Rh7CG093900

HEAT repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0003181
Physical Location & Seq
Forward (+)
7059577 .. 7068779
9203 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG093900.1

Sequence Viewer

Length: 3507 bp
ATGACGGCGTCTGTATCACAATCGCCGGTGCGGTGGTGGCGGACGGCGTTTCTGACGGTGAGAGACGAAACCCTCACGACTCCTCCTCGCACTCCAATCCCCGAACTCCTCCACAGTTTCATCTTCTCCCACTCCCACACTCTCCTTTCCGCCGCCCCCGACCTCCCTCCGCAGGAGGTGACGTCAGATTTGTTGTTCCTAACGGAATTGATAACCACCAAGTCTCACGGCGCCGGCGACTTGACCCCCACCTTCGCTCACATAATTCACCTGATCCATGACGTCAGCCATCGTCTTCCTCTGGAAGTCAATTCAGCTTCGTGGACTCTCATGCTTGACGGTTTCGGCGACATGCTTCAATTTTTCATTGCCTCTTCGTCATTTACGCCCAGCATGGAATGCTTACAGACTCTGAGGCGTGTTATGAGCACCTACCAGAGGAAGTGTTCTCCGGCCGATGAGATTCAGCTGGTGAAGTTCCTTCTGCGCGTAATTGAGAGCTGTCATTCAGAGTTAAGTAGCTCATCGCATTCAATTCGCAACCAGAGCTCTGCTTCTGAAGTTGGAAAGAGAAAGCCATTGCCGCGACATGGCAGCTTATGGGAAGCTCAGACCCTTGCGTTCAATATGCTTGGAGAAACAATCTCTAGGGCCGGCTCGTTGTTTCCCGTGGATATCTGGAAATCATCTATTGAGGTTTTTAGGAAAGTAATGGATGTATTGGCAGCTAAAAGCCTGCTTGTAGAAGATGCTGTAATGTCGAGGTTTTATTTATCTCTCCTGCATTGTCTGCACTTGACTCTCTCAGATCGTAAGTGTTCCCTCTCTGGCCATGTGTCAGGTTTTGTAGCTGCTTTGCGAATGTTCTTGTCCTATGGTATTAGTAGTAGAAGCCAGCTTACCAGGCCGGCAACTGGTCAAAAGGAGAGTGAACTTAGTGTAGCCAGCCTTAAGTCTGGTTTGGAAGATCCTAAAAAGACAGATCGTAGTCCATATAGACCTCCACACCTACGCAAAAGGGACAGTTCAAAGCAGATTGGAGCTCGAGGTTCTCAAGGTTTATCAGATCAGGAATCTTCCACACTTGACTTTGCCTCATCAGATTCAGATTATAGTGACAGTGATGGATCACTTAAAGACACTGAAAGCATTCAGAAGTCGAAGGTCAGAGTAGCTGCCATTGTTTGTATACAGGATCTCTGTCAAGCTGATTCGAAATCATTTAGTAGCCAATGGACACTGCTTTTGCCAACCAGTGATGTACTACAACCTAGGAAGTTTGAAGCAACACTAATGACTTGTTTGCTGTTTGATCCCTATTTGAAGGCACGGGTTGCATCTGCCTCAACTCTGGAAGCAATGTTGGATGGGCCTTCTTCTGTTTTTCTGCAGGTAGCAGAGTTCAAAGAGTCTTCTAAAAGGGGATCTTTTACAGCACTTTCAAGTTCCCTTGGACATATACTAATGCAGCTTCATACAGGTATTTTATACTTAATTCAACGAGAAACTCATAGTAGATTGCTGGCATCCTTGTTCAAGATTCTCATGCTTTTGATATCATCTACACCATATTCAAGAATGCCCGGAGAATTGTTGCCAACAGTTTTTACATCTCTACAAGAAAGGATACAAAATGGGTTTCAGTTTAAAAGTGATCAGACTGGCCTGCTGGTTTCTTCTTTTAGTTGCTTGACTACAGCTCTGAATACCTCACCATCTTCACCGCAAATCAAAGAAATGCTTCAGAGAGAGATATTTAATGGTTTTGCCGAGGCCAAAAAGAAGTCGGGTGTTCTTTTTACGTTGTTTCAATTTTCAGAACAAGTTAGCAACCCGCCAATATGCTTCGAGGCTCTTCAGGCGCTTAGGGCTGTGTCGCACAATTACCCCAGTATAATGTTTTCCTGTTGGGAACAAATTTCCACCATTGTTTATCACCTTTTGAGGGCAGCTACTCCTGAAGTTCCTGCAGGACAATGGAAAGGGCATACTGGAAATTCTGTTGGATTCATTGGGGAAAAACTCATTACAGCTGCTATTAGAGTTTTGGATGAATCTCTTCGTGCAATATCTGGATTTAAAGGAACTGAAGACCCTTTAGACGATAAACTACTTGATGCCCCATTTACTTCTGACTGCATAAGGATGAAGAAAGTTTCATCAGCTCCTTCATATGAACTAGAGAGCTTGGAAAATACTAGAGATGAACCCACATCATGTCAGTCTGGAATTGAGCAGTGGTGTGAGGCAATTGAGAAGCATATGCCTTTAATTCTACAACATACTTCTGCAATGGTGAGAGCTGCCTCAGTTACCTGTTTTGCGGGTATAACTTCTTCTGTGTTCTGCACACTCTCGAAGGAAAAACGGGACTTCATTCTTTCATCTTTAGTTCGTGCTGCCGTACACGGTGATGTACCTTCAGTTAGAGCAGCTGCTTGTCGGGCCATTGGTGTCATTTCATGTTTTCCTCAAGTTTCTCAAAGTGCAGAGATCCTTGATAAGTTTGTTCATGCTGTGGAGAGTAACACTCGTGATCCTTTGGTCTCGGTCCGAATAACTGCTTCTTGGGCTTTGGCAAACATCTGTGATTCTATCCATCATTGTATTGATAATTTTAGCTTGGAAAAGACTGAAGGCTCTCTTAAAATTTCTCAATTATTTACCTTATTGACCGAGTGCGCTTTGCGTCTGACTAAGGATGGAGACAAGATTAAATCAAATGCTGTAAGAGCTCTAGGGAATCTTTCAAGATCTATCAAATGTACAATTGATTTTGAGGCGCCAGGGGATTATGGGAAAGGTTGTCAAAGAGATGTATCAATATCATACTATCCAGCTTCTTTGAGAGATTCGCGTTGGCTTGATAGGGTTGTTCAGGCATTTATTTCTTGTGTTACGACTGGTAATGTCAAGGTCCAATGGAATGTTTGTCATGCTTTGAGCAACCTATTTCTGAACGAGACATTAAGACTGCAAGACATGGATTGGGCTCCATCTGTGTTTAGTATTCTTCTACTACTGTTACGTGATTCTTCCAACTTTAAGATCAGAATCCAAGCAGCTGCTGCTCTGGCTGTTCCAGCATCGGTGCACGATTATGGGGAATCTTTCTCAGACGTCATCCAGGGTCTGGAGCATATATTAGAGAATCAAGGTTCAGACCAGATTGCATCACCATCAAATTTCAAATATAGGGTTGCCCTTGAAAAGCAGTTAACCTCAACCATGTTGCATGTTCTCATCCTCGCTTCAAGCTCTGATCATGAACCAGTGAAAGTTTTTCTTGTAAAAAAAGCCTCATTCTTTGAAGACTGGTTCAAGGCACTGTGCTCATCACTAGGAGAGTCGAGTAGTCAACCGGAACTTGAAAATAAGAAGTCCCTTGAGGACCCAAAGAAAGAGATGATATGCAATGCAATTCGGTCACTAATTCAGCTGTACAATGACAGGAAGCATCATGCAATTGCCGAGAAATTTGAGAAGTTAGAGAAAAGCATACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4042 HEAT

Protein Analysis

1168

Amino Acids

129.42

Weight (kDa)

7.05

Isoelectric Point (pI)

47.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4042 PF13251 388 - 571 2.4e-52 Domain of unknown function (DUF4042)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 185, 285, 3123
Acc36I ACCTGC 1 cut(s) 1381
AccB1I GGYRCC 2 cut(s) 230, 2782
AccB7I CCANNNNNTGG 1 cut(s) 3133
AccI GTMKAC 1 cut(s) 1189
AccII CGCG 3 cut(s) 489, 586, 2857
AciI CCGC 9 cut(s) 31, 40, 150, 153, 170, 584, 1724, 1835, 2324
AclWI GGATC 8 cut(s) 268, 962, 1135, 1203, 1307, 1432, 2488, 2531
AcoI YGGCCR 2 cut(s) 453, 829
AcsI RAATTY 5 cut(s) 1917, 1996, 2649, 3184, 3476
AcuI CTGAAG 7 cut(s) 579, 1727, 1841, 1980, 2109, 2406, 2655
AcyI GRCGYC 6 cut(s) 8, 182, 231, 282, 2783, 3120
AfaI GTAC 5 cut(s) 1263, 2406, 2418, 2767, 3443
AfiI CCNNNNNNNGG 6 cut(s) 172, 438, 590, 914, 1945, 3133
AflII CTTAAG 1 cut(s) 950
AjnI CCWGG 3 cut(s) 902, 2785, 3126
Alw21I GWGCWC 6 cut(s) 431, 551, 1045, 2737, 3096, 3335
Alw26I GTCTC 5 cut(s) 57, 228, 2551, 2700, 2957
