Transcriptional activator
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04560 AT5G04560 AT5G04560 |
| fragaria_vesca | FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 |
| malus_domestica | MD02G1245300.v1.1 MD07G1071800.v1.1 MD09G1259000.v1.1 MD09G1259100.v1.1 MD17G1253500.v1.1 MD17G1253600.v1.1 |
| prunus_persica | Prupe.2G089400_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 |
| pyrus_communis | pycom02g21110 pycom09g17380 pycom17g25620 pycom17g25630 |
| rosa_chinensis | RchiOBHm_Chr6g0267351 RchiOBHm_Chr6g0267361 |
| rosa_laevigata | RLG00000014013 |
| rosa_multiflora | Rmu_sc0000746.1_g000002 Rmu_sc0019664.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00200830 |
| rosa_rugosa | Rorug06G0031600 Rorug06G0031700 Rorug06G0031800 Rorug06G0031900 Rorug06G0032000 |
| rosa_samantha | Rh6AG153500 Rh6BG153200 Rh6CG149300 Rh6DG137600 |
| rosa_wichuraiana | Rw6G013200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1209 |
| Acc36I | ACCTGC | 2 cut(s) | 680, 1209 |
| AccI | GTMKAC | 3 cut(s) | 526, 964, 1177 |
| AciI | CCGC | 3 cut(s) | 92, 630, 662 |
| AclWI | GGATC | 2 cut(s) | 791, 1040 |
| AcoI | YGGCCR | 1 cut(s) | 398 |
| AcsI | RAATTY | 5 cut(s) | 107, 916, 1195, 1294, 1332 |
| AcuI | CTGAAG | 1 cut(s) | 971 |
| AdeI | CACNNNGTG | 1 cut(s) | 985 |
| AfaI | GTAC | 4 cut(s) | 365, 478, 694, 1139 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 373, 515, 570 |
| AflIII | ACRYGT | 1 cut(s) | 891 |
| AgsI | TTSAA | 8 cut(s) | 220, 323, 386, 600, 614, 916, 1200, 1205 |
| AjnI | CCWGG | 3 cut(s) | 568, 1078, 1180 |
| AluBI | AGCT | 8 cut(s) | 439, 638, 760, 877, 926, 949, 1067, 1087 |
| AluI | AGCT | 8 cut(s) | 439, 638, 760, 877, 926, 949, 1067, 1087 |
| Alw21I | GWGCWC | 1 cut(s) | 981 |
| AlwI | GGATC | 2 cut(s) | 791, 1040 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 695 |
| Ama87I | CYCGRG | 1 cut(s) | 617 |
| AoxI | GGCC | 2 cut(s) | 398, 572 |
| ApeKI | GCWGC | 1 cut(s) | 439 |
| ApoI | RAATTY | 5 cut(s) | 107, 916, 1195, 1294, 1332 |
| AspS9I | GGNCC | 2 cut(s) | 313, 572 |
| AsuC2I | CCSGG | 1 cut(s) | 269 |
| AsuHPI | GGTGA | 3 cut(s) | 245, 899, 1336 |
| AsuNHI | GCTAGC | 1 cut(s) | 88 |
| AvaI | CYCGRG | 1 cut(s) | 617 |
| AvaII | GGWCC | 1 cut(s) | 313 |
| BalI | TGGCCA | 1 cut(s) | 400 |
| BbsI | GAAGAC | 1 cut(s) | 1265 |
| Bbv12I | GWGCWC | 1 cut(s) | 981 |
| BbvI | GCAGC | 1 cut(s) | 426 |
