Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002216

Physical Location & Seq

Genomic Coordinates Reverse (-)

15407026 .. 15410218

Gene Structure 3193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g21450.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGAGAAAGGTGGAAGCTTTGGAGTTGGGTTTTCGGCTAGTGGTTGTTTTGGTCGTGGGGTGTTTGTGTAGGCAACCCACCTTTAATCCTACTTGGCATTATCATAAAACTGCCACGTGTCATACCAACTCAGGTCACCATCTCGAGAAAAGTCCGATCGCCAAGGTCCCATCCATCTTCTTCCTCCATCATTTCGCTTCGCCTGAAACCCTAATCTTCTCCAATCATAGACAAACAGAAGAAATCACAGCCATGGCGAACCCTAACCCCGCTCCCAAACAGCACCTCTACCCGGAGATCATCCACTCGAACCCAGAAGCACGTTCAATCCCTACCTCCTCAGCCCCAAATCTCTACCCTTCCCTCGACATGAAAGACCTCTACGAAAATCTATTCCCCAGAAACCCTAACCCTACCTACCAATACCAACCCTCTGCTCCGTCTGAGGCATCGGCTCCACCGTCGGCACCGCCTGTGGCCACCGAAGAGGTTCTCATCAAAATCCCCGGCGCCATTGTTAATTTAATCGACACGCACTACAGTGTTGAGCTCGCCTCCGGCGACTTCACGATCATACGCCTCGTCCAGGGCGACGACATCGTCGCCATCCTTGCCCGAGTTGGCGATGAGATCCAGTGGCCTCTGGCTAAGGACGAAGGCGCCGTCAAGCTCGACGACTCGCATTACTTCTTCTCTCTCTACGCCCCGCCGGATTCCGACTCCGGGCCCGGATCGGACCCGAAAGCGAAGACGAACGATCTGGACAATTTTTTGAACTACGGATTGACGATTGCGTCGAAAGGGCAGGAGGGATTGGTGAAGGAATTGGATGGGATTTTGAAGAGTTACTGCAGTTTTTCGGTTCAGAAGGTTTCGGATAAGGCGAAGAAGAAAGGGGAGGCGTTGGACGATACCCTGGCGTTGGAGACCTCGCCGGAGGAGTTGAGCTCGGAGAAGAAAAAGGAGTTGGAGGAGCGGAGCGCCGCGTATTGGACCACATTGGCGCCGAATGTGGAGGATTACAATGGGAGGGCTGCCAAGTTGATCGCGGCCGGGTCGGGACAGCTGATCAAGGGCATATTGTGGTGTGGGGATGTGACGGTGGAGAGGTTGAAATTGGGGAATGAGGTTATGAAGAAGCGGATGGATCCGCGGTCGAATAAGGAAGTCAGTCCCCAAACCATGAGGAGGATTAAAAGGGTTAAGAAGGTGAGCAAAACGACACAGAAAGTTGCAGCTGGTGTCCTTTCTGGGGTTTTGAAAGTTTCCGGATACTTAACAAGTTCGGTGGTAAATTCCAAACTGGGAAAGAAGTTCTTCCGTCATCTGCCTGGGGAAATTTTGCTAGCATCGCTGGATGGATTTTGCAAAGTGTGTGATGCTGTTGAAGTTGCCGGGAAAAATGTCATGGCAACGTCATCTACTGTAACAACTGACCTCGTCTCCCACAGGTATGGTGAACAAGCAGGTAAGGCTGCAAACGACGGGCTTGATGCAGCAGGACATGCTGTCGGAACTGCGTGGACTGTTTTTAAGATACGAAAAGCACTCAACCCAAAAAGCGCTTTCAAATCCACCACCCTAGCCAAATCTGCTGCTAAGGCAGCAGCTGAGGAGGAAAGAACTAAGAAATCCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006970 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009642 GO:0009644 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0016020 GO:0030054 GO:0033993 GO:0042221 GO:0043207 GO:0044464 GO:0048511 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Senescence

Protein Analysis

547

Amino Acids

59.49

Weight (kDa)

8.76

