Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0002332

Physical Location & Seq

Genomic Coordinates Reverse (-)

52840042 .. 52841758

Gene Structure 1717 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG323300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGAGTTGAAAAGTAAGCTTTGTTTGGTTGTCTTGCTCTTCTCTGTTTTGCTTGCTGTGAGTGCTAGTCAGGACTATAAGGAGAGAGACCCTGAGCTGAAGCAGTGCAAGCACCAGTGCAAACACCAGAGAGGATATGATGAGCAAGAGAAGCAACTCTGCGAGCAGCGATGCGATGACTACATCAAGCAGAAGAGGCAGGACGAGAAGCAGCGAAGGAGAGAAGGAGAAGGAGGTACTAGTTTTTATAGATATGACGAGGATCAGTATCAGGGTCAGGGCCAACAACAACAGGACCAGAATCCCTACTTGTTTGAAGATCAGGATTTCGAGACCCAAATTGAAACAGATCAAGGCCGAGTTCAGATTCTTCAGAAGTTCACTGACAAGTCTGATCTGCTGCGCGGCATTGAGAATTTCCGGATTGGTTCCCTTGTCACCAAGCCTCACTCTTTTGTTGCTCCACACCATCATGATGCTGACTGTGTTCTCTTCGTCTTCCAGGGTCGACCAACCATTACTATGGTGAGAGGGGAGAAGAGAGAGAGCCATAACCTTGAACGTGGAGACATACTCAGGGTTCCAGCTGGTACACCTGTTTATATTATCAATAGAGACGATAATGAAAAGCTGTTTGTTGTGAAACTCCTCCATCCAGTCTCCCTTCCTGATCAGTTTGAGACATTTTATGAGGGAGGTGGTGAAAATCCAGAATCATTTTTGAAAGCTTTCAGTCCGGAGGTACTTCAAGCGGCTTTCAAGACTGAAAGAGATGAGCTGGAGAGGCTATTCGGGCAGCAGAGGCAAGGCAGCATCATGAAGGCCTCCAGAGAGCAAATTGAGAAGATGAGCCACAGTACTCGTGGCCATGAAGGATTTTGGCCTTTCCATGGTGATGAACCATCAACACCATTTTCAACATCATCATCGAAATCAGGCCCATTCAATCTGTTCAAAAAGCGGCCTTCTCAGTCAAACCGACACGGACGTCTCTTTGAAGCCGATTGCAATGACTACAAACAGCTCGAGGAGCTCGACCTCCAAATCTCTGTTGCTAACATTACTCGAGGGTCCATGACTGCTCCATCCTTCAACTCCAAAGCCACCAAGATTGCCTTTGTTTTGGATGGTGAGGGCTTCTTCGAGATGGCCTGCCCCCACCTTGCTTCCCAAGGAAGCTCCCAAGGAGGTTCCCAACACCAACAGCAACGTCAGCGGAGGAGCAGCAGCCCAAGCTACCAGAATGTACGAGGGGACTTGAGACGCGGTACCGTTTTTATTGTGCCGGCTGGCCATCCGGTGACTGCCATTGCCTCGAGCAACAATAACCTACAAGTCATCTGCTTTGAGGTGAATGCGAAAGACAATGTGAGGTTCCCTCTGGCTGGAAAGAAGAATGTGGTGAGTCTGTTTGAGAGGGAGGCAAAGGAGTTGGCATTTGGTGTTCCGGTGAGAGAGGTGGACCGCATCTTTAACAAGCAAGATGGCGAGTTTTTCCTGGAGGGACCGAACAATCAGCAGCAGGGTCGTATGTGGTCAGTGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0016020 GO:0019863 GO:0019865 GO:0044877

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

515

Amino Acids

58.9

Weight (kDa)

6.46

Isoelectric Point (pI)

