Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0002428

Physical Location & Seq

Genomic Coordinates Forward (+)

30724792 .. 30729582

Gene Structure 4791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1253600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGCAACTACAAGTTGCTCCGTCCAGCAGCAATCAGTTTCACATGTACCCAGATTCTGGAGAACCAGAGCTATGGAGGTTTGGAAATTTCAGTGAGGAAAGCATATCCTCTTGGCCTTCAACTGCTTCCAGGTTTAATATTGAACACGAAGAAAATTGCAAGAGCTTAAGAACTGAAGAACTGTCAGGAAGCGTCATTAATTCCTCCATGCAACAGAATATTTTGTGGAGTTCTCAAGAAAAACCAACAAAGGACCTGTATCCATCTTTGAAAGAGCACTCGACAGACCAGCAAGGGTATTCTGAATTAATGTCAAGCATGGGAGATAATCAACCTTCCCACTACAGTCACCAATGTGAGGGAAACCTAACCTTCAAATCAGAAAATACATCAGTCACAGAGCCTGTAAAACATACTGAACCACTTTTGCGAAATAAGACTGGTAGCATGCAGCATGTCCAAAATGTACAAAAACTCCAAAAGGAAGAAAAGGAAAGTAGAAAAACTCCAAACGAAAAAAAAGGAAAGGCTGAGGGCGAGAAAAAGAATGCAGTTGACTGGGACATTTTGAGAAAGCAGGCACAAGCCAATGGTAGGAAAACAGAAAGAAATAGAGGTACAATGGACTCTGTGCACTATGAAGCACTCATAAATGCTAATGTCAAAGAAATATCTGATGCAATCAAGGAGCGAGGGATGAACAACTTGCTAGCAGAACGAAAGCAGGAATTCCTAAAGCGACTGGTTAGAGAACATGAAAGCATCGATCTGGAATGGTTAAGAGATGTTCCCCCTGATAAAGCAAAGGATTATCTATTAAGCATACGGGGATTGGGCTTGAAAAGTGTGGAGTGTATCCGGCTTTTAACACTTCACCACCTTGCTTTCCCGGTTGACACAAATGTTGGAAGGATAGCAGTAAGACTGGGATGGGTCCCCCTCCAACCATTACCTGAATCACTGCAGTTACACCTCTTAGAACTGTACCCAATGCTGGAGTCGATTCAAAAGTATTTATGGCCAAGATTATGCAAACTTGATCAACTAACCTTTTACGAGCTGCACTACCAGATGATTACATTTGGAAAGGTATTTTGTACAAAGAGTAAACCGAATTGCAATGCATGTCCAATGAGAGGAGAATGTAGACACTTCGCAAGTGCTTGTGCAAGTGCAAGACTTGCCCTGCCAGGGCCAGAAGAGAAGAGAATTGTCAGTTCAAATGTTTCCATTGAAGCCGAGATAAATCCCGCAATAGCTGTCACTCCTATGTCACTGCCTCCACCTGAGAACAACTCACTCCAGATAGCAGGTACTGTAATTAAAGAGTGTGAACCAATAATCGAAGAGCCAGCAACGCCAGAACAAGAGTTGACTGAGCTATCGGAAAGTGAAATTGAGGACTTCTTCTATGAAGATCCTGATCAGATTCCTACCACCAAACTCAACATGGAAGCGTTCACATCAACATTACAAAACTATATGCAAGAGAAGAAGCTCCAAGAAGGTGACATGTCCAAAGCCTTAGTTGCCTTGAATTCAGAAGCTACTTCTATCCCTACGCCCAAGTTGAAGAATGTCAGTAGACTACGAACAGAGCACCAAGTGTATGAACTACCTGATTCGCATCCACTCTTGGAAGGGATGGATAGACGGGAACCAGATGATCCAAGCTCATACCTTCTAGCTATATGGACACCAGGGGAAACTGCAAATTCAATTCAACAACCAGAAAGCAGGTGTGGCTTCCAAGATCAAAACAAATTGTGCAATGAGAAGACATGCTTTTCATGCAATAGTATAAGAGAAGAAAATTTGCAAACAGTCAGAGGGACGATTTTGATACCTTGTAGAACAGCAATGAGAGGGAGCTTCCCCCTCAATGGCACATGCTTTCAAGTTAACGAGATGTTCGCAGATCATGAATCTAGTCATAACCCAATTGATGTTCCAAGGGGGTGGATATGGAATTTGCCAAGACGGACTGTATACTTTGGAACTTCAGTATCAACAATTTTCAAAGGTCTATCAACAGAGGGAATTCAATACTGCTTTTGGAGAGGATATGTTTGTGTGAGGGGATTCGAAAGGAAAACAAGAGCACCACGGCCCTTAATGGCCAGATTGCACTTCCCAGCGAGTAAGATGACCAAGACAAAAAATGAAGAGAAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003906 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006349 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010468 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0019222 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0034641 GO:0040029 GO:0043076 GO:0043078 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Perm-CXXC RRM_DME

