Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001675

Physical Location & Seq

Genomic Coordinates Forward (+)

67425082 .. 67426398

Gene Structure 1317 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0545000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1317 bp

ATGAGTGTTCTTGAATACCCAGATGCCATTAACGCTCCGGAGCTTCAGGTCTGGAACAACGCCGCCTTCGACGACAATGAGGGCTCTGGATTCTCCGGCGACGCCGTTAAAGCTTCCTGGTCTTTCGAATCCGATTGCAGCAAAGAGAATCTGAGCCCGGTTCCGAAAACCCCTGTTTTCGCGGCGTCCTCGGTGCCGTTTAAGCCGCTTAATGGAAATTCGCGGCGGTTGTCTGTGGCGCCGAAGAAGATGGGGTTTGAGGTTGAAGAAGAGAAAGTTCGAGACTTGGGGAAGATCGATTCGGAGATTGAGGAAATCGAGAAGGAGATAGGCCGATTGAATTCGAGGCTGGAGTTGCTGAAGCTCGAGAAGGCCCAGAAGGCGGCGGAGAAGCGCGGCAGGGTTGTGGCGGCGAAGTTCATGGAGCCGCCGAAGCAGAGCGTGAAGAATTCCGATGGGTTGAGAAAGATTGAGGAGTCTTTGAATTTGAGCGCAAGGCCGAAGGTTAATCGGAGAGGTATGAGTTTGGGGCCGTCGGAGATTATCGCCGGAGCCGGGTTCCGGCGGCCGAGTAAGCTTGAGATAACTCCTGTTCAAAAAATACAGGATCGCCGGAAATCTTGCTTCTGGAAGCTTCAAGACATTGATGAACTGAGGGTTACTAAAGAAAGGGGTAAAAGCACGAGTCTTAGCCCGAAATCGAGGAAAACTGCGTCGAAAATCGGAGCTCCGAAACAGGCTGCAACTTCAATTGGGGGTTCTAAGAGGCCTGTGAAGAAGGAAGACAAGGTTCTTGGTTCAATTGAGCCCAAGAAGCTTTTCAAAGAAGGGGAGAAGTCTGTGCCTAACAAGAAGCCAGTCAAGGCTGGGAGGGTTGTGGCAAGCAGGTACAATCAGATTGGGAGTTCTTCGGCTGCGGCGGCGGATGGCCGGAAAAGGTCTTTGCCGGATGATGATAAGGAAGATGGGAGCCGGTGTGAGAAGAAGCGCGTGTCATTGGTGGGGAGGCCACGTGGCATTGGGAGGGAGGGGTCTAGGAGTGTTGGACCGGAGAGTAGGATGAAGAAGAGGTGGGAGATTCCTAGTGAGGTCGTGGTGTTCCAGGGTGTGGAGGAGGATGGTGTTGCTGAAATGGGTGCTGTGAATGATGGGCTGCCGAAGATTAGGACTGTTCGATGTGTTAATGACACGCCAAGGGGGTCAGGGCCGGCGAAAAGGGTGGCGGAATTAGTTGGGATGAAGAAGTATTTTAGCAACAGTGATGAGTTCTGCCAGGAATTGAGTTTTGCGGAAGAGGAGGATGGTGAAGAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0002376 GO:0002474 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005730 GO:0005737 GO:0005764 GO:0005765 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005798 GO:0005829 GO:0006810 GO:0006886 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006996 GO:0008104 GO:0008150 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0012506 GO:0012507 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019882 GO:0019884 GO:0019886 GO:0022607 GO:0023051 GO:0023056 GO:0030117 GO:0030120 GO:0030127 GO:0030133 GO:0030134 GO:0030135 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0031080 GO:0031090 GO:0031410 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031982 GO:0031984 GO:0032006 GO:0032008 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0035459 GO:0035859 GO:0042175 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048002 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048475 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051668 GO:0061024 GO:0061700 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0090110 GO:0090114 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098827 GO:0098852 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko03013 ko04141 ko04150 map03013 map04141 map04150

