Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0002332

Physical Location & Seq

Genomic Coordinates Forward (+)

43396720 .. 43400194

Gene Structure 3475 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG206400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGCGATACTCAAAACTTTTTTCCTTTCCACTCTTCTCCTCGCCTCAATCTCCTTCTCTCTTGCTTATCATCATGAGGATCCTTCCCAGCAGTTGGAGCAATGCCAGCTGCGATGCCAGGAGGAGATGCCGCGCGGCCTTCAACAGCAGCAGTGCCAGCAAGAATGCAGAGAGCGGATGCAGCAGCAGGGAGGTCAAGGTGGCGGTAGCAGAACCCCGTTCTCTCGTGATCCTGAGCAGAAGTTTGAGCAGTGCGTGGAGAGTTGCCAGTCGAGGCAACACGGCCAGCAACAGCAGCAGCAATGCCGCCAACAATGCGGTCAACAAATGAGCCAGCACGAGCGCCAACAAATGTGCCAAAGACGTTGTCAGATGCAAGACAGTGGTCAGCAACAGTGCCAAAGAAGGTGCATGCAGCAGCTCGAGCAAGGAGAACTAGACATTAATACATCAAGAGATCCCGAACAAAAACTTGAGCAATGCCAACAGAGTTGCCAATCGAGGCAACAAGGCCAACAACAGCACCAGCAGTGCCGTCAACAATGCGCACAGCAATTGAGCCAGCGAGAGCGTCAACAAATCTGCCAAAGACGTTGTCAGATGCAAGACAGTGGTCAGCAACAGTGCCAAAAAAGGTGCATGCAGCAGCTCGAGCAAGGAGAACTAGACATTAACACATCAAGAGATCCCGAACAAAAACTTGAGAAATGCCAACAGGGTTGCCAATCAAGGCAACAAGGCCAACAAGAGCAGCAGCAGCAGTGCCGTCAGCAATGTGCACAGCAATTGAGCCAGCGAGAGCGTCAACAAATCTGTGAGCAACGCTGCCAGAGGCAACAACGTGGGGATCAACAACAGAAACAACAGTGCCAAAGTAGGTGCCAGCAACAACTTGAGCAGGGTCAACAGGGTGAGGGCCAGAACTACCGACGAGAAAGGGAGGACCAGCAAAGTCGGGGTCAGAGCCAAATGAACAACCCTTACTACTTCCCCTCGGACATGTTTCAGCAAAAATTCAGGTCTCAAGAAGGTGGGATGTATGTTCTTGAGAGGTTCACCAAGAATGAAAATAAGCTTCTTCGCGGCATTAGGAACTACCGATTAGCCATCTTAGAGGCCAAGCCCAACACTTTCGTCCTTCCACACCATTGTGATGCTGAATCTATTTTCGTTGTTATCAATGGACGTTGCACCTGTACAATGTTGATGCAAGACAACAAAGAGTCGTTCAACATGGAAATGGGTGATGTCCTCAGAGTTCCTGCAGGGGCTACCGTCTACCTTGTTAACAACAACAATGATCAGACTCTAAGAATTGCAAAGCTCAAGCAGCCAGTCAACACTCCTGGACGATTTGAGGAATTCTTCCCTGCAAGTTCTCAAGACCTAGACTCATACTTAAACGTTTTCAGCGGTGACATTCTTGAATCAGCCTTCAATACCCCAAGCGATCAGCTACAGAGGGTGTTTGGACAGCAACAGCAGAAGAGGCAAGGCATGGTGATGAGGGCATCACCACAACAACTCCAGGCATTGAGTCAGCACACTTCTTCACCCAGGAGCAAAGGCCGTCAGTCTGGCAAGGGTCCATTCAATCTTCGAAACCAAAAGCCCATCCAGGCCAACGAGTTCGGCAAATTATTCGAAGCTCGCCCTGAGAAGTTTGATCAGCTCCAGGACATGGATGTCTCAGTCACTTGCGTTGAAGTCAACAATGTAAGTAAATCAGAGAAAGAAAATTATTATTTTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006950 GO:0006952 GO:0008150 GO:0009505 GO:0009605 GO:0009607 GO:0009615 GO:0009620 GO:0009719 GO:0009725 GO:0009735 GO:0010033 GO:0030312 GO:0031410 GO:0031982 GO:0033095 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0097708 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1 Vicilin_N

