Prupe.8G164100_v2.0.a1

Senescence-associated protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
17113291 .. 17117682
4392 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G164100.1

Sequence Viewer

Length: 1260 bp
ATGTCTGCTTCAAAACCCATTTCTCCTTCTTCTTCTTCGTCACCTTCGTCTCTGTACCCTTCAGCCGACATGAAAGACCTCGCTGAGAACCTCTTCCCGGAAGACGACTCCGTTTCTAACCGAAATACCCAATCATCCGAGGAACTCATGGTCAAAATTCCAGGGGCCATCGTCCACCTCATAGAGAAAGACTCAAGCATCGAACTTGCCACTGGAGAACTCACCATAGTTAGTCTCCGCCAAAATGGGAACATAGTCGCTGTACTTGCCCGCGTAGGCGACCAGATTCAATGGCCTCTGGCCAGAGACGAAGCCGCCGTGAAGCTGGACCAGGCCCACTACTTCTTCACTCTTCGGGTCCCTGCAAATGGGTCGCCGAAAAGAGACGAAATTGATGACCCGACCCATGAGAAAGGTCAGTTTGTTCTGCTGAATTATGGGTTAACTTTTGCTTCTTCGAAGGGGCAAGAGGGTTTGCTGAATGAGCTCGATCAGATTTTGGGGATTTACAGTTGTTTTTCGGAGGAGAGGGTGGAGGGGTTGGGGAATTGGGAGGTTCTGGATGGGTCAGTGGGGAGGGACACATCTCAGGAGGAGAGGGCCGCGGCCTACTGGACTACGCTGGCTCCGAATGTAGAGGATTACAGCGGGAAATGCGCGAGGTTGATTGCGGCGGGTTCGGGTCAGGTGATTAGGGGGATTTTGTGGTGTGGGGATGTGACTGTGGATAGGTTGAAGTGGGGGAATGAGTTTTTGAAGATGAGAATGGGGCCCACTTCAGAATCAGAGATTAGTCCAGAGACTTTGAAGAGGATACAAAGGGTTAAGAAGTTGACAAAGATGTCAGAGGACGTGGCCACTGGAATCCTTTCTGGGGTTGTTAAAGTATCTGGATTCTTCACAAGTTCTATAGTTAACTCTAAAGTTGGCCAGAAATTTTTTAGCCTTCTGCCCGGAGAAATCGTCCTTGCTTCCTTGGATGGATTCAACAAGGTCTGTGATGCTGTTGAAGTGGCGGGAAGGAATGTTATGTCAACCACATCAGTTGTCACCACTGGACTTGTTTCACAGAGGTATGGAGAACCAGCGGCAAAGGTAACGAATGAAGGGCTTGATGCTGCCGGGCATGCTATAGGGACGGCTTGGGCTGTGTTCAAGGTGAGAAAGGCTATAAACCCGAAGAGCGTGCTCAAGCCTACAACCCTTGTTAAAGCTGCTGCTGAATCAAAGTCCTCCAAGCTGAAGTCTCAAACTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

420

Amino Acids

45.18

Weight (kDa)

