MD17G1185700.v1.1

Belongs to the WD repeat SEC13 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0001675
Physical Location & Seq
Forward (+)
22038619 .. 22042188
3570 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1185700.v1.1.491

Sequence Viewer

Length: 1308 bp
ATGACTTCGATTTCTGAATCGATGACGTGGCGGCGAAACGCCATGATGACTTTTGATTCAGGGTGGGGCGATTTCCTCGGCGGCGTCCCCGGCCATATCGTGGCACACCCATGCACTCATATCACCTTGCGTGTTTTTCAAGTCTGTCTCTCAAGCCCAATGGGCCGCTCTTCTCCAGGTATTGGGCTTCTGGGGAATAATGGGCCTAATTTCAGCAAAAGCGTTGTATGCATAGAAACTGAAAGCACAGAGAAGTCTTCTTCCTGTGCGAGTTTCTTCGTTTCGCAGCAGCAGATACAATTCGCAATCCGCTTCCTTCTCAAACTGCGTCGTTTGGATCCCAATCTTTGCTTCCCCAGAGATCTCAGTGCTGAAATTTTGCTGATTATATTGATGGAGAAAATGCCTGCACAAAAGGTTGAGACTGGTCACCAGGACACAGTCCATGATGTGGTCATGGATTACTATGGTAAGCGCCTCGCCACAGCTTCATCCGACAACACAATTAAGATAATTGGGGTGAGCAATTCGTCCTCTCAGCATCTTGCAACCCTGACTGGTCACCAGGGGCCGGTTTGGCAGGTTGCTTGGGCTCATCCGAAATTCGGGTCTTTACTTGCTTCCTGTTCTTATGATGGGCGTGTCATACTGTGGAAGGAAGGTAATCAGAATGAATGGACCCAAGCTCATGTTTTTGATGACCACAAATCGTCTGTGAACTCGATTGCTTGGGCTCCTCATGAACTCGGTCTTTGTTTGGCGTGTGGTTCTTCTGATGGGAACATCTCAGTTTTCACTGCAAGGTCGGATGGTGGCTGGGATACCTCAAGGATCGATCAAGCTCACCCAGTTGGTGTCACCTCTGTTTCTTGGGCTCCCTCAACAGCCCCAGGTGCTCTTGTTGGTTCTGGTCTGCTTGACCCTGTTCAGAAGCTGTGTTCCGGTGGCTGTGATAATACTGTAAAGGTGTGGAAGCTTGGTAATGGCGTTTGGAAGCTGGACTGCTTTCCGGCTCTTCAGATGCATGTTGATTGGGTCAGGGATGTTGCTTGGGCGCCCAACTTGGGACTGCCGAAATCTACGATTGCCAGTGCCTCACAGGATGGTAAGGTGATTGTATGGACTGTGGGCAAGGATGGGGATCAATGGGAAGGTAAGGTGCTACATGATTTCAATGCACCTGTTTGGAGGGTCTCATGGTCGCTGACCGGAAACATATTGGCTGTGGCTGATGGGAACAACAGCGTGACACTATGGAAGGAAGAAATAGATGGCGAGTGGCAACAGGTGACAACGGTTGAGCCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000323 GO:0002376 GO:0002474 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005764 GO:0005765 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005798 GO:0005829 GO:0006810 GO:0006886 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006996 GO:0008104 GO:0008150 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0012506 GO:0012507 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019882 GO:0019884 GO:0019886 GO:0022607 GO:0023051 GO:0023056 GO:0030117 GO:0030120 GO:0030127 GO:0030133 GO:0030134 GO:0030135 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0031080 GO:0031090 GO:0031410 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031982 GO:0031984 GO:0032006 GO:0032008 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0035459 GO:0035859 GO:0042175 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048002 