Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002216

Physical Location & Seq

Genomic Coordinates Forward (+)

81424825 .. 81428236

Gene Structure 3412 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00143380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGAGTGCCCCAAACCTAAACCTAATCGGCCCGACCTGCCACGAACCGCCGTCGGCGCCCCCGTCGCCGCCGAGGAGGTTCTTATTAAGATCCCCGGCGCGATCGTTAACCTAATTGATAAGAACTACAGCGTCGAGCTCGCCAGCGGCGACTTCTCGATCGTGCGGCTCGTCCAAGGCGACGACGTCGTTGCGATCCTCGCCCGTGTAGATGATGAGATCCAGTGGCCGCTGTTGAAGGACGAAGGAGTGGTCAAGCTCGACGATTCGCATTACTTTTTCTCGCTGTACGCGCCGGAGGATCATGAGTCGTCGACGCCGGCGCCGGAGTCCCGCGAGGATGAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAGGATGAGAAGAAAACTAAGGAGGCTGATAATTTCTTGAACTACGGATTGACGATTGCGTCGAAAGGGCAGGAGAAATTGGTGAAGGAATTGGATGAGGTTTTGAAGAGTTACAGCAGTTTTTCGGTGCAGAAGGTTTCGGAGAAGGCGAAGAAGAAGGGGGAGGCATTGGATAGTTCCCTGGCATTGGGGACTGCGCCGGCGGAGTTGAGTTCGGAGAAGAAGAAGGAGATGAAGGAGCAGAGCGCTGCGTATTGGACCACATTGGCTCCCAATGTGGAGGACTATAATGGAAGTGCTGCTAAGTTGATTGCAGCCGGGACGGGGCAGCTGATCAGGGGGATTTTGTGGTGTGGAGATGTCACGGTGGAGAGGTTGAAATGGGGAAATGAGGTTATGAAGAAGAGGATGGAGCCGGGTTTGAATAAGGAAATCAGTCCCCAAACCATGAGGAGGATCAAAAGGTATAAGATGATGACCCAATATCTTGTTTTGCGTGATTGTCTTTACTATTTGGATTCTCTGGGTCTAATGCTTTTGAGGCGGTTAGTAGTCAAAGATTATGAATTTGATTTCATACTTGAGGTCATGCTGCCGTTGCTTTTGTATCTTCATATGTTATTGGAGGACGCAGGGCAGATATTAGTTGCACAGAGATGTTTGGACGTACCTTCAGAATGGTCTGAGCAAAGATCTGATCTTCACTATTTCTTCAGGGCCAAGAAAGTGAGCAAAACAACACAAAAAGTAGCAGCCGGTGTCCTCTCTGGGGTTTTGAAAGTTTCTGGATACTTCACAGGTGCGGTGGTGAATTCCAAAGTGGGAAAGAAATTCTTTCGTCTTCTGCCTGGGGAAATTTTGCTTGCTGGGCTGGATGGATTTTGTAAGGTCTGTGATGCTGTTGAACTAGCCGGAAAAAATGTCATGTCAGCATCATCTACTGTTACAACTGAGCTTGTCTCTCACAAATATGGTGAAGCAGCAGGTAAGGCAGCAGGCGAAGGGCTTGATGCAGCAGGACATGCCATTGGAACTGCATGGACTGTTTTCAAGATCCGAAAGGCAATGAACCCGAAAAGTGCTTTCAAATCCACCACCCTAGCCAGATCTGCTGCCAAGGCAAAAGCTGATGAGGTAAGGGCAAAGAATAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006970 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009414 GO:0009415 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009642 GO:0009644 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0016020 GO:0030054 GO:0033993 GO:0042221 GO:0043207 GO:0044464 GO:0048511 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Senescence

Protein Analysis

508

Amino Acids

56.18

Weight (kDa)

9.06

Isoelectric Point (pI)

