	8 cut(s)	8, 146, 353, 525, 618, 735, 828, 912
DpnII	GATC	8 cut(s)	6, 144, 351, 523, 616, 733, 826, 910
DraIII	CACNNNGTG	2 cut(s)	788, 1853
DrdI	GACNNNNNNGTC	1 cut(s)	1631
DseDI	GACNNNNNNGTC	1 cut(s)	1631
EaeI	YGGCCR	7 cut(s)	487, 580, 697, 790, 1059, 1303, 1579
Eam1104I	CTCTTC	5 cut(s)	868, 900, 1161, 1269, 2104
EarI	CTCTTC	5 cut(s)	868, 900, 1161, 1269, 2104
Eco130I	CCWWGG	3 cut(s)	130, 1441, 1777
Eco147I	AGGCCT	1 cut(s)	135
Eco24I	GRGCYC	1 cut(s)	183
Eco31I	GGTCTC	1 cut(s)	1450
Eco47I	GGWCC	2 cut(s)	277, 1532
Eco57I	CTGAAG	4 cut(s)	1134, 1339, 1482, 1623
Eco88I	CYCGRG	2 cut(s)	273, 1343
EcoO109I	RGGNCCY	3 cut(s)	179, 180, 277
EcoRI	GAATTC	2 cut(s)	1316, 1607
EcoRII	CCWGG	6 cut(s)	182, 1300, 1502, 1620, 1849, 1938
EcoT14I	CCWWGG	3 cut(s)	130, 1441, 1777
EcoT38I	GRGCYC	1 cut(s)	183
ErhI	CCWWGG	3 cut(s)	130, 1441, 1777
FalI	AAGNNNNNCTT	4 cut(s)	981, 1013, 1166, 1198
FaqI	GGGAC	4 cut(s)	263, 555, 765, 1853
FauI	CCCGC	1 cut(s)	288
FbaI	TGATCA	1 cut(s)	6
FokI	GGATG	7 cut(s)	293, 1268, 1643, 1795, 1866, 1916, 2109
FriOI	GRGCYC	1 cut(s)	183
FspBI	CTAG	3 cut(s)	89, 1412, 2036
GlaI	GCGC	2 cut(s)	485, 695
GsaI	CCCAGC	1 cut(s)	1874
HapII	CCGG	1 cut(s)	197
HgaI	GACGC	1 cut(s)	1524
HhaI	GCGC	2 cut(s)	486, 696
Hin1I	GRCGYC	1 cut(s)	1516
Hin6I	GCGC	2 cut(s)	484, 694
HinP1I	GCGC	2 cut(s)	484, 694
HincII	GTYRAC	4 cut(s)	110, 767, 1294, 1490
HindII	GTYRAC	4 cut(s)	110, 767, 1294, 1490
HpaI	GTTAAC	1 cut(s)	1294
HpaII	CCGG	1 cut(s)	197
HphI	GGTGA	3 cut(s)	16, 1839, 1865
Hpy166II	GTNNAC	6 cut(s)	110, 767, 1294, 1490, 1564, 1824
Hpy8I	GTNNAC	6 cut(s)	110, 767, 1294, 1490, 1564, 1824
Hpy99I	CGWCG	1 cut(s)	367
HpyCH4III	ACNGT	6 cut(s)	975, 1151, 1298, 1524, 1532, 1814
HpyCH4IV	ACGT	3 cut(s)	1492, 1713, 1732
HpyF10VI	GCNNNNNNNGC	7 cut(s)	158, 463, 556, 1365, 1414, 1807, 1895
HpyF3I	CTNAG	5 cut(s)	1544, 1636, 1839, 2028, 2100
HpySE526I	ACGT	3 cut(s)	1492, 1713, 1732
Hsp92I	GRCGYC	1 cut(s)	1516
HspAI	GCGC	2 cut(s)	484, 694
KflI	GGGWCCC	1 cut(s)	277
Ksp22I	TGATCA	1 cut(s)	6
KspAI	GTTAAC	1 cut(s)	1294
Kzo9I	GATC	8 cut(s)	6, 144, 351, 523, 616, 733, 826, 910
LmnI	GCTCC	1 cut(s)	1468
LweI	GCATC	5 cut(s)	315, 601, 811, 1099, 1846