Isoelectric Point (pI)

35.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002216)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17840 AT2G17840 AT3G51250 AT3G51250 AT4G35985 AT4G35985 AT4G35985
fragaria_vesca	FvH4_1g11540 FvH4_1g11540 FvH4_1g11540 FvH4_1g11540 FvH4_2g01340 FvH4_2g01340 FvH4_2g01340
malus_domestica	MD02G1128400.v1.1 MD10G1123700.v1.1 MD15G1243600.v1.1
prunus_persica	Prupe.7G170600_v2.0.a1 Prupe.8G164100_v2.0.a1
pyrus_communis	pycom10g10590 pycom15g21450
rosa_chinensis	RchiOBHm_Chr2g0099181 RchiOBHm_Chr6g0252261
rosa_laevigata	RLG00000015400 RLG00000016853
rosa_multiflora	Rmu_co7982236.1_g000001 Rmu_sc0006252.1_g000017 Rmu_sc0006878.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143380 Rroxscaffold_7G00216200
rosa_rugosa	Rorug02G0077500 Rorug05G0506500 Rorug05G0506600
rosa_samantha	Rh2AG126400 Rh2BG129600 Rh2CG130600 Rh2DG131000 Rh6AG020300 Rh6BG015900 Rh6CG013100 Rh6DG014400
rosa_wichuraiana	Rw2G009750 Rw6G001670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	599, 793
Acc36I	ACCTGC	1 cut(s)	1457
AccB1I	GGYRCC	4 cut(s)	466, 509, 659, 1003
AccBSI	CCGCTC	2 cut(s)	272, 976
AccII	CGCG	3 cut(s)	986, 1049, 1153
AccIII	TCCGGA	1 cut(s)	1268
AciI	CCGC	9 cut(s)	270, 470, 707, 976, 984, 1049, 1141, 1151, 1153
AclWI	GGATC	4 cut(s)	625, 739, 1142, 1155
AcoI	YGGCCR	2 cut(s)	477, 1050
AcsI	RAATTY	2 cut(s)	1294, 1338
AcvI	CACGTG	1 cut(s)	117
AcyI	GRCGYC	3 cut(s)	510, 660, 1004
AfeI	AGCGCT	1 cut(s)	1564
AfiI	CCNNNNNNNGG	7 cut(s)	292, 586, 723, 922, 990, 1188, 1252
AflIII	ACRYGT	1 cut(s)	116
AgsI	TTSAA	7 cut(s)	327, 775, 841, 1114, 1261, 1388, 1570
AhdI	GACNNNNNGTC	1 cut(s)	1508
AjnI	CCWGG	3 cut(s)	585, 915, 1330
AjuI	GAANNNNNNNTTGG	2 cut(s)	950, 982
AleI	CACNNNNGTG	1 cut(s)	540
AluBI	AGCT	7 cut(s)	17, 550, 670, 948, 1066, 1238, 1610
AluI	AGCT	7 cut(s)	17, 550, 670, 948, 1066, 1238, 1610
Alw21I	GWGCWC	2 cut(s)	552, 950
Alw26I	GTCTC	2 cut(s)	920, 1447
AlwI	GGATC	4 cut(s)	625, 739, 1142, 1155
AlwNI	CAGNNNCTG	1 cut(s)	1610
Ama87I	CYCGRG	2 cut(s)	143, 615
Aor13HI	TCCGGA	1 cut(s)	1268
Aor51HI	AGCGCT	1 cut(s)	1564
AoxI	GGCC	4 cut(s)	477, 638, 725, 1050
ApaI	GGGCCC	1 cut(s)	729
ApeKI	GCWGC	7 cut(s)	1034, 1235, 1475, 1496, 1595, 1604, 1607
ApoI	RAATTY	2 cut(s)	1294, 1338
ArsI	GACNNNNNNTTYG	2 cut(s)	648, 680
Asp700I	GAANNNNTTC	2 cut(s)	489, 1316