Protein Analysis

584

Amino Acids

68.38

Weight (kDa)

8.39

Isoelectric Point (pI)

73.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Vicilin_N	PF04702	25 - 142	1.7e-06	Vicilin N terminal region
Cupin_1	PF00190	357 - 443	3.1e-07	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22640
fragaria_vesca	FvH4_2g23190 FvH4_4g15931 FvH4_4g15931
malus_domestica	MD03G1261200.v1.1 MD11G1140200.v1.1 MD11G1281600.v1.1 MD13G1196800.v1.1 MD16G1197100.v1.1 MD16G1197200.v1.1
prunus_persica	Prupe.1G017700_v2.0.a1 Prupe.1G018000_v2.0.a1 Prupe.8G237500_v2.0.a1
pyrus_communis	pycom09g17330 pycom11g24970 pycom13g16920 pycom13g16930 pycom16g16590 pycom16g16620
rosa_chinensis	RchiOBHm_Chr4g0415511 RchiOBHm_Chr6g0290441
rosa_laevigata	RLG00000008067 RLG00000012215
rosa_multiflora	Rmu_sc0002890.1_g000006 Rmu_sc0007265.1_g000001 Rmu_sc0007625.1_g000002 Rmu_sc0020894.1_g000005 Rmu_sc0020894.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359290 Rroxscaffold_7G00177060
rosa_rugosa	Rorug04G0134600 Rorug06G0212700
rosa_samantha	Rh4AG195500 Rh4BG194300 Rh4CG206400 Rh4DG193300 Rh6AG322900 Rh6BG330300 Rh6CG336400 Rh6DG323300
rosa_wichuraiana	Rw4G016650 Rw6G027990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1685
Acc16I	TGCGCA	1 cut(s)	547
AccB1I	GGYRCC	1 cut(s)	879
AccB7I	CCANNNNNTGG	2 cut(s)	94, 1681
AccBSI	CCGCTC	1 cut(s)	175
AccI	GTMKAC	1 cut(s)	1278
AccII	CGCG	3 cut(s)	133, 135, 1083
AciI	CCGC	8 cut(s)	131, 135, 175, 204, 307, 318, 1083, 1413
AclI	AACGTT	1 cut(s)	1404
AclWI	GGATC	6 cut(s)	74, 87, 224, 452, 680, 855
AcoI	YGGCCR	1 cut(s)	283
AcsI	RAATTY	2 cut(s)	1013, 1361
AfaI	GTAC	1 cut(s)	1198
AfiI	CCNNNNNNNGG	2 cut(s)	94, 1681
AflIII	ACRYGT	1 cut(s)	999
AgsI	TTSAA	6 cut(s)	143, 1231, 1427, 1438, 1594, 1706
AjnI	CCWGG	6 cut(s)	117, 1345, 1527, 1556, 1617, 1674
AleI	CACNNNNGTG	1 cut(s)	1149
AluBI	AGCT	8 cut(s)	109, 421, 649, 1075, 1324, 1456, 1649, 1672
AluI	AGCT	8 cut(s)	109, 421, 649, 1075, 1324, 1456, 1649, 1672
Alw21I	GWGCWC	1 cut(s)	781
Alw26I	GTCTC	2 cut(s)	1026, 1693
