Rh7CG093700

HEAT repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0003181
Physical Location & Seq
Forward (+)
7034505 .. 7040722
6218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG093700.1

Sequence Viewer

Length: 1656 bp
ATGATGCTTGATGGTTTCGGCAACATGCTTCAATTTTTCATTGCCTCTTCATCATTTACGCCCAGCATGGAATGCTTACAGACTCTGAGGCGTGCTATGAGCACCTACCAGAGGAAGTGTTCTCTGGCCGATGAGATTCAGCTGAAGCCAGCTTACCAGGCCGATGAGGAATCTTCCACACTTGACCTCGCCTCTCTGATTTATAGTGACAGTGATGGATCACTTAAAGACACTGAGAGCATTCAGAAATCGAAGGTCAGAGTAGCTGCCACTGTTTGTATACAGGTTGCATCTGCCTCAACTCTGGAAGCAATGTTGGATGGGCCTTCTTCTGTTTTTCTGCAGGTAGCAGAGTTCAAAGAGTCTTCTAAAAGGGGATCTTTTACAGCACTTTCAAGTTCCCTTGGACATATACTAATGCAGCTTCATACAGGTATTTTATACTTAATTCAACGAGAAACTCATAGTAGATTGCTGGCATCCTTGTTCAAGATTCTCATGCTTTTGATATCATCTACACCATATTCAAGAATGCCCGGAGAATTGTTGCCAACAGTTTTTACATCTCTGCAAGAAAGGATACAAAATGGGTTTCAGTTTAAAACTGATCAGACTGGCCTGCTGGTTTCTTCTTTTAGTTGCTTGACTACAGCTCTGAATACCTCACCATCTTCACCGCAAATCAAAGAAATGCTTCAGAGAGAGATATTTAATGGTTTTGCCGAGGCCAAAAAGAAGTCAGGTGTTCTTTTTACGTTGTTTCAATTTTCAGAACAAGTTAGCAACCCGCCAATATCCTTTGAGGCTCTTCAGGCGCTTAGGGCTGTGTCACACAATTACCCCAGTATAATGTTTTCCTGTTGGGAACAAATTTCCACCATTGTTTATCACCTTTTGAGGGCAGCTACTCCTGAAGTTCCTGCAGGACAATGGAAAGGGCATTCTGGAAATTCTGTTGGATTAATTGGGGAAAAACTCATTACAGCTGCTATTAGAGTTTTGGATGAATCTCTTCGTGCAATATCTGGATTTAAAGGAATGGAAGACCCTTTAGACGATAAACTACTTGATGCCCCATTTACTTCTGACTGCATAAGGATGAAGAAAGTTTCATCAGCTCCTTCATATGAACTAGAGAGCTTGGAAAATACTAGAGATGAACCCACATCATGTCAGTCTGGAATTGAGCAGTGGTGTGAGGCAATTGAGAAGCATATGCCTTTAATTCTACAACATACTTCTGCAATGGTGAGAGCTGCCTCAGTTACCTGTTTTGCGGGTATAACTTCTTCTGTGTTCTGCACACTCTCGAAGGAAAAACGGGACTTCATTCTTTCATCTTTAGTTCGTGCTGCTGTACACGGTGATGTACCTTCAATTAGGGCAGCTGCTTGTCGGGCCATTGGACAAAAGTTTACTAAGAACTCAAATTATAGTGCAGAGATCCTTGATAAGTTTGTTCATGCTGTGGAGAGTAACACTCGTGATCCTTTGGTCTCGGTCCGAATAACTGCTTCTTGGGCTTTGGCAAACATATGTGATTCTATCCATCATTGTATTGATGATTTTAGCTTGGAAAAGACTGAAGGCTTCGCAGCCAGGCGTACCAGTCAACCACATAATTCTAGAACTTTCATGGTTAACAATAACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4042 HEAT

Protein Analysis

551

Amino Acids

60.77

Weight (kDa)

6.51

Isoelectric Point (pI)