52.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	145 - 257	4.9e-10	Cupin
Cupin_2	PF07883	149 - 209	3.4e-06	Cupin domain
Cupin_1	PF00190	315 - 483	3.6e-24	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22640
fragaria_vesca	FvH4_2g23190 FvH4_4g15931 FvH4_4g15931
malus_domestica	MD03G1261200.v1.1 MD11G1140200.v1.1 MD11G1281600.v1.1 MD13G1196800.v1.1 MD16G1197100.v1.1 MD16G1197200.v1.1
prunus_persica	Prupe.1G017700_v2.0.a1 Prupe.1G018000_v2.0.a1 Prupe.8G237500_v2.0.a1
pyrus_communis	pycom09g17330 pycom11g24970 pycom13g16920 pycom13g16930 pycom16g16590 pycom16g16620
rosa_chinensis	RchiOBHm_Chr4g0415511 RchiOBHm_Chr6g0290441
rosa_laevigata	RLG00000008067 RLG00000012215
rosa_multiflora	Rmu_sc0002890.1_g000006 Rmu_sc0007265.1_g000001 Rmu_sc0007625.1_g000002 Rmu_sc0020894.1_g000005 Rmu_sc0020894.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359290 Rroxscaffold_7G00177060
rosa_rugosa	Rorug04G0134600 Rorug06G0212700
rosa_samantha	Rh4AG195500 Rh4BG194300 Rh4CG206400 Rh4DG193300 Rh6AG322900 Rh6BG330300 Rh6CG336400 Rh6DG323300
rosa_wichuraiana	Rw4G016650 Rw6G027990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	987
AatII	GACGTC	1 cut(s)	991
Acc65I	GGTACC	1 cut(s)	1268
AccB1I	GGYRCC	1 cut(s)	1268
AccI	GTMKAC	1 cut(s)	508
AccII	CGCG	2 cut(s)	405, 1266
AccIII	TCCGGA	2 cut(s)	420, 736
AciI	CCGC	6 cut(s)	405, 752, 961, 1216, 1266, 1465
AclWI	GGATC	1 cut(s)	270
AcoI	YGGCCR	2 cut(s)	865, 1291
AcsI	RAATTY	1 cut(s)	415
AcuI	CTGAAG	2 cut(s)	119, 356
AcyI	GRCGYC	1 cut(s)	988
AfaI	GTAC	6 cut(s)	238, 592, 744, 859, 1248, 1270
AfiI	CCNNNNNNNGG	2 cut(s)	890, 1385
AhlI	ACTAGT	1 cut(s)	239
AjnI	CCWGG	2 cut(s)	501, 1497
Alw21I	GWGCWC	1 cut(s)	1035
Alw26I	GTCTC	8 cut(s)	81, 326, 561, 609, 664, 674, 995, 1255
AlwI	GGATC	1 cut(s)	270
Ama87I	CYCGRG	3 cut(s)	1025, 1065, 1315
Aor13HI	TCCGGA	2 cut(s)	420, 736
AoxI	GGCC	9 cut(s)	280, 355, 822, 865, 881, 937, 962, 1149, 1291
ApeKI	GCWGC	8 cut(s)	166, 211, 400, 796, 810, 1224, 1227, 1519
ApoI	RAATTY	1 cut(s)	415
Asp700I	GAANNNNTTC	1 cut(s)	728
Asp718I	GGTACC	1 cut(s)	1268
AspLEI	GCGC	1 cut(s)	405
AspS9I	GGNCC	6 cut(s)	280, 295, 938, 1071, 1462, 1505
AsuHPI	GGTGA	9 cut(s)	430, 538, 713, 905, 1142, 1312, 1363, 1414, 1462