MabI	ACCWGGT	1 cut(s)	1849
MaeI	CTAG	3 cut(s)	89, 1412, 2036
MaeII	ACGT	3 cut(s)	1492, 1713, 1732
MaeIII	GTNAC	3 cut(s)	969, 1145, 1845
MalI	GATC	8 cut(s)	8, 146, 353, 525, 618, 735, 828, 912
MbiI	CCGCTC	1 cut(s)	1287
MboI	GATC	8 cut(s)	6, 144, 351, 523, 616, 733, 826, 910
MflI	RGATCY	1 cut(s)	144
MhlI	GDGCHC	4 cut(s)	183, 1566, 1751, 1812
MlsI	TGGCCA	4 cut(s)	582, 792, 1061, 1581
MluCI	AATT	7 cut(s)	10, 396, 1239, 1269, 1316, 1607, 1687
MluNI	TGGCCA	4 cut(s)	582, 792, 1061, 1581
MlyI	GAGTC	4 cut(s)	1187, 1355, 1495, 1944
MmeI	TCCRAC	3 cut(s)	39, 345, 1593
Mox20I	TGGCCA	4 cut(s)	582, 792, 1061, 1581
MroXI	GAANNNNTTC	1 cut(s)	1263
MscI	TGGCCA	4 cut(s)	582, 792, 1061, 1581
MseI	TTAA	5 cut(s)	1044, 1238, 1242, 1293, 1686
MslI	CAYNNNNRTG	5 cut(s)	1104, 1107, 1200, 1451, 1652
Msp20I	TGGCCA	4 cut(s)	582, 792, 1061, 1581
MspA1I	CMGCKG	3 cut(s)	283, 1843, 1874
MspI	CCGG	1 cut(s)	197
MspR9I	CCNGG	6 cut(s)	184, 1302, 1504, 1622, 1851, 1940
Mva1269I	GAATGC	3 cut(s)	248, 521, 731
MvaI	CCWGG	6 cut(s)	184, 1302, 1504, 1622, 1851, 1940
MvnI	CGCG	4 cut(s)	152, 486, 696, 1038
MwoI	GCNNNNNNNGC	7 cut(s)	158, 463, 556, 1365, 1414, 1807, 1895
NdeII	GATC	8 cut(s)	6, 144, 351, 523, 616, 733, 826, 910
NheI	GCTAGC	1 cut(s)	2035
NlaIV	GGNNCC	7 cut(s)	180, 181, 278, 279, 977, 1439, 1677
NmuCI	GTSAC	2 cut(s)	969, 1845
PacI	TTAATTAA	1 cut(s)	1242
PagI	TCATGA	2 cut(s)	445, 1452
PceI	AGGCCT	1 cut(s)	135
PctI	GAATGC	3 cut(s)	248, 521, 731
PdmI	GAANNNNTTC	1 cut(s)	1263
PfeI	GAWTC	7 cut(s)	1259, 1382, 1935, 1944, 2008, 2061, 2081
PflMI	CCANNNNNTGG	3 cut(s)	21, 1447, 1627
PfoI	TCCNGGA	1 cut(s)	1620
PleI	GAGTC	4 cut(s)	1186, 1354, 1494, 1944
PpsI	GAGTC	4 cut(s)	1186, 1354, 1494, 1944
Ppu21I	YACGTR	1 cut(s)	1733
PpuMI	RGGWCCY	1 cut(s)	277
Psp5II	RGGWCCY	1 cut(s)	277
Psp6I	CCWGG	6 cut(s)	182, 1300, 1502, 1620, 1849, 1938
PspFI	CCCAGC	1 cut(s)	1870
PspGI	CCWGG	6 cut(s)	182, 1300, 1502, 1620, 1849, 1938
PspN4I	GGNNCC	7 cut(s)	180, 181, 278, 279, 977, 1439, 1677
PspOMI	GGGCCC	1 cut(s)	179
PspPI	GGNCC	6 cut(s)	160, 179, 180, 277, 1438, 1532
PspPPI	RGGWCCY	1 cut(s)	277
PstI	CTGCAG	2 cut(s)	456, 1222
PstNI	CAGNNNCTG	1 cut(s)	601
PsuI	RGATCY	1 cut(s)	144