Alw44I	GTGCAC	1 cut(s)	777
AlwI	GGATC	6 cut(s)	74, 87, 224, 452, 680, 855
Ama87I	CYCGRG	2 cut(s)	422, 650
AoxI	GGCC	8 cut(s)	136, 283, 511, 739, 916, 1116, 1567, 1620
ApaLI	GTGCAC	1 cut(s)	777
ApoI	RAATTY	2 cut(s)	1013, 1361
ArsI	GACNNNNNNTTYG	6 cut(s)	352, 384, 580, 612, 943, 975
AseI	ATTAAT	1 cut(s)	444
AspLEI	GCGC	3 cut(s)	135, 345, 548
AspS9I	GGNCC	3 cut(s)	916, 943, 1586
AsuHPI	GGTGA	7 cut(s)	923, 1048, 1256, 1427, 1506, 1513, 1545
AsuII	TTCGAA	2 cut(s)	1600, 1644
AvaI	CYCGRG	2 cut(s)	422, 650
AvaII	GGWCC	2 cut(s)	943, 1586
BaeGI	GKGCMC	1 cut(s)	781
BamHI	GGATCC	1 cut(s)	79
BanI	GGYRCC	1 cut(s)	879
BauI	CACGAG	2 cut(s)	225, 338
Bbv12I	GWGCWC	1 cut(s)	781
BccI	CCATC	2 cut(s)	1115, 1622
BceAI	ACGGC	4 cut(s)	298, 519, 750, 1554
BcgI	CGANNNNNNTGC	2 cut(s)	1624, 1658
BciT130I	CCWGG	6 cut(s)	119, 1347, 1529, 1558, 1619, 1676
BclI	TGATCA	2 cut(s)	1300, 1666
BcoDI	GTCTC	2 cut(s)	1026, 1693
BfaI	CTAG	3 cut(s)	437, 665, 1388
BfmI	CTRYAG	2 cut(s)	1263, 1457
BfoI	RGCGCY	1 cut(s)	346
Bme1390I	CCNGG	6 cut(s)	119, 1347, 1529, 1558, 1619, 1676
Bme18I	GGWCC	2 cut(s)	943, 1586
BmeT110I	CYCGRG	2 cut(s)	422, 650
BmgT120I	GGNCC	3 cut(s)	916, 943, 1586
BmiI	GGNNCC	3 cut(s)	81, 881, 1587
BmrFI	CCNGG	6 cut(s)	119, 1347, 1529, 1558, 1619, 1676
BmsI	GCATC	8 cut(s)	104, 117, 168, 363, 591, 1144, 1197, 1520
BoxI	GACNNNNGTC	2 cut(s)	384, 612
BpmI	CTGGAG	2 cut(s)	1511, 1658
Bpu10I	CCTNAGC	1 cut(s)	234
Bpu14I	TTCGAA	2 cut(s)	1600, 1644
BpuEI	CTTGAG	7 cut(s)	494, 722, 914, 1008, 1067, 1310, 1365
BsaI	GGTCTC	1 cut(s)	1026
BsaJI	CCNNGG	2 cut(s)	993, 1556
BsaXI	ACNNNNNCTCC	2 cut(s)	1509, 1539
Bsc4I	CCNNNNNNNGG	2 cut(s)	94, 1681
Bse1I	ACTGG	2 cut(s)	268, 1334
Bse3DI	GCAATG	4 cut(s)	107, 308, 485, 779
BseBI	CCWGG	6 cut(s)	119, 1347, 1529, 1558, 1619, 1676
BseDI	CCNNGG	2 cut(s)	993, 1556
BseGI	GGATG	4 cut(s)	183, 1041, 1614, 1690
BseLI	CCNNNNNNNGG	2 cut(s)	94, 1681
BseMI	GCAATG	4 cut(s)	107, 308, 485, 779
BseMII	CTCAG	4 cut(s)	225, 1267, 1647, 1704
BseNI	ACTGG	2 cut(s)	268, 1334
BseRI	GAGGAG	2 cut(s)	29, 137
BseSI	GKGCMC	1 cut(s)	781
BseYI	CCCAGC	1 cut(s)	87
Bsh1236I	CGCG	3 cut(s)	133, 135, 1083
BshFI	GGCC	8 cut(s)	138, 285, 513, 741, 918, 1118, 1569, 1622
BshNI	GGYRCC	1 cut(s)	879