| BccI | CCATC | 3 cut(s) | 303, 824, 1018 |
| BciT130I | CCWGG | 3 cut(s) | 570, 1080, 1182 |
| BclI | TGATCA | 1 cut(s) | 418 |
| BcnI | CCSGG | 1 cut(s) | 269 |
| BfaI | CTAG | 2 cut(s) | 89, 1064 |
| BfmI | CTRYAG | 1 cut(s) | 341 |
| BfuAI | ACCTGC | 2 cut(s) | 680, 1209 |
| BisI | GCNGC | 1 cut(s) | 440 |
| BlsI | GCNGC | 1 cut(s) | 441 |
| Bme1390I | CCNGG | 4 cut(s) | 269, 570, 1080, 1182 |
| Bme18I | GGWCC | 1 cut(s) | 313 |
| BmeT110I | CYCGRG | 1 cut(s) | 617 |
| BmgT120I | GGNCC | 2 cut(s) | 313, 572 |
| BmiI | GGNNCC | 4 cut(s) | 314, 315, 1038, 1228 |
| BmrFI | CCNGG | 4 cut(s) | 269, 570, 1080, 1182 |
| BmrI | ACTGGG | 1 cut(s) | 314 |
| BmsI | GCATC | 7 cut(s) | 46, 150, 243, 1015, 1101, 1144, 1177 |
| BmtI | GCTAGC | 1 cut(s) | 92 |
| BmuI | ACTGGG | 1 cut(s) | 314 |
| BpiI | GAAGAC | 1 cut(s) | 1265 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 659, 691 |
| BpmI | CTGGAG | 2 cut(s) | 395, 665 |
| BpuEI | CTTGAG | 1 cut(s) | 1073 |
| BpuMI | CCSGG | 1 cut(s) | 269 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1005 |
| BsaJI | CCNNGG | 2 cut(s) | 569, 1181 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 373, 515, 570 |
| Bse1I | ACTGG | 2 cut(s) | 126, 309 |
| Bse3DI | GCAATG | 2 cut(s) | 505, 1258 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1005 |
| BseBI | CCWGG | 3 cut(s) | 570, 1080, 1182 |
| BseDI | CCNNGG | 2 cut(s) | 569, 1181 |
| BseGI | GGATG | 5 cut(s) | 81, 234, 314, 1006, 1029 |
| BseJI | GATNNNNATC | 1 cut(s) | 1005 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 373, 515, 570 |
| BseMI | GCAATG | 2 cut(s) | 505, 1258 |
| BseMII | CTCAG | 2 cut(s) | 657, 1098 |
| BseNI | ACTGG | 2 cut(s) | 126, 309 |
| BseRI | GAGGAG | 1 cut(s) | 531 |
| BseXI | GCAGC | 1 cut(s) | 426 |
| BsgI | GTGCAG | 1 cut(s) | 425 |
| BshFI | GGCC | 2 cut(s) | 400, 574 |
| BsiHKAI | GWGCWC | 1 cut(s) | 981 |
| BsiHKCI | CYCGRG | 1 cut(s) | 617 |
| BsiSI | CCGG | 2 cut(s) | 238, 269 |
| BslFI | GGGAC | 2 cut(s) | 299, 1327 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 373, 515, 570 |
| BsmFI | GGGAC | 2 cut(s) | 299, 1327 |
| BsmI | GAATGC | 1 cut(s) | 105 |
| BsnI | GGCC | 2 cut(s) | 400, 574 |
| BsoBI | CYCGRG | 1 cut(s) | 617 |
| Bsp1286I | GDGCHC | 1 cut(s) | 981 |
| Bsp1407I | TGTACA | 2 cut(s) | 476, 1137 |
| Bsp143I | GATC | 4 cut(s) | 418, 796, 1045, 1234 |
| BspACI | CCGC | 3 cut(s) | 92, 630, 662 |
| BspANI | GGCC | 2 cut(s) | 400, 574 |
