Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0002332

Physical Location & Seq

Genomic Coordinates Forward (+)

47968151 .. 47972079

Gene Structure 3929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG195500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGGCGATACTCAAAACTTTTTTCCTAATTTCCACTCTTCTCCTCGCCTCAATCTCCTTCTCTCTTGCTTATCATCATGAGGATCCTTCCCAGCAGTTGGAGCAATGCCAGAGGCGATGCCAGGAGGAGATGCCGCGCGGCCTTCAACAGCAGCAGTGCCAGCAAGAATGCAGAGAGCGGATGCAGCAGCAGGGAGGCCGCGGTGGCGGTAGCAGAACCCCGTTCTCTCGTGATCCTGAGCAGAAGTTTGAGCAGTGCGTGGAGAGTTGCCAGTCGAGGCAACACGGCCAGCAACAGCAGCAGCAATGCCGCCAACATTGCGGTCAACAAATGAGCCAGCAGGAGCGCCAACAAATGTGCCAGCAGCGCTGTCAAAGGCAGCAACGTGGGGATTGGCAACAGCAGCAACACTGCCAAAGAAGGTGCGAGAGCCAATTTGAACAGCAACTGGAAGAACAAGACATTAACACATCAAGAGAAACGGAACAGCAATTTGAGGAGTGCCAGCAGAGCTGTCAATCCAGACAACACGGTCGCCAACAACAGCAACAATGTAGCCAGAAATGCGCTCAACAAACTTGCCAGCAGCATTGTCAGAGGCAACAAAGGGGGGATTGGCGCCAACAGCAACAGTGCCAACAGAGGTGTGAGAGGCAATTTGAACAGCGAGGAGACGAACTAGACATTAACACATCAAGAGATCCCGAACAAAAACTTGAGCAATGCCAACAGAGTTGCCAATCGAGGCAACAAGGCCAACAACAGCAGCAGCAGTGCCGTCAACAATGCGCACAGCAATTGAGCCAGCAAGAGCGTCAACAAATCTGCCAAAGACGGTGTCAGATGCAAGACAGTGATCAGCAACAGTGCCAAAGAAGGTGCATGCAGCAGCTCGAGCAAGGAGAACAAGACATTAATACATCAACAGATCCCGAACAAAAACTTGAGCAATGTCAACAGGGTTGCCAATCAAGGGAACAAGGCCAACAAGAGCAGCAGCAGCAGTGCCGTCAGCAATGTGCACAGCAATTGAGCCAGCGAGAGCGTCAACAAATCTGCGAGCAACGCTGCCAGAGGCAACAACGTGGGGATCAACAACAGCAACAACAGTGCCAAAGAAGGTGCCAGCAACAACTTGAGCAGGGTCAATACGGTCAGGGCCAGAACTATCGACGAGAAAGGGAGGACCAGCAAAGTCGGGATCAGAGCCAAATGAACAACCCTTACTACTTTCCCTCGGACATGTTTCAGCAAAAATTCAGGTCTCAAGAAGGTGGGATGTATGTTCTTGAGAGGTTTACCAAGAATGAAAATAAGCTTCTTCGCGGCATTAGGAACTACCGATTAGCCATCATCGAGGCCAAGCCCAACACTTTCGTCCTCCCACACCATTGTGATGCTGAATCTATTTTCGTTGTTATCAATGGACGTTGCACCTGTACAATGTTGATGCAAGACAACAAAGAGTCGTTCAACATGGAAATGGGTGATGTCCTCAGAGTTCCTGCAGGGGCTACCGTCTACCTTGTTAACAACAACAATGATCAGACTCTAAGAATTGCAAAGCTCAAGCAGCCAGTCAACACTCCTGGACGATTTGAGGAATTCTTCCCTGCAAGTTCTCAAGACCTAGACTCATACTTAAACGTTTTCAGCGATGACATTCTTGAATCAGCCTTCAATGTAAGTTTCAGTTCTTATTTTTCATTAACTTGGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006950 GO:0006952 GO:0008150 GO:0009505 GO:0009605 GO:0009607 GO:0009615 GO:0009620 GO:0009719 GO:0009725 GO:0009735 GO:0010033 GO:0030312 GO:0031410 GO:0031982 GO:0033095 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0097708 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1 Vicilin_N