Pfam Domains

Protein Families

WD40

Protein Analysis

438

Amino Acids

48.19

Weight (kDa)

9.44

Isoelectric Point (pI)

59.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001675)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30050 AT3G01340 AT3G01340
fragaria_vesca	FvH4_6g32220 FvH4_6g32220 FvH4_6g32220 FvH4_6g32220 FvH4_6g32220 FvH4_6g32220 FvH4_6g49840 FvH4_6g49840 FvH4_6g49840
malus_domestica	MD09G1041000.v1.1 MD09G1205500.v1.1 MD17G1042300.v1.1 MD17G1185700.v1.1
prunus_persica	Prupe.3G060800_v2.0.a1 Prupe.3G276700_v2.0.a1
pyrus_communis	pycom09g12210 pycom111g03200 pycom17g03790 pycom17g19510
rosa_chinensis	RchiOBHm_Chr2g0140101 RchiOBHm_Chr2g0170031
rosa_laevigata	RLG00000010169 RLG00000019849 RLG00000021917
rosa_multiflora	Rmu_co8506925.1_g000001 Rmu_sc0003244.1_g000028 Rmu_sc0013078.1_g000015 Rmu_ssc0000389.1_g000004
rosa_roxburghii	Rroxscaffold_2G00081680 Rroxscaffold_2G00105060
rosa_rugosa	Rorug02G0361100 Rorug02G0361200 Rorug02G0545000 Rorug02G0545100
rosa_samantha	Rh2AG411800 Rh2AG617500 Rh2BG422100 Rh2BG628800 Rh2CG397900 Rh2CG598300 Rh2DG431500 Rh2DG640000 Rh2DG640600 Rh4BG007800
rosa_wichuraiana	Rw2G033740 Rw2G051120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	876
AccB1I	GGYRCC	2 cut(s)	193, 238
AccB7I	CCANNNNNTGG	1 cut(s)	1108
AccII	CGCG	4 cut(s)	182, 223, 396, 990
AccIII	TCCGGA	1 cut(s)	37
AclWI	GGATC	1 cut(s)	615
AcoI	YGGCCR	2 cut(s)	566, 928
AcsI	RAATTY	4 cut(s)	217, 340, 448, 484
AcuI	CTGAAG	2 cut(s)	29, 380
AcvI	CACGTG	1 cut(s)	1013
AcyI	GRCGYC	3 cut(s)	102, 185, 239
AfaI	GTAC	1 cut(s)	890
AfiI	CCNNNNNNNGG	5 cut(s)	212, 382, 555, 561, 1108
AgsI	TTSAA	9 cut(s)	14, 266, 340, 484, 596, 638, 750, 801, 823
AjnI	CCWGG	3 cut(s)	116, 1101, 1272
AjuI	GAANNNNNNNTTGG	2 cut(s)	803, 835
AluBI	AGCT	7 cut(s)	43, 113, 364, 577, 634, 728, 817
AluI	AGCT	7 cut(s)	43, 113, 364, 577, 634, 728, 817
Alw21I	GWGCWC	1 cut(s)	730
Alw26I	GTCTC	1 cut(s)	276
AlwI	GGATC	1 cut(s)	615
Ama87I	CYCGRG	1 cut(s)	365
Aor13HI	TCCGGA	1 cut(s)	37