47.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4042 PF13251 95 - 222 1.4e-28 Domain of unknown function (DUF4042)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 334
AccI GTMKAC 1 cut(s) 280
AciI CCGC 3 cut(s) 677, 788, 1277
AclWI GGATC 4 cut(s) 226, 385, 1438, 1481
AcoI YGGCCR 1 cut(s) 126
AcsI RAATTY 2 cut(s) 870, 949
AcuI CTGAAG 5 cut(s) 164, 680, 794, 933, 1605
AfaI GTAC 3 cut(s) 1359, 1371, 1606
AfiI CCNNNNNNNGG 2 cut(s) 111, 898
AgsI TTSAA 8 cut(s) 32, 358, 396, 452, 490, 528, 764, 1377
AjnI CCWGG 2 cut(s) 156, 1598
Alw21I GWGCWC 1 cut(s) 104
Alw26I GTCTC 1 cut(s) 1501
AlwI GGATC 4 cut(s) 226, 385, 1438, 1481
AlwNI CAGNNNCTG 1 cut(s) 85
AoxI GGCC 6 cut(s) 126, 159, 323, 616, 726, 1398
ApeKI GCWGC 9 cut(s) 266, 421, 902, 986, 1256, 1352, 1385, 1388, 1595
ApoI RAATTY 2 cut(s) 870, 949
AseI ATTAAT 1 cut(s) 962
Asp700I GAANNNNTTC 2 cut(s) 693, 1011
AspLEI GCGC 1 cut(s) 817
AspS9I GGNCC 3 cut(s) 323, 1398, 1501
AsuC2I CCSGG 1 cut(s) 537
AsuHPI GGTGA 5 cut(s) 657, 666, 881, 1261, 1376
AvaII GGWCC 1 cut(s) 1501
BarI GAAGNNNNNNTAC 4 cut(s) 137, 169, 1273, 1305
BauI CACGAG 1 cut(s) 1482
BbsI GAAGAC 2 cut(s) 357, 1050
Bbv12I GWGCWC 1 cut(s) 104
BbvI GCAGC 9 cut(s) 253, 433, 914, 973, 1243, 1339, 1375, 1397, 1607
BccI CCATC 5 cut(s) 5, 209, 314, 676, 1557
BciT130I CCWGG 2 cut(s) 158, 1600
BciVI GTATCC 1 cut(s) 573
BclI TGATCA 1 cut(s) 607
BcnI CCSGG 1 cut(s) 537
BcoDI GTCTC 1 cut(s) 1501
BfaI CTAG 3 cut(s) 1133, 1152, 1626
BfmI CTRYAG 3 cut(s) 341, 648, 921
BfoI RGCGCY 1 cut(s) 818
BfuAI ACCTGC 1 cut(s) 334
BfuI GTATCC 1 cut(s) 573
BisI GCNGC 9 cut(s) 267, 422, 903, 987, 1257, 1353, 1386, 1389, 1596
BlsI GCNGC 9 cut(s) 268, 423, 904, 988, 1258, 1354, 1387, 1390, 1597
Bme1390I CCNGG 3 cut(s) 158, 537, 1600
Bme18I GGWCC 1 cut(s) 1501
BmgT120I GGNCC 3 cut(s) 323, 1398, 1501
BmrFI CCNGG 3 cut(s) 158, 537, 1600
BmrI ACTGGG 1 cut(s) 837
BmsI GCATC 3 cut(s) 299, 488, 1060
BmuI ACTGGG 1 cut(s) 837
BpiI GAAGAC 2 cut(s) 357, 1050
BplI GAGNNNNNCTC 2 cut(s) 1465, 1497
Bpu10I CCTNAGC 1 cut(s) 818
BpuMI CCSGG 1 cut(s) 537
BsaI GGTCTC 1 cut(s) 1501
BsaJI CCNNGG 2 cut(s) 403, 723