BsiHKAI	GWGCWC	1 cut(s)	781
BsiHKCI	CYCGRG	2 cut(s)	422, 650
BslI	CCNNNNNNNGG	2 cut(s)	94, 1681
BsmAI	GTCTC	2 cut(s)	1026, 1693
BsmI	GAATGC	1 cut(s)	170
BsnI	GGCC	8 cut(s)	138, 285, 513, 741, 918, 1118, 1569, 1622
Bso31I	GGTCTC	1 cut(s)	1026
BsoBI	CYCGRG	2 cut(s)	422, 650
Bsp119I	TTCGAA	2 cut(s)	1600, 1644
Bsp1286I	GDGCHC	1 cut(s)	781
Bsp1407I	TGTACA	1 cut(s)	1196
Bsp143I	GATC	8 cut(s)	79, 229, 457, 685, 847, 1300, 1450, 1666
BspACI	CCGC	8 cut(s)	131, 135, 175, 204, 307, 318, 1083, 1413
BspANI	GGCC	8 cut(s)	138, 285, 513, 741, 918, 1118, 1569, 1622
BspCNI	CTCAG	4 cut(s)	226, 1266, 1648, 1703
BspFNI	CGCG	3 cut(s)	133, 135, 1083
BspHI	TCATGA	1 cut(s)	73
BspLI	GGNNCC	3 cut(s)	81, 881, 1587
BspMAI	CTGCAG	1 cut(s)	1267
BspPI	GGATC	6 cut(s)	74, 87, 224, 452, 680, 855
BspT104I	TTCGAA	2 cut(s)	1600, 1644
BspT107I	GGYRCC	1 cut(s)	879
BspTNI	GGTCTC	1 cut(s)	1026
BsrBI	CCGCTC	1 cut(s)	175
BsrDI	GCAATG	4 cut(s)	107, 308, 485, 779
BsrGI	TGTACA	1 cut(s)	1196
BsrI	ACTGG	2 cut(s)	268, 1334
BssECI	CCNNGG	2 cut(s)	993, 1556
BssMI	GATC	8 cut(s)	79, 229, 457, 685, 847, 1300, 1450, 1666
BssSI	CACGAG	2 cut(s)	225, 338
Bst2BI	CACGAG	2 cut(s)	225, 338
Bst2UI	CCWGG	6 cut(s)	119, 1347, 1529, 1558, 1619, 1676
Bst4CI	ACNGT	6 cut(s)	383, 396, 611, 624, 867, 1276
Bst6I	CTCTTC	2 cut(s)	39, 1481
BstAUI	TGTACA	1 cut(s)	1196
BstBI	TTCGAA	2 cut(s)	1600, 1644
BstDEI	CTNAG	6 cut(s)	234, 1111, 1253, 1310, 1656, 1690
BstF5I	GGATG	4 cut(s)	183, 1041, 1614, 1690
BstFNI	CGCG	3 cut(s)	133, 135, 1083
BstH2I	RGCGCY	1 cut(s)	346
BstHHI	GCGC	3 cut(s)	135, 345, 548
BstKTI	GATC	8 cut(s)	82, 232, 460, 688, 850, 1303, 1453, 1669
BstMAI	GTCTC	2 cut(s)	1026, 1693
BstMBI	GATC	8 cut(s)	79, 229, 457, 685, 847, 1300, 1450, 1666
BstNI	CCWGG	6 cut(s)	119, 1347, 1529, 1558, 1619, 1676
BstNSI	RCATGY	3 cut(s)	415, 643, 1003
BstPAI	GACNNNNGTC	2 cut(s)	384, 612
BstSCI	CCNGG	6 cut(s)	117, 1345, 1527, 1556, 1617, 1674
BstSFI	CTRYAG	2 cut(s)	1263, 1457
BstSLI	GKGCMC	1 cut(s)	781
BstUI	CGCG	3 cut(s)	133, 135, 1083
BstX2I	RGATCY	3 cut(s)	79, 457, 685
BstYI	RGATCY	3 cut(s)	79, 457, 685
BsuRI	GGCC	8 cut(s)	138, 285, 513, 741, 918, 1118, 1569, 1622
BtgZI	GCGATG	1 cut(s)	127
BtsCI	GGATG	4 cut(s)	183, 1041, 1614, 1690