Protein Analysis

573

Amino Acids

68.37

Weight (kDa)

6.54

Isoelectric Point (pI)

79.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	440 - 562	1e-07	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22640
fragaria_vesca	FvH4_2g23190 FvH4_4g15931 FvH4_4g15931
malus_domestica	MD03G1261200.v1.1 MD11G1140200.v1.1 MD11G1281600.v1.1 MD13G1196800.v1.1 MD16G1197100.v1.1 MD16G1197200.v1.1
prunus_persica	Prupe.1G017700_v2.0.a1 Prupe.1G018000_v2.0.a1 Prupe.8G237500_v2.0.a1
pyrus_communis	pycom09g17330 pycom11g24970 pycom13g16920 pycom13g16930 pycom16g16590 pycom16g16620
rosa_chinensis	RchiOBHm_Chr4g0415511 RchiOBHm_Chr6g0290441
rosa_laevigata	RLG00000008067 RLG00000012215
rosa_multiflora	Rmu_sc0002890.1_g000006 Rmu_sc0007265.1_g000001 Rmu_sc0007625.1_g000002 Rmu_sc0020894.1_g000005 Rmu_sc0020894.1_g000006
rosa_roxburghii	Rroxscaffold_5G00359290 Rroxscaffold_7G00177060
rosa_rugosa	Rorug04G0134600 Rorug06G0212700
rosa_samantha	Rh4AG195500 Rh4BG194300 Rh4CG206400 Rh4DG193300 Rh6AG322900 Rh6BG330300 Rh6CG336400 Rh6DG323300
rosa_wichuraiana	Rw4G016650 Rw6G027990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	531
Acc16I	TGCGCA	1 cut(s)	790
AccB1I	GGYRCC	2 cut(s)	618, 1122
AccB7I	CCANNNNNTGG	1 cut(s)	97
AccBSI	CCGCTC	1 cut(s)	178
AccI	GTMKAC	1 cut(s)	1521
AccII	CGCG	4 cut(s)	136, 138, 201, 1326
AciI	CCGC	9 cut(s)	134, 138, 178, 199, 201, 207, 310, 321, 1326
AclI	AACGTT	1 cut(s)	1647
AclWI	GGATC	7 cut(s)	77, 90, 227, 695, 923, 1098, 1209
AcoI	YGGCCR	1 cut(s)	286
AcsI	RAATTY	2 cut(s)	1256, 1604
AcyI	GRCGYC	1 cut(s)	619
AfaI	GTAC	2 cut(s)	1441, 1718
AfeI	AGCGCT	1 cut(s)	368
AfiI	CCNNNNNNNGG	2 cut(s)	97, 973
AflIII	ACRYGT	1 cut(s)	1242
AgsI	TTSAA	6 cut(s)	146, 440, 662, 1474, 1670, 1681
AjnI	CCWGG	2 cut(s)	120, 1588
AleI	CACNNNNGTG	1 cut(s)	1392
AluBI	AGCT	4 cut(s)	513, 892, 1318, 1567
AluI	AGCT	4 cut(s)	513, 892, 1318, 1567
Alw21I	GWGCWC	1 cut(s)	1024
Alw26I	GTCTC	2 cut(s)	666, 1269