AoxI	GGCC	9 cut(s)	331, 372, 497, 530, 566, 767, 928, 1007, 1205
ApeKI	GCWGC	4 cut(s)	138, 740, 914, 1153
ApoI	RAATTY	4 cut(s)	217, 340, 448, 484
Asp700I	GAANNNNTTC	1 cut(s)	818
AspLEI	GCGC	4 cut(s)	241, 396, 494, 990
AspS9I	GGNCC	4 cut(s)	373, 530, 1046, 1205
AsuC2I	CCSGG	2 cut(s)	158, 556
AsuHPI	GGTGA	1 cut(s)	1316
AsuII	TTCGAA	1 cut(s)	126
AvaI	CYCGRG	1 cut(s)	365
AvaII	GGWCC	1 cut(s)	1046
BanI	GGYRCC	2 cut(s)	193, 238
BanII	GRGCYC	4 cut(s)	86, 158, 730, 810
BauI	CACGAG	1 cut(s)	682
BbrPI	CACGTG	1 cut(s)	1013
BbsI	GAAGAC	1 cut(s)	789
Bbv12I	GWGCWC	1 cut(s)	730
BbvI	GCAGC	4 cut(s)	150, 727, 901, 1140
BccI	CCATC	7 cut(s)	244, 449, 920, 959, 1112, 1142, 1295
BceAI	ACGGC	3 cut(s)	89, 181, 517
BciT130I	CCWGG	3 cut(s)	118, 1103, 1274
BcnI	CCSGG	2 cut(s)	158, 556
BcoDI	GTCTC	1 cut(s)	276
BfaI	CTAG	2 cut(s)	1035, 1083
BfoI	RGCGCY	1 cut(s)	242
BfuAI	ACCTGC	1 cut(s)	876
BglI	GCCNNNNNGGC	1 cut(s)	380
Bme1390I	CCNGG	5 cut(s)	118, 158, 556, 1103, 1274
Bme18I	GGWCC	1 cut(s)	1046
BmeT110I	CYCGRG	1 cut(s)	365
BmgT120I	GGNCC	4 cut(s)	373, 530, 1046, 1205
BmiI	GGNNCC	8 cut(s)	162, 195, 240, 426, 531, 553, 560, 971
BmrFI	CCNGG	5 cut(s)	118, 158, 556, 1103, 1274
BmsI	GCATC	1 cut(s)	13
BpiI	GAAGAC	1 cut(s)	789
BpmI	CTGGAG	1 cut(s)	371
Bpu14I	TTCGAA	1 cut(s)	126
BpuEI	CTTGAG	1 cut(s)	599
BpuMI	CCSGG	2 cut(s)	158, 556
Bsa29I	ATCGAT	1 cut(s)	297
BsaAI	YACGTR	1 cut(s)	1013
BsaHI	GRCGYC	3 cut(s)	102, 185, 239
BsaJI	CCNNGG	3 cut(s)	189, 1102, 1193
BsaWI	WCCGGW	2 cut(s)	37, 1048
BsaXI	ACNNNNNCTCC	4 cut(s)	961, 991, 997, 1027
Bsc4I	CCNNNNNNNGG	5 cut(s)	212, 382, 555, 561, 1108
Bse118I	RCCGGY	2 cut(s)	972, 1207
Bse1I	ACTGG	1 cut(s)	857
BseAI	TCCGGA	1 cut(s)	37
BseBI	CCWGG	3 cut(s)	118, 1103, 1274
BseCI	ATCGAT	1 cut(s)	297
BseDI	CCNNGG	3 cut(s)	189, 1102, 1193
BseGI	GGATG	6 cut(s)	931, 955, 1065, 1123, 1242, 1306
BseLI	CCNNNNNNNGG	5 cut(s)	212, 382, 555, 561, 1108
BseMII	CTCAG	2 cut(s)	143, 644
BseNI	ACTGG	1 cut(s)	857
BseRI	GAGGAG	3 cut(s)	488, 1127, 1310
BseX3I	CGGCCG	1 cut(s)	566