32.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Senescence	PF06911	227 - 286	1.8e-11	Senescence domain
Senescence	PF06911	363 - 497	3e-28	Senescence domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002216)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17840 AT2G17840 AT3G51250 AT3G51250 AT4G35985 AT4G35985 AT4G35985
fragaria_vesca	FvH4_1g11540 FvH4_1g11540 FvH4_1g11540 FvH4_1g11540 FvH4_2g01340 FvH4_2g01340 FvH4_2g01340
malus_domestica	MD02G1128400.v1.1 MD10G1123700.v1.1 MD15G1243600.v1.1
prunus_persica	Prupe.7G170600_v2.0.a1 Prupe.8G164100_v2.0.a1
pyrus_communis	pycom10g10590 pycom15g21450
rosa_chinensis	RchiOBHm_Chr2g0099181 RchiOBHm_Chr6g0252261
rosa_laevigata	RLG00000015400 RLG00000016853
rosa_multiflora	Rmu_co7982236.1_g000001 Rmu_sc0006252.1_g000017 Rmu_sc0006878.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143380 Rroxscaffold_7G00216200
rosa_rugosa	Rorug02G0077500 Rorug05G0506500 Rorug05G0506600
rosa_samantha	Rh2AG126400 Rh2BG129600 Rh2CG130600 Rh2DG131000 Rh6AG020300 Rh6BG015900 Rh6CG013100 Rh6DG014400
rosa_wichuraiana	Rw2G009750 Rw6G001670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	430
AatII	GACGTC	1 cut(s)	189
Acc36I	ACCTGC	2 cut(s)	45, 1346
AccB1I	GGYRCC	2 cut(s)	56, 322
AccI	GTMKAC	1 cut(s)	314
AccII	CGCG	3 cut(s)	101, 293, 336
AciI	CCGC	9 cut(s)	48, 69, 147, 166, 230, 334, 575, 916, 1175
AclWI	GGATC	6 cut(s)	85, 190, 214, 309, 836, 1420
AcoI	YGGCCR	1 cut(s)	227
AcsI	RAATTY	4 cut(s)	938, 1183, 1202, 1227
AcuI	CTGAAG	2 cut(s)	1029, 1069
AcyI	GRCGYC	4 cut(s)	57, 186, 317, 323
AfaI	GTAC	2 cut(s)	290, 1041
AfeI	AGCGCT	1 cut(s)	619
AfiI	CCNNNNNNNGG	4 cut(s)	559, 696, 825, 1141
AgsI	TTSAA	9 cut(s)	238, 412, 478, 751, 796, 1150, 1277, 1423, 1459
AjnI	CCWGG	2 cut(s)	552, 1219
AluBI	AGCT	5 cut(s)	139, 259, 703, 1327, 1499
AluI	AGCT	5 cut(s)	139, 259, 703, 1327, 1499
Alw21I	GWGCWC	1 cut(s)	141
Alw26I	GTCTC	1 cut(s)	1336
AlwI	GGATC	6 cut(s)	85, 190, 214, 309, 836, 1420
Aor51HI	AGCGCT	1 cut(s)	619
AoxI	GGCC	3 cut(s)	29, 227, 1089
ApoI	RAATTY	4 cut(s)	938, 1183, 1202, 1227
ArsI	GACNNNNNNTTYG	2 cut(s)	237, 269
AspLEI	GCGC	6 cut(s)	59, 101, 295, 325, 571, 620
AspS9I	GGNCC	3 cut(s)	30, 630, 1089
AsuC2I	CCSGG	3 cut(s)	96, 691, 789
AsuHPI	GGTGA	3 cut(s)	466, 1192, 1358
AvaII	GGWCC	1 cut(s)	630
BaeGI	GKGCMC	1 cut(s)	11
BanI	GGYRCC	2 cut(s)	56, 322
BanII	GRGCYC	1 cut(s)	141
BbsI	GAAGAC	1 cut(s)	1205