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048475 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051668 GO:0061024 GO:0061700 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0090110 GO:0090114 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098827 GO:0098852 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko03013 ko04141 ko04150 map03013 map04141 map04150
Pfam Domains
Protein Families
WD40

Protein Analysis

436

Amino Acids

47.37

Weight (kDa)

5.94

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_WDHD1_1st PF24817 132 - 246 2.3e-12 WDHD1 first WD40 domain
Beta-prop_TEP1_2nd PF25047 132 - 245 7.8e-08 TEP-1 second beta-propeller
WD40_CDC20-Fz PF24807 140 - 293 3.8e-14 CDC20/Fizzy WD40 domain
WD40_MABP1-WDR62_2nd PF24782 141 - 268 9e-06 MABP1/WDR62 second WD40 domain
Beta-prop_WDR5 PF25175 142 - 292 1.4e-16 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 142 - 265 7.8e-14 WDR3 first beta-propeller domain
WDR55 PF24796 142 - 419 1.2e-06 WDR55
Beta-prop_THOC3 PF25174 144 - 293 1.8e-18 THOC3 beta-propeller domain
WD40_Prp19 PF24814 157 - 293 2e-12 Prp19 WD40 domain
Beta-prop_WDR35_TULP_N PF24797 177 - 293 3e-07 WDR35/TULP4 N-terminal
WD40 PF00400 180 - 218 2.5e-07 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 182 - 269 1.4e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_1st PF25173 227 - 420 4.8e-10 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 253 - 421 1.6e-06 CDC20/Fizzy WD40 domain
Beta-prop_THOC3 PF25174 310 - 420 2e-11 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 310 - 420 2.3e-10 WDR5 beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 571
AccB1I GGYRCC 1 cut(s) 1054
AccB7I CCANNNNNTGG 3 cut(s) 100, 182, 451
AccBSI CCGCTC 1 cut(s) 168
AciI CCGC 4 cut(s) 31, 81, 166, 310
AclWI GGATC 4 cut(s) 332, 345, 839, 1149
AcoI YGGCCR 1 cut(s) 91
AcsI RAATTY 2 cut(s) 375, 602
AcuI CTGAAG 1 cut(s) 1001
AcyI GRCGYC 2 cut(s) 84, 1055
AfiI CCNNNNNNNGG 6 cut(s) 100, 182, 451, 571, 605, 1064
AgsI TTSAA 2 cut(s) 140, 1174
AjiI CACGTC 1 cut(s) 27
AjnI CCWGG 4 cut(s) 175, 432, 564, 889
AjuI GAANNNNNNNTTGG 2 cut(s) 335, 367
AluBI AGCT 6 cut(s) 488, 686, 842, 934, 976, 997
AluI AGCT 6 cut(s) 488, 686, 842, 934, 976, 997
Alw21I GWGCWC 1 cut(s) 898
Alw26I GTCTC 3 cut(s) 152, 416, 1198
AlwI GGATC 4 cut(s) 332, 345, 839, 1149
AlwNI CAGNNNCTG 1 cut(s) 934
AoxI GGCC 4 cut(s) 91, 163, 203, 569
ApeKI GCWGC 2 cut(s) 286, 289
ApoI RAATTY 2 cut(s) 375, 602
ArsI GACNNNNNNTTYG 2 cut(s) 593, 625