Alw44I GTGCAC 1 cut(s) 3092
AlwI GGATC 8 cut(s) 268, 962, 1135, 1203, 1307, 1432, 2488, 2531
AlwNI CAGNNNCTG 3 cut(s) 412, 3068, 3133
Ama87I CYCGRG 1 cut(s) 1044
AoxI GGCC 8 cut(s) 453, 651, 829, 905, 1370, 1663, 1773, 2445
ApaLI GTGCAC 1 cut(s) 3092
ApoI RAATTY 5 cut(s) 1917, 1996, 2649, 3184, 3476
ArsI GACNNNNNNTTYG 4 cut(s) 172, 204, 1228, 1260
Asp700I GAANNNNTTC 3 cut(s) 1149, 1740, 2058
AspA2I CCTAGG 1 cut(s) 1271
AspLEI GCGC 5 cut(s) 233, 489, 1864, 2684, 2785
AspS9I GGNCC 6 cut(s) 651, 1370, 2445, 2551, 2917, 3391
AsuC2I CCSGG 1 cut(s) 1584
AsuII TTCGAA 1 cut(s) 1214
AvaI CYCGRG 1 cut(s) 1044
AvaII GGWCC 3 cut(s) 2551, 2917, 3391
AvrII CCTAGG 1 cut(s) 1271
BaeGI GKGCMC 1 cut(s) 3096
BalI TGGCCA 1 cut(s) 831
BanI GGYRCC 2 cut(s) 230, 2782
BanII GRGCYC 4 cut(s) 551, 1045, 2737, 2995
BarI GAAGNNNNNNTAC 4 cut(s) 883, 915, 2320, 2352
BauI CACGAG 1 cut(s) 2532
BbsI GAAGAC 4 cut(s) 287, 1404, 2097, 3318
Bbv12I GWGCWC 6 cut(s) 431, 551, 1045, 2737, 3096, 3335
BccI CCATC 8 cut(s) 297, 1118, 1361, 1723, 2607, 2696, 3004, 3187
BceAI ACGGC 4 cut(s) 21, 60, 244, 2387
BcgI CGANNNNNNTGC 2 cut(s) 518, 552
BciT130I CCWGG 3 cut(s) 904, 2787, 3128
BciVI GTATCC 1 cut(s) 1620
BclI TGATCA 2 cut(s) 1654, 3262
BcnI CCSGG 1 cut(s) 1584
BcoDI GTCTC 5 cut(s) 57, 228, 2551, 2700, 2957
BfaI CTAG 6 cut(s) 648, 1272, 2180, 2199, 2738, 3341
BfmI CTRYAG 3 cut(s) 1388, 1695, 1968
BfoI RGCGCY 3 cut(s) 234, 1865, 2786
BfrI CTTAAG 1 cut(s) 950
BfuAI ACCTGC 1 cut(s) 1381
BfuI GTATCC 1 cut(s) 1620
BglII AGATCT 1 cut(s) 2753
BlnI CCTAGG 1 cut(s) 1271
Bme1390I CCNGG 4 cut(s) 904, 1584, 2787, 3128
Bme18I GGWCC 3 cut(s) 2551, 2917, 3391
BmeT110I CYCGRG 1 cut(s) 1044
BmgT120I GGNCC 6 cut(s) 651, 1370, 2445, 2551, 2917, 3391
BmiI GGNNCC 4 cut(s) 232, 2784, 2994, 3393
BmrFI CCNGG 4 cut(s) 904, 1584, 2787, 3128
BmrI ACTGGG 1 cut(s) 1884
BmsI GCATC 7 cut(s) 739, 1346, 1535, 2107, 3095, 3182, 3466
BmuI ACTGGG 1 cut(s) 1884
BpiI GAAGAC 4 cut(s) 287, 1404, 2097, 3318
BplI GAGNNNNNCTC 2 cut(s) 2515, 2547
BpmI CTGGAG 1 cut(s) 3155
Bpu10I CCTNAGC 1 cut(s) 1865
Bpu14I TTCGAA 1 cut(s) 1214
BpuEI CTTGAG 3 cut(s) 1038, 2457, 3407
BpuMI CCSGG 1 cut(s) 1584
BsaAI YACGTR 1 cut(s) 3029
BsaBI GATNNNNATC 1 cut(s) 3053
BsaHI GRCGYC 6 cut(s) 8, 182, 231, 282, 2783, 3120
BsaI GGTCTC 1 cut(s) 2551
BsaJI CCNNGG 6 cut(s) 669, 1271, 1450, 1770, 2786, 3127
BsaWI WCCGGW 1 cut(s) 3361
BsaXI ACNNNNNCTCC 4 cut(s) 67, 97, 167, 197
