Rorug07G0320700

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0007481
Physical Location & Seq
Forward (+)
32910201 .. 32917362
7162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0320700.1

Sequence Viewer

Length: 2976 bp
ATGGGAACCCTGAAGAGAAAATCGGAGGAAGATGACTCTGCAGCAGCTCCACCCAAAGTAGCCAAGTCGGAGAACAAGAACACTCTTGAAATCGTCAACAATGAACAGATGGTCTGCGTGCACGACGTGTCGTACCCTGAGGGTTATGTTCCTCCGCCGCCGCCGCCGCCTTCTTCTTCCGAACCCGCCAAGAAATTCCCCTTCACTCTCGACCCTTTTCAGTCCGAAGCCATCAAATGCATTGAAAATGGCGAGTCCGTCATGGTGTCTGCTCACACATCTGCTGGAAAAACCGTTGTTGCGTCGTACGCGATTGCGTTGTGTTTGCGTAACAAGCAACGTGTGATATACACCGCACCCATCAAAGCTCTCAGCAACCAAAAGTACAGAGAGTTCAAAGAGGAGTTTTCGGATGTTGGGTTGATGACTGGAGATGTAACAATCGACCCCAACGCCTCGTGCTTGGTGATGACCACGGAAATCTGGCGGAGCATGCAGTACAAAGGATCAGAGGTGACGCGAGAGGTGGCTTGGATAATCTTTGATGAGGTGCATTACATGCGGGATCTCGAGAGAGGTGTGGTGTGGGAAGAGAGCATTGTTATGGCTCCAAAGAATGCTCGCTTTGTCTTCCTCTCAGCAACTGTGCCCAATGCCAAGGAATTTGCTGATTGGCTCGCAAAGGTTCATCGACAGCCTTGCCACATTGTCTATACGGATTATAGGCCCACTCCTCTTCAGCATTATATTTTCCCCTCCGGAGGGGATGGTCTGTACTTGGTAGTTGATGAAAAGGGAAAGTTTCGTGAGGACAGCTTTCAACAAGCTCTTAATGCACTTGCTCCTGCCTCCGACGCTGCTAAGAAGAAGGAAAATGGAAAGTGGCAGAAGGGTCTGGTCATCGGCAAGGCCGCTGAAGAAAGCGATATCTTCAAGATGGTGAAAATGATAATTCAGCGTCAGTATGACCCTGTCATACTTTTCAGCTTTAGCAAAAGGGAATGTGAATTACTTGCAATGCAGATGGCAAAGTTGGACCTAAATGGGGACAGTGAGAAAGCAAACATAGAAGCCATCTTCTGGAGTGCTATGGATATGCTTTCAGATGACGATAAGAAGTTACCCCAGGTTACCACTATGTTACCCCTTTTAATGCGTGGAATAGGTGTGCATCATTCTGGTTTGATTCCCATTCTAAAGGAAGTGATTGAGATATTATTTCAGGAAGGTCTTATCAAGTGTTTGTTTGCAACAGAGACCTTCAGCATAGGACTGAACATGCCTGCGAAAACTGTTGTATTTACCAATGTCCGGAAATTTGATGGTAATAAGTTCAGATGGATAACCAGTGGTGAGTATATACAAATGAGTGGTCGTGCTGGTCGCCGGGGTATTGATAAACGTGGGATATGCATACTTATGGTAGATGAGAAGCTAGAGCCATCTACTGCCAAAATGATGCTTAAAGGAAATGCTGATAGTTTGAACAGTGCCTTTCATTTAAGCTACAACATGCTTTTGAATCAATTGCGCTCTGAAGATGGTAATCCAGAAAATTTACTTCGTAACTCATTCTATCAGTTCCAAGCTGATCGTGCCATTCCCAATCTGGAGAAACAAGCAAAGGAGCTTGAGCAAGAGAGGGATTCAATTACAATTGAAGAAGAAGATAGTGTAAGGAATTATTACAATCTAGTACAGCAATACAAGAGTTTAAAGCAGGATCTTCGTGAGATTGTGATTTCTCCAAAGTACTGCTTACCATTTCTGAAACCTGGTAGGCTTGTGTCAATCCAATGCACCAAGAGTGATGAAGCTTCCGCTTCTTTTTCTACCGAGGACCATGTCACATGGGGTGTTATACTTAATTTTCAACGGGTGAAAACTGTTTCTGAAGACGATGCAGTTAAGAGACCTGAAGATTCAAACTACACAGTGGATGTTTTGACTAGGTGTCTGGTCGGCACAAATGGAGTTGCAAAAAAAACACTCAAAATTGTTCCTTTGAAAGAACTGGGAGAACCTGTTGTTGTTTCGATTTCCATCTCTCAGATTAATAGCATGAGTCGACTTTGTATGGTCATACCAAATGATCTTTTGTCATTACAAGCTCGAGAAAACACACTGAAGAAAGTTCTTGAAACTCTTTCAAGATTTGGAGAGAAGATTCCTCTTTTAGATCCTGAAGAAGACATGAAGATTCAAAGTAGTTCGTACAAAAAAGTGGCTCGTAGGATTGAGGCTTTAGAGAACCTGTTTGACAGGCATGAAATTGCAAAATCACCACTAATTGAGCAAAAGCTCAAGGTTTTTCACATGAAGCAGGAATTGGCAGCGAAGATCAAGTCAATTAAGAAAACAATGCGCTCTTCAACTGCGTTGGCTTTTAAAGATGAACTTAAGGCACGAAAACGGGTTCTTCGGAGGCTAGGATATGTTACTAGCGATGATGTTGTGCAGTTGAAGGGTAAGGTTGCTTGTGAAATCAGTAGTGCAGATGAGTTGACCCTCACAGAGCTCATGTTCAATGGCGTTTTCAAGGACATAAAGGTAGAAGAGATGGTATCTCTTCTCTCATGTTTTGTTTGGCGGGAAAAACTAAAAGATGCTACAAAACCAAGAGAAGAACTTGACCTGCTCTTCTTGCAATTACAAGAAACTGCTCGGAGGGTGGCTGAAGTTCAGCTTGAGTGCAAGGTTGAAATTGACATCGATAGCTTTGTGAATTCATTTCGGCCTGATATTATGGAGGCTGCATTTGCTTGGGCAAAAGGGTCAAAATTTTATGAGATAATGTCAGTTACAGGGGTTTTCGAGGGTAGCTTAATCAGGGCAATCAGGAGATTAGAGGAAGTTCTTCAGCAACTTATACACGCAGCCAATTCTATTGGAGAAACTGATCTTGAATCAAAATTTGAGGAGGCTGTTTCAAAAATCAAGAGAGACATTGTCTTTGCAGCTTCCCTATACTTGTAA

Protein Analysis

991

Amino Acids

112.19

Weight (kDa)

6.46

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 69 - 216 3.1e-09 Type III restriction enzyme, res subunit
DEAD PF00270 72 - 221 6.9e-27 DEAD/DEAH box helicase
DEXQc_Suv3 PF22527 93 - 203 2e-07 DEXQ-box helicase domain of Suv3
MTR4-like_stalk PF21408 518 - 580 3.7e-21 Exosome RNA helicase MTR4-like, stalk
MTR4_beta-barrel PF13234 582 - 789 5.4e-49 Mtr4-like, beta-barrel domain
DSHCT PF08148 816 - 986 4e-54 DSHCT (NUC185) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2643
AccB7I CCANNNNNTGG 1 cut(s) 1080
AccI GTMKAC 1 cut(s) 2068
AccII CGCG 2 cut(s) 311, 520
AccIII TCCGGA 2 cut(s) 758, 1311
AclWI GGATC 4 cut(s) 514, 573, 1731, 2174
AcsI RAATTY 7 cut(s) 194, 662, 1316, 1555, 2725, 2780, 2912
AdeI CACNNNGTG 1 cut(s) 127
AfaI GTAC 8 cut(s) 134, 308, 386, 500, 776, 1698, 1754, 2216