5.98

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 841
AccII CGCG 3 cut(s) 273, 605, 659
AcoI YGGCCR 3 cut(s) 300, 855, 928
AcsI RAATTY 2 cut(s) 156, 935
AcuI CTGAAG 2 cut(s) 45, 762
AfaI GTAC 2 cut(s) 56, 264
AfiI CCNNNNNNNGG 3 cut(s) 97, 368, 874
AgsI TTSAA 8 cut(s) 12, 290, 736, 757, 808, 988, 1010, 1156
AjiI CACGTC 1 cut(s) 853
AjnI CCWGG 2 cut(s) 160, 330
AluBI AGCT 4 cut(s) 325, 487, 1214, 1240
AluI AGCT 4 cut(s) 325, 487, 1214, 1240
Alw21I GWGCWC 2 cut(s) 489, 1191
Alw26I GTCTC 6 cut(s) 54, 239, 300, 378, 794, 1251
AoxI GGCC 9 cut(s) 165, 293, 300, 333, 600, 606, 770, 855, 928
ApaI GGGCCC 1 cut(s) 774
ApeKI GCWGC 3 cut(s) 1118, 1214, 1217
ApoI RAATTY 2 cut(s) 156, 935
Asp700I GAANNNNTTC 2 cut(s) 92, 868
AspLEI GCGC 1 cut(s) 659
AspS9I GGNCC 7 cut(s) 165, 328, 334, 358, 600, 770, 771
AsuC2I CCSGG 3 cut(s) 98, 954, 1123
AsuHPI GGTGA 5 cut(s) 33, 214, 700, 1042, 1171
AsuII TTCGAA 1 cut(s) 458
AvaII GGWCC 2 cut(s) 328, 358
BaeGI GKGCMC 1 cut(s) 774
BalI TGGCCA 3 cut(s) 302, 857, 930
BanII GRGCYC 2 cut(s) 489, 774
BbsI GAAGAC 1 cut(s) 108
Bbv12I GWGCWC 2 cut(s) 489, 1191
BbvI GCAGC 3 cut(s) 1105, 1201, 1204
BccI CCATC 3 cut(s) 176, 557, 974
BceAI ACGGC 2 cut(s) 302, 1155
BcgI CGANNNNNNTGC 4 cut(s) 354, 388, 1168, 1202
BciT130I CCWGG 2 cut(s) 162, 332
BciVI GTATCC 1 cut(s) 807
BcnI CCSGG 3 cut(s) 98, 954, 1123
BcoDI GTCTC 6 cut(s) 54, 239, 300, 378, 794, 1251
BfmI CTRYAG 2 cut(s) 909, 1131
BfuI GTATCC 1 cut(s) 807
BisI GCNGC 8 cut(s) 315, 603, 606, 672, 1089, 1119, 1215, 1218
BlsI GCNGC 8 cut(s) 316, 604, 607, 673, 1090, 1120, 1216, 1219
Bme1390I CCNGG 5 cut(s) 98, 162, 332, 954, 1123
Bme18I GGWCC 2 cut(s) 328, 358
BmgBI CACGTC 1 cut(s) 853
BmgT120I GGNCC 7 cut(s) 165, 328, 334, 358, 600, 770, 771
BmiI GGNNCC 6 cut(s) 166, 359, 360, 627, 771, 772
BmrFI CCNGG 5 cut(s) 98, 162, 332, 954, 1123
BmsI GCATC 3 cut(s) 207, 991, 1105
BpiI GAAGAC 1 cut(s) 108
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 1 cut(s) 234
Bpu14I TTCGAA 1 cut(s) 458
BpuEI CTTGAG 2 cut(s) 178, 1175
BpuMI CCSGG 3 cut(s) 98, 954, 1123
BsaJI CCNNGG 4 cut(s) 138, 161, 603, 975
BsaXI ACNNNNNCTCC 4 cut(s) 610, 640, 948, 978
Bsc4I CCNNNNNNNGG 3 cut(s) 97, 368, 874
Bse1I ACTGG 4 cut(s) 217, 617, 865, 1060
BseBI CCWGG 2 cut(s) 162, 332
BseDI CCNNGG 4 cut(s) 138, 161, 603, 975
BseGI GGATG 4 cut(s) 134, 568, 721, 985
BseLI CCNNNNNNNGG 3 cut(s) 97, 368, 874
BseMII CTCAG 2 cut(s) 75, 602
BseNI ACTGG 4 cut(s) 217, 617, 865, 1060
BseRI GAGGAG 2 cut(s) 539, 608
BseSI GKGCMC 1 cut(s) 774
BseXI GCAGC 3 cut(s) 1105, 1201, 1204
Bsh1236I CGCG 3 cut(s) 273, 605, 659