AspLEI	GCGC	5 cut(s)	512, 662, 983, 1006, 1565
AspS9I	GGNCC	5 cut(s)	166, 725, 726, 736, 993
AsuC2I	CCSGG	6 cut(s)	293, 507, 724, 729, 1054, 1396
AsuHPI	GGTGA	4 cut(s)	128, 829, 1222, 1469
AsuNHI	GCTAGC	1 cut(s)	1345
AvaI	CYCGRG	2 cut(s)	143, 615
AvaII	GGWCC	3 cut(s)	166, 736, 993
BaeGI	GKGCMC	1 cut(s)	729
BalI	TGGCCA	1 cut(s)	479
BamHI	GGATCC	1 cut(s)	1147
BanI	GGYRCC	4 cut(s)	466, 509, 659, 1003
BanII	GRGCYC	3 cut(s)	552, 729, 950
BbrPI	CACGTG	1 cut(s)	117
BbsI	GAAGAC	1 cut(s)	755
Bbv12I	GWGCWC	2 cut(s)	552, 950
BbvCI	CCTCAGC	2 cut(s)	340, 1611
BbvI	GCAGC	7 cut(s)	1021, 1247, 1462, 1508, 1582, 1616, 1619
BccI	CCATC	8 cut(s)	147, 178, 182, 195, 614, 824, 1138, 1352
BceAI	ACGGC	1 cut(s)	647
BciT130I	CCWGG	3 cut(s)	587, 917, 1332
BciVI	GTATCC	1 cut(s)	1265
BclI	TGATCA	1 cut(s)	1068
BcnI	CCSGG	6 cut(s)	293, 507, 724, 729, 1054, 1396
BcoDI	GTCTC	2 cut(s)	920, 1447
BfaI	CTAG	3 cut(s)	38, 1346, 1583
BfmI	CTRYAG	2 cut(s)	538, 850
BfoI	RGCGCY	5 cut(s)	513, 663, 984, 1007, 1566
BfuAI	ACCTGC	1 cut(s)	1457
BfuI	GTATCC	1 cut(s)	1265
BisI	GCNGC	9 cut(s)	984, 1035, 1050, 1236, 1476, 1497, 1596, 1605, 1608
BlsI	GCNGC	9 cut(s)	985, 1036, 1051, 1237, 1477, 1498, 1597, 1606, 1609
Bme1390I	CCNGG	9 cut(s)	293, 507, 587, 724, 729, 917, 1054, 1332, 1396
Bme18I	GGWCC	3 cut(s)	166, 736, 993
BmeRI	GACNNNNNGTC	1 cut(s)	1508
BmeT110I	CYCGRG	2 cut(s)	143, 615
BmgT120I	GGNCC	5 cut(s)	166, 725, 726, 736, 993
BmiI	GGNNCC	9 cut(s)	168, 456, 468, 511, 661, 727, 738, 1005, 1149
BmrFI	CCNGG	9 cut(s)	293, 507, 587, 724, 729, 917, 1054, 1332, 1396
BmrI	ACTGGG	1 cut(s)	1313
BmsI	GCATC	4 cut(s)	458, 1358, 1369, 1483
BmtI	GCTAGC	1 cut(s)	1349
BmuI	ACTGGG	1 cut(s)	1313
BpiI	GAAGAC	1 cut(s)	755
BplI	GAGNNNNNCTC	4 cut(s)	539, 571, 932, 964
Bpu10I	CCTNAGC	4 cut(s)	340, 648, 1599, 1611
BpuMI	CCSGG	6 cut(s)	293, 507, 724, 729, 1054, 1396
BsaAI	YACGTR	1 cut(s)	117
BsaHI	GRCGYC	3 cut(s)	510, 660, 1004
BsaI	GGTCTC	1 cut(s)	920
BsaJI	CCNNGG	7 cut(s)	162, 252, 505, 586, 915, 1151, 1331
BsaWI	WCCGGW	1 cut(s)	1268
BsaXI	ACNNNNNCTCC	2 cut(s)	1427, 1457
Bsc4I	CCNNNNNNNGG	7 cut(s)	292, 586, 723, 922, 990, 1188, 1252
Bse1I	ACTGG	2 cut(s)	634, 1308
BseAI	TCCGGA	1 cut(s)	1268
BseBI	CCWGG	3 cut(s)	587, 917, 1332
BseDI	CCNNGG	7 cut(s)	162, 252, 505, 586, 915, 1151, 1331
BseGI	GGATG	7 cut(s)	170, 300, 606, 835, 1099, 1149, 1363