Alw44I	GTGCAC	1 cut(s)	1020
AlwI	GGATC	7 cut(s)	77, 90, 227, 695, 923, 1098, 1209
AlwNI	CAGNNNCTG	1 cut(s)	448
Ama87I	CYCGRG	1 cut(s)	893
Aor51HI	AGCGCT	1 cut(s)	368
AoxI	GGCC	7 cut(s)	139, 196, 286, 754, 982, 1159, 1359
ApaLI	GTGCAC	1 cut(s)	1020
ApoI	RAATTY	2 cut(s)	1256, 1604
ArsI	GACNNNNNNTTYG	2 cut(s)	823, 855
AseI	ATTAAT	1 cut(s)	915
AspLEI	GCGC	6 cut(s)	138, 348, 369, 569, 621, 791
AspS9I	GGNCC	2 cut(s)	1159, 1186
AsuHPI	GGTGA	1 cut(s)	1499
AvaI	CYCGRG	1 cut(s)	893
AvaII	GGWCC	1 cut(s)	1186
BaeGI	GKGCMC	1 cut(s)	1024
BamHI	GGATCC	1 cut(s)	82
BanI	GGYRCC	2 cut(s)	618, 1122
BauI	CACGAG	1 cut(s)	228
Bbv12I	GWGCWC	1 cut(s)	1024
BccI	CCATC	1 cut(s)	1358
BceAI	ACGGC	3 cut(s)	301, 762, 993
BciT130I	CCWGG	2 cut(s)	122, 1590
BclI	TGATCA	2 cut(s)	856, 1543
BcoDI	GTCTC	2 cut(s)	666, 1269
BfaI	CTAG	2 cut(s)	680, 1631
BfmI	CTRYAG	1 cut(s)	1506
BfoI	RGCGCY	3 cut(s)	349, 370, 622
BglI	GCCNNNNNGGC	1 cut(s)	204
Bme1390I	CCNGG	2 cut(s)	122, 1590
Bme18I	GGWCC	1 cut(s)	1186
BmeT110I	CYCGRG	1 cut(s)	893
BmgT120I	GGNCC	2 cut(s)	1159, 1186
BmiI	GGNNCC	3 cut(s)	84, 620, 1124
BmrFI	CCNGG	2 cut(s)	122, 1590
BmsI	GCATC	6 cut(s)	107, 120, 171, 834, 1387, 1440
Bpu10I	CCTNAGC	1 cut(s)	237
BpuEI	CTTGAG	7 cut(s)	737, 965, 1157, 1251, 1310, 1553, 1608
BsaHI	GRCGYC	1 cut(s)	619
BsaI	GGTCTC	1 cut(s)	1269
BsaJI	CCNNGG	2 cut(s)	199, 1236
Bsc4I	CCNNNNNNNGG	2 cut(s)	97, 973
Bse1I	ACTGG	3 cut(s)	271, 453, 1577
Bse3DI	GCAATG	6 cut(s)	110, 311, 316, 728, 956, 1022
BseBI	CCWGG	2 cut(s)	122, 1590
BseDI	CCNNGG	2 cut(s)	199, 1236
BseGI	GGATG	2 cut(s)	186, 1284
BseLI	CCNNNNNNNGG	2 cut(s)	97, 973
BseMI	GCAATG	6 cut(s)	110, 311, 316, 728, 956, 1022
BseMII	CTCAG	2 cut(s)	228, 1510
BseNI	ACTGG	3 cut(s)	271, 453, 1577
BseRI	GAGGAG	4 cut(s)	32, 140, 512, 684
BseSI	GKGCMC	1 cut(s)	1024
BseYI	CCCAGC	1 cut(s)	90
Bsh1236I	CGCG	4 cut(s)	136, 138, 201, 1326
Bsh1285I	CGRYCG	1 cut(s)	535
BshFI	GGCC	7 cut(s)	141, 198, 288, 756, 984, 1161, 1361
BshNI	GGYRCC	2 cut(s)	618, 1122
BsiEI	CGRYCG	1 cut(s)	535
BsiHKAI	GWGCWC	1 cut(s)	1024
BsiHKCI	CYCGRG	1 cut(s)	893
BslI	CCNNNNNNNGG	2 cut(s)	97, 973
BsmAI	GTCTC	2 cut(s)	666, 1269
BsmBI	CGTCTC	1 cut(s)	666