AspLEI GCGC 2 cut(s) 477, 1057
AspS9I GGNCC 4 cut(s) 163, 203, 569, 678
AsuC2I CCSGG 1 cut(s) 90
AsuHPI GGTGA 8 cut(s) 115, 422, 532, 554, 836, 850, 1123, 1300
AvaII GGWCC 1 cut(s) 678
BamHI GGATCC 1 cut(s) 337
BanI GGYRCC 1 cut(s) 1054
BanII GRGCYC 3 cut(s) 595, 736, 877
BbsI GAAGAC 1 cut(s) 249
Bbv12I GWGCWC 1 cut(s) 898
BbvI GCAGC 2 cut(s) 298, 301
BccI CCATC 8 cut(s) 388, 629, 770, 803, 1097, 1130, 1226, 1265
BceAI ACGGC 1 cut(s) 1288
BciT130I CCWGG 4 cut(s) 177, 434, 566, 891
BciVI GTATCC 1 cut(s) 814
BcnI CCSGG 1 cut(s) 90
BcoDI GTCTC 3 cut(s) 152, 416, 1198
BfoI RGCGCY 2 cut(s) 478, 1058
BfuAI ACCTGC 1 cut(s) 571
BfuI GTATCC 1 cut(s) 814
BglI GCCNNNNNGGC 2 cut(s) 162, 577
BglII AGATCT 1 cut(s) 361
BisI GCNGC 5 cut(s) 32, 82, 166, 287, 290
BlsI GCNGC 5 cut(s) 33, 83, 167, 288, 291
Bme1390I CCNGG 5 cut(s) 90, 177, 434, 566, 891
Bme18I GGWCC 1 cut(s) 678
BmgBI CACGTC 1 cut(s) 27
BmgT120I GGNCC 4 cut(s) 163, 203, 569, 678
BmiI GGNNCC 6 cut(s) 339, 570, 680, 735, 876, 1056
BmrFI CCNGG 5 cut(s) 90, 177, 434, 566, 891
BmrI ACTGGG 1 cut(s) 842
BmsI GCATC 2 cut(s) 550, 1011
BmuI ACTGGG 1 cut(s) 842
BpiI GAAGAC 1 cut(s) 249
BpmI CTGGAG 1 cut(s) 159
BpuEI CTTGAG 2 cut(s) 136, 811
BpuMI CCSGG 1 cut(s) 90
Bsa29I ATCGAT 2 cut(s) 20, 834
BsaBI GATNNNNATC 2 cut(s) 342, 1140
BsaHI GRCGYC 2 cut(s) 84, 1055
BsaI GGTCTC 1 cut(s) 1198
BsaJI CCNNGG 4 cut(s) 76, 88, 565, 889
BsaWI WCCGGW 2 cut(s) 941, 1208
Bsc4I CCNNNNNNNGG 6 cut(s) 100, 182, 451, 571, 605, 1064
Bse118I RCCGGY 1 cut(s) 571
Bse1I ACTGG 4 cut(s) 430, 562, 848, 1089
Bse8I GATNNNNATC 2 cut(s) 342, 1140
BseBI CCWGG 4 cut(s) 177, 434, 566, 891
BseCI ATCGAT 2 cut(s) 20, 834
BseDI CCNNGG 4 cut(s) 76, 88, 565, 889
BseGI GGATG 6 cut(s) 491, 595, 814, 1048, 1108, 1141
BseJI GATNNNNATC 2 cut(s) 342, 1140
BseLI CCNNNNNNNGG 6 cut(s) 100, 182, 451, 571, 605, 1064
BseMII CTCAG 3 cut(s) 379, 551, 801
BseNI ACTGG 4 cut(s) 430, 562, 848, 1089
BseRI GAGGAG 1 cut(s) 726
BseXI GCAGC 2 cut(s) 298, 301
BseYI CCCAGC 1 cut(s) 816
BsgI GTGCAG 1 cut(s) 393
BshFI GGCC 4 cut(s) 93, 165, 205, 571
BshNI GGYRCC 1 cut(s) 1054
BshVI ATCGAT 2 cut(s) 20, 834
BsiHKAI GWGCWC 1 cut(s) 898
BsiSI CCGG 5 cut(s) 90, 572, 942, 1010, 1209
BslFI GGGAC 2 cut(s) 71, 1080
BslI CCNNNNNNNGG 6 cut(s) 100, 182, 451, 571, 605, 1064
BsmAI GTCTC 3 cut(s) 152, 416, 1198
BsmFI GGGAC 2 cut(s) 71, 1080
BsnI GGCC 4 cut(s) 93, 165, 205, 571
Bso31I GGTCTC 1 cut(s) 1198
Bsp1286I GDGCHC 4 cut(s) 595, 736, 877, 898
Bsp143I GATC 5 cut(s) 337, 361, 831, 835, 1141
