Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002428

Physical Location & Seq

Genomic Coordinates Forward (+)

3792243 .. 3794952

Gene Structure 2710 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0031700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGTTTCTTACGAGTATGTTTTGGCTGGGGTGTTGGTTTCTTTGCTGGGCTCTATTTTCTTCATGATCATCAGCTCTACTTTGGGGGGAAAGAAACAATTCAAGGCTTCAGGTGCAGTAAAGAGTAATGGATTCGGAAACGGTGAGTTTCTGCCGGAAATGGAGGAGGAGAAAAGTACCGATGTCGTCATTGTCGGCGCCGGAGTTGCTGGTGCAGCTCTTGCTTACACTCTTGCCAAGGAAGGACGGCGTGTACATGTAATTGAAAGAGACTTGAGTGAGCCAGACAGAATTGTTGGGGAGCTGTTGCAGCCTGGGGGATATCTCAAATTGATTGAGTTGGGTCTTGAAGATTGTGCAAATGAATCGATTGATGCCCAGAAAGTGTTTGGTTATGCTCTTTACAAAGATGGGAAGGATACAACACTGTCTTATCCCTTGGAGAAATACAGTTCAGATGTGGCCGGGAGAAGTTTCCACAATGGGCGTTTCATTCAAAGAATGCGTGAAAAAGCTACCACTCTTTCAAATGTGAAAATGGAACAAGGATCAGTGACAACACTAATAGAGGAAAAGGGTATTGTCAAAGGGGTGATTTACAAGAACAAGGCTGGAGAGGAGATGAGAACATATGCTCCACTAACAATCGTGTGCGACGGCTGCTTTTCAAATTTGCGCAAATCTCTTAGTGCTCCAAAGGTTGAAAGTCCCTCTTGTTTTGTTGGTTTGATCTTGGAGGACTGTGAGCTTCCACACGCAAATCATGGGCATGTCATTCTGGGAGACCCTTCACCCATCCTGTTCTATCCCATCAGTTCCACCGAGGTTCGCTGTTTGGTAGATGTGCCAGGAACAAAAGTACCTTCAGTAGCTAGTGGTGAAATGGGCAACTATTTGAAAACTGTGGTAGCGCCTCAGGTTCCCCCACAACTGTACAATGCTTTTATGGCCGCTGTCAACAAGGGAAACATCAGATCCATGCAAAACAGAAGCATGGCTGCTAATCCTGTTCCCAGTCCTGGTGCAATTTTGTTGGGGGATTCATTCAACATGAGGCATCCTTTCACAGGAGGAGGAATGACCGTGGCTCTTTCAGACATTGTTCTTCTCCGGGATCTTCTTAGACCCCTACGTAATCTCAATGATGCACCTGCTTTGTGCAATTACCTTGAATCATTTTACACACTGCGTAAGCCTGTGTCATCTACCATAAACACATTGGCAGGTGCATTGTACAAGGTGTTTTGTGCATCACCTGATCCAGCAAGACAGGAAATGCGTGAAGCCTGTTTTGGCTATTTGAGCCTTGGAGGCATCTGCTCATATGGACCAGTATCTCTTCTCTCTGGTCTTAACCCTCGTCCATTACATTTGTTTCTCCATTTCTTTGCTGTTGCCATCTATGGTGTTGGCCGCTTAATGCTTCCGTTCCCTTCACCTAAACGCATGTGGCTTGGTTTTCGATTGATCTTGAGTGCATCAGGCATCATATTCCCGATTATAAAGGGTGAAGGAATTAGACAGATGTTCTTTCCTGCCACAATACCAGCATATTACAGATCTCCTCCTGTTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003906 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006349 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010468 GO:0016787 GO:0016798 GO:0016799 GO:0019104 GO:0019222 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0034641 GO:0040029 GO:0043076 GO:0043078 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Perm-CXXC RRM_DME