BseXI	GCAGC	4 cut(s)	150, 727, 901, 1140
BseYI	CCCAGC	1 cut(s)	866
Bsh1236I	CGCG	4 cut(s)	182, 223, 396, 990
Bsh1285I	CGRYCG	1 cut(s)	569
BshFI	GGCC	9 cut(s)	333, 374, 499, 532, 568, 769, 930, 1009, 1207
BshNI	GGYRCC	2 cut(s)	193, 238
BshVI	ATCGAT	1 cut(s)	297
BsiEI	CGRYCG	1 cut(s)	569
BsiHKAI	GWGCWC	1 cut(s)	730
BsiHKCI	CYCGRG	1 cut(s)	365
BslI	CCNNNNNNNGG	5 cut(s)	212, 382, 555, 561, 1108
BsmAI	GTCTC	1 cut(s)	276
BsnI	GGCC	9 cut(s)	333, 374, 499, 532, 568, 769, 930, 1009, 1207
BsoBI	CYCGRG	1 cut(s)	365
Bsp119I	TTCGAA	1 cut(s)	126
Bsp1286I	GDGCHC	4 cut(s)	86, 158, 730, 810
Bsp13I	TCCGGA	1 cut(s)	37
Bsp143I	GATC	2 cut(s)	294, 607
BspANI	GGCC	9 cut(s)	333, 374, 499, 532, 568, 769, 930, 1009, 1207
BspCNI	CTCAG	2 cut(s)	144, 645
BspDI	ATCGAT	1 cut(s)	297
BspEI	TCCGGA	1 cut(s)	37
BspFNI	CGCG	4 cut(s)	182, 223, 396, 990
BspLI	GGNNCC	8 cut(s)	162, 195, 240, 426, 531, 553, 560, 971
BspMI	ACCTGC	1 cut(s)	876
BspPI	GGATC	1 cut(s)	615
BspT104I	TTCGAA	1 cut(s)	126
BspT107I	GGYRCC	2 cut(s)	193, 238
BsrFI	RCCGGY	2 cut(s)	972, 1207
BsrI	ACTGG	1 cut(s)	857
BssAI	RCCGGY	2 cut(s)	972, 1207
BssECI	CCNNGG	3 cut(s)	189, 1102, 1193
BssMI	GATC	2 cut(s)	294, 607
BssNI	GRCGYC	3 cut(s)	102, 185, 239
BssSI	CACGAG	1 cut(s)	682
BssT1I	CCWWGG	1 cut(s)	1193
Bst2BI	CACGAG	1 cut(s)	682
Bst2UI	CCWGG	3 cut(s)	118, 1103, 1274
Bst4CI	ACNGT	2 cut(s)	1171, 1259
Bst6I	CTCTTC	3 cut(s)	264, 1061, 1287
BstACI	GRCGYC	3 cut(s)	102, 185, 239
BstBAI	YACGTR	1 cut(s)	1013
BstBI	TTCGAA	1 cut(s)	126
BstC8I	GCNNGC	2 cut(s)	883, 1209
BstDEI	CTNAG	4 cut(s)	152, 653, 689, 762
BstF5I	GGATG	6 cut(s)	931, 955, 1065, 1123, 1242, 1306
BstFNI	CGCG	4 cut(s)	182, 223, 396, 990
BstH2I	RGCGCY	1 cut(s)	242
BstHHI	GCGC	4 cut(s)	241, 396, 494, 990
BstKTI	GATC	2 cut(s)	297, 610
BstMAI	GTCTC	1 cut(s)	276
BstMBI	GATC	2 cut(s)	294, 607
BstMCI	CGRYCG	1 cut(s)	569
BstMWI	GCNNNNNNNGC	9 cut(s)	32, 110, 202, 355, 380, 433, 574, 814, 920
BstNI	CCWGG	3 cut(s)	118, 1103, 1274
BstSCI	CCNGG	5 cut(s)	116, 156, 554, 1101, 1272
BstUI	CGCG	4 cut(s)	182, 223, 396, 990
