Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0002216

Physical Location & Seq

Genomic Coordinates Reverse (-)

20009917 .. 20012973

Gene Structure 3057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1243600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGGCGAACCCTAACCCTGCTTCCAAACAGCACCTCTACCCGGAGATCATCCACTCGAACCCAGAAGCACCTTCAATCCCTACCTCCTCAGCCCCAAATCTCTACCCTTCCCTCGACATGAAAGACCTCTACGAAAATCTATTCCCCGAAAGCCCTAACCCTACCTACCAATACCACCCCTCTGCTCCGCCTGAGGCATCGGCTCCACCCGAGGCTCCACCGTCGGCACCACCTGTGGCCACCGAAGAGGTCCTCATCAAAATCCCCGGCGCCATTGTTAATTTAATCGACACGCACTACAGTGTTGAGCTCGCCTCCGGCGACTTCACGATCATACGCCTCGTCCAGGGCGATGACATCGTCGCCATCCTCGCCCGAGTCGGCGACGAGATCCAGTGGCCTCTGGCTAAGGACGAAGGCGCCGTGAAGCTCGACGACTCGCATTACTTCTTCTCTCTCTACGCCCCGCCGGATTCCGACTCCGGGCCCGGATCGGACGCGAAAGCGAAGACAAACGATCCGGACAATTTTTTGAACTACGGATTGACGATTGCGTCGAAAGGGCAGGAGGGATTAGTGAAGGAATTGGATGGGATTTTGAAGAGTTACTGCAGTTTTTCGGTTCAGAAGGTTTCGGATAAGGCGAAGAAGAAAGGGGAAGCGTTGGACGATACCCTGGCGTTGGAGACCTCGCCGGAGGAGTTGAGCTCGGAGAAGAAGAAGGAGTTGGAGGAGCGGAGCGCCGCATATTGGACCACATTGGCGCCGAATGTGGAGGATTACAATGGGAGGGCTGCCAAGTTGATCGCAGCGGGGTCGGGCCAGCTGATCAAGGGCATATTGTGGTGTGGGGATGTGACGGTGGAGAGGTTGAAGTTGGGGAATGAGGTTATGAAGAAGCGGATGGACCCGCGGTCGAACAAGGAAGTCAGTCCCCAAACCATGAGGAGGATTAAAAGGGTTAAGAAGGTGAGCAAAACGACACAGAAAGTTGCAGCTGGTGTCCTTTCTGGGGTTTTGAAAGTTTCCGGATACTTAACAAGTTCGGTGGTAAATTCCAAACTGGGAAAGAAGTTCTTCCGTCATCTGCCTGGGGAAATTTTGCTAGCATCGCTGGATGGATTTTGCAAAGTGTGCGATGCTGTTGAAGTAGCCGGGAAAAATGTCATGTCAACGTCATCTACTGTAACAACTGACCTCGTCTCCCACAGGTATGGTGAACAAGCAGGTAAGGCTGCAAACGACGGGCTTGATGCAGCAGGACATGCTGTCGGAACTGCGTGGACTGTTTTTAAAATACGAAAAGCACTCAACCCAAAAAGCGCTTTCAAATCCACCACCCTAGCCAAATCTGCTGCTAAGGCAGCAGCTGAGGAGGAAAGAACTAAGAAATCCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006970 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009642 GO:0009644 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0016020 GO:0030054 GO:0033993 GO:0042221 GO:0043207 GO:0044464 GO:0048511 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Senescence

Protein Analysis

467

Amino Acids

50.17

Weight (kDa)

7.62

Isoelectric Point (pI)