Protein Analysis

726

Amino Acids

82.7

Weight (kDa)

6.16

Isoelectric Point (pI)

52.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Perm-CXXC	PF15629	577 - 608	3.1e-13	Permuted single zf-CXXC unit
RRM_DME	PF15628	611 - 711	3.3e-52	RRM in Demeter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04560 AT5G04560 AT5G04560
fragaria_vesca	FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170
malus_domestica	MD02G1245300.v1.1 MD07G1071800.v1.1 MD09G1259000.v1.1 MD09G1259100.v1.1 MD17G1253500.v1.1 MD17G1253600.v1.1
prunus_persica	Prupe.2G089400_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1
pyrus_communis	pycom02g21110 pycom09g17380 pycom17g25620 pycom17g25630
rosa_chinensis	RchiOBHm_Chr6g0267351 RchiOBHm_Chr6g0267361
rosa_laevigata	RLG00000014013
rosa_multiflora	Rmu_sc0000746.1_g000002 Rmu_sc0019664.1_g000001
rosa_roxburghii	Rroxscaffold_7G00200830
rosa_rugosa	Rorug06G0031600 Rorug06G0031700 Rorug06G0031800 Rorug06G0031900 Rorug06G0032000
rosa_samantha	Rh6AG153500 Rh6BG153200 Rh6CG149300 Rh6DG137600
rosa_wichuraiana	Rw6G013200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1728
Acc36I	ACCTGC	2 cut(s)	1301, 1728
AccB7I	CCANNNNNTGG	1 cut(s)	56
AccI	GTMKAC	3 cut(s)	1147, 1585, 1989
AciI	CCGC	1 cut(s)	1251
AclWI	GGATC	2 cut(s)	1412, 1661
AcoI	YGGCCR	2 cut(s)	1019, 2118
AcsI	RAATTY	7 cut(s)	85, 728, 1537, 1714, 1813, 1969, 2040
AcuI	CTGAAG	2 cut(s)	195, 1986
AdeI	CACNNNGTG	1 cut(s)	1606
AfaI	GTAC	6 cut(s)	47, 468, 619, 986, 1099, 1315
AfiI	CCNNNNNNNGG	7 cut(s)	56, 358, 594, 994, 1136, 1191, 1883
AflII	CTTAAG	1 cut(s)	166
AflIII	ACRYGT	2 cut(s)	42, 1512
AjnI	CCWGG	3 cut(s)	128, 1189, 1699
AleI	CACNNNNGTG	1 cut(s)	354
Alw21I	GWGCWC	4 cut(s)	279, 636, 1602, 2104
Alw44I	GTGCAC	1 cut(s)	632
AlwI	GGATC	2 cut(s)	1412, 1661
AlwNI	CAGNNNCTG	3 cut(s)	56, 404, 1316
AoxI	GGCC	5 cut(s)	113, 1019, 1193, 2108, 2118
ApaLI	GTGCAC	1 cut(s)	632
ApeKI	GCWGC	3 cut(s)	27, 451, 1060
ApoI	RAATTY	7 cut(s)	85, 728, 1537, 1714, 1813, 1969, 2040
AseI	ATTAAT	2 cut(s)	198, 308
AspS9I	GGNCC	4 cut(s)	253, 934, 1193, 2109
AsuC2I	CCSGG	1 cut(s)	890
AsuHPI	GGTGA	3 cut(s)	341, 866, 1520
AsuII	TTCGAA	1 cut(s)	2085