Bsc4I CCNNNNNNNGG 2 cut(s) 111, 898
Bse1I ACTGG 3 cut(s) 619, 843, 1608
Bse3DI GCAATG 3 cut(s) 39, 318, 1251
BseBI CCWGG 2 cut(s) 158, 1600
BseDI CCNNGG 2 cut(s) 403, 723
BseGI GGATG 4 cut(s) 325, 479, 1009, 1104
BseLI CCNNNNNNNGG 2 cut(s) 111, 898
BseMI GCAATG 3 cut(s) 39, 318, 1251
BseMII CTCAG 3 cut(s) 77, 225, 1275
BseNI ACTGG 3 cut(s) 619, 843, 1608
BseXI GCAGC 9 cut(s) 253, 433, 914, 973, 1243, 1339, 1375, 1397, 1607
BseYI CCCAGC 1 cut(s) 62
BsgI GTGCAG 2 cut(s) 1285, 1458
BshFI GGCC 6 cut(s) 128, 161, 325, 618, 728, 1400
BsiHKAI GWGCWC 1 cut(s) 104
BsiSI CCGG 1 cut(s) 537
BslFI GGGAC 1 cut(s) 1337
BslI CCNNNNNNNGG 2 cut(s) 111, 898
BsmAI GTCTC 1 cut(s) 1501
BsmFI GGGAC 1 cut(s) 1337
BsmI GAATGC 4 cut(s) 77, 240, 537, 940
BsnI GGCC 6 cut(s) 128, 161, 325, 618, 728, 1400
Bso31I GGTCTC 1 cut(s) 1501
Bsp1286I GDGCHC 1 cut(s) 104
Bsp1407I TGTACA 1 cut(s) 1357
Bsp143I GATC 5 cut(s) 218, 377, 607, 1443, 1486
BspACI CCGC 3 cut(s) 677, 788, 1277
BspANI GGCC 6 cut(s) 128, 161, 325, 618, 728, 1400
BspCNI CTCAG 3 cut(s) 78, 226, 1274
BspMAI CTGCAG 2 cut(s) 345, 925
BspMI ACCTGC 1 cut(s) 334
BspPI GGATC 4 cut(s) 226, 385, 1438, 1481
BspQI GCTCTTC 1 cut(s) 813
BspTNI GGTCTC 1 cut(s) 1501
BsrDI GCAATG 3 cut(s) 39, 318, 1251
BsrGI TGTACA 1 cut(s) 1357
BsrI ACTGG 3 cut(s) 619, 843, 1608
BssECI CCNNGG 2 cut(s) 403, 723
BssMI GATC 5 cut(s) 218, 377, 607, 1443, 1486
BssNAI GTATAC 1 cut(s) 281
BssSI CACGAG 1 cut(s) 1482
BssT1I CCWWGG 1 cut(s) 403
Bst1107I GTATAC 1 cut(s) 281
Bst2BI CACGAG 1 cut(s) 1482
Bst2UI CCWGG 2 cut(s) 158, 1600
Bst4CI ACNGT 4 cut(s) 212, 274, 556, 1364
Bst6I CTCTTC 3 cut(s) 52, 813, 1017
BstAPI GCANNNNNTGC 1 cut(s) 72
BstAUI TGTACA 1 cut(s) 1357
BstC8I GCNNGC 4 cut(s) 93, 150, 477, 620
BstDEI CTNAG 5 cut(s) 86, 234, 818, 1261, 1419
BstENI CCTNNNNNAGG 1 cut(s) 109
BstF5I GGATG 4 cut(s) 325, 479, 1009, 1104
BstH2I RGCGCY 1 cut(s) 818
BstHHI GCGC 1 cut(s) 817
BstKTI GATC 5 cut(s) 221, 380, 610, 1446, 1489
BstMAI GTCTC 1 cut(s) 1501
BstMBI GATC 5 cut(s) 218, 377, 607, 1443, 1486
BstMWI GCNNNNNNNGC 6 cut(s) 72, 158, 812, 821, 1397, 1520
BstNI CCWGG 2 cut(s) 158, 1600