34.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Senescence	PF06911	268 - 454	2.4e-50	Senescence domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002216)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17840 AT2G17840 AT3G51250 AT3G51250 AT4G35985 AT4G35985 AT4G35985
fragaria_vesca	FvH4_1g11540 FvH4_1g11540 FvH4_1g11540 FvH4_1g11540 FvH4_2g01340 FvH4_2g01340 FvH4_2g01340
malus_domestica	MD02G1128400.v1.1 MD10G1123700.v1.1 MD15G1243600.v1.1
prunus_persica	Prupe.7G170600_v2.0.a1 Prupe.8G164100_v2.0.a1
pyrus_communis	pycom10g10590 pycom15g21450
rosa_chinensis	RchiOBHm_Chr2g0099181 RchiOBHm_Chr6g0252261
rosa_laevigata	RLG00000015400 RLG00000016853
rosa_multiflora	Rmu_co7982236.1_g000001 Rmu_sc0006252.1_g000017 Rmu_sc0006878.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143380 Rroxscaffold_7G00216200
rosa_rugosa	Rorug02G0077500 Rorug05G0506500 Rorug05G0506600
rosa_samantha	Rh2AG126400 Rh2BG129600 Rh2CG130600 Rh2DG131000 Rh6AG020300 Rh6BG015900 Rh6CG013100 Rh6DG014400
rosa_wichuraiana	Rw2G009750 Rw6G001670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	553
Acc36I	ACCTGC	1 cut(s)	1217
AccB1I	GGYRCC	4 cut(s)	226, 269, 419, 763
AccBSI	CCGCTC	1 cut(s)	736
AccII	CGCG	2 cut(s)	500, 913
AccIII	TCCGGA	2 cut(s)	520, 1028
AciI	CCGC	8 cut(s)	188, 467, 736, 744, 812, 901, 911, 913
AclWI	GGATC	3 cut(s)	385, 499, 512
AcoI	YGGCCR	1 cut(s)	237
AcsI	RAATTY	2 cut(s)	1054, 1098
AcyI	GRCGYC	3 cut(s)	270, 420, 764
AfeI	AGCGCT	1 cut(s)	1324
AfiI	CCNNNNNNNGG	7 cut(s)	40, 346, 483, 682, 750, 948, 1012
AgsI	TTSAA	7 cut(s)	75, 535, 601, 874, 1021, 1148, 1330
AhdI	GACNNNNNGTC	2 cut(s)	913, 1268
AjnI	CCWGG	3 cut(s)	345, 675, 1090
AjuI	GAANNNNNNNTTGG	2 cut(s)	710, 742
AleI	CACNNNNGTG	1 cut(s)	300
AluBI	AGCT	6 cut(s)	310, 430, 708, 826, 998, 1370
AluI	AGCT	6 cut(s)	310, 430, 708, 826, 998, 1370
Alw21I	GWGCWC	2 cut(s)	312, 710
Alw26I	GTCTC	2 cut(s)	680, 1207
AlwI	GGATC	3 cut(s)	385, 499, 512
AlwNI	CAGNNNCTG	1 cut(s)	1370
Ama87I	CYCGRG	2 cut(s)	209, 375
Aor13HI	TCCGGA	2 cut(s)	520, 1028
Aor51HI	AGCGCT	1 cut(s)	1324
AoxI	GGCC	4 cut(s)	237, 398, 485, 820
ApaI	GGGCCC	1 cut(s)	489