BtsI	GCAGTG	4 cut(s)	158, 257, 536, 767
BtsIMutI	CAGTG	9 cut(s)	158, 257, 388, 401, 536, 616, 629, 767, 872
CciI	TCATGA	1 cut(s)	73
CfoI	GCGC	3 cut(s)	135, 345, 548
Cfr13I	GGNCC	3 cut(s)	916, 943, 1586
CseI	GACGC	2 cut(s)	560, 791
Csp6I	GTAC	1 cut(s)	1197
CviAII	CATG	7 cut(s)	74, 412, 640, 1000, 1234, 1498, 1681
CviQI	GTAC	1 cut(s)	1197
DdeI	CTNAG	6 cut(s)	234, 1111, 1253, 1310, 1656, 1690
DpnI	GATC	8 cut(s)	81, 231, 459, 687, 849, 1302, 1452, 1668
DpnII	GATC	8 cut(s)	79, 229, 457, 685, 847, 1300, 1450, 1666
DrdI	GACNNNNNNGTC	1 cut(s)	1685
DseDI	GACNNNNNNGTC	1 cut(s)	1685
EaeI	YGGCCR	1 cut(s)	283
Eam1104I	CTCTTC	2 cut(s)	39, 1481
EarI	CTCTTC	2 cut(s)	39, 1481
Eco31I	GGTCTC	1 cut(s)	1026
Eco47I	GGWCC	2 cut(s)	943, 1586
Eco88I	CYCGRG	2 cut(s)	422, 650
EcoRI	GAATTC	1 cut(s)	1361
EcoRII	CCWGG	6 cut(s)	117, 1345, 1527, 1556, 1617, 1674
FaeI	CATG	7 cut(s)	77, 415, 643, 1003, 1237, 1501, 1684
FatI	CATG	7 cut(s)	73, 411, 639, 999, 1233, 1497, 1680
FbaI	TGATCA	2 cut(s)	1300, 1666
FblI	GTMKAC	1 cut(s)	1278
FokI	GGATG	4 cut(s)	190, 1048, 1601, 1697
FspAI	RTGCGCAY	1 cut(s)	547
FspBI	CTAG	3 cut(s)	437, 665, 1388
FspI	TGCGCA	1 cut(s)	547
GlaI	GCGC	3 cut(s)	134, 344, 547
GsaI	CCCAGC	1 cut(s)	91
GsuI	CTGGAG	2 cut(s)	1511, 1658
HaeII	RGCGCY	1 cut(s)	346
HaeIII	GGCC	8 cut(s)	138, 285, 513, 741, 918, 1118, 1569, 1622
HgaI	GACGC	2 cut(s)	560, 791
HhaI	GCGC	3 cut(s)	135, 345, 548
Hin1II	CATG	7 cut(s)	77, 415, 643, 1003, 1237, 1501, 1684
Hin6I	GCGC	3 cut(s)	133, 343, 546
HinP1I	GCGC	3 cut(s)	133, 343, 546
HincII	GTYRAC	8 cut(s)	323, 539, 575, 806, 905, 1288, 1339, 1711
HindII	GTYRAC	8 cut(s)	323, 539, 575, 806, 905, 1288, 1339, 1711
HindIII	AAGCTT	1 cut(s)	1073
HinfI	GANTC	6 cut(s)	1160, 1223, 1306, 1391, 1427, 1537
HpaI	GTTAAC	1 cut(s)	1288
HphI	GGTGA	7 cut(s)	923, 1048, 1256, 1427, 1506, 1513, 1545
Hpy188I	TCNGA	7 cut(s)	372, 600, 963, 997, 1256, 1305, 1729
Hpy99I	CGWCG	1 cut(s)	933
HpyAV	CCTTC	7 cut(s)	64, 93, 149, 399, 1022, 1148, 1444
HpyCH4III	ACNGT	6 cut(s)	383, 396, 611, 624, 867, 1276
HpyCH4IV	ACGT	5 cut(s)	364, 592, 841, 1186, 1404
HpyF3I	CTNAG	6 cut(s)	234, 1111, 1253, 1310, 1656, 1690
HpySE526I	ACGT	5 cut(s)	364, 592, 841, 1186, 1404
Hsp92II	CATG	7 cut(s)	77, 415, 643, 1003, 1237, 1501, 1684
