MD14G1143100.v1.1

HEAT repeat-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
23578272 .. 23582913
4642 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1143100.v1.1.491

Sequence Viewer

Length: 1779 bp
ATGCTATTCCGATTTTCAGAACAAGTTAGCAACCCAACGATATGCTTTGAGGCTCTTCAGGCTGTGTCCCACAATTACCCAAGCATAATGTTCTGCTGTTGGGAACGAATTTCCACCATTGTTTATGGCGTTTTGAGGGCAGCTACTCATGAAGTGCCTACAGGATCTTGGAAGGGAAATACTGGAAATTTTGTCGGATTTATTGGGGAAAAGGTCATTACAGCTACTATTAAAGTTCTGGACGAATGTCTACATGCAATATCAGGATTTAAAGGAACTGAAGACCCTTTAGATGATAAGTTACTTGATGCTCCATTTATTTCGGACTGCGTAAGGATGAAGAAAGTTTCATCGGCGCCATTGTATGAACCAGAGAACTCAGAAAATACAATAGATGAACCCACATCATGTCAATCTGGAACGGAGCAGTGGTGTGAGGCAATTGAGAAGCACATGCCTCTGATTCTGCACCATACTTCTGCAGTGGTGAGAGCAGCATCAGTTACATGTTTTGCTGGTATAACCTCTTCTGTATACTTCTCATTCCCAAAGGAAAAACAAGACTTCATTCTTTCTTCTTGTGTTCGTGCTGCCGTAAATGATGTGCCTTCAGTTAGGTCAGCTGCTTGTCGAGCCCTTGGAGTCATATCAATGTTTCCTCAAGTTTCTCAAAGAGTTCTTATTATCTGTGTGAATAACTGCTTCTTGGGCTGCTATCCCGAAATCTCTAAATTATTCATATTATTAACCGAGTGTGCTTTGTGTCTGACCAAGGATGGAGACAAGGTTAAATCAAATGCTGTAAGGGCTCTGGGGAATCTTTCAAGATCTATCAAATATAGAAGCGGTAGTGACAGGACAGTAGACAATAATGGATCGACAATAAAGAGCACTAAACCTTACAAAATACCATCAAGCAATTACAGGGAAGGAAGTCAAAGAGATGTGTCACTGTCATGCCATCCAGCTTCTTTGGGAGATTCACGTTGGCTTGAGCAAGTCATTCAGGCATTGATTTCTTGTGTTACAACTGGTAATGTTAAGGTCCAATGGAATGTTTGTCATGCTTTGAGCAACCTATTTCTGAATGAAACATTAAGATTGCAAGACATGGATTGGGCTTCATCTATGTGTAGTATTCTTCTACTGCTATTGCACGATTCTTCCAACTTTAAGATCAGGATTCAAGCTGCTTCTGCTTTGGTGCCAGCATCAATCCTTGATTATGGAGAATCCTTCCCAAATATCATCCAGGGTTTGGTCCATATATTAGAGAATCAAGGTTCAGACCGGATTGCATCACCGTCAAATTTCAAATATAGGGTTGCACTTGAAAACCAGTTGACCTCAACCGTGTTGCATGTTCTTATCCTCACTTCAAGTTCAGATCATGAACCCGTCAAAGATTTCCTTGTAAAAAAAGCTTCATTCCTTGAAGACTGGTTCAAGGCCCTTTGCTTGTTACTAGGAGAGACAAGAAGTAGTCAAGGTGAACTTGAAGATAATAAATCCATCAGGAATCCAAAGAAAGAGATTGGGACGCTAATCCAATTGTACAATAGCAGGAAGCATCATGCAATTGAGCAGAAATTCGAGAAGTTAGCGAATAGCAGTGAGTTCTCAGTTGACCTTCATATTCCTGCTGTACATACCAACCCTGTGATCAAGTTCCTTGCACAGCCACATGCTGTACCGGAAAAATGCTGCCATTTGAAGGCAACATTTTCACGGGGACACGGGATCTCGGAGATGCACTGGCAGCATACGGAGGACTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

593

Amino Acids

65.69

Weight (kDa)