Protein Analysis

525

Amino Acids

57.09

Weight (kDa)

8.64

Isoelectric Point (pI)

47.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	60 - 371	1.9e-17	FAD binding domain
DAO	PF01266	61 - 91	4.8e-08	FAD dependent oxidoreductase
FAD_binding_2	PF00890	61 - 90	1e-05	FAD binding domain
NAD_binding_8	PF13450	64 - 90	2e-06	NAD(P)-binding Rossmann-like domain
SE	PF08491	212 - 484	2.4e-116	Squalene epoxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04560 AT5G04560 AT5G04560
fragaria_vesca	FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170
malus_domestica	MD02G1245300.v1.1 MD07G1071800.v1.1 MD09G1259000.v1.1 MD09G1259100.v1.1 MD17G1253500.v1.1 MD17G1253600.v1.1
prunus_persica	Prupe.2G089400_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1
pyrus_communis	pycom02g21110 pycom09g17380 pycom17g25620 pycom17g25630
rosa_chinensis	RchiOBHm_Chr6g0267351 RchiOBHm_Chr6g0267361
rosa_laevigata	RLG00000014013
rosa_multiflora	Rmu_sc0000746.1_g000002 Rmu_sc0019664.1_g000001
rosa_roxburghii	Rroxscaffold_7G00200830
rosa_rugosa	Rorug06G0031600 Rorug06G0031700 Rorug06G0031800 Rorug06G0031900 Rorug06G0032000
rosa_samantha	Rh6AG153500 Rh6BG153200 Rh6CG149300 Rh6DG137600
rosa_wichuraiana	Rw6G013200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1502
AarI	CACCTGC	2 cut(s)	1159, 1214
Acc16I	TGCGCA	1 cut(s)	677
Acc36I	ACCTGC	2 cut(s)	1159, 1214
AccB1I	GGYRCC	1 cut(s)	197
AciI	CCGC	2 cut(s)	951, 1414
AclWI	GGATC	4 cut(s)	556, 969, 1122, 1253
AcoI	YGGCCR	3 cut(s)	462, 948, 1411
AcsI	RAATTY	1 cut(s)	670
AcuI	CTGAAG	2 cut(s)	93, 849
AcyI	GRCGYC	1 cut(s)	198
AfaI	GTAC	5 cut(s)	178, 255, 861, 935, 1235
AfiI	CCNNNNNNNGG	2 cut(s)	1019, 1067
AflIII	ACRYGT	1 cut(s)	256
AjnI	CCWGG	3 cut(s)	313, 847, 1018
AjuI	GAANNNNNNNTTGG	2 cut(s)	1275, 1307
AloI	GAACNNNNNNTCC	2 cut(s)	619, 651
AluBI	AGCT	6 cut(s)	75, 218, 304, 515, 748, 872
AluI	AGCT	6 cut(s)	75, 218, 304, 515, 748, 872
Alw21I	GWGCWC	1 cut(s)	694
Alw26I	GTCTC	2 cut(s)	264, 777
AlwI	GGATC	4 cut(s)	556, 969, 1122, 1253
