Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002216

Physical Location & Seq

Genomic Coordinates Reverse (-)

9887316 .. 9890777

Gene Structure 3462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G009750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGAGTGCCCAAAACCTAAACCTAATCGGGTACGCTTTCAAGAACCAATGGAGTCCCCGGACCCTAATCGGAAGCCCAAACTGTACCCGGAGGTGGTCCAATCCAACCCGGAAGCCCCCTCAATGTCGAACCCGAACCCGAAACCCGAACCGTCGGCCCCAAGTCTCTACCCCTCCCTCGACATGAAGGACCTCGTCGAGGATCTATTCCCGGAGAATCTATCATATTACGAAATCCCGCCGGAAAGTCAATTCCCCGATAGCCCGACCTGCCACGAACCTCCGTCGGCGCCGCCCGTCGCCGCCGAGGAGGTTCTTATTAAGATACCCGGCGCGATCGTTAACCTAATTGATAAGAACTACAGCGTCGAGCTCGCCAGCGGCGACTTCTCGATCGTGCGGCTCGTCCAGGGCGACGACGTCGTTGCGATCCTCGCCCGTGTTGACGATGAGATCCAGTGGCCGCTGTTGAAGGACGAAGGCGTGGTCAAGCTCGACGATTCGCATTACTTTTTCTCGCTGTACGCGCCGGAGGATCATGAGTCGTCGCCGGCGCCGGAGTCCGGCGAGGATGGGAAGACGATGGAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGGATGAGAAGAAAACTAAGGAGGCTGATAATTTCTTGAACTACGGATTGACGATTGCGTCGAAAGGGCAGGAGAAATTGGTGAAGGAATTGGATGAGGTTCTGAAGAGTTACAGCAGTTTTTCGGTGCAGAAGGTTTCGGAGAAGGCGAAGAAGAAGGGGGAGGCGTTGGACAGTTCCCTGGCATTGGAGACGGCGCCGGCTGAGTTGAGTTCGGAGAAGAAGAAGGAGATGAAGGAACAGAGCGCTGCGTATTGGACCACATTGGCTCCCAATGTGGAGGACTATAATGGGAGTGCTGCTAAGTTGATTGCGGCCGGGACGGGGCAGCTGATCAGGGGGATTTTGTGGTGTGGAGATGTCACGGTGGAGAGGTTGAAATGGGGAAATGAGGTTATGAAGAAGAGGATGGAGCCGGGTTCGAATAAGGAAATCAGTCCCCAAACCATGAGGAGGATCAAAAGGGCCAAGAAAGTGAGCAAAACAACACAAAAAGTAGCAGCCGGTGTCCTCTCTGGGGTTTTGAAAGTTTCTGGATACTTCACAGGTGCGGTGGTGAATTCCAAAGTGGGAAAGAGATTCTTTCGTCTTCTGCCTGGGGAAATTTTGCTTGCTGGGCTGGATGGATTTTGTAAGGTCTGTGATGCTGTTGAACTAGCCGGAAAAAATGTCATGTCAGCATCATCTACTGTTACCACTGAGCTTGTCTCTCACAAATATGGTGAAGAAGCAGGTAAGGCGGCAGGCGAAGGGCTTGATGCAGCAGGACATGCCATAGGAACTGCATGGACTGTTTTCAAGATCCGAAAGGCAATGAACCCTAAAAGTGCTTTCAAATCCACCACCCTAGTCAAATCTGCTGCCAAGGCAAAAGCTGATGAGGTAAGGGCAAAGAAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006970 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009642 GO:0009644 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0016020 GO:0030054 GO:0033993 GO:0042221 GO:0043207 GO:0044464 GO:0048511 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Senescence

Protein Analysis

506

Amino Acids

55.38

Weight (kDa)

8.76

Isoelectric Point (pI)