AsuNHI	GCTAGC	1 cut(s)	709
AvaII	GGWCC	2 cut(s)	253, 934
BaeGI	GKGCMC	1 cut(s)	636
BaeI	ACNNNNGTAYC	2 cut(s)	1989, 2022
BalI	TGGCCA	2 cut(s)	1021, 2120
BbsI	GAAGAC	1 cut(s)	1784
Bbv12I	GWGCWC	4 cut(s)	279, 636, 1602, 2104
BbvCI	CCTCAGC	1 cut(s)	531
BbvI	GCAGC	3 cut(s)	39, 463, 1047
BccI	CCATC	3 cut(s)	271, 924, 1639
BceAI	ACGGC	1 cut(s)	2123
BciT130I	CCWGG	3 cut(s)	130, 1191, 1701
BciVI	GTATCC	2 cut(s)	270, 866
BclI	TGATCA	2 cut(s)	1039, 1423
BcnI	CCSGG	1 cut(s)	890
BfaI	CTAG	3 cut(s)	710, 1685, 1929
BfmI	CTRYAG	2 cut(s)	343, 962
BfrI	CTTAAG	1 cut(s)	166
BfuAI	ACCTGC	2 cut(s)	1301, 1728
BfuI	GTATCC	2 cut(s)	270, 866
BisI	GCNGC	3 cut(s)	28, 452, 1061
BlsI	GCNGC	3 cut(s)	29, 453, 1062
Bme1390I	CCNGG	4 cut(s)	130, 890, 1191, 1701
Bme18I	GGWCC	2 cut(s)	253, 934
BmgT120I	GGNCC	4 cut(s)	253, 934, 1193, 2109
BmiI	GGNNCC	3 cut(s)	935, 936, 1659
BmrFI	CCNGG	4 cut(s)	130, 890, 1191, 1701
BmrI	ACTGGG	2 cut(s)	568, 935
BmsI	GCATC	3 cut(s)	667, 771, 1636
BmtI	GCTAGC	1 cut(s)	713
BmuI	ACTGGG	2 cut(s)	568, 935
BpiI	GAAGAC	1 cut(s)	1784
BplI	GAGNNNNNCTC	2 cut(s)	1280, 1312
BpmI	CTGGAG	3 cut(s)	78, 1016, 1286
Bpu10I	CCTNAGC	1 cut(s)	531
Bpu14I	TTCGAA	1 cut(s)	2085
BpuEI	CTTGAG	1 cut(s)	219
BpuMI	CCSGG	1 cut(s)	890
Bsa29I	ATCGAT	1 cut(s)	765
BsaBI	GATNNNNATC	2 cut(s)	1422, 1626
BsaJI	CCNNGG	4 cut(s)	1190, 1700, 1952, 2105
BsaXI	ACNNNNNCTCC	2 cut(s)	459, 489
Bsc4I	CCNNNNNNNGG	7 cut(s)	56, 358, 594, 994, 1136, 1191, 1883
Bse1I	ACTGG	4 cut(s)	445, 563, 747, 930
Bse3DI	GCAATG	3 cut(s)	1126, 1777, 1866
Bse8I	GATNNNNATC	2 cut(s)	1422, 1626
BseBI	CCWGG	3 cut(s)	130, 1191, 1701
BseCI	ATCGAT	1 cut(s)	765
BseDI	CCNNGG	4 cut(s)	1190, 1700, 1952, 2105
BseGI	GGATG	4 cut(s)	702, 935, 1627, 1650
BseJI	GATNNNNATC	2 cut(s)	1422, 1626
BseLI	CCNNNNNNNGG	7 cut(s)	56, 358, 594, 994, 1136, 1191, 1883
BseMI	GCAATG	3 cut(s)	1126, 1777, 1866
BseMII	CTCAG	3 cut(s)	522, 1278, 1368
BseNI	ACTGG	4 cut(s)	445, 563, 747, 930
BseRI	GAGGAG	1 cut(s)	1152
BseSI	GKGCMC	1 cut(s)	636
BseXI	GCAGC	3 cut(s)	39, 463, 1047
BseYI	CCCAGC	1 cut(s)	2134
BsgI	GTGCAG	1 cut(s)	1046
BshFI	GGCC	5 cut(s)	115, 1021, 1195, 2110, 2120
BshVI	ATCGAT	1 cut(s)	765