Bsc4I CCNNNNNNNGG 6 cut(s) 172, 438, 590, 914, 1945, 3133
Bse118I RCCGGY 4 cut(s) 25, 233, 653, 907
Bse1I ACTGG 8 cut(s) 919, 1254, 1666, 1890, 1996, 2908, 3272, 3320
Bse3DI GCAATG 5 cut(s) 366, 578, 1365, 2298, 3421
Bse8I GATNNNNATC 1 cut(s) 3053
BseBI CCWGG 3 cut(s) 904, 2787, 3128
BseDI CCNNGG 6 cut(s) 669, 1271, 1450, 1770, 2786, 3127
BseGI GGATG 8 cut(s) 721, 1372, 1526, 2056, 2151, 2707, 3123, 3243
BseJI GATNNNNATC 1 cut(s) 3053
BseLI CCNNNNNNNGG 6 cut(s) 172, 438, 590, 914, 1945, 3133
BseMI GCAATG 5 cut(s) 366, 578, 1365, 2298, 3421
BseMII CTCAG 5 cut(s) 404, 623, 819, 2322, 3129
BseNI ACTGG 8 cut(s) 919, 1254, 1666, 1890, 1996, 2908, 3272, 3320
BseRI GAGGAG 3 cut(s) 72, 75, 98
BseSI GKGCMC 1 cut(s) 3096
BseX3I CGGCCG 1 cut(s) 453
BseYI CCCAGC 1 cut(s) 389
BsgI GTGCAG 3 cut(s) 776, 2332, 2508
Bsh1236I CGCG 3 cut(s) 489, 586, 2857
Bsh1285I CGRYCG 1 cut(s) 456
BshFI GGCC 8 cut(s) 455, 653, 831, 907, 1372, 1665, 1775, 2447
BshNI GGYRCC 2 cut(s) 230, 2782
BsiEI CGRYCG 1 cut(s) 456
BsiHKAI GWGCWC 6 cut(s) 431, 551, 1045, 2737, 3096, 3335
BsiHKCI CYCGRG 1 cut(s) 1044
BsiSI CCGG 7 cut(s) 26, 234, 452, 654, 908, 1584, 3362
BslFI GGGAC 3 cut(s) 1034, 2384, 3367
BslI CCNNNNNNNGG 6 cut(s) 172, 438, 590, 914, 1945, 3133
BsmAI GTCTC 5 cut(s) 57, 228, 2551, 2700, 2957
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 3 cut(s) 1034, 2384, 3367
BsmI GAATGC 4 cut(s) 404, 529, 1149, 1584
BsnI GGCC 8 cut(s) 455, 653, 831, 907, 1372, 1665, 1775, 2447
Bso31I GGTCTC 1 cut(s) 2551
BsoBI CYCGRG 1 cut(s) 1044
Bsp119I TTCGAA 1 cut(s) 1214
Bsp1286I GDGCHC 7 cut(s) 431, 551, 1045, 2737, 2995, 3096, 3335
Bsp1407I TGTACA 2 cut(s) 2765, 3441
BspACI CCGC 9 cut(s) 31, 40, 150, 153, 170, 584, 1724, 1835, 2324
BspANI GGCC 8 cut(s) 455, 653, 831, 907, 1372, 1665, 1775, 2447
BspCNI CTCAG 5 cut(s) 405, 622, 818, 2321, 3128
BspFNI CGCG 3 cut(s) 489, 586, 2857
BspHI TCATGA 1 cut(s) 3265
BspLI GGNNCC 4 cut(s) 232, 2784, 2994, 3393
BspMAI CTGCAG 2 cut(s) 1392, 1972
BspMI ACCTGC 1 cut(s) 1381
BspPI GGATC 8 cut(s) 268, 962, 1135, 1203, 1307, 1432, 2488, 2531
BspQI GCTCTTC 1 cut(s) 1860
BspT104I TTCGAA 1 cut(s) 1214
BspT107I GGYRCC 2 cut(s) 230, 2782
BspTI CTTAAG 1 cut(s) 950
BspTNI GGTCTC 1 cut(s) 2551
BsrDI GCAATG 5 cut(s) 366, 578, 1365, 2298, 3421
BsrFI RCCGGY 4 cut(s) 25, 233, 653, 907
BsrGI TGTACA 2 cut(s) 2765, 3441
BsrI ACTGG 8 cut(s) 919, 1254, 1666, 1890, 1996, 2908, 3272, 3320