AvaI	CYCGRG	3 cut(s)	1025, 1065, 1315
AvaII	GGWCC	4 cut(s)	295, 1071, 1462, 1505
BaeI	ACNNNNGTAYC	2 cut(s)	582, 615
BalI	TGGCCA	2 cut(s)	867, 1293
BanI	GGYRCC	1 cut(s)	1268
BanII	GRGCYC	1 cut(s)	1035
BauI	CACGAG	1 cut(s)	861
BbsI	GAAGAC	1 cut(s)	490
Bbv12I	GWGCWC	1 cut(s)	1035
BbvI	GCAGC	8 cut(s)	178, 223, 387, 808, 822, 1236, 1239, 1531
BccI	CCATC	8 cut(s)	477, 660, 910, 1093, 1121, 1141, 1302, 1478
BcgI	CGANNNNNNTGC	2 cut(s)	1508, 1542
BciT130I	CCWGG	2 cut(s)	503, 1499
BclI	TGATCA	1 cut(s)	670
BcoDI	GTCTC	8 cut(s)	81, 326, 561, 609, 664, 674, 995, 1255
BcuI	ACTAGT	1 cut(s)	239
BfaI	CTAG	2 cut(s)	66, 240
BmcAI	AGTACT	1 cut(s)	859
Bme1390I	CCNGG	2 cut(s)	503, 1499
Bme18I	GGWCC	4 cut(s)	295, 1071, 1462, 1505
BmeT110I	CYCGRG	3 cut(s)	1025, 1065, 1315
BmgT120I	GGNCC	6 cut(s)	280, 295, 938, 1071, 1462, 1505
BmiI	GGNNCC	7 cut(s)	430, 582, 1072, 1192, 1270, 1376, 1506
BmrFI	CCNGG	2 cut(s)	503, 1499
BmsI	GCATC	4 cut(s)	161, 466, 822, 1476
BpiI	GAAGAC	1 cut(s)	490
BplI	GAGNNNNNCTC	4 cut(s)	558, 590, 1363, 1395
BpmI	CTGGAG	3 cut(s)	800, 811, 1520
Bpu10I	CCTNAGC	1 cut(s)	93
BpuEI	CTTGAG	1 cut(s)	1279
BsaBI	GATNNNNATC	1 cut(s)	267
BsaHI	GRCGYC	1 cut(s)	988
BsaI	GGTCTC	2 cut(s)	81, 326
BsaJI	CCNNGG	4 cut(s)	502, 889, 1171, 1183
BsaWI	WCCGGW	4 cut(s)	420, 736, 1297, 1447
Bsc4I	CCNNNNNNNGG	2 cut(s)	890, 1385
Bse118I	RCCGGY	1 cut(s)	1285
Bse1I	ACTGG	2 cut(s)	115, 656
Bse3DI	GCAATG	2 cut(s)	1015, 1308
Bse8I	GATNNNNATC	1 cut(s)	267
BseAI	TCCGGA	2 cut(s)	420, 736
BseBI	CCWGG	2 cut(s)	503, 1499
BseDI	CCNNGG	4 cut(s)	502, 889, 1171, 1183
BseGI	GGATG	4 cut(s)	652, 1085, 1132, 1294
BseJI	GATNNNNATC	1 cut(s)	267
BseLI	CCNNNNNNNGG	2 cut(s)	890, 1385
BseMI	GCAATG	2 cut(s)	1015, 1308
BseMII	CTCAG	3 cut(s)	84, 589, 983
BseNI	ACTGG	2 cut(s)	115, 656
BseRI	GAGGAG	3 cut(s)	638, 1043, 1234
BseXI	GCAGC	8 cut(s)	178, 223, 387, 808, 822, 1236, 1239, 1531
Bsh1236I	CGCG	2 cut(s)	405, 1266
BshFI	GGCC	9 cut(s)	282, 357, 824, 867, 883, 939, 964, 1151, 1293
BshNI	GGYRCC	1 cut(s)	1268
BsiHKAI	GWGCWC	1 cut(s)	1035
BsiHKCI	CYCGRG	3 cut(s)	1025, 1065, 1315
BsiSI	CCGG	5 cut(s)	421, 737, 1286, 1298, 1448
BslFI	GGGAC	2 cut(s)	1268, 1518
BslI	CCNNNNNNNGG	2 cut(s)	890, 1385