BseLI	CCNNNNNNNGG	7 cut(s)	292, 586, 723, 922, 990, 1188, 1252
BseMII	CTCAG	4 cut(s)	144, 354, 435, 1602
BseNI	ACTGG	2 cut(s)	634, 1308
BseRI	GAGGAG	5 cut(s)	328, 953, 986, 1201, 1628
BseSI	GKGCMC	1 cut(s)	729
BseX3I	CGGCCG	1 cut(s)	1050
BseXI	GCAGC	7 cut(s)	1021, 1247, 1462, 1508, 1582, 1616, 1619
Bsh1236I	CGCG	3 cut(s)	986, 1049, 1153
Bsh1285I	CGRYCG	3 cut(s)	159, 1053, 1157
BshFI	GGCC	4 cut(s)	479, 640, 727, 1052
BshNI	GGYRCC	4 cut(s)	466, 509, 659, 1003
BsiEI	CGRYCG	3 cut(s)	159, 1053, 1157
BsiHKAI	GWGCWC	2 cut(s)	552, 950
BsiHKCI	CYCGRG	2 cut(s)	143, 615
BslFI	GGGAC	3 cut(s)	152, 1074, 1158
BslI	CCNNNNNNNGG	7 cut(s)	292, 586, 723, 922, 990, 1188, 1252
BsmAI	GTCTC	2 cut(s)	920, 1447
BsmBI	CGTCTC	1 cut(s)	1447
BsmFI	GGGAC	3 cut(s)	152, 1074, 1158
BsnI	GGCC	4 cut(s)	479, 640, 727, 1052
Bso31I	GGTCTC	1 cut(s)	920
BsoBI	CYCGRG	2 cut(s)	143, 615
Bsp120I	GGGCCC	1 cut(s)	725
Bsp1286I	GDGCHC	3 cut(s)	552, 729, 950
Bsp13I	TCCGGA	1 cut(s)	1268
Bsp143I	GATC	9 cut(s)	156, 297, 570, 630, 731, 757, 1044, 1068, 1147
Bsp19I	CCATGG	1 cut(s)	252
BspACI	CCGC	9 cut(s)	270, 470, 707, 976, 984, 1049, 1141, 1151, 1153
BspANI	GGCC	4 cut(s)	479, 640, 727, 1052
BspCNI	CTCAG	4 cut(s)	143, 353, 436, 1603
BspEI	TCCGGA	1 cut(s)	1268
BspFNI	CGCG	3 cut(s)	986, 1049, 1153
BspLI	GGNNCC	9 cut(s)	168, 456, 468, 511, 661, 727, 738, 1005, 1149
BspMAI	CTGCAG	1 cut(s)	854
BspMI	ACCTGC	1 cut(s)	1457
BspOI	GCTAGC	1 cut(s)	1349
BspPI	GGATC	4 cut(s)	625, 739, 1142, 1155
BspT107I	GGYRCC	4 cut(s)	466, 509, 659, 1003
BspTNI	GGTCTC	1 cut(s)	920
BsrBI	CCGCTC	2 cut(s)	272, 976
BsrI	ACTGG	2 cut(s)	634, 1308
BssECI	CCNNGG	7 cut(s)	162, 252, 505, 586, 915, 1151, 1331
BssMI	GATC	9 cut(s)	156, 297, 570, 630, 731, 757, 1044, 1068, 1147
BssNI	GRCGYC	3 cut(s)	510, 660, 1004
BssT1I	CCWWGG	2 cut(s)	162, 252
Bst2UI	CCWGG	3 cut(s)	587, 917, 1332
Bst4CI	ACNGT	5 cut(s)	462, 542, 1102, 1426, 1528
Bst6I	CTCTTC	2 cut(s)	480, 836
BstACI	GRCGYC	3 cut(s)	510, 660, 1004
BstAPI	GCANNNNNTGC	1 cut(s)	1505
BstBAI	YACGTR	1 cut(s)	117
BstC8I	GCNNGC	2 cut(s)	552, 1347
BstDEI	CTNAG	7 cut(s)	130, 340, 444, 648, 1599, 1611, 1626
BstDSI	CCRYGG	2 cut(s)	252, 1151
BstEII	GGTNACC	1 cut(s)	134
BstENI	CCTNNNNNAGG	1 cut(s)	584
BstF5I	GGATG	7 cut(s)	170, 300, 606, 835, 1099, 1149, 1363
BstFNI	CGCG	3 cut(s)	986, 1049, 1153
BstH2I	RGCGCY	5 cut(s)	513, 663, 984, 1007, 1566