AfiI CCNNNNNNNGG 5 cut(s) 761, 762, 1045, 1080, 1311
AflII CTTAAG 1 cut(s) 2399
AflIII ACRYGT 2 cut(s) 126, 340
AhdI GACNNNNNGTC 1 cut(s) 1953
AjiI CACGTC 1 cut(s) 127
AjnI CCWGG 2 cut(s) 1125, 1774
AjuI GAANNNNNNNTTGG 2 cut(s) 2312, 2344
Alw21I GWGCWC 2 cut(s) 123, 2520
Alw26I GTCTC 3 cut(s) 1250, 1906, 2937
Alw44I GTGCAC 1 cut(s) 119
AlwI GGATC 4 cut(s) 514, 573, 1731, 2174
AlwNI CAGNNNCTG 1 cut(s) 644
Ama87I CYCGRG 2 cut(s) 569, 2112
Aor13HI TCCGGA 2 cut(s) 758, 1311
AoxI GGCC 3 cut(s) 725, 909, 2735
ApaLI GTGCAC 1 cut(s) 119
ApeKI GCWGC 7 cut(s) 41, 44, 857, 2333, 2753, 2876, 2957
ApoI RAATTY 7 cut(s) 194, 662, 1316, 1555, 2725, 2780, 2912
ArsI GACNNNNNNTTYG 6 cut(s) 1357, 1389, 2330, 2362, 2936, 2968
AseI ATTAAT 1 cut(s) 2055
Asp700I GAANNNNTTC 1 cut(s) 2856
AspLEI GCGC 2 cut(s) 1533, 2367
AspS9I GGNCC 3 cut(s) 726, 1036, 1840
AsuC2I CCSGG 1 cut(s) 1388
AsuHPI GGTGA 6 cut(s) 478, 526, 952, 1364, 1891, 2274
AvaI CYCGRG 2 cut(s) 569, 2112
AvaII GGWCC 2 cut(s) 1036, 1840
AxyI CCTNAGG 1 cut(s) 138
BaeGI GKGCMC 2 cut(s) 123, 651
BanII GRGCYC 1 cut(s) 2520
BauI CACGAG 1 cut(s) 457
BbsI GAAGAC 3 cut(s) 622, 1902, 2196
Bbv12I GWGCWC 2 cut(s) 123, 2520
BbvI GCAGC 7 cut(s) 53, 56, 844, 2345, 2740, 2888, 2969
BcgI CGANNNNNNTGC 4 cut(s) 681, 715, 1709, 1743
BciT130I CCWGG 2 cut(s) 1127, 1776
BcnI CCSGG 1 cut(s) 1388
BcoDI GTCTC 3 cut(s) 1250, 1906, 2937
BfaI CTAG 5 cut(s) 1436, 1694, 1950, 2429, 2442
BfmI CTRYAG 1 cut(s) 39
BfrI CTTAAG 1 cut(s) 2399
BfuAI ACCTGC 1 cut(s) 2643
BmcAI AGTACT 1 cut(s) 1754
Bme1390I CCNGG 3 cut(s) 1127, 1388, 1776
Bme18I GGWCC 2 cut(s) 1036, 1840
BmeRI GACNNNNNGTC 1 cut(s) 1953
BmeT110I CYCGRG 2 cut(s) 569, 2112
BmgBI CACGTC 1 cut(s) 127
BmgT120I GGNCC 3 cut(s) 726, 1036, 1840
BmiI GGNNCC 2 cut(s) 7, 609
BmrFI CCNGG 3 cut(s) 1127, 1388, 1776
BmrI ACTGGG 1 cut(s) 2024
BmsI GCATC 4 cut(s) 1180, 1449, 1891, 2596
BmuI ACTGGG 1 cut(s) 2024
BpiI GAAGAC 3 cut(s) 622, 1902, 2196
BpmI CTGGAG 3 cut(s) 450, 1102, 1631
BpuEI CTTGAG 3 cut(s) 1652, 2288, 2708
BpuMI CCSGG 1 cut(s) 1388
Bsa29I ATCGAT 1 cut(s) 2712
