MD16G1231200.v1.1

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
23695435 .. 23695704
270 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1231200.v1.1.491

Sequence Viewer

Length: 270 bp
ATGCTATGTTTTCCATGCTTGACTGACCAGCAAACCAACTGTTATTGTATTTGTAATAAATGGGGTATCGGCATGGAGATAAGTAATGGTGCCAAGAGAGATGAAGTAGAGAAGCTTGTTATAGAATTAATGGAAGGAGAGAAAGGCAAGCAACTGAAAATTAAGGGCATGGAGTGGAAGAAACTGGCGGAAGAAGCCACTACTCCACATGGTTCATCATCCACAAACTTGGACAATTTTGTGAATCAAGTGCTTCGAAGAAAAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

10.1

Weight (kDa)

7.6

Isoelectric Point (pI)

25.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 89
AciI CCGC 1 cut(s) 188
AluBI AGCT 2 cut(s) 115, 267
AluI AGCT 2 cut(s) 115, 267
AseI ATTAAT 1 cut(s) 128
AsuII TTCGAA 1 cut(s) 256
BanI GGYRCC 1 cut(s) 89
BmiI GGNNCC 1 cut(s) 91
Bpu14I TTCGAA 1 cut(s) 256
Bse1I ACTGG 1 cut(s) 189
BseGI GGATG 1 cut(s) 218
BseNI ACTGG 1 cut(s) 189
BshNI GGYRCC 1 cut(s) 89
Bsp119I TTCGAA 1 cut(s) 256
BspACI CCGC 1 cut(s) 188
BspLI GGNNCC 1 cut(s) 91
BspT104I TTCGAA 1 cut(s) 256
BspT107I GGYRCC 1 cut(s) 89
BsrI ACTGG 1 cut(s) 189
Bst4CI ACNGT 1 cut(s) 41
BstBI TTCGAA 1 cut(s) 256
BstC8I GCNNGC 1 cut(s) 149
BstF5I GGATG 1 cut(s) 218
BstMWI GCNNNNNNNGC 1 cut(s) 194
BstXI CCANNNNNNTGG 1 cut(s) 229
BtsCI GGATG 1 cut(s) 218
Cac8I GCNNGC 1 cut(s) 149
CviAII CATG 4 cut(s) 15, 73, 169, 209
CviJI RGCY 3 cut(s) 115, 197, 267
CviKI_1 RGCY 3 cut(s) 115, 197, 267
EciI GGCGGA 1 cut(s) 203
FaeI CATG 4 cut(s) 18, 76, 172, 212
FaiI YATR 6 cut(s) 7, 16, 74, 122, 170, 210
FatI CATG 4 cut(s) 14, 72, 168, 208
FokI GGATG 1 cut(s) 205
Hin1II CATG 4 cut(s) 18, 76, 172, 212
HindIII AAGCTT 1 cut(s) 113
HinfI GANTC 1 cut(s) 244
HpyAV CCTTC 1 cut(s) 128
HpyCH4III ACNGT 1 cut(s) 41
HpyF10VI GCNNNNNNNGC 1 cut(s) 194
Hsp92II CATG 4 cut(s) 18, 76, 172, 212
LpnPI CCDG 2 cut(s) 41, 170
MboII GAAGA 3 cut(s) 190, 203, 270
MluCI AATT 3 cut(s) 125, 159, 235
MseI TTAA 2 cut(s) 128, 162
MwoI GCNNNNNNNGC 1 cut(s) 194
NlaIII CATG 4 cut(s) 18, 76, 172, 212
NlaIV GGNNCC 1 cut(s) 91
NspV TTCGAA 1 cut(s) 256
PfeI GAWTC 1 cut(s) 244
PshBI ATTAAT 1 cut(s) 128
PspN4I GGNNCC 1 cut(s) 91
SaqAI TTAA 2 cut(s) 128, 162
SetI ASST 2 cut(s) 117, 269
SfuI TTCGAA 1 cut(s) 256
Sse9I AATT 3 cut(s) 125, 159, 235
SsiI CCGC 1 cut(s) 188
TaaI ACNGT 1 cut(s) 41
TaqI TCGA 1 cut(s) 256
TasI AATT 3 cut(s) 125, 159, 235
TfiI GAWTC 1 cut(s) 244
Tru1I TTAA 2 cut(s) 128, 162
Tru9I TTAA 2 cut(s) 128, 162
TspDTI ATGAA 2 cut(s) 117, 204
VspI ATTAAT 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.