ApeKI	GCWGC	8 cut(s)	794, 809, 995, 1235, 1256, 1355, 1364, 1367
ApoI	RAATTY	2 cut(s)	1054, 1098
Asp700I	GAANNNNTTC	1 cut(s)	1076
AspLEI	GCGC	5 cut(s)	272, 422, 743, 766, 1325
AspS9I	GGNCC	6 cut(s)	250, 485, 486, 753, 820, 907
AsuC2I	CCSGG	5 cut(s)	41, 267, 484, 489, 1156
AsuHPI	GGTGA	2 cut(s)	982, 1229
AsuNHI	GCTAGC	1 cut(s)	1105
AvaI	CYCGRG	2 cut(s)	209, 375
AvaII	GGWCC	3 cut(s)	250, 753, 907
AxyI	CCTNAGG	1 cut(s)	192
BaeGI	GKGCMC	1 cut(s)	489
BalI	TGGCCA	1 cut(s)	239
BanI	GGYRCC	4 cut(s)	226, 269, 419, 763
BanII	GRGCYC	3 cut(s)	312, 489, 710
BbsI	GAAGAC	1 cut(s)	515
Bbv12I	GWGCWC	2 cut(s)	312, 710
BbvCI	CCTCAGC	2 cut(s)	88, 1371
BbvI	GCAGC	8 cut(s)	781, 821, 1007, 1222, 1268, 1342, 1376, 1379
BccI	CCATC	4 cut(s)	374, 584, 898, 1112
BceAI	ACGGC	1 cut(s)	407
BcgI	CGANNNNNNTGC	2 cut(s)	798, 832
BciT130I	CCWGG	3 cut(s)	347, 677, 1092
BciVI	GTATCC	1 cut(s)	1025
BclI	TGATCA	1 cut(s)	828
BcnI	CCSGG	5 cut(s)	41, 267, 484, 489, 1156
BcoDI	GTCTC	2 cut(s)	680, 1207
BfaI	CTAG	2 cut(s)	1106, 1343
BfmI	CTRYAG	2 cut(s)	298, 610
BfoI	RGCGCY	5 cut(s)	273, 423, 744, 767, 1326
BfuAI	ACCTGC	1 cut(s)	1217
BfuI	GTATCC	1 cut(s)	1025
BisI	GCNGC	9 cut(s)	744, 795, 810, 996, 1236, 1257, 1356, 1365, 1368
BlsI	GCNGC	9 cut(s)	745, 796, 811, 997, 1237, 1258, 1357, 1366, 1369
Bme1390I	CCNGG	8 cut(s)	41, 267, 347, 484, 489, 677, 1092, 1156
Bme18I	GGWCC	3 cut(s)	250, 753, 907
BmeRI	GACNNNNNGTC	2 cut(s)	913, 1268
BmeT110I	CYCGRG	2 cut(s)	209, 375
BmgT120I	GGNCC	6 cut(s)	250, 485, 486, 753, 820, 907
BmiI	GGNNCC	8 cut(s)	204, 216, 228, 271, 421, 487, 765, 909
BmrFI	CCNGG	8 cut(s)	41, 267, 347, 484, 489, 677, 1092, 1156
BmrI	ACTGGG	1 cut(s)	1073
BmsI	GCATC	4 cut(s)	206, 1118, 1129, 1243
BmtI	GCTAGC	1 cut(s)	1109
BmuI	ACTGGG	1 cut(s)	1073
BpiI	GAAGAC	1 cut(s)	515
BplI	GAGNNNNNCTC	4 cut(s)	299, 331, 692, 724
Bpu10I	CCTNAGC	4 cut(s)	88, 408, 1359, 1371
BpuMI	CCSGG	5 cut(s)	41, 267, 484, 489, 1156
BsaHI	GRCGYC	3 cut(s)	270, 420, 764
BsaI	GGTCTC	1 cut(s)	680
BsaJI	CCNNGG	6 cut(s)	210, 265, 346, 675, 911, 1091
BsaWI	WCCGGW	2 cut(s)	520, 1028
BsaXI	ACNNNNNCTCC	2 cut(s)	1187, 1217
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 346, 483, 682, 750, 948, 1012