BsaBI GATNNNNATC 2 cut(s) 1545, 2042
BsaI GGTCTC 2 cut(s) 1250, 1906
BsaJI CCNNGG 5 cut(s) 474, 657, 1125, 1387, 1836
BsaWI WCCGGW 2 cut(s) 758, 1311
BsaXI ACNNNNNCTCC 2 cut(s) 2010, 2040
Bsc4I CCNNNNNNNGG 5 cut(s) 761, 762, 1045, 1080, 1311
Bse1I ACTGG 3 cut(s) 433, 1347, 2019
Bse21I CCTNAGG 1 cut(s) 138
Bse3DI GCAATG 1 cut(s) 1023
Bse8I GATNNNNATC 2 cut(s) 1545, 2042
BseAI TCCGGA 2 cut(s) 758, 1311
BseBI CCWGG 2 cut(s) 1127, 1776
BseCI ATCGAT 1 cut(s) 2712
BseDI CCNNGG 5 cut(s) 474, 657, 1125, 1387, 1836
BseGI GGATG 3 cut(s) 418, 772, 1945
BseJI GATNNNNATC 2 cut(s) 1545, 2042
BseLI CCNNNNNNNGG 5 cut(s) 761, 762, 1045, 1080, 1311
BseMI GCAATG 1 cut(s) 1023
BseMII CTCAG 4 cut(s) 129, 385, 651, 2063
BseNI ACTGG 3 cut(s) 433, 1347, 2019
BseRI GAGGAG 3 cut(s) 416, 723, 2933
BseSI GKGCMC 2 cut(s) 123, 651
BseXI GCAGC 7 cut(s) 53, 56, 844, 2345, 2740, 2888, 2969
BsgI GTGCAG 2 cut(s) 2477, 2514
Bsh1236I CGCG 2 cut(s) 311, 520
BshFI GGCC 3 cut(s) 727, 911, 2737
BshVI ATCGAT 1 cut(s) 2712
BsiHKAI GWGCWC 2 cut(s) 123, 2520
BsiHKCI CYCGRG 2 cut(s) 569, 2112
BsiSI CCGG 3 cut(s) 759, 1312, 1387
BsiWI CGTACG 1 cut(s) 306
BslFI GGGAC 1 cut(s) 1061
BslI CCNNNNNNNGG 5 cut(s) 761, 762, 1045, 1080, 1311
BsmAI GTCTC 3 cut(s) 1250, 1906, 2937
BsmFI GGGAC 1 cut(s) 1061
BsmI GAATGC 1 cut(s) 622
BsnI GGCC 3 cut(s) 727, 911, 2737
Bso31I GGTCTC 2 cut(s) 1250, 1906
BsoBI CYCGRG 2 cut(s) 569, 2112
Bsp1286I GDGCHC 3 cut(s) 123, 651, 2520
Bsp13I TCCGGA 2 cut(s) 758, 1311
Bsp143I GATC 8 cut(s) 506, 565, 1591, 1723, 2092, 2179, 2340, 2899
BspANI GGCC 3 cut(s) 727, 911, 2737
BspCNI CTCAG 4 cut(s) 130, 384, 650, 2062
BspDI ATCGAT 1 cut(s) 2712
BspEI TCCGGA 2 cut(s) 758, 1311
BspFNI CGCG 2 cut(s) 311, 520
BspLI GGNNCC 2 cut(s) 7, 609
BspMAI CTGCAG 1 cut(s) 43
BspMI ACCTGC 1 cut(s) 2643
BspPI GGATC 4 cut(s) 514, 573, 1731, 2174
BspQI GCTCTTC 2 cut(s) 2374, 2645
BspTI CTTAAG 1 cut(s) 2399
BspTNI GGTCTC 2 cut(s) 1250, 1906
BsrDI GCAATG 1 cut(s) 1023
BsrI ACTGG 3 cut(s) 433, 1347, 2019
BssECI CCNNGG 5 cut(s) 474, 657, 1125, 1387, 1836