BstV1I	GCAGC	4 cut(s)	150, 727, 901, 1140
BstV2I	GAAGAC	1 cut(s)	789
BstZI	CGGCCG	1 cut(s)	566
Bsu15I	ATCGAT	1 cut(s)	297
BsuRI	GGCC	9 cut(s)	333, 374, 499, 532, 568, 769, 930, 1009, 1207
BsuTUI	ATCGAT	1 cut(s)	297
BtsCI	GGATG	6 cut(s)	931, 955, 1065, 1123, 1242, 1306
BtsIMutI	CAGTG	1 cut(s)	1264
BveI	ACCTGC	1 cut(s)	876
Cac8I	GCNNGC	2 cut(s)	883, 1209
CfoI	GCGC	4 cut(s)	241, 396, 494, 990
Cfr10I	RCCGGY	2 cut(s)	972, 1207
Cfr13I	GGNCC	4 cut(s)	373, 530, 1046, 1205
ClaI	ATCGAT	1 cut(s)	297
CseI	GACGC	3 cut(s)	110, 174, 702
Csp6I	GTAC	1 cut(s)	889
CviAII	CATG	1 cut(s)	421
CviQI	GTAC	1 cut(s)	889
DdeI	CTNAG	4 cut(s)	152, 653, 689, 762
DinI	GGCGCC	1 cut(s)	240
DpnI	GATC	2 cut(s)	296, 609
DpnII	GATC	2 cut(s)	294, 607
EaeI	YGGCCR	2 cut(s)	566, 928
EagI	CGGCCG	1 cut(s)	566
Eam1104I	CTCTTC	3 cut(s)	264, 1061, 1287
EarI	CTCTTC	3 cut(s)	264, 1061, 1287
EciI	GGCGGA	3 cut(s)	401, 938, 1238
Ecl136II	GAGCTC	1 cut(s)	728
EclXI	CGGCCG	1 cut(s)	566
Eco130I	CCWWGG	1 cut(s)	1193
Eco147I	AGGCCT	1 cut(s)	769
Eco24I	GRGCYC	4 cut(s)	86, 158, 730, 810
Eco47I	GGWCC	1 cut(s)	1046
Eco52I	CGGCCG	1 cut(s)	566
Eco53kI	GAGCTC	1 cut(s)	728
Eco57I	CTGAAG	2 cut(s)	29, 380
Eco72I	CACGTG	1 cut(s)	1013
Eco88I	CYCGRG	1 cut(s)	365
EcoICRI	GAGCTC	1 cut(s)	728
EcoRI	GAATTC	2 cut(s)	340, 448
EcoRII	CCWGG	3 cut(s)	116, 1101, 1272
EcoT14I	CCWWGG	1 cut(s)	1193
EcoT38I	GRGCYC	4 cut(s)	86, 158, 730, 810
EgeI	GGCGCC	1 cut(s)	240
EheI	GGCGCC	1 cut(s)	240
ErhI	CCWWGG	1 cut(s)	1193
FaeI	CATG	1 cut(s)	424
FaiI	YATR	2 cut(s)	422, 521
FatI	CATG	1 cut(s)	420
FokI	GGATG	6 cut(s)	938, 962, 1072, 1130, 1249, 1313
FriOI	GRGCYC	4 cut(s)	86, 158, 730, 810
FspBI	CTAG	2 cut(s)	1035, 1083
GlaI	GCGC	4 cut(s)	240, 395, 493, 989
GsaI	CCCAGC	1 cut(s)	870
GsuI	CTGGAG	1 cut(s)	371
HaeII	RGCGCY	1 cut(s)	242
HaeIII	GGCC	9 cut(s)	333, 374, 499, 532, 568, 769, 930, 1009, 1207
HgaI	GACGC	3 cut(s)	110, 174, 702
HhaI	GCGC	4 cut(s)	241, 396, 494, 990
Hin1I	GRCGYC	3 cut(s)	102, 185, 239
Hin1II	CATG	1 cut(s)	424