PvuII	CAGCTG	2 cut(s)	1843, 1874
RsaI	GTAC	4 cut(s)	221, 1153, 1712, 1731
RsaNI	GTAC	4 cut(s)	220, 1152, 1711, 1730
RseI	CAYNNNNRTG	5 cut(s)	1104, 1107, 1200, 1451, 1652
Rsr2I	CGGWCCG	1 cut(s)	1532
RsrII	CGGWCCG	1 cut(s)	1532
SaqAI	TTAA	5 cut(s)	1044, 1238, 1242, 1293, 1686
Sau3AI	GATC	8 cut(s)	6, 144, 351, 523, 616, 733, 826, 910
Sau96I	GGNCC	6 cut(s)	160, 179, 180, 277, 1438, 1532
SbfI	CCTGCAGG	1 cut(s)	1222
SchI	GAGTC	4 cut(s)	1187, 1355, 1495, 1944
ScrFI	CCNGG	6 cut(s)	184, 1302, 1504, 1622, 1851, 1940
SdaI	CCTGCAGG	1 cut(s)	1222
SduI	GDGCHC	4 cut(s)	183, 1566, 1751, 1812
SexAI	ACCWGGT	1 cut(s)	1849
SfaNI	GCATC	5 cut(s)	315, 601, 811, 1099, 1846
SfcI	CTRYAG	2 cut(s)	452, 1218
SinI	GGWCC	2 cut(s)	277, 1532
SmiMI	CAYNNNNRTG	5 cut(s)	1104, 1107, 1200, 1451, 1652
SmlI	CTYRAG	2 cut(s)	1007, 1475
SmoI	CTYRAG	2 cut(s)	1007, 1475
Sse8387I	CCTGCAGG	1 cut(s)	1222
Sse9I	AATT	7 cut(s)	10, 396, 1239, 1269, 1316, 1607, 1687
SseBI	AGGCCT	1 cut(s)	135
SsiI	CCGC	8 cut(s)	150, 281, 388, 486, 696, 1038, 1054, 1285
SspMI	CTAG	3 cut(s)	89, 1412, 2036
StuI	AGGCCT	1 cut(s)	135
StyD4I	CCNGG	6 cut(s)	182, 1300, 1502, 1620, 1849, 1938
StyI	CCWWGG	3 cut(s)	130, 1441, 1777
TaaI	ACNGT	6 cut(s)	975, 1151, 1298, 1524, 1532, 1814
TaiI	ACGT	3 cut(s)	1495, 1716, 1735
TaqI	TCGA	2 cut(s)	324, 1737
TasI	AATT	7 cut(s)	10, 396, 1239, 1269, 1316, 1607, 1687
TatI	WGTACW	1 cut(s)	1151
TauI	GCSGC	4 cut(s)	390, 489, 699, 1041
TfiI	GAWTC	7 cut(s)	1259, 1382, 1935, 1944, 2008, 2061, 2081
Tru1I	TTAA	5 cut(s)	1044, 1238, 1242, 1293, 1686
Tru9I	TTAA	5 cut(s)	1044, 1238, 1242, 1293, 1686
TscAI	CASTG	7 cut(s)	308, 335, 464, 509, 602, 812, 1819
TseFI	GTSAC	2 cut(s)	969, 1845
Tsp45I	GTSAC	2 cut(s)	969, 1845
TspDTI	ATGAA	7 cut(s)	869, 989, 1002, 1178, 1272, 1670, 2021
TspGWI	ACGGA	3 cut(s)	1152, 1524, 2115
TspRI	CASTG	7 cut(s)	308, 335, 464, 509, 602, 812, 1819
Van91I	CCANNNNNTGG	3 cut(s)	21, 1447, 1627
VneI	GTGCAC	1 cut(s)	1562
VpaK11BI	GGWCC	2 cut(s)	277, 1532
XapI	RAATTY	2 cut(s)	1316, 1607
XbaI	TCTAGA	1 cut(s)	88
XcmI	CCANNNNNNNNNTGG	2 cut(s)	575, 1907
XmnI	GAANNNNTTC	1 cut(s)	1263
XspI	CTAG	3 cut(s)	89, 1412, 2036

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.