BsmI	GAATGC	1 cut(s)	173
BsnI	GGCC	7 cut(s)	141, 198, 288, 756, 984, 1161, 1361
Bso31I	GGTCTC	1 cut(s)	1269
BsoBI	CYCGRG	1 cut(s)	893
Bsp1286I	GDGCHC	1 cut(s)	1024
Bsp1407I	TGTACA	1 cut(s)	1439
Bsp143I	GATC	8 cut(s)	82, 232, 700, 856, 928, 1090, 1201, 1543
BspACI	CCGC	9 cut(s)	134, 138, 178, 199, 201, 207, 310, 321, 1326
BspANI	GGCC	7 cut(s)	141, 198, 288, 756, 984, 1161, 1361
BspCNI	CTCAG	2 cut(s)	229, 1509
BspFNI	CGCG	4 cut(s)	136, 138, 201, 1326
BspHI	TCATGA	1 cut(s)	76
BspLI	GGNNCC	3 cut(s)	84, 620, 1124
BspMAI	CTGCAG	1 cut(s)	1510
BspPI	GGATC	7 cut(s)	77, 90, 227, 695, 923, 1098, 1209
BspT107I	GGYRCC	2 cut(s)	618, 1122
BspTNI	GGTCTC	1 cut(s)	1269
BsrBI	CCGCTC	1 cut(s)	178
BsrDI	GCAATG	6 cut(s)	110, 311, 316, 728, 956, 1022
BsrGI	TGTACA	1 cut(s)	1439
BsrI	ACTGG	3 cut(s)	271, 453, 1577
BssECI	CCNNGG	2 cut(s)	199, 1236
BssMI	GATC	8 cut(s)	82, 232, 700, 856, 928, 1090, 1201, 1543
BssNI	GRCGYC	1 cut(s)	619
BssSI	CACGAG	1 cut(s)	228
Bst2BI	CACGAG	1 cut(s)	228
Bst2UI	CCWGG	2 cut(s)	122, 1590
Bst4CI	ACNGT	8 cut(s)	533, 633, 837, 854, 867, 1110, 1154, 1519
Bst6I	CTCTTC	1 cut(s)	42
BstACI	GRCGYC	1 cut(s)	619
BstAUI	TGTACA	1 cut(s)	1439
BstDEI	CTNAG	3 cut(s)	237, 1496, 1553
BstDSI	CCRYGG	1 cut(s)	199
BstF5I	GGATG	2 cut(s)	186, 1284
BstFNI	CGCG	4 cut(s)	136, 138, 201, 1326
BstH2I	RGCGCY	3 cut(s)	349, 370, 622
BstHHI	GCGC	6 cut(s)	138, 348, 369, 569, 621, 791
BstKTI	GATC	8 cut(s)	85, 235, 703, 859, 931, 1093, 1204, 1546
BstMAI	GTCTC	2 cut(s)	666, 1269
BstMBI	GATC	8 cut(s)	82, 232, 700, 856, 928, 1090, 1201, 1543
BstMCI	CGRYCG	1 cut(s)	535
BstNI	CCWGG	2 cut(s)	122, 1590
BstNSI	RCATGY	2 cut(s)	886, 1246
BstSCI	CCNGG	2 cut(s)	120, 1588
BstSFI	CTRYAG	1 cut(s)	1506
BstSLI	GKGCMC	1 cut(s)	1024
BstUI	CGCG	4 cut(s)	136, 138, 201, 1326
BstX2I	RGATCY	3 cut(s)	82, 700, 928
BstYI	RGATCY	3 cut(s)	82, 700, 928
BsuRI	GGCC	7 cut(s)	141, 198, 288, 756, 984, 1161, 1361
BtgI	CCRYGG	1 cut(s)	199
BtgZI	GCGATG	2 cut(s)	130, 1671
BtsCI	GGATG	2 cut(s)	186, 1284
BtsI	GCAGTG	5 cut(s)	161, 260, 409, 779, 1010
BtsIMutI	CAGTG	9 cut(s)	161, 260, 409, 638, 779, 859, 872, 1010, 1115
CaiI	CAGNNNCTG	1 cut(s)	448
CciI	TCATGA	1 cut(s)	76