Bse1I	ACTGG	2 cut(s)	394, 1068
Bse21I	CCTNAGG	1 cut(s)	192
BseAI	TCCGGA	2 cut(s)	520, 1028
BseBI	CCWGG	3 cut(s)	347, 677, 1092
BseDI	CCNNGG	6 cut(s)	210, 265, 346, 675, 911, 1091
BseGI	GGATG	6 cut(s)	48, 366, 595, 859, 909, 1123
BseLI	CCNNNNNNNGG	7 cut(s)	40, 346, 483, 682, 750, 948, 1012
BseMII	CTCAG	3 cut(s)	102, 183, 1362
BseNI	ACTGG	2 cut(s)	394, 1068
BseRI	GAGGAG	5 cut(s)	76, 713, 746, 961, 1388
BseSI	GKGCMC	1 cut(s)	489
BseXI	GCAGC	8 cut(s)	781, 821, 1007, 1222, 1268, 1342, 1376, 1379
Bsh1236I	CGCG	2 cut(s)	500, 913
Bsh1285I	CGRYCG	1 cut(s)	917
BshFI	GGCC	4 cut(s)	239, 400, 487, 822
BshNI	GGYRCC	4 cut(s)	226, 269, 419, 763
BsiEI	CGRYCG	1 cut(s)	917
BsiHKAI	GWGCWC	2 cut(s)	312, 710
BsiHKCI	CYCGRG	2 cut(s)	209, 375
BslFI	GGGAC	1 cut(s)	918
BslI	CCNNNNNNNGG	7 cut(s)	40, 346, 483, 682, 750, 948, 1012
BsmAI	GTCTC	2 cut(s)	680, 1207
BsmBI	CGTCTC	1 cut(s)	1207
BsmFI	GGGAC	1 cut(s)	918
BsnI	GGCC	4 cut(s)	239, 400, 487, 822
Bso31I	GGTCTC	1 cut(s)	680
BsoBI	CYCGRG	2 cut(s)	209, 375
Bsp120I	GGGCCC	1 cut(s)	485
Bsp1286I	GDGCHC	3 cut(s)	312, 489, 710
Bsp13I	TCCGGA	2 cut(s)	520, 1028
Bsp143I	GATC	7 cut(s)	45, 330, 390, 491, 517, 804, 828
BspACI	CCGC	8 cut(s)	188, 467, 736, 744, 812, 901, 911, 913
BspANI	GGCC	4 cut(s)	239, 400, 487, 822
BspCNI	CTCAG	3 cut(s)	101, 184, 1363
BspEI	TCCGGA	2 cut(s)	520, 1028
BspFNI	CGCG	2 cut(s)	500, 913
BspLI	GGNNCC	8 cut(s)	204, 216, 228, 271, 421, 487, 765, 909
BspMAI	CTGCAG	1 cut(s)	614
BspMI	ACCTGC	1 cut(s)	1217
BspOI	GCTAGC	1 cut(s)	1109
BspPI	GGATC	3 cut(s)	385, 499, 512
BspT107I	GGYRCC	4 cut(s)	226, 269, 419, 763
BspTNI	GGTCTC	1 cut(s)	680
BsrBI	CCGCTC	1 cut(s)	736
BsrI	ACTGG	2 cut(s)	394, 1068
BssECI	CCNNGG	6 cut(s)	210, 265, 346, 675, 911, 1091
BssMI	GATC	7 cut(s)	45, 330, 390, 491, 517, 804, 828
BssNI	GRCGYC	3 cut(s)	270, 420, 764
Bst2UI	CCWGG	3 cut(s)	347, 677, 1092
Bst4CI	ACNGT	5 cut(s)	222, 302, 862, 1186, 1288
Bst6I	CTCTTC	2 cut(s)	240, 596
BstACI	GRCGYC	3 cut(s)	270, 420, 764
BstAPI	GCANNNNNTGC	2 cut(s)	1134, 1265
BstC8I	GCNNGC	3 cut(s)	312, 824, 1107
BstDEI	CTNAG	6 cut(s)	88, 192, 408, 1359, 1371, 1386