BssMI GATC 8 cut(s) 506, 565, 1591, 1723, 2092, 2179, 2340, 2899
BssSI CACGAG 1 cut(s) 457
BssT1I CCWWGG 1 cut(s) 657
Bst2BI CACGAG 1 cut(s) 457
Bst2UI CCWGG 2 cut(s) 1127, 1776
Bst4CI ACNGT 7 cut(s) 295, 646, 1052, 1294, 1490, 1888, 1936
Bst6I CTCTTC 7 cut(s) 8, 585, 741, 2374, 2550, 2574, 2645
BstAFI CTTAAG 1 cut(s) 2399
BstAPI GCANNNNNTGC 1 cut(s) 559
BstC8I GCNNGC 5 cut(s) 119, 494, 622, 678, 1284
BstDEI CTNAG 5 cut(s) 138, 371, 637, 861, 2049
BstDSI CCRYGG 1 cut(s) 474
BstEII GGTNACC 1 cut(s) 1129
BstF5I GGATG 3 cut(s) 418, 772, 1945
BstFNI CGCG 2 cut(s) 311, 520
BstHHI GCGC 2 cut(s) 1533, 2367
BstKTI GATC 8 cut(s) 509, 568, 1594, 1726, 2095, 2182, 2343, 2902
BstMAI GTCTC 3 cut(s) 1250, 1906, 2937
BstMBI GATC 8 cut(s) 506, 565, 1591, 1723, 2092, 2179, 2340, 2899
BstNI CCWGG 2 cut(s) 1127, 1776
BstNSI RCATGY 4 cut(s) 496, 562, 1282, 1516
BstPI GGTNACC 1 cut(s) 1129
BstSCI CCNGG 3 cut(s) 1125, 1386, 1774
BstSFI CTRYAG 1 cut(s) 39
BstSLI GKGCMC 2 cut(s) 123, 651
BstUI CGCG 2 cut(s) 311, 520
BstV1I GCAGC 7 cut(s) 53, 56, 844, 2345, 2740, 2888, 2969
BstV2I GAAGAC 3 cut(s) 622, 1902, 2196
BstX2I RGATCY 3 cut(s) 565, 1723, 2179
BstYI RGATCY 3 cut(s) 565, 1723, 2179
Bsu15I ATCGAT 1 cut(s) 2712
Bsu36I CCTNAGG 1 cut(s) 138
BsuRI GGCC 3 cut(s) 727, 911, 2737
BsuTUI ATCGAT 1 cut(s) 2712
BtgI CCRYGG 1 cut(s) 474
BtgZI GCGATG 1 cut(s) 2460
BtrI CACGTC 1 cut(s) 127
BtsCI GGATG 3 cut(s) 418, 772, 1945
BtsIMutI CAGTG 5 cut(s) 1057, 1354, 1495, 1941, 2123
BveI ACCTGC 1 cut(s) 2643
Cac8I GCNNGC 5 cut(s) 119, 494, 622, 678, 1284
CaiI CAGNNNCTG 1 cut(s) 644
CfoI GCGC 2 cut(s) 1533, 2367
Cfr13I GGNCC 3 cut(s) 726, 1036, 1840
ClaI ATCGAT 1 cut(s) 2712
CseI GACGC 4 cut(s) 291, 526, 863, 947
CsiI ACCWGGT 1 cut(s) 1774
Csp6I GTAC 8 cut(s) 133, 307, 385, 499, 775, 1697, 1753, 2215
CviQI GTAC 8 cut(s) 133, 307, 385, 499, 775, 1697, 1753, 2215
DdeI CTNAG 5 cut(s) 138, 371, 637, 861, 2049
DpnI GATC 8 cut(s) 508, 567, 1593, 1725, 2094, 2181, 2342, 2901
DpnII GATC 8 cut(s) 506, 565, 1591, 1723, 2092, 2179, 2340, 2899
DraI TTTAAA 2 cut(s) 1716, 2389