HspAI	GCGC	3 cut(s)	133, 343, 546
Ksp22I	TGATCA	2 cut(s)	1300, 1666
KspAI	GTTAAC	1 cut(s)	1288
Kzo9I	GATC	8 cut(s)	79, 229, 457, 685, 847, 1300, 1450, 1666
LmnI	GCTCC	3 cut(s)	97, 1560, 1677
LweI	GCATC	8 cut(s)	104, 117, 168, 363, 591, 1144, 1197, 1520
MaeI	CTAG	3 cut(s)	437, 665, 1388
MaeII	ACGT	5 cut(s)	364, 592, 841, 1186, 1404
MaeIII	GTNAC	2 cut(s)	1415, 1693
MalI	GATC	8 cut(s)	81, 231, 459, 687, 849, 1302, 1452, 1668
MbiI	CCGCTC	1 cut(s)	175
MboI	GATC	8 cut(s)	79, 229, 457, 685, 847, 1300, 1450, 1666
MboII	GAAGA	6 cut(s)	26, 1070, 1357, 1498, 1542, 1589
MfeI	CAATTG	2 cut(s)	554, 785
MflI	RGATCY	3 cut(s)	79, 457, 685
MhlI	GDGCHC	1 cut(s)	781
MluCI	AATT	7 cut(s)	554, 785, 1013, 1314, 1361, 1637, 1738
MlyI	GAGTC	4 cut(s)	1232, 1300, 1385, 1546
MmeI	TCCRAC	1 cut(s)	75
MseI	TTAA	4 cut(s)	444, 672, 1287, 1400
MslI	CAYNNNNRTG	4 cut(s)	1149, 1152, 1238, 1502
MspA1I	CMGCKG	2 cut(s)	109, 1413
MspR9I	CCNGG	6 cut(s)	119, 1347, 1529, 1558, 1619, 1676
MunI	CAATTG	2 cut(s)	554, 785
Mva1269I	GAATGC	1 cut(s)	170
MvaI	CCWGG	6 cut(s)	119, 1347, 1529, 1558, 1619, 1676
MvnI	CGCG	3 cut(s)	133, 135, 1083
NdeII	GATC	8 cut(s)	79, 229, 457, 685, 847, 1300, 1450, 1666
NlaIII	CATG	7 cut(s)	77, 415, 643, 1003, 1237, 1501, 1684
NlaIV	GGNNCC	3 cut(s)	81, 881, 1587
NmuCI	GTSAC	2 cut(s)	1415, 1693
NsbI	TGCGCA	1 cut(s)	547
NspI	RCATGY	3 cut(s)	415, 643, 1003
NspV	TTCGAA	2 cut(s)	1600, 1644
OliI	CACNNNNGTG	1 cut(s)	1149
PaeI	GCATGC	2 cut(s)	415, 643
PaeR7I	CTCGAG	2 cut(s)	422, 650
PagI	TCATGA	1 cut(s)	73
PciI	ACATGT	1 cut(s)	999
PctI	GAATGC	1 cut(s)	170
PfeI	GAWTC	2 cut(s)	1160, 1427
PflFI	GACNNNGTC	2 cut(s)	366, 594
PflMI	CCANNNNNTGG	2 cut(s)	94, 1681
PfoI	TCCNGGA	2 cut(s)	1345, 1674
PleI	GAGTC	4 cut(s)	1231, 1300, 1385, 1545
PpsI	GAGTC	4 cut(s)	1231, 1300, 1385, 1545
PscI	ACATGT	1 cut(s)	999
PshAI	GACNNNNGTC	2 cut(s)	384, 612
PshBI	ATTAAT	1 cut(s)	444
Psp1406I	AACGTT	1 cut(s)	1404
Psp6I	CCWGG	6 cut(s)	117, 1345, 1527, 1556, 1617, 1674
PspFI	CCCAGC	1 cut(s)	87
PspGI	CCWGG	6 cut(s)	117, 1345, 1527, 1556, 1617, 1674
PspN4I	GGNNCC	3 cut(s)	81, 881, 1587
PspPI	GGNCC	3 cut(s)	916, 943, 1586
PspXI	VCTCGAGB	2 cut(s)	422, 650
PsrI	GAACNNNNNNTAC	2 cut(s)	965, 997