Bbv12I	GWGCWC	1 cut(s)	141
BccI	CCATC	2 cut(s)	775, 1241
BceAI	ACGGC	2 cut(s)	35, 952
BcgI	CGANNNNNNTGC	2 cut(s)	173, 207
BciT130I	CCWGG	2 cut(s)	554, 1221
BciVI	GTATCC	1 cut(s)	1154
BclI	TGATCA	1 cut(s)	705
BcnI	CCSGG	3 cut(s)	96, 691, 789
BcoDI	GTCTC	1 cut(s)	1336
BfaI	CTAG	2 cut(s)	1280, 1472
BfmI	CTRYAG	1 cut(s)	127
BfoI	RGCGCY	3 cut(s)	60, 326, 621
BfuAI	ACCTGC	2 cut(s)	45, 1346
BfuI	GTATCC	1 cut(s)	1154
BglII	AGATCT	2 cut(s)	1064, 1478
Bme1390I	CCNGG	5 cut(s)	96, 554, 691, 789, 1221
Bme18I	GGWCC	1 cut(s)	630
BmgT120I	GGNCC	3 cut(s)	30, 630, 1089
BmiI	GGNNCC	4 cut(s)	58, 324, 642, 786
BmrFI	CCNGG	5 cut(s)	96, 554, 691, 789, 1221
BmsI	GCATC	3 cut(s)	1258, 1313, 1372
BpiI	GAAGAC	1 cut(s)	1205
BplI	GAGNNNNNCTC	2 cut(s)	1316, 1348
BpuEI	CTTGAG	1 cut(s)	974
BpuMI	CCSGG	3 cut(s)	96, 691, 789
BsaHI	GRCGYC	4 cut(s)	57, 186, 317, 323
BsaJI	CCNNGG	6 cut(s)	72, 94, 175, 552, 1220, 1488
BsaXI	ACNNNNNCTCC	2 cut(s)	625, 655
Bsc4I	CCNNNNNNNGG	4 cut(s)	559, 696, 825, 1141
Bse118I	RCCGGY	3 cut(s)	319, 571, 1127
Bse1I	ACTGG	1 cut(s)	223
Bse3DI	GCAATG	1 cut(s)	1443
BseBI	CCWGG	2 cut(s)	554, 1221
BseDI	CCNNGG	6 cut(s)	72, 94, 175, 552, 1220, 1488
BseGI	GGATG	5 cut(s)	346, 382, 472, 786, 1252
BseLI	CCNNNNNNNGG	4 cut(s)	559, 696, 825, 1141
BseMI	GCAATG	1 cut(s)	1443
BseMII	CTCAG	2 cut(s)	1047, 1314
BseNI	ACTGG	1 cut(s)	223
BseRI	GAGGAG	2 cut(s)	89, 838
BseSI	GKGCMC	1 cut(s)	11
BseYI	CCCAGC	1 cut(s)	1238
BsgI	GTGCAG	1 cut(s)	521
Bsh1236I	CGCG	3 cut(s)	101, 293, 336
Bsh1285I	CGRYCG	2 cut(s)	105, 162
BshFI	GGCC	3 cut(s)	31, 229, 1091
BshNI	GGYRCC	2 cut(s)	56, 322
BsiEI	CGRYCG	2 cut(s)	105, 162
BsiHKAI	GWGCWC	1 cut(s)	141
BsiSI	CCGG	9 cut(s)	96, 296, 320, 326, 572, 690, 788, 1128, 1284
BslFI	GGGAC	4 cut(s)	316, 577, 706, 795
BslI	CCNNNNNNNGG	4 cut(s)	559, 696, 825, 1141
BsmAI	GTCTC	1 cut(s)	1336
BsmFI	GGGAC	4 cut(s)	316, 577, 706, 795
BsnI	GGCC	3 cut(s)	31, 229, 1091
Bsp1286I	GDGCHC	2 cut(s)	11, 141
BspACI	CCGC	9 cut(s)	48, 69, 147, 166, 230, 334, 575, 916, 1175
BspANI	GGCC	3 cut(s)	31, 229, 1091
BspCNI	CTCAG	2 cut(s)	1048, 1315
BspFNI	CGCG	3 cut(s)	101, 293, 336
BspHI	TCATGA	1 cut(s)	304
BspLI	GGNNCC	4 cut(s)	58, 324, 642, 786
BspMI	ACCTGC	2 cut(s)	45, 1346
BspPI	GGATC	6 cut(s)	85, 190, 214, 309, 836, 1420
BspT107I	GGYRCC	2 cut(s)	56, 322
BsrDI	GCAATG	1 cut(s)	1443
BsrFI	RCCGGY	3 cut(s)	319, 571, 1127
BsrI	ACTGG	1 cut(s)	223
BssAI	RCCGGY	3 cut(s)	319, 571, 1127