BspACI CCGC 4 cut(s) 31, 81, 166, 310
BspANI GGCC 4 cut(s) 93, 165, 205, 571
BspCNI CTCAG 3 cut(s) 378, 550, 800
BspDI ATCGAT 2 cut(s) 20, 834
BspHI TCATGA 1 cut(s) 739
BspLI GGNNCC 6 cut(s) 339, 570, 680, 735, 876, 1056
BspMI ACCTGC 1 cut(s) 571
BspPI GGATC 4 cut(s) 332, 345, 839, 1149
BspQI GCTCTTC 2 cut(s) 175, 1020
BspT107I GGYRCC 1 cut(s) 1054
BspTNI GGTCTC 1 cut(s) 1198
BsrBI CCGCTC 1 cut(s) 168
BsrFI RCCGGY 1 cut(s) 571
BsrI ACTGG 4 cut(s) 430, 562, 848, 1089
BssAI RCCGGY 1 cut(s) 571
BssECI CCNNGG 4 cut(s) 76, 88, 565, 889
BssMI GATC 5 cut(s) 337, 361, 831, 835, 1141
BssNI GRCGYC 2 cut(s) 84, 1055
Bst2UI CCWGG 4 cut(s) 177, 434, 566, 891
Bst4CI ACNGT 5 cut(s) 442, 651, 961, 1126, 1297
Bst6I CTCTTC 2 cut(s) 175, 1020
BstACI GRCGYC 2 cut(s) 84, 1055
BstC8I GCNNGC 1 cut(s) 408
BstDEI CTNAG 3 cut(s) 365, 537, 787
BstEII GGTNACC 2 cut(s) 428, 560
BstF5I GGATG 6 cut(s) 491, 595, 814, 1048, 1108, 1141
BstH2I RGCGCY 2 cut(s) 478, 1058
BstHHI GCGC 2 cut(s) 477, 1057
BstKTI GATC 5 cut(s) 340, 364, 834, 838, 1144
BstMAI GTCTC 3 cut(s) 152, 416, 1198
BstMBI GATC 5 cut(s) 337, 361, 831, 835, 1141
BstMWI GCNNNNNNNGC 5 cut(s) 90, 162, 228, 577, 893
BstNI CCWGG 4 cut(s) 177, 434, 566, 891
BstNSI RCATGY 1 cut(s) 1028
BstPI GGTNACC 2 cut(s) 428, 560
BstSCI CCNGG 5 cut(s) 88, 175, 432, 564, 889
BstV1I GCAGC 2 cut(s) 298, 301
BstV2I GAAGAC 1 cut(s) 249
BstX2I RGATCY 2 cut(s) 337, 361
BstYI RGATCY 2 cut(s) 337, 361
Bsu15I ATCGAT 2 cut(s) 20, 834
BsuI GTATCC 1 cut(s) 814
BsuRI GGCC 4 cut(s) 93, 165, 205, 571
BsuTUI ATCGAT 2 cut(s) 20, 834
BtrI CACGTC 1 cut(s) 27
BtsCI GGATG 6 cut(s) 491, 595, 814, 1048, 1108, 1141
BtsI GCAGTG 1 cut(s) 795
BtsIMutI CAGTG 3 cut(s) 373, 795, 1096
BveI ACCTGC 1 cut(s) 571
Cac8I GCNNGC 1 cut(s) 408
CaiI CAGNNNCTG 1 cut(s) 934
CciI TCATGA 1 cut(s) 739
CfoI GCGC 2 cut(s) 477, 1057
Cfr10I RCCGGY 1 cut(s) 571
Cfr13I GGNCC 4 cut(s) 163, 203, 569, 678
ClaI ATCGAT 2 cut(s) 20, 834
CseI GACGC 2 cut(s) 73, 317
CviAII CATG 9 cut(s) 43, 111, 446, 457, 689, 740, 1025, 1166, 1197
DdeI CTNAG 3 cut(s) 365, 537, 787
DinI GGCGCC 1 cut(s) 1056
DpnI GATC 5 cut(s) 339, 363, 833, 837, 1143
DpnII GATC 5 cut(s) 337, 361, 831, 835, 1141
EaeI YGGCCR 1 cut(s) 91
Eam1104I CTCTTC 2 cut(s) 175, 1020
EarI CTCTTC 2 cut(s) 175, 1020
Eco24I GRGCYC 3 cut(s) 595, 736, 877
Eco31I GGTCTC 1 cut(s) 1198
Eco47I GGWCC 1 cut(s) 678
Eco57I CTGAAG 1 cut(s) 1001
Eco91I GGTNACC 2 cut(s) 428, 560
EcoO65I GGTNACC 2 cut(s) 428, 560