37.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Senescence	PF06911	309 - 495	2.9e-49	Senescence domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002216)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17840 AT2G17840 AT3G51250 AT3G51250 AT4G35985 AT4G35985 AT4G35985
fragaria_vesca	FvH4_1g11540 FvH4_1g11540 FvH4_1g11540 FvH4_1g11540 FvH4_2g01340 FvH4_2g01340 FvH4_2g01340
malus_domestica	MD02G1128400.v1.1 MD10G1123700.v1.1 MD15G1243600.v1.1
prunus_persica	Prupe.7G170600_v2.0.a1 Prupe.8G164100_v2.0.a1
pyrus_communis	pycom10g10590 pycom15g21450
rosa_chinensis	RchiOBHm_Chr2g0099181 RchiOBHm_Chr6g0252261
rosa_laevigata	RLG00000015400 RLG00000016853
rosa_multiflora	Rmu_co7982236.1_g000001 Rmu_sc0006252.1_g000017 Rmu_sc0006878.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143380 Rroxscaffold_7G00216200
rosa_rugosa	Rorug02G0077500 Rorug05G0506500 Rorug05G0506600
rosa_samantha	Rh2AG126400 Rh2BG129600 Rh2CG130600 Rh2DG131000 Rh6AG020300 Rh6BG015900 Rh6CG013100 Rh6DG014400
rosa_wichuraiana	Rw2G009750 Rw6G001670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	676
AatII	GACGTC	1 cut(s)	423
Acc36I	ACCTGC	2 cut(s)	278, 1340
AccB1I	GGYRCC	3 cut(s)	289, 553, 814
AccII	CGCG	2 cut(s)	335, 527
AciI	CCGC	9 cut(s)	239, 293, 303, 381, 400, 464, 932, 1169, 1358
AclWI	GGATC	6 cut(s)	210, 424, 448, 543, 1082, 1414
AcoI	YGGCCR	2 cut(s)	461, 933
AcsI	RAATTY	2 cut(s)	1177, 1221
AcuI	CTGAAG	1 cut(s)	743
AcyI	GRCGYC	4 cut(s)	290, 420, 554, 815
AfaI	GTAC	3 cut(s)	33, 86, 524
AfeI	AGCGCT	1 cut(s)	865
AfiI	CCNNNNNNNGG	7 cut(s)	94, 199, 563, 805, 942, 1071, 1135
AgsI	TTSAA	8 cut(s)	41, 472, 658, 997, 1144, 1271, 1417, 1453
AjnI	CCWGG	3 cut(s)	408, 798, 1213
AluBI	AGCT	5 cut(s)	373, 493, 949, 1321, 1493
AluI	AGCT	5 cut(s)	373, 493, 949, 1321, 1493
Alw21I	GWGCWC	1 cut(s)	375
Alw26I	GTCTC	3 cut(s)	170, 803, 1330
AlwI	GGATC	6 cut(s)	210, 424, 448, 543, 1082, 1414
Aor51HI	AGCGCT	1 cut(s)	865
AoxI	GGCC	4 cut(s)	156, 461, 933, 1083
ApeKI	GCWGC	6 cut(s)	866, 917, 946, 1118, 1379, 1478
ApoI	RAATTY	2 cut(s)	1177, 1221
ArsI	GACNNNNNNTTYG	2 cut(s)	471, 503
AspLEI	GCGC	6 cut(s)	292, 335, 529, 556, 817, 866
AspS9I	GGNCC	6 cut(s)	61, 97, 157, 190, 876, 1083
AsuC2I	CCSGG	7 cut(s)	59, 89, 110, 212, 330, 937, 1035
AsuHPI	GGTGA	3 cut(s)	712, 1186, 1352