BssECI	CCNNGG	6 cut(s)	72, 94, 175, 552, 1220, 1488
BssNI	GRCGYC	4 cut(s)	57, 186, 317, 323
BssT1I	CCWWGG	2 cut(s)	175, 1488
Bst2UI	CCWGG	2 cut(s)	554, 1221
Bst4CI	ACNGT	3 cut(s)	739, 1315, 1417
Bst6I	CTCTTC	2 cut(s)	473, 770
BstACI	GRCGYC	4 cut(s)	57, 186, 317, 323
BstAPI	GCANNNNNTGC	1 cut(s)	1394
BstC8I	GCNNGC	6 cut(s)	141, 145, 321, 573, 1236, 1369
BstDEI	CTNAG	4 cut(s)	390, 675, 1056, 1323
BstF5I	GGATG	5 cut(s)	346, 382, 472, 786, 1252
BstFNI	CGCG	3 cut(s)	101, 293, 336
BstH2I	RGCGCY	3 cut(s)	60, 326, 621
BstHHI	GCGC	6 cut(s)	59, 101, 295, 325, 571, 620
BstMAI	GTCTC	1 cut(s)	1336
BstMCI	CGRYCG	2 cut(s)	105, 162
BstNI	CCWGG	2 cut(s)	554, 1221
BstNSI	RCATGY	1 cut(s)	1397
BstSCI	CCNGG	5 cut(s)	94, 552, 689, 787, 1219
BstSFI	CTRYAG	1 cut(s)	127
BstSLI	GKGCMC	1 cut(s)	11
BstUI	CGCG	3 cut(s)	101, 293, 336
BstV2I	GAAGAC	1 cut(s)	1205
BstX2I	RGATCY	5 cut(s)	90, 219, 1064, 1425, 1478
BstYI	RGATCY	5 cut(s)	90, 219, 1064, 1425, 1478
BsuI	GTATCC	1 cut(s)	1154
BsuRI	GGCC	3 cut(s)	31, 229, 1091
BtsCI	GGATG	5 cut(s)	346, 382, 472, 786, 1252
BtsIMutI	CAGTG	1 cut(s)	230
BveI	ACCTGC	2 cut(s)	45, 1346
Cac8I	GCNNGC	6 cut(s)	141, 145, 321, 573, 1236, 1369
CciI	TCATGA	1 cut(s)	304
CfoI	GCGC	6 cut(s)	59, 101, 295, 325, 571, 620
Cfr10I	RCCGGY	3 cut(s)	319, 571, 1127
Cfr13I	GGNCC	3 cut(s)	30, 630, 1089
CseI	GACGC	4 cut(s)	121, 325, 420, 1010
Csp6I	GTAC	2 cut(s)	289, 1040
CviAII	CATG	6 cut(s)	305, 820, 961, 1297, 1394, 1410
CviQI	GTAC	2 cut(s)	289, 1040
DdeI	CTNAG	4 cut(s)	390, 675, 1056, 1323
DinI	GGCGCC	2 cut(s)	58, 324
DrdI	GACNNNNNNGTC	1 cut(s)	430
DseDI	GACNNNNNNGTC	1 cut(s)	430
EaeI	YGGCCR	1 cut(s)	227
Eam1104I	CTCTTC	2 cut(s)	473, 770
EarI	CTCTTC	2 cut(s)	473, 770
EciI	GGCGGA	1 cut(s)	590
Ecl136II	GAGCTC	1 cut(s)	139
Eco130I	CCWWGG	2 cut(s)	175, 1488
Eco24I	GRGCYC	1 cut(s)	141
Eco47I	GGWCC	1 cut(s)	630
Eco47III	AGCGCT	1 cut(s)	619
Eco53kI	GAGCTC	1 cut(s)	139
Eco57I	CTGAAG	2 cut(s)	1029, 1069
EcoICRI	GAGCTC	1 cut(s)	139
EcoRI	GAATTC	1 cut(s)	1183
EcoRII	CCWGG	2 cut(s)	552, 1219
EcoT14I	CCWWGG	2 cut(s)	175, 1488
EcoT38I	GRGCYC	1 cut(s)	141
EgeI	GGCGCC	2 cut(s)	58, 324
EheI	GGCGCC	2 cut(s)	58, 324
ErhI	CCWWGG	2 cut(s)	175, 1488
FaeI	CATG	6 cut(s)	308, 823, 964, 1300, 1397, 1413
FalI	AAGNNNNNCTT	2 cut(s)	1190, 1222
FaqI	GGGAC	4 cut(s)	316, 577, 706, 795
FatI	CATG	6 cut(s)	304, 819, 960, 1296, 1393, 1409
FauI	CCCGC	1 cut(s)	341
FauNDI	CATATG	1 cut(s)	987