BstDSI	CCRYGG	1 cut(s)	911
BstENI	CCTNNNNNAGG	1 cut(s)	344
BstF5I	GGATG	6 cut(s)	48, 366, 595, 859, 909, 1123
BstFNI	CGCG	2 cut(s)	500, 913
BstH2I	RGCGCY	5 cut(s)	273, 423, 744, 767, 1326
BstHHI	GCGC	5 cut(s)	272, 422, 743, 766, 1325
BstKTI	GATC	7 cut(s)	48, 333, 393, 494, 520, 807, 831
BstMAI	GTCTC	2 cut(s)	680, 1207
BstMBI	GATC	7 cut(s)	45, 330, 390, 491, 517, 804, 828
BstMCI	CGRYCG	1 cut(s)	917
BstMWI	GCNNNNNNNGC	8 cut(s)	371, 1111, 1134, 1232, 1265, 1352, 1361, 1364
BstNI	CCWGG	3 cut(s)	347, 677, 1092
BstNSI	RCATGY	1 cut(s)	1268
BstSCI	CCNGG	8 cut(s)	39, 265, 345, 482, 487, 675, 1090, 1154
BstSFI	CTRYAG	2 cut(s)	298, 610
BstSLI	GKGCMC	1 cut(s)	489
BstUI	CGCG	2 cut(s)	500, 913
BstV1I	GCAGC	8 cut(s)	781, 821, 1007, 1222, 1268, 1342, 1376, 1379
BstV2I	GAAGAC	1 cut(s)	515
BstX2I	RGATCY	1 cut(s)	390
BstXI	CCANNNNNNTGG	1 cut(s)	1214
BstYI	RGATCY	1 cut(s)	390
Bsu36I	CCTNAGG	1 cut(s)	192
BsuI	GTATCC	1 cut(s)	1025
BsuRI	GGCC	4 cut(s)	239, 400, 487, 822
BtgI	CCRYGG	1 cut(s)	911
BtgZI	GCGATG	3 cut(s)	366, 1095, 1152
BtsCI	GGATG	6 cut(s)	48, 366, 595, 859, 909, 1123
BtsIMutI	CAGTG	2 cut(s)	307, 401
BveI	ACCTGC	1 cut(s)	1217
Cac8I	GCNNGC	3 cut(s)	312, 824, 1107
CaiI	CAGNNNCTG	1 cut(s)	1370
CfoI	GCGC	5 cut(s)	272, 422, 743, 766, 1325
Cfr13I	GGNCC	6 cut(s)	250, 485, 486, 753, 820, 907
Cfr42I	CCGCGG	1 cut(s)	914
CseI	GACGC	2 cut(s)	506, 543
CspCI	CAANNNNNGTGG	2 cut(s)	1029, 1064
CviAII	CATG	4 cut(s)	118, 943, 1168, 1265
DdeI	CTNAG	6 cut(s)	88, 192, 408, 1359, 1371, 1386
DinI	GGCGCC	3 cut(s)	271, 421, 765
DpnI	GATC	7 cut(s)	47, 332, 392, 493, 519, 806, 830
DpnII	GATC	7 cut(s)	45, 330, 390, 491, 517, 804, 828
DraI	TTTAAA	1 cut(s)	1294
DrdI	GACNNNNNNGTC	1 cut(s)	553
DriI	GACNNNNNGTC	2 cut(s)	913, 1268
DseDI	GACNNNNNNGTC	1 cut(s)	553
EaeI	YGGCCR	1 cut(s)	237
Eam1104I	CTCTTC	2 cut(s)	240, 596
Eam1105I	GACNNNNNGTC	2 cut(s)	913, 1268
EarI	CTCTTC	2 cut(s)	240, 596
EciI	GGCGGA	1 cut(s)	177
Ecl136II	GAGCTC	2 cut(s)	310, 708
Eco24I	GRGCYC	3 cut(s)	312, 489, 710
Eco31I	GGTCTC	1 cut(s)	680
Eco47I	GGWCC	3 cut(s)	250, 753, 907
Eco47III	AGCGCT	1 cut(s)	1324
Eco53kI	GAGCTC	2 cut(s)	310, 708