BstNSI RCATGY 1 cut(s) 28
BstSCI CCNGG 3 cut(s) 156, 535, 1598
BstSFI CTRYAG 3 cut(s) 341, 648, 921
BstV1I GCAGC 9 cut(s) 253, 433, 914, 973, 1243, 1339, 1375, 1397, 1607
BstV2I GAAGAC 2 cut(s) 357, 1050
BstX2I RGATCY 2 cut(s) 377, 1443
BstYI RGATCY 2 cut(s) 377, 1443
BstZ17I GTATAC 1 cut(s) 281
BsuI GTATCC 1 cut(s) 573
BsuRI GGCC 6 cut(s) 128, 161, 325, 618, 728, 1400
BtsCI GGATG 4 cut(s) 325, 479, 1009, 1104
BtsI GCAGTG 1 cut(s) 1196
BtsIMutI CAGTG 4 cut(s) 217, 231, 270, 1196
BveI ACCTGC 1 cut(s) 334
Cac8I GCNNGC 4 cut(s) 93, 150, 477, 620
CaiI CAGNNNCTG 1 cut(s) 85
CfoI GCGC 1 cut(s) 817
Cfr13I GGNCC 3 cut(s) 323, 1398, 1501
CpoI CGGWCCG 1 cut(s) 1501
Csp6I GTAC 3 cut(s) 1358, 1370, 1605
CspI CGGWCCG 1 cut(s) 1501
CviAII CATG 6 cut(s) 25, 67, 499, 1170, 1463, 1636
CviQI GTAC 3 cut(s) 1358, 1370, 1605
DdeI CTNAG 5 cut(s) 86, 234, 818, 1261, 1419
DpnI GATC 5 cut(s) 220, 379, 609, 1445, 1488
DpnII GATC 5 cut(s) 218, 377, 607, 1443, 1486
DraI TTTAAA 2 cut(s) 601, 1033
EaeI YGGCCR 1 cut(s) 126
Eam1104I CTCTTC 3 cut(s) 52, 813, 1017
EarI CTCTTC 3 cut(s) 52, 813, 1017
Eco130I CCWWGG 1 cut(s) 403
Eco31I GGTCTC 1 cut(s) 1501
Eco32I GATATC 1 cut(s) 510
Eco47I GGWCC 1 cut(s) 1501
Eco57I CTGAAG 5 cut(s) 164, 680, 794, 933, 1605
EcoNI CCTNNNNNAGG 1 cut(s) 109
EcoRII CCWGG 2 cut(s) 156, 1598
EcoRV GATATC 1 cut(s) 510
EcoT14I CCWWGG 1 cut(s) 403
ErhI CCWWGG 1 cut(s) 403
FaeI CATG 6 cut(s) 28, 70, 502, 1173, 1466, 1639
FalI AAGNNNNNCTT 4 cut(s) 364, 396, 678, 710
FaqI GGGAC 1 cut(s) 1337
FatI CATG 6 cut(s) 24, 66, 498, 1169, 1462, 1635
FauI CCCGC 2 cut(s) 795, 1270
FauNDI CATATG 3 cut(s) 1126, 1215, 1535
FbaI TGATCA 1 cut(s) 607
FblI GTMKAC 1 cut(s) 280
Fnu4HI GCNGC 9 cut(s) 267, 422, 903, 987, 1257, 1353, 1386, 1389, 1596
FokI GGATG 4 cut(s) 332, 466, 1016, 1111
Fsp4HI GCNGC 9 cut(s) 267, 422, 903, 987, 1257, 1353, 1386, 1389, 1596
FspBI CTAG 3 cut(s) 1133, 1152, 1626
GlaI GCGC 1 cut(s) 816
GluI GCNGC 9 cut(s) 267, 422, 903, 987, 1257, 1353, 1386, 1389, 1596
GsaI CCCAGC 1 cut(s) 66
HaeII RGCGCY 1 cut(s) 818
HaeIII GGCC 6 cut(s) 128, 161, 325, 618, 728, 1400
HapII CCGG 1 cut(s) 537
HhaI GCGC 1 cut(s) 817
