Rroxscaffold_3G00221760

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
4658867 .. 4659930
1064 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_3G00221760.1

Sequence Viewer

Length: 255 bp
ATGGAGATAGAGGGTAATGTTCGAAGAAATTACATCGAGGATCTTGTGAGGAAATTAATGAAGGGAGAGGAAGGCAAAGAGATGAGGAAGAAAGCCATGGAATGGAAGAAGTTGGCGGAGGAGGCCACTACTGCTCCCAATGGTTCATCTTTCTTGAATTTGGGCAAGTTGGATCAAACCACTGGGATGGATTCGGGGATTTCTTCAAAACCTGGATCAAAAGACCTACATATTGCTCTAGGGGTCATCATTTAG

Protein Analysis

84

Amino Acids

9.29

Weight (kDa)

7.99

Isoelectric Point (pI)

40.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 102
AciI CCGC 1 cut(s) 116
AclWI GGATC 3 cut(s) 48, 180, 223
AcsI RAATTY 1 cut(s) 157
AfiI CCNNNNNNNGG 1 cut(s) 102
AgsI TTSAA 2 cut(s) 157, 207
AjnI CCWGG 1 cut(s) 211
AlwI GGATC 3 cut(s) 48, 180, 223
AoxI GGCC 1 cut(s) 123
ApoI RAATTY 1 cut(s) 157
AseI ATTAAT 1 cut(s) 56
AsuII TTCGAA 1 cut(s) 22
BccI CCATC 1 cut(s) 181
BciT130I CCWGG 1 cut(s) 213
BfaI CTAG 1 cut(s) 239
Bme1390I CCNGG 1 cut(s) 213
BmrFI CCNGG 1 cut(s) 213
BmrI ACTGGG 1 cut(s) 192
BmuI ACTGGG 1 cut(s) 192
Bpu14I TTCGAA 1 cut(s) 22
BsaJI CCNNGG 1 cut(s) 96
BsaXI ACNNNNNCTCC 2 cut(s) 118, 148
Bsc4I CCNNNNNNNGG 1 cut(s) 102
Bse1I ACTGG 1 cut(s) 187
BseBI CCWGG 1 cut(s) 213
BseDI CCNNGG 1 cut(s) 96
BseGI GGATG 1 cut(s) 192
BseLI CCNNNNNNNGG 1 cut(s) 102
BseNI ACTGG 1 cut(s) 187
BseRI GAGGAG 1 cut(s) 134
BshFI GGCC 1 cut(s) 125
BslI CCNNNNNNNGG 1 cut(s) 102
BsnI GGCC 1 cut(s) 125
Bsp119I TTCGAA 1 cut(s) 22
Bsp143I GATC 3 cut(s) 40, 172, 215
Bsp19I CCATGG 1 cut(s) 96
BspACI CCGC 1 cut(s) 116
BspANI GGCC 1 cut(s) 125
BspPI GGATC 3 cut(s) 48, 180, 223
BspT104I TTCGAA 1 cut(s) 22
BsrI ACTGG 1 cut(s) 187
BssECI CCNNGG 1 cut(s) 96
BssMI GATC 3 cut(s) 40, 172, 215
BssT1I CCWWGG 1 cut(s) 96
Bst2UI CCWGG 1 cut(s) 213
BstBI TTCGAA 1 cut(s) 22
BstDSI CCRYGG 1 cut(s) 96
BstF5I GGATG 1 cut(s) 192
BstKTI GATC 3 cut(s) 43, 175, 218
BstMBI GATC 3 cut(s) 40, 172, 215
BstMWI GCNNNNNNNGC 2 cut(s) 122, 131
BstNI CCWGG 1 cut(s) 213
BstSCI CCNGG 1 cut(s) 211
BstX2I RGATCY 1 cut(s) 40
BstXI CCANNNNNNTGG 1 cut(s) 187
BstYI RGATCY 1 cut(s) 40
BsuRI GGCC 1 cut(s) 125