BshFI GGCC 9 cut(s) 167, 295, 302, 335, 602, 608, 772, 857, 930
BsiHKAI GWGCWC 2 cut(s) 489, 1191
BsiSI CCGG 3 cut(s) 98, 954, 1122
BslFI GGGAC 3 cut(s) 344, 593, 1150
BslI CCNNNNNNNGG 3 cut(s) 97, 368, 874
BsmAI GTCTC 6 cut(s) 54, 239, 300, 378, 794, 1251
BsmBI CGTCTC 3 cut(s) 54, 300, 378
BsmFI GGGAC 3 cut(s) 344, 593, 1150
BsnI GGCC 9 cut(s) 167, 295, 302, 335, 602, 608, 772, 857, 930
Bsp119I TTCGAA 1 cut(s) 458
Bsp120I GGGCCC 1 cut(s) 770
Bsp1286I GDGCHC 3 cut(s) 489, 774, 1191
Bsp143I GATC 1 cut(s) 490
BspANI GGCC 9 cut(s) 167, 295, 302, 335, 602, 608, 772, 857, 930
BspCNI CTCAG 2 cut(s) 76, 601
BspFNI CGCG 3 cut(s) 273, 605, 659
BspLI GGNNCC 6 cut(s) 166, 359, 360, 627, 771, 772
BspQI GCTCTTC 1 cut(s) 1175
BspT104I TTCGAA 1 cut(s) 458
BsrI ACTGG 4 cut(s) 217, 617, 865, 1060
BssECI CCNNGG 4 cut(s) 138, 161, 603, 975
BssMI GATC 1 cut(s) 490
BssT1I CCWWGG 1 cut(s) 975
Bst2UI CCWGG 2 cut(s) 162, 332
Bst4CI ACNGT 2 cut(s) 512, 724
Bst6I CTCTTC 4 cut(s) 98, 357, 803, 1175
BstBI TTCGAA 1 cut(s) 458
BstC8I GCNNGC 4 cut(s) 271, 624, 1128, 1187
BstDEI CTNAG 3 cut(s) 84, 588, 1254
BstDSI CCRYGG 1 cut(s) 603
BstF5I GGATG 4 cut(s) 134, 568, 721, 985
BstFNI CGCG 3 cut(s) 273, 605, 659
BstHHI GCGC 1 cut(s) 659
BstKTI GATC 1 cut(s) 493
BstMAI GTCTC 6 cut(s) 54, 239, 300, 378, 794, 1251
BstMBI GATC 1 cut(s) 490
BstMWI GCNNNNNNNGC 4 cut(s) 266, 484, 654, 1127
BstNI CCWGG 2 cut(s) 162, 332
BstNSI RCATGY 1 cut(s) 1130
BstSCI CCNGG 5 cut(s) 96, 160, 330, 952, 1121
BstSFI CTRYAG 2 cut(s) 909, 1131
BstSLI GKGCMC 1 cut(s) 774
BstUI CGCG 3 cut(s) 273, 605, 659
BstV1I GCAGC 3 cut(s) 1105, 1201, 1204
BstV2I GAAGAC 1 cut(s) 108
BsuI GTATCC 1 cut(s) 807
BsuRI GGCC 9 cut(s) 167, 295, 302, 335, 602, 608, 772, 857, 930
BtgI CCRYGG 1 cut(s) 603
BtrI CACGTC 1 cut(s) 853
BtsCI GGATG 4 cut(s) 134, 568, 721, 985
BtsIMutI CAGTG 4 cut(s) 210, 576, 858, 1053
Cac8I GCNNGC 4 cut(s) 271, 624, 1128, 1187
CfoI GCGC 1 cut(s) 659
Cfr13I GGNCC 7 cut(s) 165, 328, 334, 358, 600, 770, 771
Cfr42I CCGCGG 1 cut(s) 606
Csp6I GTAC 2 cut(s) 55, 263
CspCI CAANNNNNGTGG 4 cut(s) 1027, 1042, 1062, 1077
CviAII CATG 4 cut(s) 70, 148, 407, 1127
CviQI GTAC 2 cut(s) 55, 263
DdeI CTNAG 3 cut(s) 84, 588, 1254
DpnI GATC 1 cut(s) 492
DpnII GATC 1 cut(s) 490
DrdI GACNNNNNNGTC 1 cut(s) 841
DseDI GACNNNNNNGTC 1 cut(s) 841
EaeI YGGCCR 3 cut(s) 300, 855, 928
Eam1104I CTCTTC 4 cut(s) 98, 357, 803, 1175
EarI CTCTTC 4 cut(s) 98, 357, 803, 1175
EciI GGCGGA 1 cut(s) 227
Ecl136II GAGCTC 1 cut(s) 487
Eco130I CCWWGG 1 cut(s) 975
Eco24I GRGCYC 2 cut(s) 489, 774
Eco47I GGWCC 2 cut(s) 328, 358