BsmAI	GTCTC	8 cut(s)	81, 326, 561, 609, 664, 674, 995, 1255
BsmBI	CGTCTC	3 cut(s)	609, 995, 1255
BsmFI	GGGAC	2 cut(s)	1268, 1518
BsmI	GAATGC	1 cut(s)	1360
BsnI	GGCC	9 cut(s)	282, 357, 824, 867, 883, 939, 964, 1151, 1293
Bso31I	GGTCTC	2 cut(s)	81, 326
BsoBI	CYCGRG	3 cut(s)	1025, 1065, 1315
Bsp1286I	GDGCHC	1 cut(s)	1035
Bsp13I	TCCGGA	2 cut(s)	420, 736
Bsp143I	GATC	5 cut(s)	262, 319, 349, 394, 670
Bsp19I	CCATGG	1 cut(s)	889
BspACI	CCGC	6 cut(s)	405, 752, 961, 1216, 1266, 1465
BspANI	GGCC	9 cut(s)	282, 357, 824, 867, 883, 939, 964, 1151, 1293
BspCNI	CTCAG	3 cut(s)	85, 588, 982
BspEI	TCCGGA	2 cut(s)	420, 736
BspFNI	CGCG	2 cut(s)	405, 1266
BspHI	TCATGA	2 cut(s)	472, 816
BspLI	GGNNCC	7 cut(s)	430, 582, 1072, 1192, 1270, 1376, 1506
BspPI	GGATC	1 cut(s)	270
BspQI	GCTCTTC	1 cut(s)	44
BspT107I	GGYRCC	1 cut(s)	1268
BspTNI	GGTCTC	2 cut(s)	81, 326
BsrDI	GCAATG	2 cut(s)	1015, 1308
BsrFI	RCCGGY	1 cut(s)	1285
BsrI	ACTGG	2 cut(s)	115, 656
BssAI	RCCGGY	1 cut(s)	1285
BssECI	CCNNGG	4 cut(s)	502, 889, 1171, 1183
BssMI	GATC	5 cut(s)	262, 319, 349, 394, 670
BssNI	GRCGYC	1 cut(s)	988
BssSI	CACGAG	1 cut(s)	861
BssT1I	CCWWGG	3 cut(s)	889, 1171, 1183
Bst2BI	CACGAG	1 cut(s)	861
Bst2UI	CCWGG	2 cut(s)	503, 1499
Bst4CI	ACNGT	3 cut(s)	485, 857, 1273
Bst6I	CTCTTC	4 cut(s)	44, 188, 497, 533
BstACI	GRCGYC	1 cut(s)	988
BstC8I	GCNNGC	6 cut(s)	54, 110, 164, 1153, 1287, 1291
BstDEI	CTNAG	3 cut(s)	93, 575, 969
BstDSI	CCRYGG	1 cut(s)	889
BstF5I	GGATG	4 cut(s)	652, 1085, 1132, 1294
BstFNI	CGCG	2 cut(s)	405, 1266
BstHHI	GCGC	1 cut(s)	405
BstKTI	GATC	5 cut(s)	265, 322, 352, 397, 673
BstMAI	GTCTC	8 cut(s)	81, 326, 561, 609, 664, 674, 995, 1255
BstMBI	GATC	5 cut(s)	262, 319, 349, 394, 670
BstNI	CCWGG	2 cut(s)	503, 1499
BstSCI	CCNGG	2 cut(s)	501, 1497
BstUI	CGCG	2 cut(s)	405, 1266
BstV1I	GCAGC	8 cut(s)	178, 223, 387, 808, 822, 1236, 1239, 1531
BstV2I	GAAGAC	1 cut(s)	490
BstXI	CCANNNNNNTGG	1 cut(s)	523
BsuRI	GGCC	9 cut(s)	282, 357, 824, 867, 883, 939, 964, 1151, 1293
BtgI	CCRYGG	1 cut(s)	889
BtgZI	GCGATG	2 cut(s)	184, 189
BtsCI	GGATG	4 cut(s)	652, 1085, 1132, 1294
BtsI	GCAGTG	1 cut(s)	110
BtsIMutI	CAGTG	4 cut(s)	110, 122, 381, 1545
Cac8I	GCNNGC	6 cut(s)	54, 110, 164, 1153, 1287, 1291