PstI	CTGCAG	1 cut(s)	1267
PsuI	RGATCY	3 cut(s)	79, 457, 685
PsyI	GACNNNGTC	2 cut(s)	366, 594
PvuII	CAGCTG	1 cut(s)	109
RsaI	GTAC	1 cut(s)	1198
RsaNI	GTAC	1 cut(s)	1197
RseI	CAYNNNNRTG	4 cut(s)	1149, 1152, 1238, 1502
SaqAI	TTAA	4 cut(s)	444, 672, 1287, 1400
Sau3AI	GATC	8 cut(s)	79, 229, 457, 685, 847, 1300, 1450, 1666
Sau96I	GGNCC	3 cut(s)	916, 943, 1586
SbfI	CCTGCAGG	1 cut(s)	1267
SchI	GAGTC	4 cut(s)	1232, 1300, 1385, 1546
ScrFI	CCNGG	6 cut(s)	119, 1347, 1529, 1558, 1619, 1676
SdaI	CCTGCAGG	1 cut(s)	1267
SduI	GDGCHC	1 cut(s)	781
SfaNI	GCATC	8 cut(s)	104, 117, 168, 363, 591, 1144, 1197, 1520
SfcI	CTRYAG	2 cut(s)	1263, 1457
Sfr274I	CTCGAG	2 cut(s)	422, 650
SfuI	TTCGAA	2 cut(s)	1600, 1644
SinI	GGWCC	2 cut(s)	943, 1586
SlaI	CTCGAG	2 cut(s)	422, 650
SmiMI	CAYNNNNRTG	4 cut(s)	1149, 1152, 1238, 1502
SmlI	CTYRAG	9 cut(s)	422, 473, 650, 701, 893, 1023, 1046, 1325, 1380
SmoI	CTYRAG	9 cut(s)	422, 473, 650, 701, 893, 1023, 1046, 1325, 1380
SphI	GCATGC	2 cut(s)	415, 643
Sse8387I	CCTGCAGG	1 cut(s)	1267
Sse9I	AATT	7 cut(s)	554, 785, 1013, 1314, 1361, 1637, 1738
SsiI	CCGC	8 cut(s)	131, 135, 175, 204, 307, 318, 1083, 1413
SspMI	CTAG	3 cut(s)	437, 665, 1388
StyD4I	CCNGG	6 cut(s)	117, 1345, 1527, 1556, 1617, 1674
TaaI	ACNGT	6 cut(s)	383, 396, 611, 624, 867, 1276
TaiI	ACGT	5 cut(s)	367, 595, 844, 1189, 1407
TaqI	TCGA	6 cut(s)	272, 423, 500, 651, 1600, 1644
TasI	AATT	7 cut(s)	554, 785, 1013, 1314, 1361, 1637, 1738
TatI	WGTACW	1 cut(s)	1196
TauI	GCSGC	4 cut(s)	133, 138, 309, 1086
TfiI	GAWTC	2 cut(s)	1160, 1427
Tru1I	TTAA	4 cut(s)	444, 672, 1287, 1400
Tru9I	TTAA	4 cut(s)	444, 672, 1287, 1400
TscAI	CASTG	9 cut(s)	158, 257, 388, 401, 536, 616, 629, 767, 872
TseFI	GTSAC	2 cut(s)	1415, 1693
Tsp45I	GTSAC	2 cut(s)	1415, 1693
TspDTI	ATGAA	2 cut(s)	986, 1080
TspRI	CASTG	9 cut(s)	158, 257, 388, 401, 536, 616, 629, 767, 872
Tth111I	GACNNNGTC	2 cut(s)	366, 594
Van91I	CCANNNNNTGG	2 cut(s)	94, 1681
VneI	GTGCAC	1 cut(s)	777
VpaK11BI	GGWCC	2 cut(s)	943, 1586
VspI	ATTAAT	1 cut(s)	444
XapI	RAATTY	2 cut(s)	1013, 1361
XceI	RCATGY	3 cut(s)	415, 643, 1003
XhoI	CTCGAG	2 cut(s)	422, 650
XmiI	GTMKAC	1 cut(s)	1278
XspI	CTAG	3 cut(s)	437, 665, 1388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.