AoxI	GGCC	3 cut(s)	462, 948, 1411
ApeKI	GCWGC	4 cut(s)	215, 310, 660, 998
ApoI	RAATTY	1 cut(s)	670
Asp700I	GAANNNNTTC	1 cut(s)	98
AspLEI	GCGC	3 cut(s)	200, 678, 913
AspS9I	GGNCC	1 cut(s)	1328
AsuC2I	CCSGG	2 cut(s)	466, 1112
AsuHPI	GGTGA	7 cut(s)	155, 604, 783, 890, 1245, 1428, 1520
AvaII	GGWCC	1 cut(s)	1328
AxyI	CCTNAGG	1 cut(s)	915
BaeI	ACNNNNGTAYC	2 cut(s)	843, 876
BanI	GGYRCC	1 cut(s)	197
BanII	GRGCYC	1 cut(s)	53
Bbv12I	GWGCWC	1 cut(s)	694
BbvI	GCAGC	4 cut(s)	227, 322, 647, 985
BccI	CCATC	4 cut(s)	404, 803, 818, 1406
BceAI	ACGGC	2 cut(s)	263, 673
BcgI	CGANNNNNNTGC	2 cut(s)	348, 382
BciT130I	CCWGG	3 cut(s)	315, 849, 1020
BciVI	GTATCC	1 cut(s)	412
BclI	TGATCA	1 cut(s)	66
BcnI	CCSGG	2 cut(s)	466, 1112
BcoDI	GTCTC	2 cut(s)	264, 777
BfaI	CTAG	1 cut(s)	873
BfoI	RGCGCY	2 cut(s)	201, 914
BfuAI	ACCTGC	2 cut(s)	1159, 1214
BfuI	GTATCC	1 cut(s)	412
BglI	GCCNNNNNGGC	1 cut(s)	1311
BglII	AGATCT	1 cut(s)	1559
BisI	GCNGC	6 cut(s)	216, 311, 661, 951, 999, 1414
BlsI	GCNGC	6 cut(s)	217, 312, 662, 952, 1000, 1415
Bme1390I	CCNGG	5 cut(s)	315, 466, 849, 1020, 1112
Bme18I	GGWCC	1 cut(s)	1328
BmgT120I	GGNCC	1 cut(s)	1328
BmiI	GGNNCC	2 cut(s)	199, 921
BmrFI	CCNGG	5 cut(s)	315, 466, 849, 1020, 1112
BmrI	ACTGGG	1 cut(s)	1008
BmsI	GCATC	7 cut(s)	364, 1066, 1135, 1259, 1323, 1487, 1494
BmuI	ACTGGG	1 cut(s)	1008
BpmI	CTGGAG	1 cut(s)	633
BpuEI	CTTGAG	2 cut(s)	295, 1492
BpuMI	CCSGG	2 cut(s)	466, 1112
Bsa29I	ATCGAT	1 cut(s)	368
BsaAI	YACGTR	1 cut(s)	1133
BsaHI	GRCGYC	1 cut(s)	198
BsaI	GGTCTC	1 cut(s)	777
BsaJI	CCNNGG	6 cut(s)	237, 314, 438, 822, 1083, 1306
BsaXI	ACNNNNNCTCC	2 cut(s)	619, 649
Bsc4I	CCNNNNNNNGG	2 cut(s)	1019, 1067
Bse1I	ACTGG	2 cut(s)	1014, 1331
Bse21I	CCTNAGG	1 cut(s)	915
BseBI	CCWGG	3 cut(s)	315, 849, 1020
BseCI	ATCGAT	1 cut(s)	368
BseDI	CCNNGG	6 cut(s)	237, 314, 438, 822, 1083, 1306
BseGI	GGATG	2 cut(s)	795, 1057
BseLI	CCNNNNNNNGG	2 cut(s)	1019, 1067
BseMII	CTCAG	1 cut(s)	929
BseNI	ACTGG	2 cut(s)	1014, 1331
BseRI	GAGGAG	5 cut(s)	179, 182, 632, 1086, 1554
BseXI	GCAGC	4 cut(s)	227, 322, 647, 985
BseYI	CCCAGC	2 cut(s)	26, 46
BsgI	GTGCAG	2 cut(s)	135, 234
BshFI	GGCC	3 cut(s)	464, 950, 1413