CciI	TCATGA	2 cut(s)	472, 816
CfoI	GCGC	1 cut(s)	405
Cfr10I	RCCGGY	1 cut(s)	1285
Cfr13I	GGNCC	6 cut(s)	280, 295, 938, 1071, 1462, 1505
CseI	GACGC	1 cut(s)	1272
Csp6I	GTAC	6 cut(s)	237, 591, 743, 858, 1247, 1269
CspCI	CAANNNNNGTGG	2 cut(s)	1093, 1128
CviAII	CATG	5 cut(s)	473, 817, 869, 890, 1075
CviQI	GTAC	6 cut(s)	237, 591, 743, 858, 1247, 1269
DdeI	CTNAG	3 cut(s)	93, 575, 969
DpnI	GATC	5 cut(s)	264, 321, 351, 396, 672
DpnII	GATC	5 cut(s)	262, 319, 349, 394, 670
DrdI	GACNNNNNNGTC	1 cut(s)	987
DseDI	GACNNNNNNGTC	1 cut(s)	987
EaeI	YGGCCR	2 cut(s)	865, 1291
Eam1104I	CTCTTC	4 cut(s)	44, 188, 497, 533
EarI	CTCTTC	4 cut(s)	44, 188, 497, 533
Ecl136II	GAGCTC	1 cut(s)	1033
Eco130I	CCWWGG	3 cut(s)	889, 1171, 1183
Eco147I	AGGCCT	1 cut(s)	824
Eco24I	GRGCYC	1 cut(s)	1035
Eco31I	GGTCTC	2 cut(s)	81, 326
Eco47I	GGWCC	4 cut(s)	295, 1071, 1462, 1505
Eco53kI	GAGCTC	1 cut(s)	1033
Eco57I	CTGAAG	2 cut(s)	119, 356
Eco88I	CYCGRG	3 cut(s)	1025, 1065, 1315
EcoICRI	GAGCTC	1 cut(s)	1033
EcoRII	CCWGG	2 cut(s)	501, 1497
EcoT14I	CCWWGG	3 cut(s)	889, 1171, 1183
EcoT38I	GRGCYC	1 cut(s)	1035
ErhI	CCWWGG	3 cut(s)	889, 1171, 1183
Esp3I	CGTCTC	3 cut(s)	609, 995, 1255
FaeI	CATG	5 cut(s)	476, 820, 872, 893, 1078
FalI	AAGNNNNNCTT	2 cut(s)	1100, 1132
FaqI	GGGAC	2 cut(s)	1268, 1518
FatI	CATG	5 cut(s)	472, 816, 868, 889, 1074
FbaI	TGATCA	1 cut(s)	670
FblI	GTMKAC	1 cut(s)	508
FokI	GGATG	4 cut(s)	639, 1072, 1139, 1281
FriOI	GRGCYC	1 cut(s)	1035
FspBI	CTAG	2 cut(s)	66, 240
GlaI	GCGC	1 cut(s)	404
GsuI	CTGGAG	3 cut(s)	800, 811, 1520
HaeIII	GGCC	9 cut(s)	282, 357, 824, 867, 883, 939, 964, 1151, 1293
HapII	CCGG	5 cut(s)	421, 737, 1286, 1298, 1448
HgaI	GACGC	1 cut(s)	1272
HhaI	GCGC	1 cut(s)	405
Hin1I	GRCGYC	1 cut(s)	988
Hin1II	CATG	5 cut(s)	476, 820, 872, 893, 1078
Hin6I	GCGC	1 cut(s)	403
HinP1I	GCGC	1 cut(s)	403
HincII	GTYRAC	1 cut(s)	509
HindII	GTYRAC	1 cut(s)	509
HindIII	AAGCTT	2 cut(s)	17, 726
HinfI	GANTC	4 cut(s)	301, 367, 713, 1405
HpaII	CCGG	5 cut(s)	421, 737, 1286, 1298, 1448
HphI	GGTGA	9 cut(s)	430, 538, 713, 905, 1142, 1312, 1363, 1414, 1462
Hpy166II	GTNNAC	4 cut(s)	381, 509, 593, 1462
Hpy188I	TCNGA	3 cut(s)	366, 375, 394
Hpy8I	GTNNAC	4 cut(s)	381, 509, 593, 1462