Eco81I	CCTNAGG	1 cut(s)	192
Eco88I	CYCGRG	2 cut(s)	209, 375
EcoICRI	GAGCTC	2 cut(s)	310, 708
EcoNI	CCTNNNNNAGG	1 cut(s)	344
EcoO109I	RGGNCCY	1 cut(s)	250
EcoRII	CCWGG	3 cut(s)	345, 675, 1090
EcoT38I	GRGCYC	3 cut(s)	312, 489, 710
EgeI	GGCGCC	3 cut(s)	271, 421, 765
EheI	GGCGCC	3 cut(s)	271, 421, 765
Esp3I	CGTCTC	1 cut(s)	1207
FaeI	CATG	4 cut(s)	121, 946, 1171, 1268
FaiI	YATR	9 cut(s)	119, 335, 748, 839, 893, 944, 1169, 1215, 1266
FalI	AAGNNNNNCTT	2 cut(s)	1061, 1093
FaqI	GGGAC	1 cut(s)	918
FatI	CATG	4 cut(s)	117, 942, 1167, 1264
FauI	CCCGC	3 cut(s)	474, 805, 918
FbaI	TGATCA	1 cut(s)	828
Fnu4HI	GCNGC	9 cut(s)	744, 795, 810, 996, 1236, 1257, 1356, 1365, 1368
FokI	GGATG	6 cut(s)	35, 353, 602, 866, 916, 1130
FriOI	GRGCYC	3 cut(s)	312, 489, 710
Fsp4HI	GCNGC	9 cut(s)	744, 795, 810, 996, 1236, 1257, 1356, 1365, 1368
FspBI	CTAG	2 cut(s)	1106, 1343
GlaI	GCGC	5 cut(s)	271, 421, 742, 765, 1324
GluI	GCNGC	9 cut(s)	744, 795, 810, 996, 1236, 1257, 1356, 1365, 1368
HaeII	RGCGCY	5 cut(s)	273, 423, 744, 767, 1326
HaeIII	GGCC	4 cut(s)	239, 400, 487, 822
HgaI	GACGC	2 cut(s)	506, 543
HhaI	GCGC	5 cut(s)	272, 422, 743, 766, 1325
Hin1I	GRCGYC	3 cut(s)	270, 420, 764
Hin1II	CATG	4 cut(s)	121, 946, 1171, 1268
Hin6I	GCGC	5 cut(s)	270, 420, 741, 764, 1323
HinP1I	GCGC	5 cut(s)	270, 420, 741, 764, 1323
HincII	GTYRAC	1 cut(s)	1173
HindII	GTYRAC	1 cut(s)	1173
HinfI	GANTC	4 cut(s)	378, 437, 473, 479
HphI	GGTGA	2 cut(s)	982, 1229
Hpy166II	GTNNAC	3 cut(s)	1173, 1220, 1284
Hpy188I	TCNGA	6 cut(s)	478, 496, 627, 637, 712, 1274
Hpy188III	TCNNGA	3 cut(s)	328, 521, 1029
Hpy8I	GTNNAC	3 cut(s)	1173, 1220, 1284
Hpy99I	CGWCG	6 cut(s)	226, 365, 389, 437, 559, 1247
HpyAV	CCTTC	7 cut(s)	81, 117, 410, 574, 622, 715, 961
HpyCH4III	ACNGT	5 cut(s)	222, 302, 862, 1186, 1288
HpyCH4IV	ACGT	1 cut(s)	1175
HpyCH4V	TGCA	5 cut(s)	612, 995, 1128, 1238, 1256
HpyF10VI	GCNNNNNNNGC	8 cut(s)	371, 1111, 1134, 1232, 1265, 1352, 1361, 1364
HpyF3I	CTNAG	6 cut(s)	88, 192, 408, 1359, 1371, 1386
HpySE526I	ACGT	1 cut(s)	1175
Hsp92I	GRCGYC	3 cut(s)	270, 420, 764
Hsp92II	CATG	4 cut(s)	121, 946, 1171, 1268
HspAI	GCGC	5 cut(s)	270, 420, 741, 764, 1323