Eco53kI GAGCTC 1 cut(s) 487
Eco57I CTGAAG 2 cut(s) 45, 762
EcoICRI GAGCTC 1 cut(s) 487
EcoO109I RGGNCCY 2 cut(s) 358, 770
EcoRII CCWGG 2 cut(s) 160, 330
EcoT14I CCWWGG 1 cut(s) 975
EcoT38I GRGCYC 2 cut(s) 489, 774
ErhI CCWWGG 1 cut(s) 975
Esp3I CGTCTC 3 cut(s) 54, 300, 378
FaeI CATG 4 cut(s) 73, 151, 410, 1130
FaqI GGGAC 3 cut(s) 344, 593, 1150
FatI CATG 4 cut(s) 69, 147, 406, 1126
FauI CCCGC 4 cut(s) 278, 641, 667, 1009
Fnu4HI GCNGC 8 cut(s) 315, 603, 606, 672, 1089, 1119, 1215, 1218
FokI GGATG 4 cut(s) 121, 575, 728, 992
FriOI GRGCYC 2 cut(s) 489, 774
Fsp4HI GCNGC 8 cut(s) 315, 603, 606, 672, 1089, 1119, 1215, 1218
GlaI GCGC 1 cut(s) 658
GluI GCNGC 8 cut(s) 315, 603, 606, 672, 1089, 1119, 1215, 1218
GsuI CTGGAG 1 cut(s) 234
HaeIII GGCC 9 cut(s) 167, 295, 302, 335, 602, 608, 772, 857, 930
HapII CCGG 3 cut(s) 98, 954, 1122
HhaI GCGC 1 cut(s) 659
Hin1II CATG 4 cut(s) 73, 151, 410, 1130
Hin6I GCGC 1 cut(s) 657
HinP1I GCGC 1 cut(s) 657
HincII GTYRAC 4 cut(s) 444, 834, 916, 1035
HindII GTYRAC 4 cut(s) 444, 834, 916, 1035
HinfI GANTC 8 cut(s) 107, 191, 286, 782, 864, 894, 984, 1223
HpaI GTTAAC 2 cut(s) 444, 916
HpaII CCGG 3 cut(s) 98, 954, 1122
HphI GGTGA 5 cut(s) 33, 214, 700, 1042, 1171
Hpy166II GTNNAC 5 cut(s) 175, 444, 834, 916, 1035
Hpy188I TCNGA 7 cut(s) 139, 495, 523, 630, 781, 787, 847
Hpy188III TCNNGA 4 cut(s) 560, 590, 797, 891
Hpy8I GTNNAC 5 cut(s) 175, 444, 834, 916, 1035
HpyAV CCTTC 7 cut(s) 36, 54, 69, 454, 956, 1014, 1100
HpyCH4III ACNGT 2 cut(s) 512, 724
HpyCH4IV ACGT 1 cut(s) 852
HpyCH4V TGCA 1 cut(s) 365
HpyF10VI GCNNNNNNNGC 4 cut(s) 266, 484, 654, 1127
HpyF3I CTNAG 3 cut(s) 84, 588, 1254
HpySE526I ACGT 1 cut(s) 852
Hsp92II CATG 4 cut(s) 73, 151, 410, 1130
HspAI GCGC 1 cut(s) 657
KflI GGGWCCC 1 cut(s) 358
KspAI GTTAAC 2 cut(s) 444, 916
KspI CCGCGG 1 cut(s) 606
Kzo9I GATC 1 cut(s) 490
LguI GCTCTTC 1 cut(s) 1175
LmnI GCTCC 1 cut(s) 631
Lsp1109I GCAGC 3 cut(s) 1105, 1201, 1204
LweI GCATC 3 cut(s) 207, 991, 1105
MaeII ACGT 1 cut(s) 852
MaeIII GTNAC 4 cut(s) 39, 718, 1048, 1096
MalI GATC 1 cut(s) 492
MboI GATC 1 cut(s) 490
MhlI GDGCHC 3 cut(s) 489, 774, 1191
MlsI TGGCCA 3 cut(s) 302, 857, 930
MluCI AATT 5 cut(s) 156, 390, 433, 547, 935
MluNI TGGCCA 3 cut(s) 302, 857, 930
MlyI GAGTC 2 cut(s) 101, 185
Mox20I TGGCCA 3 cut(s) 302, 857, 930
MroXI GAANNNNTTC 2 cut(s) 92, 868
MscI TGGCCA 3 cut(s) 302, 857, 930
MseI TTAA 5 cut(s) 443, 825, 882, 915, 1209
Msp20I TGGCCA 3 cut(s) 302, 857, 930
MspA1I CMGCKG 3 cut(s) 605, 648, 1088
MspI CCGG 3 cut(s) 98, 954, 1122
MspR9I CCNGG 5 cut(s) 98, 162, 332, 954, 1123