DraIII CACNNNGTG 1 cut(s) 127
DriI GACNNNNNGTC 1 cut(s) 1953
Eam1104I CTCTTC 7 cut(s) 8, 585, 741, 2374, 2550, 2574, 2645
Eam1105I GACNNNNNGTC 1 cut(s) 1953
EarI CTCTTC 7 cut(s) 8, 585, 741, 2374, 2550, 2574, 2645
EciI GGCGGA 2 cut(s) 144, 502
Ecl136II GAGCTC 1 cut(s) 2518
Eco130I CCWWGG 1 cut(s) 657
Eco24I GRGCYC 1 cut(s) 2520
Eco31I GGTCTC 2 cut(s) 1250, 1906
Eco32I GATATC 1 cut(s) 928
Eco47I GGWCC 2 cut(s) 1036, 1840
Eco53kI GAGCTC 1 cut(s) 2518
Eco81I CCTNAGG 1 cut(s) 138
Eco88I CYCGRG 2 cut(s) 569, 2112
Eco91I GGTNACC 1 cut(s) 1129
EcoICRI GAGCTC 1 cut(s) 2518
EcoO65I GGTNACC 1 cut(s) 1129
EcoRI GAATTC 1 cut(s) 2725
EcoRII CCWGG 2 cut(s) 1125, 1774
EcoRV GATATC 1 cut(s) 928
EcoT14I CCWWGG 1 cut(s) 657
EcoT22I ATGCAT 2 cut(s) 242, 1415
EcoT38I GRGCYC 1 cut(s) 2520
ErhI CCWWGG 1 cut(s) 657
FalI AAGNNNNNCTT 6 cut(s) 1742, 1774, 2382, 2414, 2670, 2702
FaqI GGGAC 1 cut(s) 1061
FauI CCCGC 3 cut(s) 193, 555, 2583
FblI GTMKAC 1 cut(s) 2068
FokI GGATG 3 cut(s) 425, 779, 1952
FriOI GRGCYC 1 cut(s) 2520
FspBI CTAG 5 cut(s) 1436, 1694, 1950, 2429, 2442
GlaI GCGC 2 cut(s) 1532, 2366
GsuI CTGGAG 3 cut(s) 450, 1102, 1631
HaeIII GGCC 3 cut(s) 727, 911, 2737
HapII CCGG 3 cut(s) 759, 1312, 1387
HgaI GACGC 4 cut(s) 291, 526, 863, 947
HhaI GCGC 2 cut(s) 1533, 2367
Hin6I GCGC 2 cut(s) 1531, 2365
HinP1I GCGC 2 cut(s) 1531, 2365
HincII GTYRAC 3 cut(s) 97, 2069, 2505
HindII GTYRAC 3 cut(s) 97, 2069, 2505
HindIII AAGCTT 1 cut(s) 1815
HpaII CCGG 3 cut(s) 759, 1312, 1387
HphI GGTGA 6 cut(s) 478, 526, 952, 1364, 1891, 2274
Hpy166II GTNNAC 4 cut(s) 97, 121, 2069, 2505
Hpy8I GTNNAC 4 cut(s) 97, 121, 2069, 2505
Hpy99I CGWCG 3 cut(s) 128, 307, 857
HpyAV CCTTC 7 cut(s) 180, 211, 862, 883, 1220, 1270, 2458
HpyCH4III ACNGT 7 cut(s) 295, 646, 1052, 1294, 1490, 1888, 1936
HpyCH4IV ACGT 3 cut(s) 126, 340, 1402
HpyF3I CTNAG 5 cut(s) 138, 371, 637, 861, 2049
HpySE526I ACGT 3 cut(s) 126, 340, 1402
HspAI GCGC 2 cut(s) 1531, 2365
Kpn2I TCCGGA 2 cut(s) 758, 1311
Kzo9I GATC 8 cut(s) 506, 565, 1591, 1723, 2092, 2179, 2340, 2899
LguI GCTCTTC 2 cut(s) 2374, 2645