BstHHI	GCGC	5 cut(s)	512, 662, 983, 1006, 1565
BstKTI	GATC	9 cut(s)	159, 300, 573, 633, 734, 760, 1047, 1071, 1150
BstMAI	GTCTC	2 cut(s)	920, 1447
BstMBI	GATC	9 cut(s)	156, 297, 570, 630, 731, 757, 1044, 1068, 1147
BstMCI	CGRYCG	3 cut(s)	159, 1053, 1157
BstMWI	GCNNNNNNNGC	7 cut(s)	611, 1351, 1472, 1505, 1592, 1601, 1604
BstNI	CCWGG	3 cut(s)	587, 917, 1332
BstNSI	RCATGY	1 cut(s)	1508
BstPI	GGTNACC	1 cut(s)	134
BstSCI	CCNGG	9 cut(s)	291, 505, 585, 722, 727, 915, 1052, 1330, 1394
BstSFI	CTRYAG	2 cut(s)	538, 850
BstSLI	GKGCMC	1 cut(s)	729
BstUI	CGCG	3 cut(s)	986, 1049, 1153
BstV1I	GCAGC	7 cut(s)	1021, 1247, 1462, 1508, 1582, 1616, 1619
BstV2I	GAAGAC	1 cut(s)	755
BstX2I	RGATCY	2 cut(s)	630, 1147
BstXI	CCANNNNNNTGG	1 cut(s)	1454
BstYI	RGATCY	2 cut(s)	630, 1147
BstZI	CGGCCG	1 cut(s)	1050
BsuI	GTATCC	1 cut(s)	1265
BsuRI	GGCC	4 cut(s)	479, 640, 727, 1052
BtgI	CCRYGG	2 cut(s)	252, 1151
BtgZI	GCGATG	2 cut(s)	639, 1335
BtsCI	GGATG	7 cut(s)	170, 300, 606, 835, 1099, 1149, 1363
BtsIMutI	CAGTG	2 cut(s)	547, 641
BveI	ACCTGC	1 cut(s)	1457
Cac8I	GCNNGC	2 cut(s)	552, 1347
CaiI	CAGNNNCTG	1 cut(s)	1610
CfoI	GCGC	5 cut(s)	512, 662, 983, 1006, 1565
Cfr13I	GGNCC	5 cut(s)	166, 725, 726, 736, 993
Cfr42I	CCGCGG	1 cut(s)	1154
CseI	GACGC	1 cut(s)	783
CspCI	CAANNNNNGTGG	2 cut(s)	1269, 1304
CviAII	CATG	5 cut(s)	253, 370, 1183, 1408, 1505
DdeI	CTNAG	7 cut(s)	130, 340, 444, 648, 1599, 1611, 1626
DinI	GGCGCC	3 cut(s)	511, 661, 1005
DpnI	GATC	9 cut(s)	158, 299, 572, 632, 733, 759, 1046, 1070, 1149
DpnII	GATC	9 cut(s)	156, 297, 570, 630, 731, 757, 1044, 1068, 1147
DrdI	GACNNNNNNGTC	2 cut(s)	599, 793
DriI	GACNNNNNGTC	1 cut(s)	1508
DseDI	GACNNNNNNGTC	2 cut(s)	599, 793
EaeI	YGGCCR	2 cut(s)	477, 1050
EagI	CGGCCG	1 cut(s)	1050
Eam1104I	CTCTTC	2 cut(s)	480, 836
Eam1105I	GACNNNNNGTC	1 cut(s)	1508
EarI	CTCTTC	2 cut(s)	480, 836
Ecl136II	GAGCTC	2 cut(s)	550, 948
EclXI	CGGCCG	1 cut(s)	1050
Eco130I	CCWWGG	2 cut(s)	162, 252
Eco24I	GRGCYC	3 cut(s)	552, 729, 950
Eco31I	GGTCTC	1 cut(s)	920
Eco47I	GGWCC	3 cut(s)	166, 736, 993
Eco47III	AGCGCT	1 cut(s)	1564
Eco52I	CGGCCG	1 cut(s)	1050
Eco53kI	GAGCTC	2 cut(s)	550, 948
Eco72I	CACGTG	1 cut(s)	117
Eco88I	CYCGRG	2 cut(s)	143, 615
Eco91I	GGTNACC	1 cut(s)	134
EcoICRI	GAGCTC	2 cut(s)	550, 948
EcoNI	CCTNNNNNAGG	1 cut(s)	584
EcoO109I	RGGNCCY	1 cut(s)	166