BsiHKAI	GWGCWC	4 cut(s)	279, 636, 1602, 2104
BsiSI	CCGG	2 cut(s)	859, 890
BslFI	GGGAC	3 cut(s)	575, 920, 1846
BslI	CCNNNNNNNGG	7 cut(s)	56, 358, 594, 994, 1136, 1191, 1883
BsmFI	GGGAC	3 cut(s)	575, 920, 1846
BsmI	GAATGC	1 cut(s)	553
BsnI	GGCC	5 cut(s)	115, 1021, 1195, 2110, 2120
Bsp119I	TTCGAA	1 cut(s)	2085
Bsp1286I	GDGCHC	4 cut(s)	279, 636, 1602, 2104
Bsp1407I	TGTACA	2 cut(s)	466, 1097
Bsp143I	GATC	7 cut(s)	766, 1039, 1417, 1423, 1666, 1753, 1918
BspACI	CCGC	1 cut(s)	1251
BspANI	GGCC	5 cut(s)	115, 1021, 1195, 2110, 2120
BspCNI	CTCAG	3 cut(s)	523, 1279, 1369
BspDI	ATCGAT	1 cut(s)	765
BspHI	TCATGA	1 cut(s)	1921
BspLI	GGNNCC	3 cut(s)	935, 936, 1659
BspMAI	CTGCAG	1 cut(s)	966
BspMI	ACCTGC	2 cut(s)	1301, 1728
BspOI	GCTAGC	1 cut(s)	713
BspPI	GGATC	2 cut(s)	1412, 1661
BspQI	GCTCTTC	1 cut(s)	1341
BspT104I	TTCGAA	1 cut(s)	2085
BspTI	CTTAAG	1 cut(s)	166
BsrDI	GCAATG	3 cut(s)	1126, 1777, 1866
BsrGI	TGTACA	2 cut(s)	466, 1097
BsrI	ACTGG	4 cut(s)	445, 563, 747, 930
BssECI	CCNNGG	4 cut(s)	1190, 1700, 1952, 2105
BssMI	GATC	7 cut(s)	766, 1039, 1417, 1423, 1666, 1753, 1918
BssNAI	GTATAC	1 cut(s)	1990
BssT1I	CCWWGG	1 cut(s)	1952
Bst1107I	GTATAC	1 cut(s)	1990
Bst2UI	CCWGG	3 cut(s)	130, 1191, 1701
Bst4CI	ACNGT	6 cut(s)	183, 347, 984, 1318, 1825, 1987
Bst6I	CTCTTC	4 cut(s)	1194, 1199, 1341, 2160
BstAFI	CTTAAG	1 cut(s)	166
BstAPI	GCANNNNNTGC	1 cut(s)	1181
BstAUI	TGTACA	2 cut(s)	466, 1097
BstBI	TTCGAA	1 cut(s)	2085
BstC8I	GCNNGC	4 cut(s)	449, 579, 711, 1353
BstDEI	CTNAG	5 cut(s)	531, 976, 1287, 1377, 1525
BstDSI	CCRYGG	1 cut(s)	2105
BstF5I	GGATG	4 cut(s)	702, 935, 1627, 1650
BstKTI	GATC	7 cut(s)	769, 1042, 1420, 1426, 1669, 1756, 1921
BstMBI	GATC	7 cut(s)	766, 1039, 1417, 1423, 1666, 1753, 1918
BstMWI	GCNNNNNNNGC	5 cut(s)	1181, 1357, 1529, 1743, 1791
BstNI	CCWGG	3 cut(s)	130, 1191, 1701
BstNSI	RCATGY	7 cut(s)	46, 451, 458, 1128, 1516, 1785, 1893
BstSCI	CCNGG	4 cut(s)	128, 888, 1189, 1699
BstSFI	CTRYAG	2 cut(s)	343, 962
BstSLI	GKGCMC	1 cut(s)	636
BstV1I	GCAGC	3 cut(s)	39, 463, 1047
BstV2I	GAAGAC	1 cut(s)	1784
BstX2I	RGATCY	1 cut(s)	1417
BstXI	CCANNNNNNTGG	2 cut(s)	72, 1959
BstYI	RGATCY	1 cut(s)	1417