6.72

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 355, 1204
AccB7I CCANNNNNTGG 1 cut(s) 1258
AccI GTMKAC 3 cut(s) 250, 534, 864
AciI CCGC 1 cut(s) 846
AclWI GGATC 3 cut(s) 172, 883, 1748
AcsI RAATTY 4 cut(s) 108, 187, 1309, 1589
AcuI CTGAAG 3 cut(s) 41, 300, 594
AcyI GRCGYC 1 cut(s) 356
AfaI GTAC 3 cut(s) 1556, 1647, 1692
AfiI CCNNNNNNNGG 2 cut(s) 1258, 1714
AflIII ACRYGT 1 cut(s) 506
AgsI TTSAA 9 cut(s) 825, 1187, 1315, 1334, 1380, 1436, 1447, 1499, 1714
AjnI CCWGG 1 cut(s) 1251
AluBI AGCT 6 cut(s) 143, 224, 623, 968, 1190, 1424
AluI AGCT 6 cut(s) 143, 224, 623, 968, 1190, 1424
Alw21I GWGCWC 1 cut(s) 893
Alw26I GTCTC 2 cut(s) 774, 1466
AlwI GGATC 3 cut(s) 172, 883, 1748
AoxI GGCC 1 cut(s) 1449
ApeKI GCWGC 8 cut(s) 140, 494, 590, 623, 711, 1190, 1704, 1759
ApoI RAATTY 4 cut(s) 108, 187, 1309, 1589
AspLEI GCGC 1 cut(s) 358
AspS9I GGNCC 3 cut(s) 1045, 1261, 1450
AsuHPI GGTGA 3 cut(s) 499, 1293, 1502
AvaII GGWCC 2 cut(s) 1045, 1261
BanI GGYRCC 2 cut(s) 355, 1204
BanII GRGCYC 2 cut(s) 637, 811
BarI GAAGNNNNNNTAC 2 cut(s) 511, 543
BbsI GAAGAC 2 cut(s) 288, 1443
Bbv12I GWGCWC 1 cut(s) 893
BbvI GCAGC 8 cut(s) 152, 506, 577, 610, 698, 1177, 1691, 1771
BccI CCATC 4 cut(s) 770, 919, 969, 1520
BceAI ACGGC 1 cut(s) 578
BciT130I CCWGG 1 cut(s) 1253
BclI TGATCA 1 cut(s) 1662
BcoDI GTCTC 2 cut(s) 774, 1466
BfaI CTAG 1 cut(s) 1466
BfmI CTRYAG 2 cut(s) 159, 480
BfoI RGCGCY 1 cut(s) 359
BglII AGATCT 1 cut(s) 827
BisI GCNGC 8 cut(s) 141, 495, 591, 624, 712, 1191, 1705, 1760
BlsI GCNGC 8 cut(s) 142, 496, 592, 625, 713, 1192, 1706, 1761
Bme1390I CCNGG 1 cut(s) 1253
Bme18I GGWCC 2 cut(s) 1045, 1261
BmgT120I GGNCC 3 cut(s) 1045, 1261, 1450
BmiI GGNNCC 2 cut(s) 357, 1206
BmrFI CCNGG 1 cut(s) 1253
BmsI GCATC 6 cut(s) 298, 506, 1220, 1307, 1579, 1740
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 2 cut(s) 288, 1443
BpuEI CTTGAG 2 cut(s) 645, 1013
BsaHI GRCGYC 1 cut(s) 356
BsaJI CCNNGG 3 cut(s) 637, 771, 1252
BsaWI WCCGGW 2 cut(s) 1290, 1693
BsaXI ACNNNNNCTCC 4 cut(s) 416, 446, 771, 801
Bsc4I CCNNNNNNNGG 2 cut(s) 1258, 1714
Bse1I ACTGG 5 cut(s) 187, 1036, 1339, 1445, 1760
BseBI CCWGG 1 cut(s) 1253
BseDI CCNNGG 3 cut(s) 637, 771, 1252
BseGI GGATG 4 cut(s) 342, 781, 961, 1248
BseLI CCNNNNNNNGG 2 cut(s) 1258, 1714
BseMII CTCAG 2 cut(s) 393, 1635
BseNI ACTGG 5 cut(s) 187, 1036, 1339, 1445, 1760
BseXI GCAGC 8 cut(s) 152, 506, 577, 610, 698, 1177, 1691, 1771
BsgI GTGCAG 1 cut(s) 452
BshFI GGCC 1 cut(s) 1451
BshNI GGYRCC 2 cut(s) 355, 1204
BsiHKAI GWGCWC 1 cut(s) 893
BsiSI CCGG 2 cut(s) 1291, 1694