BtgI CCRYGG 1 cut(s) 96
BtsCI GGATG 1 cut(s) 192
BtsIMutI CAGTG 1 cut(s) 180
CviAII CATG 1 cut(s) 97
CviJI RGCY 2 cut(s) 95, 125
CviKI_1 RGCY 2 cut(s) 95, 125
DpnI GATC 3 cut(s) 42, 174, 217
DpnII GATC 3 cut(s) 40, 172, 215
EciI GGCGGA 1 cut(s) 131
Eco130I CCWWGG 1 cut(s) 96
EcoRII CCWGG 1 cut(s) 211
EcoT14I CCWWGG 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 96
FaeI CATG 1 cut(s) 100
FaiI YATR 2 cut(s) 98, 231
FatI CATG 1 cut(s) 96
FokI GGATG 1 cut(s) 199
FspBI CTAG 1 cut(s) 239
HaeIII GGCC 1 cut(s) 125
Hin1II CATG 1 cut(s) 100
HinfI GANTC 1 cut(s) 191
Hpy188III TCNNGA 1 cut(s) 154
HpyAV CCTTC 2 cut(s) 55, 65
HpyF10VI GCNNNNNNNGC 2 cut(s) 122, 131
Hsp92II CATG 1 cut(s) 100
Kzo9I GATC 3 cut(s) 40, 172, 215
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 3 cut(s) 168, 198, 225
MaeI CTAG 1 cut(s) 239
MalI GATC 3 cut(s) 42, 174, 217
MboI GATC 3 cut(s) 40, 172, 215
MboII GAAGA 4 cut(s) 36, 100, 118, 195
MflI RGATCY 1 cut(s) 40
MluCI AATT 3 cut(s) 28, 53, 157
MmeI TCCRAC 1 cut(s) 150
MnlI CCTC 7 cut(s) 4, 31, 42, 61, 78, 112, 115
MseI TTAA 1 cut(s) 56
MslI CAYNNNNRTG 1 cut(s) 185
MspR9I CCNGG 1 cut(s) 213
MvaI CCWGG 1 cut(s) 213
MwoI GCNNNNNNNGC 2 cut(s) 122, 131
NcoI CCATGG 1 cut(s) 96
NdeII GATC 3 cut(s) 40, 172, 215
NlaIII CATG 1 cut(s) 100
NspV TTCGAA 1 cut(s) 22
PfeI GAWTC 1 cut(s) 191
PflMI CCANNNNNTGG 1 cut(s) 102
PshBI ATTAAT 1 cut(s) 56
Psp6I CCWGG 1 cut(s) 211
PspGI CCWGG 1 cut(s) 211
PsuI RGATCY 1 cut(s) 40
RseI CAYNNNNRTG 1 cut(s) 185
SaqAI TTAA 1 cut(s) 56
Sau3AI GATC 3 cut(s) 40, 172, 215
ScrFI CCNGG 1 cut(s) 213
SetI ASST 2 cut(s) 214, 228
SfuI TTCGAA 1 cut(s) 22
SmiMI CAYNNNNRTG 1 cut(s) 185
Sse9I AATT 3 cut(s) 28, 53, 157
SsiI CCGC 1 cut(s) 116
SspMI CTAG 1 cut(s) 239
StyD4I CCNGG 1 cut(s) 211
StyI CCWWGG 1 cut(s) 96
TaqI TCGA 2 cut(s) 22, 36
TasI AATT 3 cut(s) 28, 53, 157
TfiI GAWTC 1 cut(s) 191
Tru1I TTAA 1 cut(s) 56
Tru9I TTAA 1 cut(s) 56
TscAI CASTG 1 cut(s) 187
TspDTI ATGAA 2 cut(s) 74, 135
TspRI CASTG 1 cut(s) 187
Van91I CCANNNNNTGG 1 cut(s) 102
VspI ATTAAT 1 cut(s) 56
XapI RAATTY 1 cut(s) 157
XspI CTAG 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.