BssAI RCCGGY 4 cut(s) 25, 233, 653, 907
BssECI CCNNGG 6 cut(s) 669, 1271, 1450, 1770, 2786, 3127
BssNAI GTATAC 1 cut(s) 1190
BssNI GRCGYC 6 cut(s) 8, 182, 231, 282, 2783, 3120
BssSI CACGAG 1 cut(s) 2532
BssT1I CCWWGG 2 cut(s) 1271, 1450
Bst1107I GTATAC 1 cut(s) 1190
Bst2BI CACGAG 1 cut(s) 2532
Bst2UI CCWGG 3 cut(s) 904, 2787, 3128
Bst6I CTCTTC 3 cut(s) 379, 1860, 2064
BstACI GRCGYC 6 cut(s) 8, 182, 231, 282, 2783, 3120
BstAFI CTTAAG 1 cut(s) 950
BstAPI GCANNNNNTGC 4 cut(s) 399, 790, 1334, 3068
BstAUI TGTACA 2 cut(s) 2765, 3441
BstBAI YACGTR 1 cut(s) 3029
BstBI TTCGAA 1 cut(s) 1214
BstC8I GCNNGC 8 cut(s) 235, 655, 737, 896, 909, 946, 1524, 1667
BstDEI CTNAG 8 cut(s) 413, 609, 805, 935, 1865, 2308, 2697, 3115
BstDSI CCRYGG 1 cut(s) 669
BstENI CCTNNNNNAGG 1 cut(s) 436
BstF5I GGATG 8 cut(s) 721, 1372, 1526, 2056, 2151, 2707, 3123, 3243
BstFNI CGCG 3 cut(s) 489, 586, 2857
BstH2I RGCGCY 3 cut(s) 234, 1865, 2786
BstHHI GCGC 5 cut(s) 233, 489, 1864, 2684, 2785
BstMAI GTCTC 5 cut(s) 57, 228, 2551, 2700, 2957
BstMCI CGRYCG 1 cut(s) 456
BstNI CCWGG 3 cut(s) 904, 2787, 3128
BstNSI RCATGY 2 cut(s) 355, 3239
BstSCI CCNGG 4 cut(s) 902, 1582, 2785, 3126
BstSFI CTRYAG 3 cut(s) 1388, 1695, 1968
BstSLI GKGCMC 1 cut(s) 3096
BstUI CGCG 3 cut(s) 489, 586, 2857
BstV2I GAAGAC 4 cut(s) 287, 1404, 2097, 3318
BstX2I RGATCY 5 cut(s) 967, 1195, 1424, 2493, 2753
BstYI RGATCY 5 cut(s) 967, 1195, 1424, 2493, 2753
BstZ17I GTATAC 1 cut(s) 1190
BstZI CGGCCG 1 cut(s) 453
BsuI GTATCC 1 cut(s) 1620
BsuRI GGCC 8 cut(s) 455, 653, 831, 907, 1372, 1665, 1775, 2447
BtgI CCRYGG 1 cut(s) 669
BtgZI GCGATG 1 cut(s) 510
BtsCI GGATG 8 cut(s) 721, 1372, 1526, 2056, 2151, 2707, 3123, 3243
BtsI GCAGTG 2 cut(s) 1238, 2243
BtsIMutI CAGTG 7 cut(s) 1126, 1140, 1238, 1261, 2243, 3279, 3326
BveI ACCTGC 1 cut(s) 1381
Cac8I GCNNGC 8 cut(s) 235, 655, 737, 896, 909, 946, 1524, 1667
CaiI CAGNNNCTG 3 cut(s) 412, 3068, 3133
CciI TCATGA 1 cut(s) 3265
CfoI GCGC 5 cut(s) 233, 489, 1864, 2684, 2785
Cfr10I RCCGGY 4 cut(s) 25, 233, 653, 907
Cfr13I GGNCC 6 cut(s) 651, 1370, 2445, 2551, 2917, 3391
CpoI CGGWCCG 1 cut(s) 2551
CseI GACGC 1 cut(s) 2678
Csp6I GTAC 5 cut(s) 1262, 2405, 2417, 2766, 3442
CspI CGGWCCG 1 cut(s) 2551
CviQI GTAC 5 cut(s) 1262, 2405, 2417, 2766, 3442
DdeI CTNAG 8 cut(s) 413, 609, 805, 935, 1865, 2308, 2697, 3115
DinI GGCGCC 2 cut(s) 232, 2784
DraI TTTAAA 2 cut(s) 1648, 2080
EaeI YGGCCR 2 cut(s) 453, 829
EagI CGGCCG 1 cut(s) 453