BslFI GGGAC 3 cut(s) 52, 1552, 1746
BslI CCNNNNNNNGG 2 cut(s) 1258, 1714
BsmAI GTCTC 2 cut(s) 774, 1466
BsmFI GGGAC 3 cut(s) 52, 1552, 1746
BsnI GGCC 1 cut(s) 1451
Bsp1286I GDGCHC 3 cut(s) 637, 811, 893
Bsp1407I TGTACA 2 cut(s) 1554, 1645
Bsp143I GATC 7 cut(s) 164, 827, 875, 1176, 1387, 1662, 1740
BspACI CCGC 1 cut(s) 846
BspANI GGCC 1 cut(s) 1451
BspCNI CTCAG 2 cut(s) 392, 1634
BspHI TCATGA 2 cut(s) 148, 1390
BspLI GGNNCC 2 cut(s) 357, 1206
BspMAI CTGCAG 1 cut(s) 484
BspPI GGATC 3 cut(s) 172, 883, 1748
BspQI GCTCTTC 1 cut(s) 60
BspT107I GGYRCC 2 cut(s) 355, 1204
BsrGI TGTACA 2 cut(s) 1554, 1645
BsrI ACTGG 5 cut(s) 187, 1036, 1339, 1445, 1760
BssECI CCNNGG 3 cut(s) 637, 771, 1252
BssMI GATC 7 cut(s) 164, 827, 875, 1176, 1387, 1662, 1740
BssNAI GTATAC 1 cut(s) 535
BssNI GRCGYC 1 cut(s) 356
BssT1I CCWWGG 2 cut(s) 637, 771
Bst1107I GTATAC 1 cut(s) 535
Bst2UI CCWGG 1 cut(s) 1253
Bst4CI ACNGT 4 cut(s) 862, 954, 1305, 1354
Bst6I CTCTTC 2 cut(s) 60, 532
BstACI GRCGYC 1 cut(s) 356
BstAUI TGTACA 2 cut(s) 1554, 1645
BstC8I GCNNGC 1 cut(s) 1209
BstDEI CTNAG 3 cut(s) 379, 1621, 1776
BstF5I GGATG 4 cut(s) 342, 781, 961, 1248
BstH2I RGCGCY 1 cut(s) 359
BstHHI GCGC 1 cut(s) 358
BstKTI GATC 7 cut(s) 167, 830, 878, 1179, 1390, 1665, 1743
BstMAI GTCTC 2 cut(s) 774, 1466
BstMBI GATC 7 cut(s) 164, 827, 875, 1176, 1387, 1662, 1740
BstMWI GCNNNNNNNGC 6 cut(s) 59, 632, 708, 806, 1196, 1759
BstNI CCWGG 1 cut(s) 1253
BstNSI RCATGY 5 cut(s) 257, 457, 510, 1364, 1688
BstPAI GACNNNNGTC 1 cut(s) 246
BstSCI CCNGG 1 cut(s) 1251
BstSFI CTRYAG 2 cut(s) 159, 480
BstV1I GCAGC 8 cut(s) 152, 506, 577, 610, 698, 1177, 1691, 1771
BstV2I GAAGAC 2 cut(s) 288, 1443
BstX2I RGATCY 3 cut(s) 164, 827, 1740
BstYI RGATCY 3 cut(s) 164, 827, 1740
BstZ17I GTATAC 1 cut(s) 535
BsuRI GGCC 1 cut(s) 1451
BtsCI GGATG 4 cut(s) 342, 781, 961, 1248
BtsI GCAGTG 3 cut(s) 434, 489, 1618
BtsIMutI CAGTG 5 cut(s) 434, 489, 950, 1618, 1753
Cac8I GCNNGC 1 cut(s) 1209
CciI TCATGA 2 cut(s) 148, 1390
CfoI GCGC 1 cut(s) 358
Cfr13I GGNCC 3 cut(s) 1045, 1261, 1450
CseI GACGC 1 cut(s) 1549
Csp6I GTAC 3 cut(s) 1555, 1646, 1691
CviQI GTAC 3 cut(s) 1555, 1646, 1691
DdeI CTNAG 3 cut(s) 379, 1621, 1776
DinI GGCGCC 1 cut(s) 357
DpnI GATC 7 cut(s) 166, 829, 877, 1178, 1389, 1664, 1742
DpnII GATC 7 cut(s) 164, 827, 875, 1176, 1387, 1662, 1740
DraI TTTAAA 1 cut(s) 271
Eam1104I CTCTTC 2 cut(s) 60, 532
EarI CTCTTC 2 cut(s) 60, 532
Eco130I CCWWGG 2 cut(s) 637, 771
Eco24I GRGCYC 2 cut(s) 637, 811
Eco47I GGWCC 2 cut(s) 1045, 1261