CfoI	GCGC	6 cut(s)	138, 348, 369, 569, 621, 791
Cfr13I	GGNCC	2 cut(s)	1159, 1186
Cfr42I	CCGCGG	1 cut(s)	202
CseI	GACGC	2 cut(s)	803, 1034
Csp6I	GTAC	2 cut(s)	1440, 1717
CviAII	CATG	4 cut(s)	77, 883, 1243, 1477
CviQI	GTAC	2 cut(s)	1440, 1717
DdeI	CTNAG	3 cut(s)	237, 1496, 1553
DinI	GGCGCC	1 cut(s)	620
DpnI	GATC	8 cut(s)	84, 234, 702, 858, 930, 1092, 1203, 1545
DpnII	GATC	8 cut(s)	82, 232, 700, 856, 928, 1090, 1201, 1543
DrdI	GACNNNNNNGTC	1 cut(s)	531
DseDI	GACNNNNNNGTC	1 cut(s)	531
EaeI	YGGCCR	1 cut(s)	286
Eam1104I	CTCTTC	1 cut(s)	42
EarI	CTCTTC	1 cut(s)	42
Eco31I	GGTCTC	1 cut(s)	1269
Eco47I	GGWCC	1 cut(s)	1186
Eco47III	AGCGCT	1 cut(s)	368
Eco88I	CYCGRG	1 cut(s)	893
EcoRI	GAATTC	1 cut(s)	1604
EcoRII	CCWGG	2 cut(s)	120, 1588
EgeI	GGCGCC	1 cut(s)	620
EheI	GGCGCC	1 cut(s)	620
Esp3I	CGTCTC	1 cut(s)	666
FaeI	CATG	4 cut(s)	80, 886, 1246, 1480
FaiI	YATR	6 cut(s)	78, 884, 1244, 1284, 1478, 1639
FatI	CATG	4 cut(s)	76, 882, 1242, 1476
FbaI	TGATCA	2 cut(s)	856, 1543
FblI	GTMKAC	1 cut(s)	1521
FokI	GGATG	2 cut(s)	193, 1291
FspAI	RTGCGCAY	1 cut(s)	790
FspBI	CTAG	2 cut(s)	680, 1631
FspI	TGCGCA	1 cut(s)	790
GlaI	GCGC	6 cut(s)	137, 347, 368, 568, 620, 790
GsaI	CCCAGC	1 cut(s)	94
HaeII	RGCGCY	3 cut(s)	349, 370, 622
HaeIII	GGCC	7 cut(s)	141, 198, 288, 756, 984, 1161, 1361
HgaI	GACGC	2 cut(s)	803, 1034
HhaI	GCGC	6 cut(s)	138, 348, 369, 569, 621, 791
Hin1I	GRCGYC	1 cut(s)	619
Hin1II	CATG	4 cut(s)	80, 886, 1246, 1480
Hin6I	GCGC	6 cut(s)	136, 346, 367, 567, 619, 789
HinP1I	GCGC	6 cut(s)	136, 346, 367, 567, 619, 789
HincII	GTYRAC	7 cut(s)	326, 782, 818, 956, 1049, 1531, 1582
HindII	GTYRAC	7 cut(s)	326, 782, 818, 956, 1049, 1531, 1582
HindIII	AAGCTT	1 cut(s)	1316
HinfI	GANTC	5 cut(s)	1403, 1466, 1549, 1634, 1670
HpaI	GTTAAC	1 cut(s)	1531
HphI	GGTGA	1 cut(s)	1499
Hpy188I	TCNGA	6 cut(s)	597, 843, 1206, 1240, 1499, 1548
Hpy99I	CGWCG	1 cut(s)	1176
HpyAV	CCTTC	8 cut(s)	67, 96, 152, 414, 870, 1113, 1265, 1687
HpyCH4III	ACNGT	8 cut(s)	533, 633, 837, 854, 867, 1110, 1154, 1519
HpyCH4IV	ACGT	4 cut(s)	385, 1084, 1429, 1647
HpyF3I	CTNAG	3 cut(s)	237, 1496, 1553
HpySE526I	ACGT	4 cut(s)	385, 1084, 1429, 1647
Hsp92I	GRCGYC	1 cut(s)	619