BstZ17I	GTATAC	1 cut(s)	1990
Bsu15I	ATCGAT	1 cut(s)	765
BsuI	GTATCC	2 cut(s)	270, 866
BsuRI	GGCC	5 cut(s)	115, 1021, 1195, 2110, 2120
BsuTUI	ATCGAT	1 cut(s)	765
BtgI	CCRYGG	1 cut(s)	2105
BtsCI	GGATG	4 cut(s)	702, 935, 1627, 1650
BtsI	GCAGTG	2 cut(s)	959, 1274
BtsIMutI	CAGTG	3 cut(s)	97, 959, 1274
BveI	ACCTGC	2 cut(s)	1301, 1728
Cac8I	GCNNGC	4 cut(s)	449, 579, 711, 1353
CaiI	CAGNNNCTG	3 cut(s)	56, 404, 1316
CciI	TCATGA	1 cut(s)	1921
Cfr13I	GGNCC	4 cut(s)	253, 934, 1193, 2109
ClaI	ATCGAT	1 cut(s)	765
CseI	GACGC	1 cut(s)	181
Csp6I	GTAC	6 cut(s)	46, 467, 618, 985, 1098, 1314
CviQI	GTAC	6 cut(s)	46, 467, 618, 985, 1098, 1314
DdeI	CTNAG	5 cut(s)	531, 976, 1287, 1377, 1525
DpnI	GATC	7 cut(s)	768, 1041, 1419, 1425, 1668, 1755, 1920
DpnII	GATC	7 cut(s)	766, 1039, 1417, 1423, 1666, 1753, 1918
DraIII	CACNNNGTG	1 cut(s)	1606
EaeI	YGGCCR	2 cut(s)	1019, 2118
Eam1104I	CTCTTC	4 cut(s)	1194, 1199, 1341, 2160
EarI	CTCTTC	4 cut(s)	1194, 1199, 1341, 2160
Eco130I	CCWWGG	1 cut(s)	1952
Eco47I	GGWCC	2 cut(s)	253, 934
Eco57I	CTGAAG	2 cut(s)	195, 1986
EcoO109I	RGGNCCY	2 cut(s)	253, 934
EcoRI	GAATTC	3 cut(s)	728, 1537, 2040
EcoRII	CCWGG	3 cut(s)	128, 1189, 1699
EcoT14I	CCWWGG	1 cut(s)	1952
EcoT22I	ATGCAT	1 cut(s)	1126
ErhI	CCWWGG	1 cut(s)	1952
FalI	AAGNNNNNCTT	2 cut(s)	1769, 1801
FaqI	GGGAC	3 cut(s)	575, 920, 1846
FauI	CCCGC	1 cut(s)	1258
FbaI	TGATCA	2 cut(s)	1039, 1423
FblI	GTMKAC	3 cut(s)	1147, 1585, 1989
Fnu4HI	GCNGC	3 cut(s)	28, 452, 1061
FokI	GGATG	4 cut(s)	709, 942, 1614, 1657
Fsp4HI	GCNGC	3 cut(s)	28, 452, 1061
FspBI	CTAG	3 cut(s)	710, 1685, 1929
GluI	GCNGC	3 cut(s)	28, 452, 1061
GsaI	CCCAGC	1 cut(s)	2138
GsuI	CTGGAG	3 cut(s)	78, 1016, 1286
HaeIII	GGCC	5 cut(s)	115, 1021, 1195, 2110, 2120
HapII	CCGG	2 cut(s)	859, 890
HgaI	GACGC	1 cut(s)	181
HincII	GTYRAC	4 cut(s)	556, 895, 1374, 1903
HindII	GTYRAC	4 cut(s)	556, 895, 1374, 1903
HinfI	GANTC	9 cut(s)	53, 626, 956, 998, 1003, 1429, 1622, 1925, 2082
HpaI	GTTAAC	1 cut(s)	1903
HpaII	CCGG	2 cut(s)	859, 890
HphI	GGTGA	3 cut(s)	341, 866, 1520
Hpy188I	TCNGA	7 cut(s)	304, 382, 676, 1387, 1428, 1543, 1829
Hpy188III	TCNNGA	7 cut(s)	57, 186, 236, 770, 1303, 1421, 1922