Eco57I CTGAAG 3 cut(s) 41, 300, 594
EcoO109I RGGNCCY 1 cut(s) 1450
EcoRII CCWGG 1 cut(s) 1251
EcoT14I CCWWGG 2 cut(s) 637, 771
EcoT38I GRGCYC 2 cut(s) 637, 811
EgeI GGCGCC 1 cut(s) 357
EheI GGCGCC 1 cut(s) 357
ErhI CCWWGG 2 cut(s) 637, 771
FalI AAGNNNNNCTT 4 cut(s) 1395, 1427, 1479, 1511
FaqI GGGAC 3 cut(s) 52, 1552, 1746
FbaI TGATCA 1 cut(s) 1662
FblI GTMKAC 3 cut(s) 250, 534, 864
Fnu4HI GCNGC 8 cut(s) 141, 495, 591, 624, 712, 1191, 1705, 1760
FokI GGATG 4 cut(s) 349, 788, 948, 1235
FriOI GRGCYC 2 cut(s) 637, 811
Fsp4HI GCNGC 8 cut(s) 141, 495, 591, 624, 712, 1191, 1705, 1760
FspBI CTAG 1 cut(s) 1466
GlaI GCGC 1 cut(s) 357
GluI GCNGC 8 cut(s) 141, 495, 591, 624, 712, 1191, 1705, 1760
HaeII RGCGCY 1 cut(s) 359
HaeIII GGCC 1 cut(s) 1451
HapII CCGG 2 cut(s) 1291, 1694
HgaI GACGC 1 cut(s) 1549
HhaI GCGC 1 cut(s) 358
Hin1I GRCGYC 1 cut(s) 356
Hin6I GCGC 1 cut(s) 356
HinP1I GCGC 1 cut(s) 356
HincII GTYRAC 2 cut(s) 1344, 1627
HindII GTYRAC 2 cut(s) 1344, 1627
HindIII AAGCTT 1 cut(s) 1422
HpaII CCGG 2 cut(s) 1291, 1694
HphI GGTGA 3 cut(s) 499, 1293, 1502
Hpy166II GTNNAC 6 cut(s) 251, 535, 865, 1344, 1493, 1627
Hpy8I GTNNAC 6 cut(s) 251, 535, 865, 1344, 1493, 1627
HpyAV CCTTC 6 cut(s) 166, 618, 923, 1246, 1640, 1708
HpyCH4III ACNGT 4 cut(s) 862, 954, 1305, 1354
HpyCH4IV ACGT 1 cut(s) 985
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 632, 708, 806, 1196, 1759
HpyF3I CTNAG 3 cut(s) 379, 1621, 1776
HpySE526I ACGT 1 cut(s) 985
Hsp92I GRCGYC 1 cut(s) 356
HspAI GCGC 1 cut(s) 356
KasI GGCGCC 1 cut(s) 355
Ksp22I TGATCA 1 cut(s) 1662
Kzo9I GATC 7 cut(s) 164, 827, 875, 1176, 1387, 1662, 1740
LguI GCTCTTC 1 cut(s) 60
LmnI GCTCC 2 cut(s) 316, 424
Lsp1109I GCAGC 8 cut(s) 152, 506, 577, 610, 698, 1177, 1691, 1771
LweI GCATC 6 cut(s) 298, 506, 1220, 1307, 1579, 1740
MaeI CTAG 1 cut(s) 1466
MaeII ACGT 1 cut(s) 985
MaeIII GTNAC 6 cut(s) 300, 502, 851, 948, 1024, 1461
MalI GATC 7 cut(s) 166, 829, 877, 1178, 1389, 1664, 1742
MboI GATC 7 cut(s) 164, 827, 875, 1176, 1387, 1662, 1740
MboII GAAGA 9 cut(s) 47, 293, 352, 519, 567, 1133, 1155, 1448, 1511
MfeI CAATTG 3 cut(s) 441, 1550, 1578
MflI RGATCY 3 cut(s) 164, 827, 1740
MhlI GDGCHC 3 cut(s) 637, 811, 893
Mly113I GGCGCC 1 cut(s) 356
MlyI GAGTC 2 cut(s) 651, 1766
MmeI TCCRAC 2 cut(s) 175, 1191
MnlI CCTC 9 cut(s) 43, 129, 430, 468, 535, 669, 1357, 1382, 1762
MseI TTAA 7 cut(s) 231, 270, 746, 789, 1041, 1097, 1173
MslI CAYNNNNRTG 3 cut(s) 650, 955, 1129
MspA1I CMGCKG 1 cut(s) 623
MspI CCGG 2 cut(s) 1291, 1694
MspR9I CCNGG 1 cut(s) 1253
MunI CAATTG 3 cut(s) 441, 1550, 1578