Hsp92II	CATG	4 cut(s)	80, 886, 1246, 1480
HspAI	GCGC	6 cut(s)	136, 346, 367, 567, 619, 789
KasI	GGCGCC	1 cut(s)	618
Ksp22I	TGATCA	2 cut(s)	856, 1543
KspAI	GTTAAC	1 cut(s)	1531
KspI	CCGCGG	1 cut(s)	202
Kzo9I	GATC	8 cut(s)	82, 232, 700, 856, 928, 1090, 1201, 1543
LmnI	GCTCC	2 cut(s)	100, 343
LweI	GCATC	6 cut(s)	107, 120, 171, 834, 1387, 1440
MaeI	CTAG	2 cut(s)	680, 1631
MaeII	ACGT	4 cut(s)	385, 1084, 1429, 1647
MalI	GATC	8 cut(s)	84, 234, 702, 858, 930, 1092, 1203, 1545
MbiI	CCGCTC	1 cut(s)	178
MboI	GATC	8 cut(s)	82, 232, 700, 856, 928, 1090, 1201, 1543
MboII	GAAGA	4 cut(s)	29, 464, 1313, 1600
MfeI	CAATTG	2 cut(s)	797, 1028
MflI	RGATCY	3 cut(s)	82, 700, 928
MhlI	GDGCHC	1 cut(s)	1024
MluCI	AATT	9 cut(s)	27, 434, 491, 656, 797, 1028, 1256, 1557, 1604
Mly113I	GGCGCC	1 cut(s)	619
MlyI	GAGTC	3 cut(s)	1475, 1543, 1628
MmeI	TCCRAC	1 cut(s)	78
MseI	TTAA	6 cut(s)	465, 687, 915, 1530, 1643, 1709
MslI	CAYNNNNRTG	3 cut(s)	1392, 1395, 1481
MspA1I	CMGCKG	1 cut(s)	201
MspR9I	CCNGG	2 cut(s)	122, 1590
MunI	CAATTG	2 cut(s)	797, 1028
Mva1269I	GAATGC	1 cut(s)	173
MvaI	CCWGG	2 cut(s)	122, 1590
MvnI	CGCG	4 cut(s)	136, 138, 201, 1326
NarI	GGCGCC	1 cut(s)	619
NdeII	GATC	8 cut(s)	82, 232, 700, 856, 928, 1090, 1201, 1543
NlaIII	CATG	4 cut(s)	80, 886, 1246, 1480
NlaIV	GGNNCC	3 cut(s)	84, 620, 1124
NsbI	TGCGCA	1 cut(s)	790
NspI	RCATGY	2 cut(s)	886, 1246
OliI	CACNNNNGTG	1 cut(s)	1392
PaeI	GCATGC	1 cut(s)	886
PaeR7I	CTCGAG	1 cut(s)	893
PagI	TCATGA	1 cut(s)	76
PciI	ACATGT	1 cut(s)	1242
PcsI	WCGNNNNNNNCGW	1 cut(s)	1653
PctI	GAATGC	1 cut(s)	173
PfeI	GAWTC	2 cut(s)	1403, 1670
PflFI	GACNNNGTC	1 cut(s)	837
PflMI	CCANNNNNTGG	1 cut(s)	97
PfoI	TCCNGGA	1 cut(s)	1588
PleI	GAGTC	3 cut(s)	1474, 1543, 1628
PluTI	GGCGCC	1 cut(s)	622
PpsI	GAGTC	3 cut(s)	1474, 1543, 1628
PscI	ACATGT	1 cut(s)	1242
PshBI	ATTAAT	1 cut(s)	915
Psp1406I	AACGTT	1 cut(s)	1647
Psp6I	CCWGG	2 cut(s)	120, 1588
PspFI	CCCAGC	1 cut(s)	90
PspGI	CCWGG	2 cut(s)	120, 1588
PspN4I	GGNNCC	3 cut(s)	84, 620, 1124
PspPI	GGNCC	2 cut(s)	1159, 1186
PspXI	VCTCGAGB	1 cut(s)	893
PsrI	GAACNNNNNNTAC	2 cut(s)	1208, 1240
PstI	CTGCAG	1 cut(s)	1510
PstNI	CAGNNNCTG	1 cut(s)	448