Eam1104I CTCTTC 3 cut(s) 379, 1860, 2064
EarI CTCTTC 3 cut(s) 379, 1860, 2064
EciI GGCGGA 2 cut(s) 55, 139
Ecl136II GAGCTC 3 cut(s) 549, 1043, 2735
EclXI CGGCCG 1 cut(s) 453
Eco130I CCWWGG 2 cut(s) 1271, 1450
Eco24I GRGCYC 4 cut(s) 551, 1045, 2737, 2995
Eco31I GGTCTC 1 cut(s) 2551
Eco32I GATATC 2 cut(s) 676, 1557
Eco47I GGWCC 3 cut(s) 2551, 2917, 3391
Eco52I CGGCCG 1 cut(s) 453
Eco53kI GAGCTC 3 cut(s) 549, 1043, 2735
Eco57I CTGAAG 7 cut(s) 579, 1727, 1841, 1980, 2109, 2406, 2655
Eco88I CYCGRG 1 cut(s) 1044
EcoICRI GAGCTC 3 cut(s) 549, 1043, 2735
EcoNI CCTNNNNNAGG 1 cut(s) 436
EcoO109I RGGNCCY 1 cut(s) 3391
EcoRII CCWGG 3 cut(s) 902, 2785, 3126
EcoRV GATATC 2 cut(s) 676, 1557
EcoT14I CCWWGG 2 cut(s) 1271, 1450
EcoT38I GRGCYC 4 cut(s) 551, 1045, 2737, 2995
EgeI GGCGCC 2 cut(s) 232, 2784
EheI GGCGCC 2 cut(s) 232, 2784
ErhI CCWWGG 2 cut(s) 1271, 1450
Esp3I CGTCTC 1 cut(s) 57
FalI AAGNNNNNCTT 8 cut(s) 1411, 1443, 1725, 1757, 2628, 2660, 3270, 3302
FaqI GGGAC 3 cut(s) 1034, 2384, 3367
FauI CCCGC 2 cut(s) 1842, 2317
FauNDI CATATG 2 cut(s) 2173, 2262
FbaI TGATCA 2 cut(s) 1654, 3262
FblI GTMKAC 1 cut(s) 1189
FokI GGATG 8 cut(s) 728, 1379, 1513, 2063, 2158, 2714, 3110, 3230
FriOI GRGCYC 4 cut(s) 551, 1045, 2737, 2995
FspBI CTAG 6 cut(s) 648, 1272, 2180, 2199, 2738, 3341
GlaI GCGC 5 cut(s) 232, 488, 1863, 2683, 2784
GsaI CCCAGC 1 cut(s) 393
GsuI CTGGAG 1 cut(s) 3155
HaeII RGCGCY 3 cut(s) 234, 1865, 2786
HaeIII GGCC 8 cut(s) 455, 653, 831, 907, 1372, 1665, 1775, 2447
HapII CCGG 7 cut(s) 26, 234, 452, 654, 908, 1584, 3362
HgaI GACGC 1 cut(s) 2678
HhaI GCGC 5 cut(s) 233, 489, 1864, 2684, 2785
Hin1I GRCGYC 6 cut(s) 8, 182, 231, 282, 2783, 3120
Hin6I GCGC 5 cut(s) 231, 487, 1862, 2682, 2783
HinP1I GCGC 5 cut(s) 231, 487, 1862, 2682, 2783
HincII GTYRAC 2 cut(s) 3219, 3359
HindII GTYRAC 2 cut(s) 3219, 3359
HpaI GTTAAC 1 cut(s) 3219
HpaII CCGG 7 cut(s) 26, 234, 452, 654, 908, 1584, 3362
Hpy166II GTNNAC 7 cut(s) 324, 932, 1190, 2407, 3094, 3219, 3359
Hpy8I GTNNAC 7 cut(s) 324, 932, 1190, 2407, 3094, 3219, 3359
HpyAV CCTTC 9 cut(s) 262, 491, 1156, 1318, 1383, 2178, 2353, 2430, 2630
HpyCH4IV ACGT 5 cut(s) 182, 282, 1802, 3028, 3120
HpyF3I CTNAG 8 cut(s) 413, 609, 805, 935, 1865, 2308, 2697, 3115
HpySE526I ACGT 5 cut(s) 182, 282, 1802, 3028, 3120
Hsp92I GRCGYC 6 cut(s) 8, 182, 231, 282, 2783, 3120
HspAI GCGC 5 cut(s) 231, 487, 1862, 2682, 2783
KasI GGCGCC 2 cut(s) 230, 2782
KroI GCCGGC 3 cut(s) 233, 653, 907