EcoO65I	GGTNACC	1 cut(s)	134
EcoRII	CCWGG	3 cut(s)	585, 915, 1330
EcoT14I	CCWWGG	2 cut(s)	162, 252
EcoT38I	GRGCYC	3 cut(s)	552, 729, 950
EgeI	GGCGCC	3 cut(s)	511, 661, 1005
EheI	GGCGCC	3 cut(s)	511, 661, 1005
ErhI	CCWWGG	2 cut(s)	162, 252
Esp3I	CGTCTC	1 cut(s)	1447
FaeI	CATG	5 cut(s)	256, 373, 1186, 1411, 1508
FalI	AAGNNNNNCTT	2 cut(s)	1301, 1333
FaqI	GGGAC	3 cut(s)	152, 1074, 1158
FatI	CATG	5 cut(s)	252, 369, 1182, 1407, 1504
FauI	CCCGC	2 cut(s)	277, 714
FbaI	TGATCA	1 cut(s)	1068
Fnu4HI	GCNGC	9 cut(s)	984, 1035, 1050, 1236, 1476, 1497, 1596, 1605, 1608
FokI	GGATG	7 cut(s)	157, 287, 593, 842, 1106, 1156, 1370
FriOI	GRGCYC	3 cut(s)	552, 729, 950
Fsp4HI	GCNGC	9 cut(s)	984, 1035, 1050, 1236, 1476, 1497, 1596, 1605, 1608
FspBI	CTAG	3 cut(s)	38, 1346, 1583
GlaI	GCGC	5 cut(s)	511, 661, 982, 1005, 1564
GluI	GCNGC	9 cut(s)	984, 1035, 1050, 1236, 1476, 1497, 1596, 1605, 1608
HaeII	RGCGCY	5 cut(s)	513, 663, 984, 1007, 1566
HaeIII	GGCC	4 cut(s)	479, 640, 727, 1052
HgaI	GACGC	1 cut(s)	783
HhaI	GCGC	5 cut(s)	512, 662, 983, 1006, 1565
Hin1I	GRCGYC	3 cut(s)	510, 660, 1004
Hin1II	CATG	5 cut(s)	256, 373, 1186, 1411, 1508
Hin6I	GCGC	5 cut(s)	510, 660, 981, 1004, 1563
HinP1I	GCGC	5 cut(s)	510, 660, 981, 1004, 1563
HindIII	AAGCTT	1 cut(s)	15
HinfI	GANTC	3 cut(s)	677, 713, 719
HphI	GGTGA	4 cut(s)	128, 829, 1222, 1469
Hpy166II	GTNNAC	2 cut(s)	1460, 1524
Hpy188I	TCNGA	8 cut(s)	156, 445, 718, 736, 867, 877, 952, 1514
Hpy188III	TCNNGA	6 cut(s)	143, 145, 568, 761, 1059, 1269
Hpy8I	GTNNAC	2 cut(s)	1460, 1524
Hpy99I	CGWCG	6 cut(s)	466, 596, 605, 677, 799, 1487
HpyAV	CCTTC	5 cut(s)	369, 650, 814, 862, 1201
HpyCH4III	ACNGT	5 cut(s)	462, 542, 1102, 1426, 1528
HpyCH4IV	ACGT	3 cut(s)	116, 322, 1415
HpyCH4V	TGCA	5 cut(s)	852, 1235, 1368, 1478, 1496
HpyF10VI	GCNNNNNNNGC	7 cut(s)	611, 1351, 1472, 1505, 1592, 1601, 1604
HpyF3I	CTNAG	7 cut(s)	130, 340, 444, 648, 1599, 1611, 1626
HpySE526I	ACGT	3 cut(s)	116, 322, 1415
Hsp92I	GRCGYC	3 cut(s)	510, 660, 1004
Hsp92II	CATG	5 cut(s)	256, 373, 1186, 1411, 1508
HspAI	GCGC	5 cut(s)	510, 660, 981, 1004, 1563
KasI	GGCGCC	3 cut(s)	509, 659, 1003
Kpn2I	TCCGGA	1 cut(s)	1268
Ksp22I	TGATCA	1 cut(s)	1068
KspI	CCGCGG	1 cut(s)	1154
Kzo9I	GATC	9 cut(s)	156, 297, 570, 630, 731, 757, 1044, 1068, 1147
LmnI	GCTCC	5 cut(s)	277, 442, 460, 973, 978