Hin6I	GCGC	4 cut(s)	239, 394, 492, 988
HinP1I	GCGC	4 cut(s)	239, 394, 492, 988
HindIII	AAGCTT	4 cut(s)	111, 575, 632, 815
HinfI	GANTC	7 cut(s)	90, 128, 148, 299, 476, 685, 1078
HphI	GGTGA	1 cut(s)	1316
Hpy188III	TCNNGA	9 cut(s)	11, 38, 52, 87, 281, 319, 367, 628, 638
Hpy99I	CGWCG	4 cut(s)	74, 104, 538, 718
HpyAV	CCTTC	7 cut(s)	76, 316, 364, 373, 496, 772, 821
HpyCH4III	ACNGT	2 cut(s)	1171, 1259
HpyCH4IV	ACGT	1 cut(s)	1012
HpyCH4V	TGCA	2 cut(s)	138, 743
HpyF10VI	GCNNNNNNNGC	9 cut(s)	32, 110, 202, 355, 380, 433, 574, 814, 920
HpyF3I	CTNAG	4 cut(s)	152, 653, 689, 762
HpySE526I	ACGT	1 cut(s)	1012
Hsp92I	GRCGYC	3 cut(s)	102, 185, 239
Hsp92II	CATG	1 cut(s)	424
HspAI	GCGC	4 cut(s)	239, 394, 492, 988
KasI	GGCGCC	1 cut(s)	238
Kpn2I	TCCGGA	1 cut(s)	37
KroI	GCCGGC	1 cut(s)	1207
KroNI	GCCGGC	1 cut(s)	1209
Kzo9I	GATC	2 cut(s)	294, 607
LmnI	GCTCC	7 cut(s)	40, 40, 424, 551, 725, 733, 969
Lsp1109I	GCAGC	4 cut(s)	150, 727, 901, 1140
LweI	GCATC	1 cut(s)	13
MaeI	CTAG	2 cut(s)	1035, 1083
MaeII	ACGT	1 cut(s)	1012
MaeIII	GTNAC	1 cut(s)	658
MalI	GATC	2 cut(s)	296, 609
MboI	GATC	2 cut(s)	294, 607
MfeI	CAATTG	2 cut(s)	750, 801
MhlI	GDGCHC	4 cut(s)	86, 158, 730, 810
MluCI	AATT	8 cut(s)	217, 340, 448, 484, 750, 801, 1226, 1277
Mly113I	GGCGCC	1 cut(s)	239
MlyI	GAGTC	2 cut(s)	485, 694
MmeI	TCCRAC	2 cut(s)	516, 1024
MroI	TCCGGA	1 cut(s)	37
MroNI	GCCGGC	1 cut(s)	1207
MroXI	GAANNNNTTC	1 cut(s)	818
MseI	TTAA	6 cut(s)	30, 108, 201, 210, 507, 1182
MspR9I	CCNGG	5 cut(s)	118, 158, 556, 1103, 1274
MunI	CAATTG	2 cut(s)	750, 801
MvaI	CCWGG	3 cut(s)	118, 1103, 1274
MvnI	CGCG	4 cut(s)	182, 223, 396, 990
MwoI	GCNNNNNNNGC	9 cut(s)	32, 110, 202, 355, 380, 433, 574, 814, 920
NaeI	GCCGGC	1 cut(s)	1209
NarI	GGCGCC	1 cut(s)	239
NciI	CCSGG	2 cut(s)	158, 556
NdeII	GATC	2 cut(s)	294, 607
NgoMIV	GCCGGC	1 cut(s)	1207
NlaIII	CATG	1 cut(s)	424
NlaIV	GGNNCC	8 cut(s)	162, 195, 240, 426, 531, 553, 560, 971
NmeAIII	GCCGAG	1 cut(s)	594
NspV	TTCGAA	1 cut(s)	126
PaeR7I	CTCGAG	1 cut(s)	365
PceI	AGGCCT	1 cut(s)	769