KroNI GCCGGC 3 cut(s) 235, 655, 909
Ksp22I TGATCA 2 cut(s) 1654, 3262
KspAI GTTAAC 1 cut(s) 3219
LguI GCTCTTC 1 cut(s) 1860
LmnI GCTCC 4 cut(s) 1040, 2170, 2998, 3136
LweI GCATC 7 cut(s) 739, 1346, 1535, 2107, 3095, 3182, 3466
MaeI CTAG 6 cut(s) 648, 1272, 2180, 2199, 2738, 3341
MaeII ACGT 5 cut(s) 182, 282, 1802, 3028, 3120
MaeIII GTNAC 7 cut(s) 178, 1115, 2311, 2525, 2896, 3024, 3426
MfeI CAATTG 3 cut(s) 2250, 2769, 3465
MflI RGATCY 5 cut(s) 967, 1195, 1424, 2493, 2753
MhlI GDGCHC 7 cut(s) 431, 551, 1045, 2737, 2995, 3096, 3335
MlsI TGGCCA 1 cut(s) 831
MluNI TGGCCA 1 cut(s) 831
Mly113I GGCGCC 2 cut(s) 231, 2783
MlyI GAGTC 6 cut(s) 73, 319, 403, 793, 1418, 3356
MmeI TCCRAC 4 cut(s) 544, 1344, 1984, 3063
Mox20I TGGCCA 1 cut(s) 831
MreI CGCCGGCG 1 cut(s) 233
MroNI GCCGGC 3 cut(s) 233, 653, 907
MroXI GAANNNNTTC 3 cut(s) 1149, 1740, 2058
MscI TGGCCA 1 cut(s) 831
MslI CAYNNNNRTG 3 cut(s) 2144, 2412, 3099
Msp20I TGGCCA 1 cut(s) 831
MspA1I CMGCKG 5 cut(s) 469, 2033, 2435, 3065, 3439
MspCI CTTAAG 1 cut(s) 950
MspI CCGG 7 cut(s) 26, 234, 452, 654, 908, 1584, 3362
MspR9I CCNGG 4 cut(s) 904, 1584, 2787, 3128
MunI CAATTG 3 cut(s) 2250, 2769, 3465
Mva1269I GAATGC 4 cut(s) 404, 529, 1149, 1584
MvaI CCWGG 3 cut(s) 904, 2787, 3128
MvnI CGCG 3 cut(s) 489, 586, 2857
NaeI GCCGGC 3 cut(s) 235, 655, 909
NarI GGCGCC 2 cut(s) 231, 2783
NciI CCSGG 1 cut(s) 1584
NdeI CATATG 2 cut(s) 2173, 2262
NgoMIV GCCGGC 3 cut(s) 233, 653, 907
NlaIV GGNNCC 4 cut(s) 232, 2784, 2994, 3393
NmeAIII GCCGAG 2 cut(s) 1795, 3496
NmuCI GTSAC 3 cut(s) 178, 1115, 3426
NspI RCATGY 2 cut(s) 355, 3239
NspV TTCGAA 1 cut(s) 1214
PaeR7I CTCGAG 1 cut(s) 1044
PagI TCATGA 1 cut(s) 3265
PciSI GCTCTTC 1 cut(s) 1860
PcsI WCGNNNNNNNCGW 2 cut(s) 234, 345
PctI GAATGC 4 cut(s) 404, 529, 1149, 1584
PdiI GCCGGC 3 cut(s) 235, 655, 909
PdmI GAANNNNTTC 3 cut(s) 1149, 1740, 2058
PflFI GACNNNGTC 1 cut(s) 7
PflMI CCANNNNNTGG 1 cut(s) 3133
PleI GAGTC 6 cut(s) 73, 319, 403, 793, 1417, 3355
PluTI GGCGCC 2 cut(s) 234, 2786
PpsI GAGTC 6 cut(s) 73, 319, 403, 793, 1417, 3355
Ppu21I YACGTR 1 cut(s) 3029
PpuMI RGGWCCY 1 cut(s) 3391
Psp124BI GAGCTC 3 cut(s) 551, 1045, 2737
Psp5II RGGWCCY 1 cut(s) 3391
Psp6I CCWGG 3 cut(s) 902, 2785, 3126
PspFI CCCAGC 1 cut(s) 389
PspGI CCWGG 3 cut(s) 902, 2785, 3126
PspN4I GGNNCC 4 cut(s) 232, 2784, 2994, 3393
PspPI GGNCC 6 cut(s) 651, 1370, 2445, 2551, 2917, 3391
PspPPI RGGWCCY 1 cut(s) 3391
PspXI VCTCGAGB 1 cut(s) 1044