Lsp1109I	GCAGC	7 cut(s)	1021, 1247, 1462, 1508, 1582, 1616, 1619
LweI	GCATC	4 cut(s)	458, 1358, 1369, 1483
MaeI	CTAG	3 cut(s)	38, 1346, 1583
MaeII	ACGT	3 cut(s)	116, 322, 1415
MaeIII	GTNAC	4 cut(s)	134, 845, 1096, 1426
MalI	GATC	9 cut(s)	158, 299, 572, 632, 733, 759, 1046, 1070, 1149
MbiI	CCGCTC	2 cut(s)	272, 976
MboI	GATC	9 cut(s)	156, 297, 570, 630, 731, 757, 1044, 1068, 1147
MflI	RGATCY	2 cut(s)	630, 1147
MhlI	GDGCHC	3 cut(s)	552, 729, 950
MlsI	TGGCCA	1 cut(s)	479
MluCI	AATT	6 cut(s)	520, 766, 824, 1115, 1294, 1338
MluNI	TGGCCA	1 cut(s)	479
Mly113I	GGCGCC	3 cut(s)	510, 660, 1004
MlyI	GAGTC	2 cut(s)	671, 713
MmeI	TCCRAC	5 cut(s)	741, 885, 903, 948, 1492
Mox20I	TGGCCA	1 cut(s)	479
MroI	TCCGGA	1 cut(s)	1268
MroXI	GAANNNNTTC	2 cut(s)	489, 1316
MscI	TGGCCA	1 cut(s)	479
MseI	TTAA	7 cut(s)	84, 519, 524, 1194, 1203, 1277, 1533
MslI	CAYNNNNRTG	3 cut(s)	251, 540, 1452
Msp20I	TGGCCA	1 cut(s)	479
MspA1I	CMGCKG	4 cut(s)	1066, 1153, 1238, 1610
MspR9I	CCNGG	9 cut(s)	293, 507, 587, 724, 729, 917, 1054, 1332, 1396
MvaI	CCWGG	3 cut(s)	587, 917, 1332
MvnI	CGCG	3 cut(s)	986, 1049, 1153
MwoI	GCNNNNNNNGC	7 cut(s)	611, 1351, 1472, 1505, 1592, 1601, 1604
NarI	GGCGCC	3 cut(s)	510, 660, 1004
NciI	CCSGG	6 cut(s)	293, 507, 724, 729, 1054, 1396
NcoI	CCATGG	1 cut(s)	252
NdeII	GATC	9 cut(s)	156, 297, 570, 630, 731, 757, 1044, 1068, 1147
NheI	GCTAGC	1 cut(s)	1345
NlaIII	CATG	5 cut(s)	256, 373, 1186, 1411, 1508
NlaIV	GGNNCC	9 cut(s)	168, 456, 468, 511, 661, 727, 738, 1005, 1149
NmuCI	GTSAC	2 cut(s)	134, 1096
NspI	RCATGY	1 cut(s)	1508
OliI	CACNNNNGTG	1 cut(s)	540
PaeR7I	CTCGAG	1 cut(s)	143
PcsI	WCGNNNNNNNCGW	6 cut(s)	458, 558, 588, 660, 794, 881
PdmI	GAANNNNTTC	2 cut(s)	489, 1316
PfeI	GAWTC	1 cut(s)	713
PflFI	GACNNNGTC	2 cut(s)	599, 1439
PkrI	GCNGC	9 cut(s)	985, 1036, 1051, 1237, 1477, 1498, 1597, 1606, 1609
Ple19I	CGATCG	1 cut(s)	159
PleI	GAGTC	2 cut(s)	671, 713
PluTI	GGCGCC	3 cut(s)	513, 663, 1007
PmaCI	CACGTG	1 cut(s)	117
PmlI	CACGTG	1 cut(s)	117
PpsI	GAGTC	2 cut(s)	671, 713
Ppu21I	YACGTR	1 cut(s)	117
PpuMI	RGGWCCY	1 cut(s)	166
Psp124BI	GAGCTC	2 cut(s)	552, 950
Psp5II	RGGWCCY	1 cut(s)	166
Psp6I	CCWGG	3 cut(s)	585, 915, 1330
PspCI	CACGTG	1 cut(s)	117
PspEI	GGTNACC	1 cut(s)	134
PspGI	CCWGG	3 cut(s)	585, 915, 1330
PspN4I	GGNNCC	9 cut(s)	168, 456, 468, 511, 661, 727, 738, 1005, 1149
PspOMI	GGGCCC	1 cut(s)	725