HpyAV	CCTTC	7 cut(s)	126, 345, 382, 903, 1499, 1634, 1691
HpyCH4III	ACNGT	6 cut(s)	183, 347, 984, 1318, 1825, 1987
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1181, 1357, 1529, 1743, 1791
HpyF3I	CTNAG	5 cut(s)	531, 976, 1287, 1377, 1525
KflI	GGGWCCC	1 cut(s)	934
Ksp22I	TGATCA	2 cut(s)	1039, 1423
KspAI	GTTAAC	1 cut(s)	1903
Kzo9I	GATC	7 cut(s)	766, 1039, 1417, 1423, 1666, 1753, 1918
LguI	GCTCTTC	1 cut(s)	1341
LmnI	GCTCC	4 cut(s)	22, 688, 1503, 1869
Lsp1109I	GCAGC	3 cut(s)	39, 463, 1047
LweI	GCATC	3 cut(s)	667, 771, 1636
MaeI	CTAG	3 cut(s)	710, 1685, 1929
MaeIII	GTNAC	6 cut(s)	347, 394, 966, 1261, 1272, 1508
MalI	GATC	7 cut(s)	768, 1041, 1419, 1425, 1668, 1755, 1920
MboI	GATC	7 cut(s)	766, 1039, 1417, 1423, 1666, 1753, 1918
MfeI	CAATTG	1 cut(s)	1941
MflI	RGATCY	1 cut(s)	1417
MhlI	GDGCHC	4 cut(s)	279, 636, 1602, 2104
MlsI	TGGCCA	2 cut(s)	1021, 2120
MluNI	TGGCCA	2 cut(s)	1021, 2120
MlyI	GAGTC	2 cut(s)	620, 1007
MmeI	TCCRAC	2 cut(s)	886, 967
Mox20I	TGGCCA	2 cut(s)	1021, 2120
Mph1103I	ATGCAT	1 cut(s)	1126
MscI	TGGCCA	2 cut(s)	1021, 2120
MslI	CAYNNNNRTG	2 cut(s)	354, 1268
Msp20I	TGGCCA	2 cut(s)	1021, 2120
MspCI	CTTAAG	1 cut(s)	166
MspI	CCGG	2 cut(s)	859, 890
MspR9I	CCNGG	4 cut(s)	130, 890, 1191, 1701
MunI	CAATTG	1 cut(s)	1941
Mva1269I	GAATGC	1 cut(s)	553
MvaI	CCWGG	3 cut(s)	130, 1191, 1701
MwoI	GCNNNNNNNGC	5 cut(s)	1181, 1357, 1529, 1743, 1791
NciI	CCSGG	1 cut(s)	890
NdeII	GATC	7 cut(s)	766, 1039, 1417, 1423, 1666, 1753, 1918
NheI	GCTAGC	1 cut(s)	709
NlaIV	GGNNCC	3 cut(s)	935, 936, 1659
NmeAIII	GCCGAG	1 cut(s)	1264
NmuCI	GTSAC	5 cut(s)	347, 394, 1261, 1272, 1508
NsiI	ATGCAT	1 cut(s)	1126
NspI	RCATGY	7 cut(s)	46, 451, 458, 1128, 1516, 1785, 1893
NspV	TTCGAA	1 cut(s)	2085
OliI	CACNNNNGTG	1 cut(s)	354
PaeI	GCATGC	1 cut(s)	451
PagI	TCATGA	1 cut(s)	1921
PaqCI	CACCTGC	1 cut(s)	1728
PciI	ACATGT	2 cut(s)	42, 1512
PciSI	GCTCTTC	1 cut(s)	1341
PctI	GAATGC	1 cut(s)	553
PfeI	GAWTC	7 cut(s)	53, 956, 1003, 1429, 1622, 1925, 2082
PflMI	CCANNNNNTGG	1 cut(s)	56
PkrI	GCNGC	3 cut(s)	29, 453, 1062
PleI	GAGTC	2 cut(s)	620, 1006
PpsI	GAGTC	2 cut(s)	620, 1006
PpuMI	RGGWCCY	2 cut(s)	253, 934
PscI	ACATGT	2 cut(s)	42, 1512