AsuII	TTCGAA	1 cut(s)	1040
AvaII	GGWCC	4 cut(s)	61, 97, 190, 876
BaeGI	GKGCMC	1 cut(s)	11
BanI	GGYRCC	3 cut(s)	289, 553, 814
BanII	GRGCYC	1 cut(s)	375
BbsI	GAAGAC	2 cut(s)	584, 1199
Bbv12I	GWGCWC	1 cut(s)	375
BbvI	GCAGC	6 cut(s)	853, 904, 958, 1130, 1391, 1465
BccI	CCATC	4 cut(s)	566, 577, 1021, 1235
BceAI	ACGGC	1 cut(s)	828
BcgI	CGANNNNNNTGC	2 cut(s)	407, 441
BciT130I	CCWGG	3 cut(s)	410, 800, 1215
BciVI	GTATCC	1 cut(s)	1148
BclI	TGATCA	1 cut(s)	951
BcnI	CCSGG	7 cut(s)	59, 89, 110, 212, 330, 937, 1035
BcoDI	GTCTC	3 cut(s)	170, 803, 1330
BfaI	CTAG	2 cut(s)	1274, 1466
BfmI	CTRYAG	1 cut(s)	361
BfoI	RGCGCY	4 cut(s)	293, 557, 818, 867
BfuAI	ACCTGC	2 cut(s)	278, 1340
BfuI	GTATCC	1 cut(s)	1148
Bme18I	GGWCC	4 cut(s)	61, 97, 190, 876
BmgT120I	GGNCC	6 cut(s)	61, 97, 157, 190, 876, 1083
BmiI	GGNNCC	7 cut(s)	63, 159, 291, 555, 816, 888, 1032
BmsI	GCATC	3 cut(s)	1252, 1307, 1366
BpiI	GAAGAC	2 cut(s)	584, 1199
BplI	GAGNNNNNCTC	2 cut(s)	1310, 1342
Bpu14I	TTCGAA	1 cut(s)	1040
BpuMI	CCSGG	7 cut(s)	59, 89, 110, 212, 330, 937, 1035
BsaHI	GRCGYC	4 cut(s)	290, 420, 554, 815
BsaJI	CCNNGG	6 cut(s)	57, 306, 409, 798, 1214, 1482
BsaXI	ACNNNNNCTCC	2 cut(s)	871, 901
Bsc4I	CCNNNNNNNGG	7 cut(s)	94, 199, 563, 805, 942, 1071, 1135
Bse118I	RCCGGY	3 cut(s)	550, 817, 1121
Bse1I	ACTGG	1 cut(s)	457
Bse3DI	GCAATG	1 cut(s)	1437
BseBI	CCWGG	3 cut(s)	410, 800, 1215
BseDI	CCNNGG	6 cut(s)	57, 306, 409, 798, 1214, 1482
BseGI	GGATG	5 cut(s)	577, 628, 718, 1032, 1246
BseLI	CCNNNNNNNGG	7 cut(s)	94, 199, 563, 805, 942, 1071, 1135
BseMI	GCAATG	1 cut(s)	1437
BseMII	CTCAG	2 cut(s)	813, 1308
BseNI	ACTGG	1 cut(s)	457
BseRI	GAGGAG	2 cut(s)	323, 1084
BseSI	GKGCMC	1 cut(s)	11
BseX3I	CGGCCG	1 cut(s)	933
BseXI	GCAGC	6 cut(s)	853, 904, 958, 1130, 1391, 1465
BseYI	CCCAGC	1 cut(s)	1232
BsgI	GTGCAG	1 cut(s)	767
Bsh1236I	CGCG	2 cut(s)	335, 527
Bsh1285I	CGRYCG	3 cut(s)	339, 396, 936
BshFI	GGCC	4 cut(s)	158, 463, 935, 1085
BshNI	GGYRCC	3 cut(s)	289, 553, 814
BsiEI	CGRYCG	3 cut(s)	339, 396, 936
BsiHKAI	GWGCWC	1 cut(s)	375
BslFI	GGGAC	3 cut(s)	40, 952, 1041
BslI	CCNNNNNNNGG	7 cut(s)	94, 199, 563, 805, 942, 1071, 1135
BsmAI	GTCTC	3 cut(s)	170, 803, 1330
BsmBI	CGTCTC	1 cut(s)	803
BsmFI	GGGAC	3 cut(s)	40, 952, 1041
BsnI	GGCC	4 cut(s)	158, 463, 935, 1085