HpyAV	CCTTC	8 cut(s)	210, 218, 224, 674, 814, 866, 975, 1099
HpyCH4III	ACNGT	3 cut(s)	485, 857, 1273
HpyCH4IV	ACGT	3 cut(s)	562, 988, 1210
HpyCH4V	TGCA	3 cut(s)	108, 120, 1008
HpyF3I	CTNAG	3 cut(s)	93, 575, 969
HpySE526I	ACGT	3 cut(s)	562, 988, 1210
Hsp92I	GRCGYC	1 cut(s)	988
Hsp92II	CATG	5 cut(s)	476, 820, 872, 893, 1078
HspAI	GCGC	1 cut(s)	403
Kpn2I	TCCGGA	2 cut(s)	420, 736
KpnI	GGTACC	1 cut(s)	1272
KroI	GCCGGC	1 cut(s)	1285
KroNI	GCCGGC	1 cut(s)	1287
Ksp22I	TGATCA	1 cut(s)	670
Kzo9I	GATC	5 cut(s)	262, 319, 349, 394, 670
LguI	GCTCTTC	1 cut(s)	44
LmnI	GCTCC	5 cut(s)	466, 1030, 1087, 1184, 1221
Lsp1109I	GCAGC	8 cut(s)	178, 223, 387, 808, 822, 1236, 1239, 1531
LweI	GCATC	4 cut(s)	161, 466, 822, 1476
MaeI	CTAG	2 cut(s)	66, 240
MaeII	ACGT	3 cut(s)	562, 988, 1210
MaeIII	GTNAC	2 cut(s)	436, 1300
MalI	GATC	5 cut(s)	264, 321, 351, 396, 672
MboI	GATC	5 cut(s)	262, 319, 349, 394, 670
MhlI	GDGCHC	1 cut(s)	1035
MlsI	TGGCCA	2 cut(s)	867, 1293
MluCI	AATT	3 cut(s)	339, 415, 837
MluNI	TGGCCA	2 cut(s)	867, 1293
MlyI	GAGTC	1 cut(s)	1414
Mox20I	TGGCCA	2 cut(s)	867, 1293
MroI	TCCGGA	2 cut(s)	420, 736
MroNI	GCCGGC	1 cut(s)	1285
MroXI	GAANNNNTTC	1 cut(s)	728
MscI	TGGCCA	2 cut(s)	867, 1293
MseI	TTAA	1 cut(s)	1473
MslI	CAYNNNNRTG	4 cut(s)	471, 474, 521, 894
Msp20I	TGGCCA	2 cut(s)	867, 1293
MspA1I	CMGCKG	2 cut(s)	587, 1216
MspI	CCGG	5 cut(s)	421, 737, 1286, 1298, 1448
MspR9I	CCNGG	2 cut(s)	503, 1499
Mva1269I	GAATGC	1 cut(s)	1360
MvaI	CCWGG	2 cut(s)	503, 1499
MvnI	CGCG	2 cut(s)	405, 1266
NaeI	GCCGGC	1 cut(s)	1287
NcoI	CCATGG	1 cut(s)	889
NdeII	GATC	5 cut(s)	262, 319, 349, 394, 670
NgoMIV	GCCGGC	1 cut(s)	1285
NlaIII	CATG	5 cut(s)	476, 820, 872, 893, 1078
NlaIV	GGNNCC	7 cut(s)	430, 582, 1072, 1192, 1270, 1376, 1506
NmeAIII	GCCGAG	1 cut(s)	383
NmuCI	GTSAC	2 cut(s)	436, 1300
PaeR7I	CTCGAG	3 cut(s)	1025, 1065, 1315
PagI	TCATGA	2 cut(s)	472, 816
PceI	AGGCCT	1 cut(s)	824
PciSI	GCTCTTC	1 cut(s)	44
PcsI	WCGNNNNNNNCGW	1 cut(s)	1032
PctI	GAATGC	1 cut(s)	1360
PdiI	GCCGGC	1 cut(s)	1287
PdmI	GAANNNNTTC	1 cut(s)	728
PfeI	GAWTC	3 cut(s)	301, 367, 713
PfoI	TCCNGGA	1 cut(s)	1497
PleI	GAGTC	1 cut(s)	1413
PpsI	GAGTC	1 cut(s)	1413
Psp124BI	GAGCTC	1 cut(s)	1035
Psp6I	CCWGG	2 cut(s)	501, 1497