PshBI	ATTAAT	2 cut(s)	198, 308
Psp5II	RGGWCCY	2 cut(s)	253, 934
Psp6I	CCWGG	3 cut(s)	128, 1189, 1699
PspFI	CCCAGC	1 cut(s)	2134
PspGI	CCWGG	3 cut(s)	128, 1189, 1699
PspN4I	GGNNCC	3 cut(s)	935, 936, 1659
PspPI	GGNCC	4 cut(s)	253, 934, 1193, 2109
PspPPI	RGGWCCY	2 cut(s)	253, 934
PstI	CTGCAG	1 cut(s)	966
PstNI	CAGNNNCTG	3 cut(s)	56, 404, 1316
PsuI	RGATCY	1 cut(s)	1417
RsaI	GTAC	6 cut(s)	47, 468, 619, 986, 1099, 1315
RsaNI	GTAC	6 cut(s)	46, 467, 618, 985, 1098, 1314
RseI	CAYNNNNRTG	2 cut(s)	354, 1268
SapI	GCTCTTC	1 cut(s)	1341
SatI	GCNGC	3 cut(s)	28, 452, 1061
Sau3AI	GATC	7 cut(s)	766, 1039, 1417, 1423, 1666, 1753, 1918
Sau96I	GGNCC	4 cut(s)	253, 934, 1193, 2109
SchI	GAGTC	2 cut(s)	620, 1007
ScrFI	CCNGG	4 cut(s)	130, 890, 1191, 1701
SduI	GDGCHC	4 cut(s)	279, 636, 1602, 2104
SfaNI	GCATC	3 cut(s)	667, 771, 1636
SfcI	CTRYAG	2 cut(s)	343, 962
SfuI	TTCGAA	1 cut(s)	2085
SinI	GGWCC	2 cut(s)	253, 934
SmiMI	CAYNNNNRTG	2 cut(s)	354, 1268
SmlI	CTYRAG	2 cut(s)	166, 234
SmoI	CTYRAG	2 cut(s)	166, 234
SphI	GCATGC	1 cut(s)	451
SsiI	CCGC	1 cut(s)	1251
SspI	AATATT	2 cut(s)	139, 220
SspMI	CTAG	3 cut(s)	710, 1685, 1929
StyD4I	CCNGG	4 cut(s)	128, 888, 1189, 1699
StyI	CCWWGG	1 cut(s)	1952
TaaI	ACNGT	6 cut(s)	183, 347, 984, 1318, 1825, 1987
TaqI	TCGA	5 cut(s)	281, 765, 1001, 1344, 2085
TatI	WGTACW	2 cut(s)	466, 1097
TfiI	GAWTC	7 cut(s)	53, 956, 1003, 1429, 1622, 1925, 2082
TscAI	CASTG	3 cut(s)	97, 966, 1281
TseFI	GTSAC	5 cut(s)	347, 394, 1261, 1272, 1508
TseI	GCWGC	3 cut(s)	27, 451, 1060
Tsp45I	GTSAC	5 cut(s)	347, 394, 1261, 1272, 1508
TspDTI	ATGAA	8 cut(s)	654, 713, 771, 1428, 1626, 1779, 1938, 2178
TspGWI	ACGGA	2 cut(s)	9, 1996
TspRI	CASTG	3 cut(s)	97, 966, 1281
Van91I	CCANNNNNTGG	1 cut(s)	56
Vha464I	CTTAAG	1 cut(s)	166
VneI	GTGCAC	1 cut(s)	632
VpaK11BI	GGWCC	2 cut(s)	253, 934
VspI	ATTAAT	2 cut(s)	198, 308
XapI	RAATTY	7 cut(s)	85, 728, 1537, 1714, 1813, 1969, 2040
XceI	RCATGY	7 cut(s)	46, 451, 458, 1128, 1516, 1785, 1893
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1447
XmiI	GTMKAC	3 cut(s)	1147, 1585, 1989
XspI	CTAG	3 cut(s)	710, 1685, 1929
Zsp2I	ATGCAT	1 cut(s)	1126

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.