Bsp119I	TTCGAA	1 cut(s)	1040
Bsp1286I	GDGCHC	2 cut(s)	11, 375
Bsp143I	GATC	9 cut(s)	202, 336, 393, 429, 453, 535, 951, 1074, 1419
BspACI	CCGC	9 cut(s)	239, 293, 303, 381, 400, 464, 932, 1169, 1358
BspANI	GGCC	4 cut(s)	158, 463, 935, 1085
BspCNI	CTCAG	2 cut(s)	814, 1309
BspFNI	CGCG	2 cut(s)	335, 527
BspHI	TCATGA	1 cut(s)	538
BspLI	GGNNCC	7 cut(s)	63, 159, 291, 555, 816, 888, 1032
BspMI	ACCTGC	2 cut(s)	278, 1340
BspPI	GGATC	6 cut(s)	210, 424, 448, 543, 1082, 1414
BspT104I	TTCGAA	1 cut(s)	1040
BspT107I	GGYRCC	3 cut(s)	289, 553, 814
BsrDI	GCAATG	1 cut(s)	1437
BsrFI	RCCGGY	3 cut(s)	550, 817, 1121
BsrI	ACTGG	1 cut(s)	457
BssAI	RCCGGY	3 cut(s)	550, 817, 1121
BssECI	CCNNGG	6 cut(s)	57, 306, 409, 798, 1214, 1482
BssMI	GATC	9 cut(s)	202, 336, 393, 429, 453, 535, 951, 1074, 1419
BssNI	GRCGYC	4 cut(s)	290, 420, 554, 815
BssT1I	CCWWGG	1 cut(s)	1482
Bst2UI	CCWGG	3 cut(s)	410, 800, 1215
Bst4CI	ACNGT	6 cut(s)	84, 153, 794, 985, 1309, 1411
Bst6I	CTCTTC	2 cut(s)	719, 1016
BstACI	GRCGYC	4 cut(s)	290, 420, 554, 815
BstAPI	GCANNNNNTGC	1 cut(s)	1388
BstBI	TTCGAA	1 cut(s)	1040
BstC8I	GCNNGC	6 cut(s)	375, 379, 552, 819, 1230, 1363
BstDEI	CTNAG	4 cut(s)	636, 822, 921, 1317
BstENI	CCTNNNNNAGG	1 cut(s)	197
BstF5I	GGATG	5 cut(s)	577, 628, 718, 1032, 1246
BstFNI	CGCG	2 cut(s)	335, 527
BstH2I	RGCGCY	4 cut(s)	293, 557, 818, 867
BstHHI	GCGC	6 cut(s)	292, 335, 529, 556, 817, 866
BstKTI	GATC	9 cut(s)	205, 339, 396, 432, 456, 538, 954, 1077, 1422
BstMAI	GTCTC	3 cut(s)	170, 803, 1330
BstMBI	GATC	9 cut(s)	202, 336, 393, 429, 453, 535, 951, 1074, 1419
BstMCI	CGRYCG	3 cut(s)	339, 396, 936
BstMWI	GCNNNNNNNGC	7 cut(s)	270, 434, 526, 1234, 1355, 1388, 1484
BstNI	CCWGG	3 cut(s)	410, 800, 1215
BstNSI	RCATGY	1 cut(s)	1391
BstSFI	CTRYAG	1 cut(s)	361
BstSLI	GKGCMC	1 cut(s)	11
BstUI	CGCG	2 cut(s)	335, 527
BstV1I	GCAGC	6 cut(s)	853, 904, 958, 1130, 1391, 1465
BstV2I	GAAGAC	2 cut(s)	584, 1199
BstX2I	RGATCY	3 cut(s)	202, 453, 1419
BstYI	RGATCY	3 cut(s)	202, 453, 1419
BstZI	CGGCCG	1 cut(s)	933
BsuI	GTATCC	1 cut(s)	1148
BsuRI	GGCC	4 cut(s)	158, 463, 935, 1085
BtsCI	GGATG	5 cut(s)	577, 628, 718, 1032, 1246
BtsIMutI	CAGTG	2 cut(s)	464, 1314
BveI	ACCTGC	2 cut(s)	278, 1340
Cac8I	GCNNGC	6 cut(s)	375, 379, 552, 819, 1230, 1363
CciI	TCATGA	1 cut(s)	538