MvaI CCWGG 2 cut(s) 162, 332
MvnI CGCG 3 cut(s) 273, 605, 659
MwoI GCNNNNNNNGC 4 cut(s) 266, 484, 654, 1127
NciI CCSGG 3 cut(s) 98, 954, 1123
NdeII GATC 1 cut(s) 490
NlaIII CATG 4 cut(s) 73, 151, 410, 1130
NlaIV GGNNCC 6 cut(s) 166, 359, 360, 627, 771, 772
NmuCI GTSAC 3 cut(s) 39, 718, 1048
NspI RCATGY 1 cut(s) 1130
NspV TTCGAA 1 cut(s) 458
PaeI GCATGC 1 cut(s) 1130
PciSI GCTCTTC 1 cut(s) 1175
PcsI WCGNNNNNNNCGW 3 cut(s) 44, 315, 626
PdmI GAANNNNTTC 2 cut(s) 92, 868
PfeI GAWTC 6 cut(s) 286, 782, 864, 894, 984, 1223
PfoI TCCNGGA 1 cut(s) 96
PkrI GCNGC 8 cut(s) 316, 604, 607, 673, 1090, 1120, 1216, 1219
PleI GAGTC 2 cut(s) 101, 185
PpsI GAGTC 2 cut(s) 101, 185
PpuMI RGGWCCY 1 cut(s) 358
Psp124BI GAGCTC 1 cut(s) 489
Psp5II RGGWCCY 1 cut(s) 358
Psp6I CCWGG 2 cut(s) 160, 330
PspGI CCWGG 2 cut(s) 160, 330
PspN4I GGNNCC 6 cut(s) 166, 359, 360, 627, 771, 772
PspOMI GGGCCC 1 cut(s) 770
PspPI GGNCC 7 cut(s) 165, 328, 334, 358, 600, 770, 771
PspPPI RGGWCCY 1 cut(s) 358
RsaI GTAC 2 cut(s) 56, 264
RsaNI GTAC 2 cut(s) 55, 263
SacI GAGCTC 1 cut(s) 489
SacII CCGCGG 1 cut(s) 606
SapI GCTCTTC 1 cut(s) 1175
SaqAI TTAA 5 cut(s) 443, 825, 882, 915, 1209
SatI GCNGC 8 cut(s) 315, 603, 606, 672, 1089, 1119, 1215, 1218
Sau3AI GATC 1 cut(s) 490
Sau96I GGNCC 7 cut(s) 165, 328, 334, 358, 600, 770, 771
SchI GAGTC 2 cut(s) 101, 185
ScrFI CCNGG 5 cut(s) 98, 162, 332, 954, 1123
SduI GDGCHC 3 cut(s) 489, 774, 1191
SfaNI GCATC 3 cut(s) 207, 991, 1105
SfcI CTRYAG 2 cut(s) 909, 1131
Sfr303I CCGCGG 1 cut(s) 606
SfuI TTCGAA 1 cut(s) 458
SgrBI CCGCGG 1 cut(s) 606
SinI GGWCC 2 cut(s) 328, 358
SmlI CTYRAG 2 cut(s) 193, 1190
SmoI CTYRAG 2 cut(s) 193, 1190
SphI GCATGC 1 cut(s) 1130
Sse9I AATT 5 cut(s) 156, 390, 433, 547, 935
SstI GAGCTC 1 cut(s) 489
StyD4I CCNGG 5 cut(s) 96, 160, 330, 952, 1121
StyI CCWWGG 1 cut(s) 975
TaaI ACNGT 2 cut(s) 512, 724
TaiI ACGT 1 cut(s) 855
TaqI TCGA 3 cut(s) 201, 458, 489
TasI AATT 5 cut(s) 156, 390, 433, 547, 935
TatI WGTACW 1 cut(s) 262
TauI GCSGC 5 cut(s) 317, 605, 608, 674, 1091
TfiI GAWTC 6 cut(s) 286, 782, 864, 894, 984, 1223
Tru1I TTAA 5 cut(s) 443, 825, 882, 915, 1209
Tru9I TTAA 5 cut(s) 443, 825, 882, 915, 1209
TscAI CASTG 4 cut(s) 217, 576, 865, 1060
TseFI GTSAC 3 cut(s) 39, 718, 1048
TseI GCWGC 3 cut(s) 1118, 1214, 1217
Tsp45I GTSAC 3 cut(s) 39, 718, 1048
TspDTI ATGAA 2 cut(s) 86, 1119
TspGWI ACGGA 1 cut(s) 100
TspRI CASTG 4 cut(s) 217, 576, 865, 1060
VpaK11BI GGWCC 2 cut(s) 328, 358
XapI RAATTY 2 cut(s) 156, 935
XceI RCATGY 1 cut(s) 1130
XmnI GAANNNNTTC 2 cut(s) 92, 868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.