PspGI	CCWGG	2 cut(s)	501, 1497
PspN4I	GGNNCC	7 cut(s)	430, 582, 1072, 1192, 1270, 1376, 1506
PspPI	GGNCC	6 cut(s)	280, 295, 938, 1071, 1462, 1505
PspXI	VCTCGAGB	3 cut(s)	1025, 1065, 1315
PvuII	CAGCTG	1 cut(s)	587
RsaI	GTAC	6 cut(s)	238, 592, 744, 859, 1248, 1270
RsaNI	GTAC	6 cut(s)	237, 591, 743, 858, 1247, 1269
RseI	CAYNNNNRTG	4 cut(s)	471, 474, 521, 894
SacI	GAGCTC	1 cut(s)	1035
SalI	GTCGAC	1 cut(s)	507
SapI	GCTCTTC	1 cut(s)	44
SaqAI	TTAA	1 cut(s)	1473
Sau3AI	GATC	5 cut(s)	262, 319, 349, 394, 670
Sau96I	GGNCC	6 cut(s)	280, 295, 938, 1071, 1462, 1505
ScaI	AGTACT	1 cut(s)	859
SchI	GAGTC	1 cut(s)	1414
ScrFI	CCNGG	2 cut(s)	503, 1499
SduI	GDGCHC	1 cut(s)	1035
SfaNI	GCATC	4 cut(s)	161, 466, 822, 1476
Sfr274I	CTCGAG	3 cut(s)	1025, 1065, 1315
SinI	GGWCC	4 cut(s)	295, 1071, 1462, 1505
SlaI	CTCGAG	3 cut(s)	1025, 1065, 1315
SmiMI	CAYNNNNRTG	4 cut(s)	471, 474, 521, 894
SmlI	CTYRAG	4 cut(s)	1025, 1065, 1258, 1315
SmoI	CTYRAG	4 cut(s)	1025, 1065, 1258, 1315
SpeI	ACTAGT	1 cut(s)	239
Sse9I	AATT	3 cut(s)	339, 415, 837
SseBI	AGGCCT	1 cut(s)	824
SsiI	CCGC	6 cut(s)	405, 752, 961, 1216, 1266, 1465
SspMI	CTAG	2 cut(s)	66, 240
SstI	GAGCTC	1 cut(s)	1035
StuI	AGGCCT	1 cut(s)	824
StyD4I	CCNGG	2 cut(s)	501, 1497
StyI	CCWWGG	3 cut(s)	889, 1171, 1183
TaaI	ACNGT	3 cut(s)	485, 857, 1273
TaiI	ACGT	3 cut(s)	565, 991, 1213
TaqI	TCGA	8 cut(s)	330, 508, 929, 1026, 1035, 1066, 1143, 1316
TaqII	GACCGA	1 cut(s)	1522
TasI	AATT	3 cut(s)	339, 415, 837
TatI	WGTACW	1 cut(s)	857
TauI	GCSGC	3 cut(s)	408, 755, 964
TfiI	GAWTC	3 cut(s)	301, 367, 713
Tru1I	TTAA	1 cut(s)	1473
Tru9I	TTAA	1 cut(s)	1473
TscAI	CASTG	4 cut(s)	110, 122, 388, 1545
TseFI	GTSAC	2 cut(s)	436, 1300
TseI	GCWGC	8 cut(s)	166, 211, 400, 796, 810, 1224, 1227, 1519
Tsp45I	GTSAC	2 cut(s)	436, 1300
TspDTI	ATGAA	4 cut(s)	639, 833, 885, 912
TspGWI	ACGGA	1 cut(s)	999
TspRI	CASTG	4 cut(s)	110, 122, 388, 1545
VpaK11BI	GGWCC	4 cut(s)	295, 1071, 1462, 1505
XapI	RAATTY	1 cut(s)	415
XcmI	CCANNNNNNNNNTGG	1 cut(s)	860
XhoI	CTCGAG	3 cut(s)	1025, 1065, 1315
XmiI	GTMKAC	1 cut(s)	508
XmnI	GAANNNNTTC	1 cut(s)	728
XspI	CTAG	2 cut(s)	66, 240
ZraI	GACGTC	1 cut(s)	989
ZrmI	AGTACT	1 cut(s)	859

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.