LmnI GCTCC 5 cut(s) 52, 489, 613, 847, 1627
Lsp1109I GCAGC 7 cut(s) 53, 56, 844, 2345, 2740, 2888, 2969
LweI GCATC 4 cut(s) 1180, 1449, 1891, 2596
MabI ACCWGGT 1 cut(s) 1774
MaeI CTAG 5 cut(s) 1436, 1694, 1950, 2429, 2442
MaeII ACGT 3 cut(s) 126, 340, 1402
MalI GATC 8 cut(s) 508, 567, 1593, 1725, 2094, 2181, 2342, 2901
MboI GATC 8 cut(s) 506, 565, 1591, 1723, 2092, 2179, 2340, 2899
MfeI CAATTG 2 cut(s) 1526, 1656
MflI RGATCY 3 cut(s) 565, 1723, 2179
MhlI GDGCHC 3 cut(s) 123, 651, 2520
MlyI GAGTC 3 cut(s) 29, 263, 2074
MmeI TCCRAC 3 cut(s) 48, 876, 1014
Mph1103I ATGCAT 2 cut(s) 242, 1415
MroI TCCGGA 2 cut(s) 758, 1311
MroXI GAANNNNTTC 1 cut(s) 2856
MslI CAYNNNNRTG 2 cut(s) 602, 1418
MspA1I CMGCKG 1 cut(s) 914
MspCI CTTAAG 1 cut(s) 2399
MspI CCGG 3 cut(s) 759, 1312, 1387
MspR9I CCNGG 3 cut(s) 1127, 1388, 1776
MunI CAATTG 2 cut(s) 1526, 1656
Mva1269I GAATGC 1 cut(s) 622
MvaI CCWGG 2 cut(s) 1127, 1776
MvnI CGCG 2 cut(s) 311, 520
NciI CCSGG 1 cut(s) 1388
NdeII GATC 8 cut(s) 506, 565, 1591, 1723, 2092, 2179, 2340, 2899
NlaIV GGNNCC 2 cut(s) 7, 609
NmuCI GTSAC 2 cut(s) 514, 1846
NsiI ATGCAT 2 cut(s) 242, 1415
NspI RCATGY 4 cut(s) 496, 562, 1282, 1516
PaeI GCATGC 1 cut(s) 496
PaeR7I CTCGAG 2 cut(s) 569, 2112
PciSI GCTCTTC 2 cut(s) 2374, 2645
PctI GAATGC 1 cut(s) 622
PdmI GAANNNNTTC 1 cut(s) 2856
PfeI GAWTC 7 cut(s) 1186, 1522, 1646, 1922, 2167, 2200, 2906
Pfl23II CGTACG 1 cut(s) 306
PflFI GACNNNGTC 3 cut(s) 971, 1844, 2948
PflMI CCANNNNNTGG 1 cut(s) 1080
PleI GAGTC 3 cut(s) 29, 262, 2073
PpsI GAGTC 3 cut(s) 29, 262, 2073
PshBI ATTAAT 1 cut(s) 2055
Psp124BI GAGCTC 1 cut(s) 2520
Psp6I CCWGG 2 cut(s) 1125, 1774
PspEI GGTNACC 1 cut(s) 1129
PspGI CCWGG 2 cut(s) 1125, 1774
PspLI CGTACG 1 cut(s) 306
PspN4I GGNNCC 2 cut(s) 7, 609
PspPI GGNCC 3 cut(s) 726, 1036, 1840
PsrI GAACNNNNNNTAC 2 cut(s) 377, 409
PstI CTGCAG 1 cut(s) 43
PstNI CAGNNNCTG 1 cut(s) 644
PsuI RGATCY 3 cut(s) 565, 1723, 2179
PsyI GACNNNGTC 3 cut(s) 971, 1844, 2948
RsaI GTAC 8 cut(s) 134, 308, 386, 500, 776, 1698, 1754, 2216