KasI	GGCGCC	3 cut(s)	269, 419, 763
Kpn2I	TCCGGA	2 cut(s)	520, 1028
Ksp22I	TGATCA	1 cut(s)	828
KspI	CCGCGG	1 cut(s)	914
Kzo9I	GATC	7 cut(s)	45, 330, 390, 491, 517, 804, 828
LmnI	GCTCC	5 cut(s)	190, 208, 220, 733, 738
Lsp1109I	GCAGC	8 cut(s)	781, 821, 1007, 1222, 1268, 1342, 1376, 1379
LweI	GCATC	4 cut(s)	206, 1118, 1129, 1243
MaeI	CTAG	2 cut(s)	1106, 1343
MaeII	ACGT	1 cut(s)	1175
MaeIII	GTNAC	3 cut(s)	605, 856, 1186
MalI	GATC	7 cut(s)	47, 332, 392, 493, 519, 806, 830
MbiI	CCGCTC	1 cut(s)	736
MboI	GATC	7 cut(s)	45, 330, 390, 491, 517, 804, 828
MflI	RGATCY	1 cut(s)	390
MhlI	GDGCHC	3 cut(s)	312, 489, 710
MlsI	TGGCCA	1 cut(s)	239
MluCI	AATT	5 cut(s)	280, 526, 584, 1054, 1098
MluNI	TGGCCA	1 cut(s)	239
Mly113I	GGCGCC	3 cut(s)	270, 420, 764
MlyI	GAGTC	3 cut(s)	387, 431, 473
MmeI	TCCRAC	5 cut(s)	501, 645, 663, 708, 1252
Mox20I	TGGCCA	1 cut(s)	239
MroI	TCCGGA	2 cut(s)	520, 1028
MroXI	GAANNNNTTC	1 cut(s)	1076
MscI	TGGCCA	1 cut(s)	239
MseI	TTAA	6 cut(s)	279, 284, 954, 963, 1037, 1293
MslI	CAYNNNNRTG	2 cut(s)	300, 1212
Msp20I	TGGCCA	1 cut(s)	239
MspA1I	CMGCKG	5 cut(s)	812, 826, 913, 998, 1370
MspR9I	CCNGG	8 cut(s)	41, 267, 347, 484, 489, 677, 1092, 1156
MvaI	CCWGG	3 cut(s)	347, 677, 1092
MvnI	CGCG	2 cut(s)	500, 913
MwoI	GCNNNNNNNGC	8 cut(s)	371, 1111, 1134, 1232, 1265, 1352, 1361, 1364
NarI	GGCGCC	3 cut(s)	270, 420, 764
NciI	CCSGG	5 cut(s)	41, 267, 484, 489, 1156
NdeII	GATC	7 cut(s)	45, 330, 390, 491, 517, 804, 828
NheI	GCTAGC	1 cut(s)	1105
NlaIII	CATG	4 cut(s)	121, 946, 1171, 1268
NlaIV	GGNNCC	8 cut(s)	204, 216, 228, 271, 421, 487, 765, 909
NmuCI	GTSAC	1 cut(s)	856
NspI	RCATGY	1 cut(s)	1268
OliI	CACNNNNGTG	1 cut(s)	300
PcsI	WCGNNNNNNNCGW	5 cut(s)	318, 348, 420, 554, 641
PdmI	GAANNNNTTC	1 cut(s)	1076
PfeI	GAWTC	1 cut(s)	473
PflFI	GACNNNGTC	2 cut(s)	359, 1199
PkrI	GCNGC	9 cut(s)	745, 796, 811, 997, 1237, 1258, 1357, 1366, 1369
PleI	GAGTC	3 cut(s)	386, 431, 473
PluTI	GGCGCC	3 cut(s)	273, 423, 767
PpsI	GAGTC	3 cut(s)	386, 431, 473
PpuMI	RGGWCCY	1 cut(s)	250
Psp124BI	GAGCTC	2 cut(s)	312, 710
Psp5II	RGGWCCY	1 cut(s)	250
Psp6I	CCWGG	3 cut(s)	345, 675, 1090