CfoI	GCGC	6 cut(s)	292, 335, 529, 556, 817, 866
Cfr10I	RCCGGY	3 cut(s)	550, 817, 1121
Cfr13I	GGNCC	6 cut(s)	61, 97, 157, 190, 876, 1083
CseI	GACGC	2 cut(s)	355, 666
Csp6I	GTAC	3 cut(s)	32, 85, 523
CspCI	CAANNNNNGTGG	2 cut(s)	1303, 1338
CviAII	CATG	6 cut(s)	184, 539, 1066, 1291, 1388, 1404
CviQI	GTAC	3 cut(s)	32, 85, 523
DdeI	CTNAG	4 cut(s)	636, 822, 921, 1317
DinI	GGCGCC	3 cut(s)	291, 555, 816
DpnI	GATC	9 cut(s)	204, 338, 395, 431, 455, 537, 953, 1076, 1421
DpnII	GATC	9 cut(s)	202, 336, 393, 429, 453, 535, 951, 1074, 1419
DrdI	GACNNNNNNGTC	1 cut(s)	676
DseDI	GACNNNNNNGTC	1 cut(s)	676
EaeI	YGGCCR	2 cut(s)	461, 933
EagI	CGGCCG	1 cut(s)	933
Eam1104I	CTCTTC	2 cut(s)	719, 1016
EarI	CTCTTC	2 cut(s)	719, 1016
Ecl136II	GAGCTC	1 cut(s)	373
EclXI	CGGCCG	1 cut(s)	933
Eco130I	CCWWGG	1 cut(s)	1482
Eco24I	GRGCYC	1 cut(s)	375
Eco47I	GGWCC	4 cut(s)	61, 97, 190, 876
Eco47III	AGCGCT	1 cut(s)	865
Eco52I	CGGCCG	1 cut(s)	933
Eco53kI	GAGCTC	1 cut(s)	373
Eco57I	CTGAAG	1 cut(s)	743
EcoICRI	GAGCTC	1 cut(s)	373
EcoNI	CCTNNNNNAGG	1 cut(s)	197
EcoO109I	RGGNCCY	1 cut(s)	190
EcoRI	GAATTC	1 cut(s)	1177
EcoRII	CCWGG	3 cut(s)	408, 798, 1213
EcoT14I	CCWWGG	1 cut(s)	1482
EcoT38I	GRGCYC	1 cut(s)	375
EgeI	GGCGCC	3 cut(s)	291, 555, 816
EheI	GGCGCC	3 cut(s)	291, 555, 816
ErhI	CCWWGG	1 cut(s)	1482
Esp3I	CGTCTC	1 cut(s)	803
FaeI	CATG	6 cut(s)	187, 542, 1069, 1294, 1391, 1407
FalI	AAGNNNNNCTT	2 cut(s)	1184, 1216
FaqI	GGGAC	3 cut(s)	40, 952, 1041
FatI	CATG	6 cut(s)	183, 538, 1065, 1290, 1387, 1403
FauI	CCCGC	1 cut(s)	246
FbaI	TGATCA	1 cut(s)	951
FokI	GGATG	5 cut(s)	584, 635, 725, 1039, 1253
FriOI	GRGCYC	1 cut(s)	375
FspBI	CTAG	2 cut(s)	1274, 1466
GlaI	GCGC	6 cut(s)	291, 334, 528, 555, 816, 865
GsaI	CCCAGC	1 cut(s)	1236
HaeII	RGCGCY	4 cut(s)	293, 557, 818, 867
HaeIII	GGCC	4 cut(s)	158, 463, 935, 1085
HgaI	GACGC	2 cut(s)	355, 666
HhaI	GCGC	6 cut(s)	292, 335, 529, 556, 817, 866
Hin1I	GRCGYC	4 cut(s)	290, 420, 554, 815
Hin1II	CATG	6 cut(s)	187, 542, 1069, 1294, 1391, 1407
Hin6I	GCGC	6 cut(s)	290, 333, 527, 554, 815, 864
HinP1I	GCGC	6 cut(s)	290, 333, 527, 554, 815, 864
HincII	GTYRAC	2 cut(s)	343, 445
HindII	GTYRAC	2 cut(s)	343, 445
HinfI	GANTC	6 cut(s)	53, 217, 500, 542, 560, 1197
HpaI	GTTAAC	1 cut(s)	343
HphI	GGTGA	3 cut(s)	712, 1186, 1352