BshNI	GGYRCC	1 cut(s)	197
BshVI	ATCGAT	1 cut(s)	368
BsiHKAI	GWGCWC	1 cut(s)	694
BsiSI	CCGG	4 cut(s)	155, 201, 465, 1111
BslFI	GGGAC	1 cut(s)	693
BslI	CCNNNNNNNGG	2 cut(s)	1019, 1067
BsmAI	GTCTC	2 cut(s)	264, 777
BsmFI	GGGAC	1 cut(s)	693
BsmI	GAATGC	1 cut(s)	507
BsnI	GGCC	3 cut(s)	464, 950, 1413
Bso31I	GGTCTC	1 cut(s)	777
Bsp1286I	GDGCHC	2 cut(s)	53, 694
Bsp1407I	TGTACA	3 cut(s)	253, 933, 1233
Bsp143I	GATC	8 cut(s)	66, 548, 729, 974, 1114, 1258, 1467, 1559
BspACI	CCGC	2 cut(s)	951, 1414
BspANI	GGCC	3 cut(s)	464, 950, 1413
BspCNI	CTCAG	1 cut(s)	928
BspDI	ATCGAT	1 cut(s)	368
BspHI	TCATGA	1 cut(s)	63
BspLI	GGNNCC	2 cut(s)	199, 921
BspMI	ACCTGC	2 cut(s)	1159, 1214
BspPI	GGATC	4 cut(s)	556, 969, 1122, 1253
BspT107I	GGYRCC	1 cut(s)	197
BspTNI	GGTCTC	1 cut(s)	777
BsrGI	TGTACA	3 cut(s)	253, 933, 1233
BsrI	ACTGG	2 cut(s)	1014, 1331
BssECI	CCNNGG	6 cut(s)	237, 314, 438, 822, 1083, 1306
BssMI	GATC	8 cut(s)	66, 548, 729, 974, 1114, 1258, 1467, 1559
BssNI	GRCGYC	1 cut(s)	198
BssT1I	CCWWGG	3 cut(s)	237, 438, 1306
Bst2UI	CCWGG	3 cut(s)	315, 849, 1020
Bst4CI	ACNGT	7 cut(s)	143, 429, 452, 743, 904, 933, 1084
Bst6I	CTCTTC	1 cut(s)	1344
BstACI	GRCGYC	1 cut(s)	198
BstAPI	GCANNNNNTGC	1 cut(s)	221
BstAUI	TGTACA	3 cut(s)	253, 933, 1233
BstBAI	YACGTR	1 cut(s)	1133
BstDEI	CTNAG	3 cut(s)	686, 915, 1121
BstDSI	CCRYGG	1 cut(s)	1083
BstENI	CCTNNNNNAGG	1 cut(s)	1065
BstF5I	GGATG	2 cut(s)	795, 1057
BstH2I	RGCGCY	2 cut(s)	201, 914
BstHHI	GCGC	3 cut(s)	200, 678, 913
BstKTI	GATC	8 cut(s)	69, 551, 732, 977, 1117, 1261, 1470, 1562
BstMAI	GTCTC	2 cut(s)	264, 777
BstMBI	GATC	8 cut(s)	66, 548, 729, 974, 1114, 1258, 1467, 1559
BstMWI	GCNNNNNNNGC	9 cut(s)	113, 206, 215, 221, 310, 660, 947, 1302, 1311
BstNI	CCWGG	3 cut(s)	315, 849, 1020
BstNSI	RCATGY	3 cut(s)	260, 773, 1450
BstSCI	CCNGG	5 cut(s)	313, 464, 847, 1018, 1110
BstSNI	TACGTA	1 cut(s)	1133
BstV1I	GCAGC	4 cut(s)	227, 322, 647, 985
BstX2I	RGATCY	3 cut(s)	974, 1114, 1559
BstYI	RGATCY	3 cut(s)	974, 1114, 1559
Bsu15I	ATCGAT	1 cut(s)	368
Bsu36I	CCTNAGG	1 cut(s)	915
BsuI	GTATCC	1 cut(s)	412
BsuRI	GGCC	3 cut(s)	464, 950, 1413
BsuTUI	ATCGAT	1 cut(s)	368