PspGI	CCWGG	3 cut(s)	345, 675, 1090
PspN4I	GGNNCC	8 cut(s)	204, 216, 228, 271, 421, 487, 765, 909
PspOMI	GGGCCC	1 cut(s)	485
PspPI	GGNCC	6 cut(s)	250, 485, 486, 753, 820, 907
PspPPI	RGGWCCY	1 cut(s)	250
PstI	CTGCAG	1 cut(s)	614
PstNI	CAGNNNCTG	1 cut(s)	1370
PsuI	RGATCY	1 cut(s)	390
PsyI	GACNNNGTC	2 cut(s)	359, 1199
PvuII	CAGCTG	3 cut(s)	826, 998, 1370
RseI	CAYNNNNRTG	2 cut(s)	300, 1212
SacI	GAGCTC	2 cut(s)	312, 710
SacII	CCGCGG	1 cut(s)	914
SaqAI	TTAA	6 cut(s)	279, 284, 954, 963, 1037, 1293
SatI	GCNGC	9 cut(s)	744, 795, 810, 996, 1236, 1257, 1356, 1365, 1368
Sau3AI	GATC	7 cut(s)	45, 330, 390, 491, 517, 804, 828
Sau96I	GGNCC	6 cut(s)	250, 485, 486, 753, 820, 907
SchI	GAGTC	3 cut(s)	387, 431, 473
ScrFI	CCNGG	8 cut(s)	41, 267, 347, 484, 489, 677, 1092, 1156
SduI	GDGCHC	3 cut(s)	312, 489, 710
SfaNI	GCATC	4 cut(s)	206, 1118, 1129, 1243
SfcI	CTRYAG	2 cut(s)	298, 610
SfoI	GGCGCC	3 cut(s)	271, 421, 765
Sfr303I	CCGCGG	1 cut(s)	914
SgrBI	CCGCGG	1 cut(s)	914
SinI	GGWCC	3 cut(s)	250, 753, 907
SmiMI	CAYNNNNRTG	2 cut(s)	300, 1212
Sse9I	AATT	5 cut(s)	280, 526, 584, 1054, 1098
SsiI	CCGC	8 cut(s)	188, 467, 736, 744, 812, 901, 911, 913
SspDI	GGCGCC	3 cut(s)	269, 419, 763
SspMI	CTAG	2 cut(s)	1106, 1343
SstI	GAGCTC	2 cut(s)	312, 710
StyD4I	CCNGG	8 cut(s)	39, 265, 345, 482, 487, 675, 1090, 1154
TaaI	ACNGT	5 cut(s)	222, 302, 862, 1186, 1288
TaiI	ACGT	1 cut(s)	1178
TaqI	TCGA	6 cut(s)	56, 114, 288, 432, 557, 917
TasI	AATT	5 cut(s)	280, 526, 584, 1054, 1098
TauI	GCSGC	1 cut(s)	746
TfiI	GAWTC	1 cut(s)	473
Tru1I	TTAA	6 cut(s)	279, 284, 954, 963, 1037, 1293
Tru9I	TTAA	6 cut(s)	279, 284, 954, 963, 1037, 1293
TscAI	CASTG	2 cut(s)	307, 401
TseFI	GTSAC	1 cut(s)	856
TseI	GCWGC	8 cut(s)	794, 809, 995, 1235, 1256, 1355, 1364, 1367
Tsp45I	GTSAC	1 cut(s)	856
TspDTI	ATGAA	2 cut(s)	134, 908
TspGWI	ACGGA	2 cut(s)	555, 1070
TspRI	CASTG	2 cut(s)	307, 401
Tth111I	GACNNNGTC	2 cut(s)	359, 1199
VpaK11BI	GGWCC	3 cut(s)	250, 753, 907
XagI	CCTNNNNNAGG	1 cut(s)	344
XapI	RAATTY	2 cut(s)	1054, 1098
XceI	RCATGY	1 cut(s)	1268
XmnI	GAANNNNTTC	1 cut(s)	1076
XspI	CTAG	2 cut(s)	1106, 1343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.