Hpy166II	GTNNAC	2 cut(s)	343, 445
Hpy188I	TCNGA	5 cut(s)	72, 723, 760, 835, 1424
Hpy188III	TCNNGA	6 cut(s)	41, 391, 539, 655, 1152, 1417
Hpy8I	GTNNAC	2 cut(s)	343, 445
HpyCH4III	ACNGT	6 cut(s)	84, 153, 794, 985, 1309, 1411
HpyCH4IV	ACGT	1 cut(s)	420
HpyCH4V	TGCA	3 cut(s)	748, 1379, 1403
HpyF10VI	GCNNNNNNNGC	7 cut(s)	270, 434, 526, 1234, 1355, 1388, 1484
HpyF3I	CTNAG	4 cut(s)	636, 822, 921, 1317
HpySE526I	ACGT	1 cut(s)	420
Hsp92I	GRCGYC	4 cut(s)	290, 420, 554, 815
Hsp92II	CATG	6 cut(s)	187, 542, 1069, 1294, 1391, 1407
HspAI	GCGC	6 cut(s)	290, 333, 527, 554, 815, 864
KasI	GGCGCC	3 cut(s)	289, 553, 814
KroI	GCCGGC	2 cut(s)	550, 817
KroNI	GCCGGC	2 cut(s)	552, 819
Ksp22I	TGATCA	1 cut(s)	951
KspAI	GTTAAC	1 cut(s)	343
Kzo9I	GATC	9 cut(s)	202, 336, 393, 429, 453, 535, 951, 1074, 1419
LmnI	GCTCC	2 cut(s)	892, 1030
Lsp1109I	GCAGC	6 cut(s)	853, 904, 958, 1130, 1391, 1465
LweI	GCATC	3 cut(s)	1252, 1307, 1366
MaeI	CTAG	2 cut(s)	1274, 1466
MaeII	ACGT	1 cut(s)	420
MaeIII	GTNAC	3 cut(s)	728, 979, 1309
MalI	GATC	9 cut(s)	204, 338, 395, 431, 455, 537, 953, 1076, 1421
MboI	GATC	9 cut(s)	202, 336, 393, 429, 453, 535, 951, 1074, 1419
MflI	RGATCY	3 cut(s)	202, 453, 1419
MhlI	GDGCHC	2 cut(s)	11, 375
MluCI	AATT	7 cut(s)	251, 348, 649, 695, 707, 1177, 1221
Mly113I	GGCGCC	3 cut(s)	290, 554, 815
MlyI	GAGTC	3 cut(s)	62, 551, 569
MmeI	TCCRAC	2 cut(s)	129, 768
MreI	CGCCGGCG	1 cut(s)	550
MroNI	GCCGGC	2 cut(s)	550, 817
MseI	TTAA	2 cut(s)	321, 342
MslI	CAYNNNNRTG	1 cut(s)	1335
MspA1I	CMGCKG	3 cut(s)	381, 466, 949
MvaI	CCWGG	3 cut(s)	410, 800, 1215
MvnI	CGCG	2 cut(s)	335, 527
MwoI	GCNNNNNNNGC	7 cut(s)	270, 434, 526, 1234, 1355, 1388, 1484
NaeI	GCCGGC	2 cut(s)	552, 819
NarI	GGCGCC	3 cut(s)	290, 554, 815
NciI	CCSGG	7 cut(s)	59, 89, 110, 212, 330, 937, 1035
NdeII	GATC	9 cut(s)	202, 336, 393, 429, 453, 535, 951, 1074, 1419
NgoMIV	GCCGGC	2 cut(s)	550, 817
NlaIII	CATG	6 cut(s)	187, 542, 1069, 1294, 1391, 1407
NlaIV	GGNNCC	7 cut(s)	63, 159, 291, 555, 816, 888, 1032
NmeAIII	GCCGAG	1 cut(s)	331
NmuCI	GTSAC	1 cut(s)	979
NspI	RCATGY	1 cut(s)	1391
NspV	TTCGAA	1 cut(s)	1040
PagI	TCATGA	1 cut(s)	538
PcsI	WCGNNNNNNNCGW	5 cut(s)	381, 402, 411, 677, 764
PdiI	GCCGGC	2 cut(s)	552, 819
PfeI	GAWTC	3 cut(s)	217, 500, 1197
PflFI	GACNNNGTC	2 cut(s)	194, 419