FbaI	TGATCA	1 cut(s)	705
FblI	GTMKAC	1 cut(s)	314
FokI	GGATG	5 cut(s)	353, 389, 479, 793, 1259
FriOI	GRGCYC	1 cut(s)	141
FspBI	CTAG	2 cut(s)	1280, 1472
GlaI	GCGC	6 cut(s)	58, 100, 294, 324, 570, 619
GsaI	CCCAGC	1 cut(s)	1242
HaeII	RGCGCY	3 cut(s)	60, 326, 621
HaeIII	GGCC	3 cut(s)	31, 229, 1091
HapII	CCGG	9 cut(s)	96, 296, 320, 326, 572, 690, 788, 1128, 1284
HgaI	GACGC	4 cut(s)	121, 325, 420, 1010
HhaI	GCGC	6 cut(s)	59, 101, 295, 325, 571, 620
Hin1I	GRCGYC	4 cut(s)	57, 186, 317, 323
Hin1II	CATG	6 cut(s)	308, 823, 964, 1300, 1397, 1413
Hin6I	GCGC	6 cut(s)	57, 99, 293, 323, 569, 618
HinP1I	GCGC	6 cut(s)	57, 99, 293, 323, 569, 618
HincII	GTYRAC	2 cut(s)	109, 315
HindII	GTYRAC	2 cut(s)	109, 315
HinfI	GANTC	4 cut(s)	266, 308, 329, 890
HpaI	GTTAAC	1 cut(s)	109
HpaII	CCGG	9 cut(s)	96, 296, 320, 326, 572, 690, 788, 1128, 1284
HphI	GGTGA	3 cut(s)	466, 1192, 1358
Hpy166II	GTNNAC	2 cut(s)	109, 315
Hpy188I	TCNGA	6 cut(s)	514, 589, 1048, 1057, 1069, 1430
Hpy188III	TCNNGA	5 cut(s)	157, 305, 409, 1158, 1423
Hpy8I	GTNNAC	2 cut(s)	109, 315
HpyCH4III	ACNGT	3 cut(s)	739, 1315, 1417
HpyCH4IV	ACGT	2 cut(s)	186, 1038
HpyCH4V	TGCA	5 cut(s)	502, 686, 1022, 1385, 1409
HpyF3I	CTNAG	4 cut(s)	390, 675, 1056, 1323
HpySE526I	ACGT	2 cut(s)	186, 1038
Hsp92I	GRCGYC	4 cut(s)	57, 186, 317, 323
Hsp92II	CATG	6 cut(s)	308, 823, 964, 1300, 1397, 1413
HspAI	GCGC	6 cut(s)	57, 99, 293, 323, 569, 618
KasI	GGCGCC	2 cut(s)	56, 322
KroI	GCCGGC	2 cut(s)	319, 571
KroNI	GCCGGC	2 cut(s)	321, 573
Ksp22I	TGATCA	1 cut(s)	705
KspAI	GTTAAC	1 cut(s)	109
LmnI	GCTCC	3 cut(s)	610, 646, 784
LweI	GCATC	3 cut(s)	1258, 1313, 1372
MaeI	CTAG	2 cut(s)	1280, 1472
MaeII	ACGT	2 cut(s)	186, 1038
MaeIII	GTNAC	3 cut(s)	482, 733, 1315
MflI	RGATCY	5 cut(s)	90, 219, 1064, 1425, 1478
MhlI	GDGCHC	2 cut(s)	11, 141
MluCI	AATT	8 cut(s)	114, 403, 449, 461, 938, 1183, 1202, 1227
Mly113I	GGCGCC	2 cut(s)	57, 323
MlyI	GAGTC	2 cut(s)	317, 338
MreI	CGCCGGCG	2 cut(s)	319, 571
MroNI	GCCGGC	2 cut(s)	319, 571
MseI	TTAA	2 cut(s)	87, 108
MslI	CAYNNNNRTG	2 cut(s)	1027, 1341
MspA1I	CMGCKG	3 cut(s)	147, 232, 703
MspI	CCGG	9 cut(s)	96, 296, 320, 326, 572, 690, 788, 1128, 1284
MspR9I	CCNGG	5 cut(s)	96, 554, 691, 789, 1221
MvaI	CCWGG	2 cut(s)	554, 1221
MvnI	CGCG	3 cut(s)	101, 293, 336
NaeI	GCCGGC	2 cut(s)	321, 573
NarI	GGCGCC	2 cut(s)	57, 323
NciI	CCSGG	3 cut(s)	96, 691, 789
NdeI	CATATG	1 cut(s)	987
NgoMIV	GCCGGC	2 cut(s)	319, 571