BtgI	CCRYGG	1 cut(s)	1083
BtsCI	GGATG	2 cut(s)	795, 1057
BtsI	GCAGTG	1 cut(s)	1184
BtsIMutI	CAGTG	3 cut(s)	425, 558, 1184
BveI	ACCTGC	2 cut(s)	1159, 1214
CciI	TCATGA	1 cut(s)	63
CfoI	GCGC	3 cut(s)	200, 678, 913
Cfr13I	GGNCC	1 cut(s)	1328
ClaI	ATCGAT	1 cut(s)	368
Csp6I	GTAC	5 cut(s)	177, 254, 860, 934, 1234
CviAII	CATG	8 cut(s)	64, 257, 764, 770, 979, 994, 1051, 1447
CviQI	GTAC	5 cut(s)	177, 254, 860, 934, 1234
DdeI	CTNAG	3 cut(s)	686, 915, 1121
DinI	GGCGCC	1 cut(s)	199
DpnI	GATC	8 cut(s)	68, 550, 731, 976, 1116, 1260, 1469, 1561
DpnII	GATC	8 cut(s)	66, 548, 729, 974, 1114, 1258, 1467, 1559
EaeI	YGGCCR	3 cut(s)	462, 948, 1411
Eam1104I	CTCTTC	1 cut(s)	1344
EarI	CTCTTC	1 cut(s)	1344
Eco105I	TACGTA	1 cut(s)	1133
Eco130I	CCWWGG	3 cut(s)	237, 438, 1306
Eco24I	GRGCYC	1 cut(s)	53
Eco31I	GGTCTC	1 cut(s)	777
Eco32I	GATATC	1 cut(s)	323
Eco47I	GGWCC	1 cut(s)	1328
Eco57I	CTGAAG	2 cut(s)	93, 849
Eco81I	CCTNAGG	1 cut(s)	915
EcoNI	CCTNNNNNAGG	1 cut(s)	1065
EcoRII	CCWGG	3 cut(s)	313, 847, 1018
EcoRV	GATATC	1 cut(s)	323
EcoT14I	CCWWGG	3 cut(s)	237, 438, 1306
EcoT38I	GRGCYC	1 cut(s)	53
EgeI	GGCGCC	1 cut(s)	199
EheI	GGCGCC	1 cut(s)	199
ErhI	CCWWGG	3 cut(s)	237, 438, 1306
FaeI	CATG	8 cut(s)	67, 260, 767, 773, 982, 997, 1054, 1450
FalI	AAGNNNNNCTT	2 cut(s)	697, 729
FaqI	GGGAC	1 cut(s)	693
FatI	CATG	8 cut(s)	63, 256, 763, 769, 978, 993, 1050, 1446
FauNDI	CATATG	2 cut(s)	631, 1324
FbaI	TGATCA	1 cut(s)	66
Fnu4HI	GCNGC	6 cut(s)	216, 311, 661, 951, 999, 1414
FokI	GGATG	2 cut(s)	782, 1044
FriOI	GRGCYC	1 cut(s)	53
Fsp4HI	GCNGC	6 cut(s)	216, 311, 661, 951, 999, 1414
FspBI	CTAG	1 cut(s)	873
FspI	TGCGCA	1 cut(s)	677
GlaI	GCGC	3 cut(s)	199, 677, 912
GluI	GCNGC	6 cut(s)	216, 311, 661, 951, 999, 1414
GsaI	CCCAGC	2 cut(s)	30, 50
GsuI	CTGGAG	1 cut(s)	633
HaeII	RGCGCY	2 cut(s)	201, 914
HaeIII	GGCC	3 cut(s)	464, 950, 1413
HapII	CCGG	4 cut(s)	155, 201, 465, 1111
HhaI	GCGC	3 cut(s)	200, 678, 913
Hin1I	GRCGYC	1 cut(s)	198
Hin1II	CATG	8 cut(s)	67, 260, 767, 773, 982, 997, 1054, 1450
Hin6I	GCGC	3 cut(s)	198, 676, 911
HinP1I	GCGC	3 cut(s)	198, 676, 911
HincII	GTYRAC	1 cut(s)	958
HindII	GTYRAC	1 cut(s)	958
HinfI	GANTC	4 cut(s)	132, 365, 1040, 1172