EcoRII CCWGG 4 cut(s) 175, 432, 564, 889
EcoT22I ATGCAT 2 cut(s) 233, 1026
EcoT38I GRGCYC 3 cut(s) 595, 736, 877
EgeI GGCGCC 1 cut(s) 1056
EheI GGCGCC 1 cut(s) 1056
FaeI CATG 9 cut(s) 46, 114, 449, 460, 692, 743, 1028, 1169, 1200
FaqI GGGAC 2 cut(s) 71, 1080
FatI CATG 9 cut(s) 42, 110, 445, 456, 688, 739, 1024, 1165, 1196
Fnu4HI GCNGC 5 cut(s) 32, 82, 166, 287, 290
FokI GGATG 6 cut(s) 478, 582, 821, 1055, 1115, 1148
FriOI GRGCYC 3 cut(s) 595, 736, 877
Fsp4HI GCNGC 5 cut(s) 32, 82, 166, 287, 290
GlaI GCGC 2 cut(s) 476, 1056
GluI GCNGC 5 cut(s) 32, 82, 166, 287, 290
GsaI CCCAGC 1 cut(s) 820
GsuI CTGGAG 1 cut(s) 159
HaeII RGCGCY 2 cut(s) 478, 1058
HaeIII GGCC 4 cut(s) 93, 165, 205, 571
HapII CCGG 5 cut(s) 90, 572, 942, 1010, 1209
HgaI GACGC 2 cut(s) 73, 317
HhaI GCGC 2 cut(s) 477, 1057
Hin1I GRCGYC 2 cut(s) 84, 1055
Hin1II CATG 9 cut(s) 46, 114, 449, 460, 692, 743, 1028, 1169, 1200
Hin6I GCGC 2 cut(s) 475, 1055
HinP1I GCGC 2 cut(s) 475, 1055
HindIII AAGCTT 1 cut(s) 974
HinfI GANTC 2 cut(s) 17, 56
HpaII CCGG 5 cut(s) 90, 572, 942, 1010, 1209
HphI GGTGA 8 cut(s) 115, 422, 532, 554, 836, 850, 1123, 1300
Hpy166II GTNNAC 1 cut(s) 718
Hpy188I TCNGA 8 cut(s) 16, 496, 600, 669, 775, 808, 930, 1020
Hpy188III TCNNGA 1 cut(s) 740
Hpy8I GTNNAC 1 cut(s) 718
Hpy99I CGWCG 1 cut(s) 333
HpyAV CCTTC 5 cut(s) 326, 649, 653, 1145, 1252
HpyCH4III ACNGT 5 cut(s) 442, 651, 961, 1126, 1297
HpyCH4IV ACGT 1 cut(s) 26
HpyCH4V TGCA 7 cut(s) 114, 231, 410, 548, 800, 1024, 1178
HpyF10VI GCNNNNNNNGC 5 cut(s) 90, 162, 228, 577, 893
HpyF3I CTNAG 3 cut(s) 365, 537, 787
HpySE526I ACGT 1 cut(s) 26
Hsp92I GRCGYC 2 cut(s) 84, 1055
Hsp92II CATG 9 cut(s) 46, 114, 449, 460, 692, 743, 1028, 1169, 1200
HspAI GCGC 2 cut(s) 475, 1055
KasI GGCGCC 1 cut(s) 1054
Kzo9I GATC 5 cut(s) 337, 361, 831, 835, 1141
LguI GCTCTTC 2 cut(s) 175, 1020
LmnI GCTCC 2 cut(s) 739, 880
Lsp1109I GCAGC 2 cut(s) 298, 301
LweI GCATC 2 cut(s) 550, 1011
MaeII ACGT 1 cut(s) 26
MaeIII GTNAC 5 cut(s) 428, 560, 856, 1246, 1288
MalI GATC 5 cut(s) 339, 363, 833, 837, 1143
MbiI CCGCTC 1 cut(s) 168
MboI GATC 5 cut(s) 337, 361, 831, 835, 1141
MboII GAAGA 7 cut(s) 162, 249, 252, 268, 762, 1007, 1274
MflI RGATCY 2 cut(s) 337, 361
MhlI GDGCHC 4 cut(s) 595, 736, 877, 898
MluCI AATT 7 cut(s) 208, 299, 375, 504, 513, 526, 602
Mly113I GGCGCC 1 cut(s) 1055
MmeI TCCRAC 2 cut(s) 519, 786
MnlI CCTC 9 cut(s) 86, 488, 544, 747, 835, 871, 889, 1105, 1182
Mph1103I ATGCAT 2 cut(s) 233, 1026
MseI TTAA 1 cut(s) 507
MslI CAYNNNNRTG 1 cut(s) 109