MvaI CCWGG 1 cut(s) 1253
MwoI GCNNNNNNNGC 6 cut(s) 59, 632, 708, 806, 1196, 1759
NarI GGCGCC 1 cut(s) 356
NdeII GATC 7 cut(s) 164, 827, 875, 1176, 1387, 1662, 1740
NlaIV GGNNCC 2 cut(s) 357, 1206
NmuCI GTSAC 2 cut(s) 851, 948
NspI RCATGY 5 cut(s) 257, 457, 510, 1364, 1688
PagI TCATGA 2 cut(s) 148, 1390
PciI ACATGT 1 cut(s) 506
PciSI GCTCTTC 1 cut(s) 60
PfeI GAWTC 8 cut(s) 463, 817, 980, 1160, 1183, 1232, 1276, 1519
PflMI CCANNNNNTGG 1 cut(s) 1258
PkrI GCNGC 8 cut(s) 142, 496, 592, 625, 713, 1192, 1706, 1761
PleI GAGTC 2 cut(s) 650, 1766
PluTI GGCGCC 1 cut(s) 359
PpsI GAGTC 2 cut(s) 650, 1766
PscI ACATGT 1 cut(s) 506
PshAI GACNNNNGTC 1 cut(s) 246
Psp6I CCWGG 1 cut(s) 1251
PspGI CCWGG 1 cut(s) 1251
PspN4I GGNNCC 2 cut(s) 357, 1206
PspPI GGNCC 3 cut(s) 1045, 1261, 1450
PstI CTGCAG 1 cut(s) 484
PsuI RGATCY 3 cut(s) 164, 827, 1740
PvuII CAGCTG 1 cut(s) 623
RsaI GTAC 3 cut(s) 1556, 1647, 1692
RsaNI GTAC 3 cut(s) 1555, 1646, 1691
RseI CAYNNNNRTG 3 cut(s) 650, 955, 1129
SapI GCTCTTC 1 cut(s) 60
SaqAI TTAA 7 cut(s) 231, 270, 746, 789, 1041, 1097, 1173
SatI GCNGC 8 cut(s) 141, 495, 591, 624, 712, 1191, 1705, 1760
Sau3AI GATC 7 cut(s) 164, 827, 875, 1176, 1387, 1662, 1740
Sau96I GGNCC 3 cut(s) 1045, 1261, 1450
SchI GAGTC 2 cut(s) 651, 1766
ScrFI CCNGG 1 cut(s) 1253
SduI GDGCHC 3 cut(s) 637, 811, 893
SfaNI GCATC 6 cut(s) 298, 506, 1220, 1307, 1579, 1740
SfcI CTRYAG 2 cut(s) 159, 480
SfoI GGCGCC 1 cut(s) 357
SinI GGWCC 2 cut(s) 1045, 1261
SmiMI CAYNNNNRTG 3 cut(s) 650, 955, 1129
SmlI CTYRAG 2 cut(s) 660, 992
SmoI CTYRAG 2 cut(s) 660, 992
SsiI CCGC 1 cut(s) 846
SspDI GGCGCC 1 cut(s) 355
SspMI CTAG 1 cut(s) 1466
StyD4I CCNGG 1 cut(s) 1251
StyI CCWWGG 2 cut(s) 637, 771
TaaI ACNGT 4 cut(s) 862, 954, 1305, 1354
TaiI ACGT 1 cut(s) 988
TaqI TCGA 3 cut(s) 631, 878, 1593
TatI WGTACW 2 cut(s) 1554, 1645
TfiI GAWTC 8 cut(s) 463, 817, 980, 1160, 1183, 1232, 1276, 1519
Tru1I TTAA 7 cut(s) 231, 270, 746, 789, 1041, 1097, 1173
Tru9I TTAA 7 cut(s) 231, 270, 746, 789, 1041, 1097, 1173
TscAI CASTG 5 cut(s) 434, 489, 957, 1618, 1760
TseFI GTSAC 2 cut(s) 851, 948
TseI GCWGC 8 cut(s) 140, 494, 590, 623, 711, 1190, 1704, 1759
Tsp45I GTSAC 2 cut(s) 851, 948
TspGWI ACGGA 1 cut(s) 437
TspRI CASTG 5 cut(s) 434, 489, 957, 1618, 1760
Van91I CCANNNNNTGG 1 cut(s) 1258
VpaK11BI GGWCC 2 cut(s) 1045, 1261
XapI RAATTY 4 cut(s) 108, 187, 1309, 1589
XceI RCATGY 5 cut(s) 257, 457, 510, 1364, 1688
XmiI GTMKAC 3 cut(s) 250, 534, 864
XspI CTAG 1 cut(s) 1466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.