PstI CTGCAG 2 cut(s) 1392, 1972
PstNI CAGNNNCTG 3 cut(s) 412, 3068, 3133
PsuI RGATCY 5 cut(s) 967, 1195, 1424, 2493, 2753
PsyI GACNNNGTC 1 cut(s) 7
PvuII CAGCTG 5 cut(s) 469, 2033, 2435, 3065, 3439
RsaI GTAC 5 cut(s) 1263, 2406, 2418, 2767, 3443
RsaNI GTAC 5 cut(s) 1262, 2405, 2417, 2766, 3442
RseI CAYNNNNRTG 3 cut(s) 2144, 2412, 3099
Rsr2I CGGWCCG 1 cut(s) 2551
RsrII CGGWCCG 1 cut(s) 2551
SacI GAGCTC 3 cut(s) 551, 1045, 2737
SapI GCTCTTC 1 cut(s) 1860
Sau96I GGNCC 6 cut(s) 651, 1370, 2445, 2551, 2917, 3391
SbfI CCTGCAGG 1 cut(s) 1972
SchI GAGTC 6 cut(s) 73, 319, 403, 793, 1418, 3356
ScrFI CCNGG 4 cut(s) 904, 1584, 2787, 3128
SdaI CCTGCAGG 1 cut(s) 1972
SduI GDGCHC 7 cut(s) 431, 551, 1045, 2737, 2995, 3096, 3335
SfaNI GCATC 7 cut(s) 739, 1346, 1535, 2107, 3095, 3182, 3466
SfcI CTRYAG 3 cut(s) 1388, 1695, 1968
SfoI GGCGCC 2 cut(s) 232, 2784
Sfr274I CTCGAG 1 cut(s) 1044
SfuI TTCGAA 1 cut(s) 1214
SgrAI CRCCGGYG 2 cut(s) 25, 233
SinI GGWCC 3 cut(s) 2551, 2917, 3391
SlaI CTCGAG 1 cut(s) 1044
SmiMI CAYNNNNRTG 3 cut(s) 2144, 2412, 3099
SmlI CTYRAG 5 cut(s) 950, 1044, 1053, 2472, 3386
SmoI CTYRAG 5 cut(s) 950, 1044, 1053, 2472, 3386
Sse8387I CCTGCAGG 1 cut(s) 1972
SsiI CCGC 9 cut(s) 31, 40, 150, 153, 170, 584, 1724, 1835, 2324
SspDI GGCGCC 2 cut(s) 230, 2782
SspMI CTAG 6 cut(s) 648, 1272, 2180, 2199, 2738, 3341
SstI GAGCTC 3 cut(s) 551, 1045, 2737
StyD4I CCNGG 4 cut(s) 902, 1582, 2785, 3126
StyI CCWWGG 2 cut(s) 1271, 1450
TaiI ACGT 5 cut(s) 185, 285, 1805, 3031, 3123
TaqI TCGA 7 cut(s) 761, 1045, 1160, 1214, 1848, 2357, 3350
TaqII GACCGA 3 cut(s) 2539, 2690, 3414
TatI WGTACW 3 cut(s) 1261, 2765, 3441
TauI GCSGC 2 cut(s) 155, 586
TscAI CASTG 7 cut(s) 1126, 1147, 1245, 1261, 2243, 3279, 3333
TseFI GTSAC 3 cut(s) 178, 1115, 3426
Tsp45I GTSAC 3 cut(s) 178, 1115, 3426
TspGWI ACGGA 1 cut(s) 218
TspRI CASTG 7 cut(s) 1126, 1147, 1245, 1261, 2243, 3279, 3333
Tth111I GACNNNGTC 1 cut(s) 7
Van91I CCANNNNNTGG 1 cut(s) 3133
Vha464I CTTAAG 1 cut(s) 950
VneI GTGCAC 1 cut(s) 3092
VpaK11BI GGWCC 3 cut(s) 2551, 2917, 3391
XagI CCTNNNNNAGG 1 cut(s) 436
XapI RAATTY 5 cut(s) 1917, 1996, 2649, 3184, 3476
XceI RCATGY 2 cut(s) 355, 3239
XhoI CTCGAG 1 cut(s) 1044
XmaJI CCTAGG 1 cut(s) 1271
XmiI GTMKAC 1 cut(s) 1189
XmnI GAANNNNTTC 3 cut(s) 1149, 1740, 2058
XspI CTAG 6 cut(s) 648, 1272, 2180, 2199, 2738, 3341
ZraI GACGTC 3 cut(s) 183, 283, 3121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.