HpaII	CCGG	4 cut(s)	155, 201, 465, 1111
HphI	GGTGA	7 cut(s)	155, 604, 783, 890, 1245, 1428, 1520
Hpy166II	GTNNAC	2 cut(s)	254, 958
Hpy188I	TCNGA	4 cut(s)	137, 457, 974, 1096
Hpy188III	TCNNGA	4 cut(s)	64, 347, 1471, 1495
Hpy8I	GTNNAC	2 cut(s)	254, 958
Hpy99I	CGWCG	1 cut(s)	659
HpyAV	CCTTC	6 cut(s)	236, 409, 798, 873, 1443, 1505
HpyCH4III	ACNGT	7 cut(s)	143, 429, 452, 743, 904, 933, 1084
HpyCH4IV	ACGT	1 cut(s)	1132
HpyF10VI	GCNNNNNNNGC	9 cut(s)	113, 206, 215, 221, 310, 660, 947, 1302, 1311
HpyF3I	CTNAG	3 cut(s)	686, 915, 1121
HpySE526I	ACGT	1 cut(s)	1132
Hsp92I	GRCGYC	1 cut(s)	198
Hsp92II	CATG	8 cut(s)	67, 260, 767, 773, 982, 997, 1054, 1450
HspAI	GCGC	3 cut(s)	198, 676, 911
KasI	GGCGCC	1 cut(s)	197
Ksp22I	TGATCA	1 cut(s)	66
Kzo9I	GATC	8 cut(s)	66, 548, 729, 974, 1114, 1258, 1467, 1559
LmnI	GCTCC	3 cut(s)	301, 640, 697
Lsp1109I	GCAGC	4 cut(s)	227, 322, 647, 985
LweI	GCATC	7 cut(s)	364, 1066, 1135, 1259, 1323, 1487, 1494
MaeI	CTAG	1 cut(s)	873
MaeII	ACGT	1 cut(s)	1132
MaeIII	GTNAC	1 cut(s)	553
MalI	GATC	8 cut(s)	68, 550, 731, 976, 1116, 1260, 1469, 1561
MboI	GATC	8 cut(s)	66, 548, 729, 974, 1114, 1258, 1467, 1559
MboII	GAAGA	5 cut(s)	52, 362, 1097, 1109, 1331
MflI	RGATCY	3 cut(s)	974, 1114, 1559
MhlI	GDGCHC	2 cut(s)	53, 694
MluCI	AATT	8 cut(s)	98, 261, 291, 329, 670, 1026, 1162, 1515
Mly113I	GGCGCC	1 cut(s)	198
MroXI	GAANNNNTTC	1 cut(s)	98
MseI	TTAA	2 cut(s)	1353, 1418
MslI	CAYNNNNRTG	1 cut(s)	768
MspA1I	CMGCKG	1 cut(s)	953
MspI	CCGG	4 cut(s)	155, 201, 465, 1111
MspR9I	CCNGG	5 cut(s)	315, 466, 849, 1020, 1112
Mva1269I	GAATGC	1 cut(s)	507
MvaI	CCWGG	3 cut(s)	315, 849, 1020
MwoI	GCNNNNNNNGC	9 cut(s)	113, 206, 215, 221, 310, 660, 947, 1302, 1311
NarI	GGCGCC	1 cut(s)	198
NciI	CCSGG	2 cut(s)	466, 1112
NdeI	CATATG	2 cut(s)	631, 1324
NdeII	GATC	8 cut(s)	66, 548, 729, 974, 1114, 1258, 1467, 1559
NlaIII	CATG	8 cut(s)	67, 260, 767, 773, 982, 997, 1054, 1450
NlaIV	GGNNCC	2 cut(s)	199, 921
NmuCI	GTSAC	1 cut(s)	553
NsbI	TGCGCA	1 cut(s)	677
NspI	RCATGY	3 cut(s)	260, 773, 1450
PagI	TCATGA	1 cut(s)	63
PaqCI	CACCTGC	2 cut(s)	1159, 1214
PciI	ACATGT	1 cut(s)	256
PctI	GAATGC	1 cut(s)	507