PcsI	WCGNNNNNNNCGW	1 cut(s)	66
PdiI	GCCGGC	1 cut(s)	1209
PdmI	GAANNNNTTC	1 cut(s)	818
PfeI	GAWTC	5 cut(s)	90, 128, 148, 299, 1078
PflMI	CCANNNNNTGG	1 cut(s)	1108
PleI	GAGTC	2 cut(s)	484, 693
PluTI	GGCGCC	1 cut(s)	242
PmaCI	CACGTG	1 cut(s)	1013
PmlI	CACGTG	1 cut(s)	1013
PpsI	GAGTC	2 cut(s)	484, 693
Ppu21I	YACGTR	1 cut(s)	1013
Psp124BI	GAGCTC	1 cut(s)	730
Psp6I	CCWGG	3 cut(s)	116, 1101, 1272
PspCI	CACGTG	1 cut(s)	1013
PspFI	CCCAGC	1 cut(s)	866
PspGI	CCWGG	3 cut(s)	116, 1101, 1272
PspN4I	GGNNCC	8 cut(s)	162, 195, 240, 426, 531, 553, 560, 971
PspPI	GGNCC	4 cut(s)	373, 530, 1046, 1205
RsaI	GTAC	1 cut(s)	890
RsaNI	GTAC	1 cut(s)	889
SacI	GAGCTC	1 cut(s)	730
SaqAI	TTAA	6 cut(s)	30, 108, 201, 210, 507, 1182
Sau3AI	GATC	2 cut(s)	294, 607
Sau96I	GGNCC	4 cut(s)	373, 530, 1046, 1205
SchI	GAGTC	2 cut(s)	485, 694
ScrFI	CCNGG	5 cut(s)	118, 158, 556, 1103, 1274
SduI	GDGCHC	4 cut(s)	86, 158, 730, 810
SfaNI	GCATC	1 cut(s)	13
SfoI	GGCGCC	1 cut(s)	240
Sfr274I	CTCGAG	1 cut(s)	365
SfuI	TTCGAA	1 cut(s)	126
SinI	GGWCC	1 cut(s)	1046
SlaI	CTCGAG	1 cut(s)	365
SmlI	CTYRAG	2 cut(s)	365, 578
SmoI	CTYRAG	2 cut(s)	365, 578
Sse9I	AATT	8 cut(s)	217, 340, 448, 484, 750, 801, 1226, 1277
SseBI	AGGCCT	1 cut(s)	769
SspDI	GGCGCC	1 cut(s)	238
SspMI	CTAG	2 cut(s)	1035, 1083
SstI	GAGCTC	1 cut(s)	730
StuI	AGGCCT	1 cut(s)	769
StyD4I	CCNGG	5 cut(s)	116, 156, 554, 1101, 1272
StyI	CCWWGG	1 cut(s)	1193
TaaI	ACNGT	2 cut(s)	1171, 1259
TaiI	ACGT	1 cut(s)	1015
TasI	AATT	8 cut(s)	217, 340, 448, 484, 750, 801, 1226, 1277
TfiI	GAWTC	5 cut(s)	90, 128, 148, 299, 1078
Tru1I	TTAA	6 cut(s)	30, 108, 201, 210, 507, 1182
Tru9I	TTAA	6 cut(s)	30, 108, 201, 210, 507, 1182
TscAI	CASTG	1 cut(s)	1264
TseI	GCWGC	4 cut(s)	138, 740, 914, 1153
TspDTI	ATGAA	4 cut(s)	409, 663, 1076, 1253
TspRI	CASTG	1 cut(s)	1264
Van91I	CCANNNNNTGG	1 cut(s)	1108
VpaK11BI	GGWCC	1 cut(s)	1046
XapI	RAATTY	4 cut(s)	217, 340, 448, 484
XhoI	CTCGAG	1 cut(s)	365
XmnI	GAANNNNTTC	1 cut(s)	818
XspI	CTAG	2 cut(s)	1035, 1083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.