RsaNI GTAC 8 cut(s) 133, 307, 385, 499, 775, 1697, 1753, 2215
RseI CAYNNNNRTG 2 cut(s) 602, 1418
SacI GAGCTC 1 cut(s) 2520
SalI GTCGAC 1 cut(s) 2067
SapI GCTCTTC 2 cut(s) 2374, 2645
Sau3AI GATC 8 cut(s) 506, 565, 1591, 1723, 2092, 2179, 2340, 2899
Sau96I GGNCC 3 cut(s) 726, 1036, 1840
ScaI AGTACT 1 cut(s) 1754
SchI GAGTC 3 cut(s) 29, 263, 2074
ScrFI CCNGG 3 cut(s) 1127, 1388, 1776
SduI GDGCHC 3 cut(s) 123, 651, 2520
SexAI ACCWGGT 1 cut(s) 1774
SfaNI GCATC 4 cut(s) 1180, 1449, 1891, 2596
SfcI CTRYAG 1 cut(s) 39
Sfr274I CTCGAG 2 cut(s) 569, 2112
SinI GGWCC 2 cut(s) 1036, 1840
SlaI CTCGAG 2 cut(s) 569, 2112
SmiMI CAYNNNNRTG 2 cut(s) 602, 1418
SmlI CTYRAG 6 cut(s) 569, 1631, 2112, 2303, 2399, 2687
SmoI CTYRAG 6 cut(s) 569, 1631, 2112, 2303, 2399, 2687
SphI GCATGC 1 cut(s) 496
SspMI CTAG 5 cut(s) 1436, 1694, 1950, 2429, 2442
SstI GAGCTC 1 cut(s) 2520
StyD4I CCNGG 3 cut(s) 1125, 1386, 1774
StyI CCWWGG 1 cut(s) 657
TaaI ACNGT 7 cut(s) 295, 646, 1052, 1294, 1490, 1888, 1936
TaiI ACGT 3 cut(s) 129, 343, 1405
TaqI TCGA 9 cut(s) 210, 444, 570, 691, 2036, 2068, 2113, 2712, 2814
TatI WGTACW 5 cut(s) 384, 498, 774, 1696, 1752
TauI GCSGC 5 cut(s) 160, 163, 166, 169, 914
TfiI GAWTC 7 cut(s) 1186, 1522, 1646, 1922, 2167, 2200, 2906
TscAI CASTG 5 cut(s) 1057, 1354, 1495, 1941, 2130
TseFI GTSAC 2 cut(s) 514, 1846
TseI GCWGC 7 cut(s) 41, 44, 857, 2333, 2753, 2876, 2957
Tsp45I GTSAC 2 cut(s) 514, 1846
TspGWI ACGGA 3 cut(s) 247, 491, 731
TspRI CASTG 5 cut(s) 1057, 1354, 1495, 1941, 2130
Tth111I GACNNNGTC 3 cut(s) 971, 1844, 2948
Van91I CCANNNNNTGG 1 cut(s) 1080
Vha464I CTTAAG 1 cut(s) 2399
VneI GTGCAC 1 cut(s) 119
VpaK11BI GGWCC 2 cut(s) 1036, 1840
VspI ATTAAT 1 cut(s) 2055
XapI RAATTY 7 cut(s) 194, 662, 1316, 1555, 2725, 2780, 2912
XceI RCATGY 4 cut(s) 496, 562, 1282, 1516
XcmI CCANNNNNNNNNTGG 1 cut(s) 1606
XhoI CTCGAG 2 cut(s) 569, 2112
XmiI GTMKAC 1 cut(s) 2068
XmnI GAANNNNTTC 1 cut(s) 2856
XspI CTAG 5 cut(s) 1436, 1694, 1950, 2429, 2442
ZrmI AGTACT 1 cut(s) 1754
Zsp2I ATGCAT 2 cut(s) 242, 1415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.