NlaIII	CATG	6 cut(s)	308, 823, 964, 1300, 1397, 1413
NlaIV	GGNNCC	4 cut(s)	58, 324, 642, 786
NmeAIII	GCCGAG	1 cut(s)	97
NmuCI	GTSAC	1 cut(s)	733
NspI	RCATGY	1 cut(s)	1397
PagI	TCATGA	1 cut(s)	304
PcsI	WCGNNNNNNNCGW	6 cut(s)	60, 147, 168, 177, 431, 518
PdiI	GCCGGC	2 cut(s)	321, 573
PfeI	GAWTC	2 cut(s)	266, 890
PflFI	GACNNNGTC	1 cut(s)	185
Ple19I	CGATCG	2 cut(s)	105, 162
PleI	GAGTC	2 cut(s)	316, 337
PluTI	GGCGCC	2 cut(s)	60, 326
PpsI	GAGTC	2 cut(s)	316, 337
Psp124BI	GAGCTC	1 cut(s)	141
Psp6I	CCWGG	2 cut(s)	552, 1219
PspFI	CCCAGC	1 cut(s)	1238
PspGI	CCWGG	2 cut(s)	552, 1219
PspN4I	GGNNCC	4 cut(s)	58, 324, 642, 786
PspPI	GGNCC	3 cut(s)	30, 630, 1089
PsuI	RGATCY	5 cut(s)	90, 219, 1064, 1425, 1478
PsyI	GACNNNGTC	1 cut(s)	185
PvuI	CGATCG	2 cut(s)	105, 162
PvuII	CAGCTG	1 cut(s)	703
RsaI	GTAC	2 cut(s)	290, 1041
RsaNI	GTAC	2 cut(s)	289, 1040
RseI	CAYNNNNRTG	2 cut(s)	1027, 1341
SacI	GAGCTC	1 cut(s)	141
SalI	GTCGAC	1 cut(s)	313
SaqAI	TTAA	2 cut(s)	87, 108
Sau96I	GGNCC	3 cut(s)	30, 630, 1089
SchI	GAGTC	2 cut(s)	317, 338
ScrFI	CCNGG	5 cut(s)	96, 554, 691, 789, 1221
SduI	GDGCHC	2 cut(s)	11, 141
SfaNI	GCATC	3 cut(s)	1258, 1313, 1372
SfcI	CTRYAG	1 cut(s)	127
SfoI	GGCGCC	2 cut(s)	58, 324
SgrAI	CRCCGGYG	2 cut(s)	319, 571
SgrDI	CGTCGACG	1 cut(s)	313
SinI	GGWCC	1 cut(s)	630
SmiMI	CAYNNNNRTG	2 cut(s)	1027, 1341
SmlI	CTYRAG	1 cut(s)	953
SmoI	CTYRAG	1 cut(s)	953
Sse9I	AATT	8 cut(s)	114, 403, 449, 461, 938, 1183, 1202, 1227
SsiI	CCGC	9 cut(s)	48, 69, 147, 166, 230, 334, 575, 916, 1175
SspDI	GGCGCC	2 cut(s)	56, 322
SspMI	CTAG	2 cut(s)	1280, 1472
SstI	GAGCTC	1 cut(s)	141
StyD4I	CCNGG	5 cut(s)	94, 552, 689, 787, 1219
StyI	CCWWGG	2 cut(s)	175, 1488
TaaI	ACNGT	3 cut(s)	739, 1315, 1417
TaiI	ACGT	2 cut(s)	189, 1041
TaqI	TCGA	5 cut(s)	135, 158, 261, 314, 434
TasI	AATT	8 cut(s)	114, 403, 449, 461, 938, 1183, 1202, 1227
TauI	GCSGC	4 cut(s)	71, 150, 169, 232
TfiI	GAWTC	2 cut(s)	266, 890
Tru1I	TTAA	2 cut(s)	87, 108
Tru9I	TTAA	2 cut(s)	87, 108
TscAI	CASTG	1 cut(s)	230
TseFI	GTSAC	1 cut(s)	733
Tsp45I	GTSAC	1 cut(s)	733
TspDTI	ATGAA	6 cut(s)	620, 785, 937, 951, 974, 1454
TspGWI	ACGGA	1 cut(s)	432
TspRI	CASTG	1 cut(s)	230
Tth111I	GACNNNGTC	1 cut(s)	185
VpaK11BI	GGWCC	1 cut(s)	630
XapI	RAATTY	4 cut(s)	938, 1183, 1202, 1227
XceI	RCATGY	1 cut(s)	1397
XmiI	GTMKAC	1 cut(s)	314
XspI	CTAG	2 cut(s)	1280, 1472
ZraI	GACGTC	1 cut(s)	187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.