PdmI	GAANNNNTTC	1 cut(s)	98
PfeI	GAWTC	4 cut(s)	132, 365, 1040, 1172
PfoI	TCCNGGA	1 cut(s)	1110
PkrI	GCNGC	6 cut(s)	217, 312, 662, 952, 1000, 1415
PluTI	GGCGCC	1 cut(s)	201
Ppu21I	YACGTR	1 cut(s)	1133
PscI	ACATGT	1 cut(s)	256
PsiI	TTATAA	1 cut(s)	1502
Psp6I	CCWGG	3 cut(s)	313, 847, 1018
PspFI	CCCAGC	2 cut(s)	26, 46
PspGI	CCWGG	3 cut(s)	313, 847, 1018
PspN4I	GGNNCC	2 cut(s)	199, 921
PspPI	GGNCC	1 cut(s)	1328
PsuI	RGATCY	3 cut(s)	974, 1114, 1559
RsaI	GTAC	5 cut(s)	178, 255, 861, 935, 1235
RsaNI	GTAC	5 cut(s)	177, 254, 860, 934, 1234
RseI	CAYNNNNRTG	1 cut(s)	768
SaqAI	TTAA	2 cut(s)	1353, 1418
SatI	GCNGC	6 cut(s)	216, 311, 661, 951, 999, 1414
Sau3AI	GATC	8 cut(s)	66, 548, 729, 974, 1114, 1258, 1467, 1559
Sau96I	GGNCC	1 cut(s)	1328
ScrFI	CCNGG	5 cut(s)	315, 466, 849, 1020, 1112
SduI	GDGCHC	2 cut(s)	53, 694
SfaNI	GCATC	7 cut(s)	364, 1066, 1135, 1259, 1323, 1487, 1494
SfoI	GGCGCC	1 cut(s)	199
SinI	GGWCC	1 cut(s)	1328
SmiMI	CAYNNNNRTG	1 cut(s)	768
SmlI	CTYRAG	2 cut(s)	274, 1471
SmoI	CTYRAG	2 cut(s)	274, 1471
SnaBI	TACGTA	1 cut(s)	1133
Sse9I	AATT	8 cut(s)	98, 261, 291, 329, 670, 1026, 1162, 1515
SsiI	CCGC	2 cut(s)	951, 1414
SspDI	GGCGCC	1 cut(s)	197
SspMI	CTAG	1 cut(s)	873
StyD4I	CCNGG	5 cut(s)	313, 464, 847, 1018, 1110
StyI	CCWWGG	3 cut(s)	237, 438, 1306
TaaI	ACNGT	7 cut(s)	143, 429, 452, 743, 904, 933, 1084
TaiI	ACGT	1 cut(s)	1135
TaqI	TCGA	2 cut(s)	368, 1462
TasI	AATT	8 cut(s)	98, 261, 291, 329, 670, 1026, 1162, 1515
TatI	WGTACW	3 cut(s)	253, 933, 1233
TauI	GCSGC	2 cut(s)	953, 1416
TfiI	GAWTC	4 cut(s)	132, 365, 1040, 1172
Tru1I	TTAA	2 cut(s)	1353, 1418
Tru9I	TTAA	2 cut(s)	1353, 1418
TscAI	CASTG	3 cut(s)	432, 558, 1191
TseFI	GTSAC	1 cut(s)	553
TseI	GCWGC	4 cut(s)	215, 310, 660, 998
Tsp45I	GTSAC	1 cut(s)	553
TspDTI	ATGAA	5 cut(s)	52, 378, 481, 1032, 1562
TspGWI	ACGGA	1 cut(s)	1416
TspRI	CASTG	3 cut(s)	432, 558, 1191
VpaK11BI	GGWCC	1 cut(s)	1328
XagI	CCTNNNNNAGG	1 cut(s)	1065
XapI	RAATTY	1 cut(s)	670
XceI	RCATGY	3 cut(s)	260, 773, 1450
XcmI	CCANNNNNNNNNTGG	2 cut(s)	386, 1216
XmnI	GAANNNNTTC	1 cut(s)	98
XspI	CTAG	1 cut(s)	873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.