Hin1II CATG 6 cut(s) 28, 70, 502, 1173, 1466, 1639
Hin6I GCGC 1 cut(s) 815
HinP1I GCGC 1 cut(s) 815
HincII GTYRAC 2 cut(s) 1613, 1642
HindII GTYRAC 2 cut(s) 1613, 1642
HinfI GANTC 7 cut(s) 82, 136, 170, 362, 493, 1007, 1541
HpaI GTTAAC 1 cut(s) 1642
HpaII CCGG 1 cut(s) 537
HphI GGTGA 5 cut(s) 657, 666, 881, 1261, 1376
Hpy166II GTNNAC 5 cut(s) 281, 1360, 1416, 1613, 1642
Hpy8I GTNNAC 5 cut(s) 281, 1360, 1416, 1613, 1642
HpyAV CCTTC 6 cut(s) 247, 336, 1131, 1306, 1383, 1580
HpyCH4III ACNGT 4 cut(s) 212, 274, 556, 1364
HpyCH4IV ACGT 1 cut(s) 755
HpyF10VI GCNNNNNNNGC 6 cut(s) 72, 158, 812, 821, 1397, 1520
HpyF3I CTNAG 5 cut(s) 86, 234, 818, 1261, 1419
HpySE526I ACGT 1 cut(s) 755
Hsp92II CATG 6 cut(s) 28, 70, 502, 1173, 1466, 1639
HspAI GCGC 1 cut(s) 815
Ksp22I TGATCA 1 cut(s) 607
KspAI GTTAAC 1 cut(s) 1642
Kzo9I GATC 5 cut(s) 218, 377, 607, 1443, 1486
LguI GCTCTTC 1 cut(s) 813
LmnI GCTCC 1 cut(s) 1123
Lsp1109I GCAGC 9 cut(s) 253, 433, 914, 973, 1243, 1339, 1375, 1397, 1607
LweI GCATC 3 cut(s) 299, 488, 1060
MaeI CTAG 3 cut(s) 1133, 1152, 1626
MaeII ACGT 1 cut(s) 755
MaeIII GTNAC 4 cut(s) 206, 828, 1264, 1475
MalI GATC 5 cut(s) 220, 379, 609, 1445, 1488
MboI GATC 5 cut(s) 218, 377, 607, 1443, 1486
MfeI CAATTG 1 cut(s) 1203
MflI RGATCY 2 cut(s) 377, 1443
MhlI GDGCHC 1 cut(s) 104
MlyI GAGTC 2 cut(s) 76, 371
MmeI TCCRAC 2 cut(s) 297, 937
MroXI GAANNNNTTC 2 cut(s) 693, 1011
MseI TTAA 8 cut(s) 225, 446, 600, 711, 962, 1032, 1223, 1641
MslI CAYNNNNRTG 2 cut(s) 1097, 1365
MspA1I CMGCKG 3 cut(s) 142, 986, 1388
MspI CCGG 1 cut(s) 537
MspR9I CCNGG 3 cut(s) 158, 537, 1600
MunI CAATTG 1 cut(s) 1203
Mva1269I GAATGC 4 cut(s) 77, 240, 537, 940
MvaI CCWGG 2 cut(s) 158, 1600
MwoI GCNNNNNNNGC 6 cut(s) 72, 158, 812, 821, 1397, 1520
NciI CCSGG 1 cut(s) 537
NdeI CATATG 3 cut(s) 1126, 1215, 1535
NdeII GATC 5 cut(s) 218, 377, 607, 1443, 1486
NlaIII CATG 6 cut(s) 28, 70, 502, 1173, 1466, 1639
NmeAIII GCCGAG 1 cut(s) 748
NmuCI GTSAC 2 cut(s) 206, 828
NspI RCATGY 1 cut(s) 28
PciSI GCTCTTC 1 cut(s) 813
PctI GAATGC 4 cut(s) 77, 240, 537, 940
PdmI GAANNNNTTC 2 cut(s) 693, 1011