PsuI	RGATCY	3 cut(s)	82, 700, 928
PsyI	GACNNNGTC	1 cut(s)	837
RsaI	GTAC	2 cut(s)	1441, 1718
RsaNI	GTAC	2 cut(s)	1440, 1717
RseI	CAYNNNNRTG	3 cut(s)	1392, 1395, 1481
SacII	CCGCGG	1 cut(s)	202
SaqAI	TTAA	6 cut(s)	465, 687, 915, 1530, 1643, 1709
Sau3AI	GATC	8 cut(s)	82, 232, 700, 856, 928, 1090, 1201, 1543
Sau96I	GGNCC	2 cut(s)	1159, 1186
SbfI	CCTGCAGG	1 cut(s)	1510
SchI	GAGTC	3 cut(s)	1475, 1543, 1628
ScrFI	CCNGG	2 cut(s)	122, 1590
SdaI	CCTGCAGG	1 cut(s)	1510
SduI	GDGCHC	1 cut(s)	1024
SfaNI	GCATC	6 cut(s)	107, 120, 171, 834, 1387, 1440
SfcI	CTRYAG	1 cut(s)	1506
SfoI	GGCGCC	1 cut(s)	620
Sfr274I	CTCGAG	1 cut(s)	893
Sfr303I	CCGCGG	1 cut(s)	202
SgrBI	CCGCGG	1 cut(s)	202
SinI	GGWCC	1 cut(s)	1186
SlaI	CTCGAG	1 cut(s)	893
SmiMI	CAYNNNNRTG	3 cut(s)	1392, 1395, 1481
SmlI	CTYRAG	8 cut(s)	716, 893, 944, 1136, 1266, 1289, 1568, 1623
SmoI	CTYRAG	8 cut(s)	716, 893, 944, 1136, 1266, 1289, 1568, 1623
SphI	GCATGC	1 cut(s)	886
Sse8387I	CCTGCAGG	1 cut(s)	1510
Sse9I	AATT	9 cut(s)	27, 434, 491, 656, 797, 1028, 1256, 1557, 1604
SsiI	CCGC	9 cut(s)	134, 138, 178, 199, 201, 207, 310, 321, 1326
SspDI	GGCGCC	1 cut(s)	618
SspMI	CTAG	2 cut(s)	680, 1631
StyD4I	CCNGG	2 cut(s)	120, 1588
TaaI	ACNGT	8 cut(s)	533, 633, 837, 854, 867, 1110, 1154, 1519
TaiI	ACGT	4 cut(s)	388, 1087, 1432, 1650
TaqI	TCGA	5 cut(s)	275, 743, 894, 1171, 1356
TasI	AATT	9 cut(s)	27, 434, 491, 656, 797, 1028, 1256, 1557, 1604
TatI	WGTACW	1 cut(s)	1439
TauI	GCSGC	5 cut(s)	136, 141, 201, 312, 1329
TfiI	GAWTC	2 cut(s)	1403, 1670
Tru1I	TTAA	6 cut(s)	465, 687, 915, 1530, 1643, 1709
Tru9I	TTAA	6 cut(s)	465, 687, 915, 1530, 1643, 1709
TscAI	CASTG	9 cut(s)	161, 260, 416, 638, 779, 859, 872, 1010, 1115
TspDTI	ATGAA	3 cut(s)	1229, 1323, 1695
TspGWI	ACGGA	1 cut(s)	497
TspRI	CASTG	9 cut(s)	161, 260, 416, 638, 779, 859, 872, 1010, 1115
Tth111I	GACNNNGTC	1 cut(s)	837
Van91I	CCANNNNNTGG	1 cut(s)	97
VneI	GTGCAC	1 cut(s)	1020
VpaK11BI	GGWCC	1 cut(s)	1186
VspI	ATTAAT	1 cut(s)	915
XapI	RAATTY	2 cut(s)	1256, 1604
XceI	RCATGY	2 cut(s)	886, 1246
XhoI	CTCGAG	1 cut(s)	893
XmiI	GTMKAC	1 cut(s)	1521
XspI	CTAG	2 cut(s)	680, 1631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.