PspPI	GGNCC	5 cut(s)	166, 725, 726, 736, 993
PspPPI	RGGWCCY	1 cut(s)	166
PstI	CTGCAG	1 cut(s)	854
PstNI	CAGNNNCTG	1 cut(s)	1610
PsuI	RGATCY	2 cut(s)	630, 1147
PsyI	GACNNNGTC	2 cut(s)	599, 1439
PvuI	CGATCG	1 cut(s)	159
PvuII	CAGCTG	3 cut(s)	1066, 1238, 1610
RseI	CAYNNNNRTG	3 cut(s)	251, 540, 1452
SacI	GAGCTC	2 cut(s)	552, 950
SacII	CCGCGG	1 cut(s)	1154
SaqAI	TTAA	7 cut(s)	84, 519, 524, 1194, 1203, 1277, 1533
SatI	GCNGC	9 cut(s)	984, 1035, 1050, 1236, 1476, 1497, 1596, 1605, 1608
Sau3AI	GATC	9 cut(s)	156, 297, 570, 630, 731, 757, 1044, 1068, 1147
Sau96I	GGNCC	5 cut(s)	166, 725, 726, 736, 993
SchI	GAGTC	2 cut(s)	671, 713
ScrFI	CCNGG	9 cut(s)	293, 507, 587, 724, 729, 917, 1054, 1332, 1396
SduI	GDGCHC	3 cut(s)	552, 729, 950
SfaNI	GCATC	4 cut(s)	458, 1358, 1369, 1483
SfcI	CTRYAG	2 cut(s)	538, 850
SfoI	GGCGCC	3 cut(s)	511, 661, 1005
Sfr274I	CTCGAG	1 cut(s)	143
Sfr303I	CCGCGG	1 cut(s)	1154
SgrBI	CCGCGG	1 cut(s)	1154
SinI	GGWCC	3 cut(s)	166, 736, 993
SlaI	CTCGAG	1 cut(s)	143
SmiMI	CAYNNNNRTG	3 cut(s)	251, 540, 1452
SmlI	CTYRAG	1 cut(s)	143
SmoI	CTYRAG	1 cut(s)	143
Sse9I	AATT	6 cut(s)	520, 766, 824, 1115, 1294, 1338
SsiI	CCGC	9 cut(s)	270, 470, 707, 976, 984, 1049, 1141, 1151, 1153
SspDI	GGCGCC	3 cut(s)	509, 659, 1003
SspMI	CTAG	3 cut(s)	38, 1346, 1583
SstI	GAGCTC	2 cut(s)	552, 950
StyD4I	CCNGG	9 cut(s)	291, 505, 585, 722, 727, 915, 1052, 1330, 1394
StyI	CCWWGG	2 cut(s)	162, 252
TaaI	ACNGT	5 cut(s)	462, 542, 1102, 1426, 1528
TaiI	ACGT	3 cut(s)	119, 325, 1418
TaqI	TCGA	7 cut(s)	144, 308, 366, 528, 672, 797, 1157
TasI	AATT	6 cut(s)	520, 766, 824, 1115, 1294, 1338
TauI	GCSGC	2 cut(s)	986, 1052
TfiI	GAWTC	1 cut(s)	713
Tru1I	TTAA	7 cut(s)	84, 519, 524, 1194, 1203, 1277, 1533
Tru9I	TTAA	7 cut(s)	84, 519, 524, 1194, 1203, 1277, 1533
TscAI	CASTG	2 cut(s)	547, 641
TseFI	GTSAC	2 cut(s)	134, 1096
TseI	GCWGC	7 cut(s)	1034, 1235, 1475, 1496, 1595, 1604, 1607
Tsp45I	GTSAC	2 cut(s)	134, 1096
TspDTI	ATGAA	2 cut(s)	386, 1148
TspGWI	ACGGA	3 cut(s)	429, 795, 1310
TspRI	CASTG	2 cut(s)	547, 641
Tth111I	GACNNNGTC	2 cut(s)	599, 1439
VpaK11BI	GGWCC	3 cut(s)	166, 736, 993
XagI	CCTNNNNNAGG	1 cut(s)	584
XapI	RAATTY	2 cut(s)	1294, 1338
XceI	RCATGY	1 cut(s)	1508
XhoI	CTCGAG	1 cut(s)	143
XmnI	GAANNNNTTC	2 cut(s)	489, 1316
XspI	CTAG	3 cut(s)	38, 1346, 1583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.