PfeI GAWTC 5 cut(s) 136, 170, 493, 1007, 1541
PkrI GCNGC 9 cut(s) 268, 423, 904, 988, 1258, 1354, 1387, 1390, 1597
PleI GAGTC 2 cut(s) 76, 370
PpsI GAGTC 2 cut(s) 76, 370
PshBI ATTAAT 1 cut(s) 962
Psp6I CCWGG 2 cut(s) 156, 1598
PspFI CCCAGC 1 cut(s) 62
PspGI CCWGG 2 cut(s) 156, 1598
PspPI GGNCC 3 cut(s) 323, 1398, 1501
PstI CTGCAG 2 cut(s) 345, 925
PstNI CAGNNNCTG 1 cut(s) 85
PsuI RGATCY 2 cut(s) 377, 1443
PvuII CAGCTG 3 cut(s) 142, 986, 1388
RsaI GTAC 3 cut(s) 1359, 1371, 1606
RsaNI GTAC 3 cut(s) 1358, 1370, 1605
RseI CAYNNNNRTG 2 cut(s) 1097, 1365
Rsr2I CGGWCCG 1 cut(s) 1501
RsrII CGGWCCG 1 cut(s) 1501
SapI GCTCTTC 1 cut(s) 813
SaqAI TTAA 8 cut(s) 225, 446, 600, 711, 962, 1032, 1223, 1641
SatI GCNGC 9 cut(s) 267, 422, 903, 987, 1257, 1353, 1386, 1389, 1596
Sau3AI GATC 5 cut(s) 218, 377, 607, 1443, 1486
Sau96I GGNCC 3 cut(s) 323, 1398, 1501
SbfI CCTGCAGG 1 cut(s) 925
SchI GAGTC 2 cut(s) 76, 371
ScrFI CCNGG 3 cut(s) 158, 537, 1600
SdaI CCTGCAGG 1 cut(s) 925
SduI GDGCHC 1 cut(s) 104
SfaNI GCATC 3 cut(s) 299, 488, 1060
SfcI CTRYAG 3 cut(s) 341, 648, 921
SinI GGWCC 1 cut(s) 1501
SmiMI CAYNNNNRTG 2 cut(s) 1097, 1365
Sse8387I CCTGCAGG 1 cut(s) 925
SsiI CCGC 3 cut(s) 677, 788, 1277
SspMI CTAG 3 cut(s) 1133, 1152, 1626
StyD4I CCNGG 3 cut(s) 156, 535, 1598
StyI CCWWGG 1 cut(s) 403
TaaI ACNGT 4 cut(s) 212, 274, 556, 1364
TaiI ACGT 1 cut(s) 758
TaqI TCGA 2 cut(s) 251, 1310
TaqII GACCGA 1 cut(s) 1489
TatI WGTACW 1 cut(s) 1357
TfiI GAWTC 5 cut(s) 136, 170, 493, 1007, 1541
Tru1I TTAA 8 cut(s) 225, 446, 600, 711, 962, 1032, 1223, 1641
Tru9I TTAA 8 cut(s) 225, 446, 600, 711, 962, 1032, 1223, 1641
TscAI CASTG 4 cut(s) 217, 238, 277, 1196
TseFI GTSAC 2 cut(s) 206, 828
TseI GCWGC 9 cut(s) 266, 421, 902, 986, 1256, 1352, 1385, 1388, 1595
Tsp45I GTSAC 2 cut(s) 206, 828
TspRI CASTG 4 cut(s) 217, 238, 277, 1196
VpaK11BI GGWCC 1 cut(s) 1501
VspI ATTAAT 1 cut(s) 962
XagI CCTNNNNNAGG 1 cut(s) 109
XapI RAATTY 2 cut(s) 870, 949
XbaI TCTAGA 1 cut(s) 1625
XceI RCATGY 1 cut(s) 28
XmiI GTMKAC 1 cut(s) 280
XmnI GAANNNNTTC 2 cut(s) 693, 1011
XspI CTAG 3 cut(s) 1133, 1152, 1626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.