PfoI	TCCNGGA	1 cut(s)	210
Ple19I	CGATCG	2 cut(s)	339, 396
PleI	GAGTC	3 cut(s)	61, 550, 568
PluTI	GGCGCC	3 cut(s)	293, 557, 818
PpsI	GAGTC	3 cut(s)	61, 550, 568
PpuMI	RGGWCCY	1 cut(s)	190
Psp124BI	GAGCTC	1 cut(s)	375
Psp5II	RGGWCCY	1 cut(s)	190
Psp6I	CCWGG	3 cut(s)	408, 798, 1213
PspFI	CCCAGC	1 cut(s)	1232
PspGI	CCWGG	3 cut(s)	408, 798, 1213
PspN4I	GGNNCC	7 cut(s)	63, 159, 291, 555, 816, 888, 1032
PspPI	GGNCC	6 cut(s)	61, 97, 157, 190, 876, 1083
PspPPI	RGGWCCY	1 cut(s)	190
PsuI	RGATCY	3 cut(s)	202, 453, 1419
PsyI	GACNNNGTC	2 cut(s)	194, 419
PvuI	CGATCG	2 cut(s)	339, 396
PvuII	CAGCTG	1 cut(s)	949
RsaI	GTAC	3 cut(s)	33, 86, 524
RsaNI	GTAC	3 cut(s)	32, 85, 523
RseI	CAYNNNNRTG	1 cut(s)	1335
SacI	GAGCTC	1 cut(s)	375
SaqAI	TTAA	2 cut(s)	321, 342
Sau3AI	GATC	9 cut(s)	202, 336, 393, 429, 453, 535, 951, 1074, 1419
Sau96I	GGNCC	6 cut(s)	61, 97, 157, 190, 876, 1083
SchI	GAGTC	3 cut(s)	62, 551, 569
SduI	GDGCHC	2 cut(s)	11, 375
SfaNI	GCATC	3 cut(s)	1252, 1307, 1366
SfcI	CTRYAG	1 cut(s)	361
SfoI	GGCGCC	3 cut(s)	291, 555, 816
SfuI	TTCGAA	1 cut(s)	1040
SgrAI	CRCCGGYG	1 cut(s)	550
SinI	GGWCC	4 cut(s)	61, 97, 190, 876
SmiMI	CAYNNNNRTG	1 cut(s)	1335
Sse9I	AATT	7 cut(s)	251, 348, 649, 695, 707, 1177, 1221
SsiI	CCGC	9 cut(s)	239, 293, 303, 381, 400, 464, 932, 1169, 1358
SspDI	GGCGCC	3 cut(s)	289, 553, 814
SspMI	CTAG	2 cut(s)	1274, 1466
SstI	GAGCTC	1 cut(s)	375
StyI	CCWWGG	1 cut(s)	1482
TaaI	ACNGT	6 cut(s)	84, 153, 794, 985, 1309, 1411
TaiI	ACGT	1 cut(s)	423
TaqI	TCGA	8 cut(s)	128, 180, 198, 369, 392, 495, 680, 1040
TasI	AATT	7 cut(s)	251, 348, 649, 695, 707, 1177, 1221
TauI	GCSGC	7 cut(s)	295, 305, 384, 403, 466, 935, 1361
TfiI	GAWTC	3 cut(s)	217, 500, 1197
Tru1I	TTAA	2 cut(s)	321, 342
Tru9I	TTAA	2 cut(s)	321, 342
TscAI	CASTG	2 cut(s)	464, 1321
TseFI	GTSAC	1 cut(s)	979
TseI	GCWGC	6 cut(s)	866, 917, 946, 1118, 1379, 1478
Tsp45I	GTSAC	1 cut(s)	979
TspDTI	ATGAA	4 cut(s)	200, 866, 1031, 1448
TspGWI	ACGGA	2 cut(s)	273, 678
TspRI	CASTG	2 cut(s)	464, 1321
Tth111I	GACNNNGTC	2 cut(s)	194, 419
VpaK11BI	GGWCC	4 cut(s)	61, 97, 190, 876
XagI	CCTNNNNNAGG	1 cut(s)	197
XapI	RAATTY	2 cut(s)	1177, 1221
XceI	RCATGY	1 cut(s)	1391
XspI	CTAG	2 cut(s)	1274, 1466
ZraI	GACGTC	1 cut(s)	421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.