MspI CCGG 5 cut(s) 90, 572, 942, 1010, 1209
MspR9I CCNGG 5 cut(s) 90, 177, 434, 566, 891
MvaI CCWGG 4 cut(s) 177, 434, 566, 891
MwoI GCNNNNNNNGC 5 cut(s) 90, 162, 228, 577, 893
NarI GGCGCC 1 cut(s) 1055
NciI CCSGG 1 cut(s) 90
NdeII GATC 5 cut(s) 337, 361, 831, 835, 1141
NlaIII CATG 9 cut(s) 46, 114, 449, 460, 692, 743, 1028, 1169, 1200
NlaIV GGNNCC 6 cut(s) 339, 570, 680, 735, 876, 1056
NmeAIII GCCGAG 1 cut(s) 57
NmuCI GTSAC 5 cut(s) 428, 560, 856, 1246, 1288
NsiI ATGCAT 2 cut(s) 233, 1026
NspI RCATGY 1 cut(s) 1028
PagI TCATGA 1 cut(s) 739
PciSI GCTCTTC 2 cut(s) 175, 1020
PcsI WCGNNNNNNNCGW 1 cut(s) 1301
PfeI GAWTC 2 cut(s) 17, 56
PflFI GACNNNGTC 1 cut(s) 440
PflMI CCANNNNNTGG 3 cut(s) 100, 182, 451
PkrI GCNGC 5 cut(s) 33, 83, 167, 288, 291
PluTI GGCGCC 1 cut(s) 1058
Psp6I CCWGG 4 cut(s) 175, 432, 564, 889
PspEI GGTNACC 2 cut(s) 428, 560
PspFI CCCAGC 1 cut(s) 816
PspGI CCWGG 4 cut(s) 175, 432, 564, 889
PspN4I GGNNCC 6 cut(s) 339, 570, 680, 735, 876, 1056
PspPI GGNCC 4 cut(s) 163, 203, 569, 678
PstNI CAGNNNCTG 1 cut(s) 934
PsuI RGATCY 2 cut(s) 337, 361
PsyI GACNNNGTC 1 cut(s) 440
RseI CAYNNNNRTG 1 cut(s) 109
SapI GCTCTTC 2 cut(s) 175, 1020
SaqAI TTAA 1 cut(s) 507
SatI GCNGC 5 cut(s) 32, 82, 166, 287, 290
Sau3AI GATC 5 cut(s) 337, 361, 831, 835, 1141
Sau96I GGNCC 4 cut(s) 163, 203, 569, 678
ScrFI CCNGG 5 cut(s) 90, 177, 434, 566, 891
SduI GDGCHC 4 cut(s) 595, 736, 877, 898
SfaNI GCATC 2 cut(s) 550, 1011
SfoI GGCGCC 1 cut(s) 1056
SinI GGWCC 1 cut(s) 678
SmiMI CAYNNNNRTG 1 cut(s) 109
SmlI CTYRAG 2 cut(s) 151, 826
SmoI CTYRAG 2 cut(s) 151, 826
Sse9I AATT 7 cut(s) 208, 299, 375, 504, 513, 526, 602
SsiI CCGC 4 cut(s) 31, 81, 166, 310
SspDI GGCGCC 1 cut(s) 1054
StyD4I CCNGG 5 cut(s) 88, 175, 432, 564, 889
TaaI ACNGT 5 cut(s) 442, 651, 961, 1126, 1297
TaiI ACGT 1 cut(s) 29
TaqI TCGA 4 cut(s) 8, 20, 722, 834
TaqII GACCGA 1 cut(s) 737
TasI AATT 7 cut(s) 208, 299, 375, 504, 513, 526, 602
TauI GCSGC 3 cut(s) 34, 84, 168
TfiI GAWTC 2 cut(s) 17, 56
Tru1I TTAA 1 cut(s) 507
Tru9I TTAA 1 cut(s) 507
TscAI CASTG 3 cut(s) 373, 802, 1096
TseFI GTSAC 5 cut(s) 428, 560, 856, 1246, 1288
TseI GCWGC 2 cut(s) 286, 289
Tsp45I GTSAC 5 cut(s) 428, 560, 856, 1246, 1288
TspDTI ATGAA 3 cut(s) 480, 687, 756
TspRI CASTG 3 cut(s) 373, 802, 1096
Tth111I GACNNNGTC 1 cut(s) 440
Van91I CCANNNNNTGG 3 cut(s) 100, 182, 451
VpaK11BI GGWCC 1 cut(s) 678
XapI RAATTY 2 cut(s) 375, 602
XceI RCATGY 1 cut(s) 1028
Zsp2I ATGCAT 2 cut(s) 233, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.