| BspCNI | CTCAG | 2 cut(s) | 658, 1099 |
| BspLI | GGNNCC | 4 cut(s) | 314, 315, 1038, 1228 |
| BspMAI | CTGCAG | 1 cut(s) | 345 |
| BspMI | ACCTGC | 2 cut(s) | 680, 1209 |
| BspOI | GCTAGC | 1 cut(s) | 92 |
| BspPI | GGATC | 2 cut(s) | 791, 1040 |
| BspQI | GCTCTTC | 1 cut(s) | 720 |
| BsrDI | GCAATG | 2 cut(s) | 505, 1258 |
| BsrGI | TGTACA | 2 cut(s) | 476, 1137 |
| BsrI | ACTGG | 2 cut(s) | 126, 309 |
| BssECI | CCNNGG | 2 cut(s) | 569, 1181 |
| BssMI | GATC | 4 cut(s) | 418, 796, 1045, 1234 |
| BssNAI | GTATAC | 1 cut(s) | 1178 |
| Bst1107I | GTATAC | 1 cut(s) | 1178 |
| Bst2UI | CCWGG | 3 cut(s) | 570, 1080, 1182 |
| Bst4CI | ACNGT | 5 cut(s) | 363, 697, 1175, 1248, 1306 |
| Bst6I | CTCTTC | 4 cut(s) | 573, 578, 720, 828 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 560 |
| BstAUI | TGTACA | 2 cut(s) | 476, 1137 |
| BstC8I | GCNNGC | 2 cut(s) | 90, 732 |
| BstDEI | CTNAG | 4 cut(s) | 355, 666, 904, 1107 |
| BstF5I | GGATG | 5 cut(s) | 81, 234, 314, 1006, 1029 |
| BstKTI | GATC | 4 cut(s) | 421, 799, 1048, 1237 |
| BstMBI | GATC | 4 cut(s) | 418, 796, 1045, 1234 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 560, 736, 908, 1224, 1272 |
| BstNI | CCWGG | 3 cut(s) | 570, 1080, 1182 |
| BstNSI | RCATGY | 3 cut(s) | 507, 895, 1266 |
| BstSCI | CCNGG | 4 cut(s) | 267, 568, 1078, 1180 |
| BstSFI | CTRYAG | 1 cut(s) | 341 |
| BstV1I | GCAGC | 1 cut(s) | 426 |
| BstV2I | GAAGAC | 1 cut(s) | 1265 |
| BstX2I | RGATCY | 1 cut(s) | 796 |
| BstYI | RGATCY | 1 cut(s) | 796 |
| BstZ17I | GTATAC | 1 cut(s) | 1178 |
| BsuRI | GGCC | 2 cut(s) | 400, 574 |
| BtsCI | GGATG | 5 cut(s) | 81, 234, 314, 1006, 1029 |
| BtsI | GCAGTG | 2 cut(s) | 338, 653 |
| BtsIMutI | CAGTG | 2 cut(s) | 338, 653 |
| BveI | ACCTGC | 2 cut(s) | 680, 1209 |
| Cac8I | GCNNGC | 2 cut(s) | 90, 732 |
| CaiI | CAGNNNCTG | 1 cut(s) | 695 |
| Cfr13I | GGNCC | 2 cut(s) | 313, 572 |
| CsiI | ACCWGGT | 1 cut(s) | 1078 |
| Csp6I | GTAC | 4 cut(s) | 364, 477, 693, 1138 |
| CviAII | CATG | 6 cut(s) | 134, 504, 829, 892, 1263, 1272 |
| CviQI | GTAC | 4 cut(s) | 364, 477, 693, 1138 |
| DdeI | CTNAG | 4 cut(s) | 355, 666, 904, 1107 |
| DpnI | GATC | 4 cut(s) | 420, 798, 1047, 1236 |
| DpnII | GATC | 4 cut(s) | 418, 796, 1045, 1234 |
| DraIII | CACNNNGTG | 1 cut(s) | 985 |
| EaeI | YGGCCR | 1 cut(s) | 398 |
| Eam1104I | CTCTTC | 4 cut(s) | 573, 578, 720, 828 |
| EarI | CTCTTC | 4 cut(s) | 573, 578, 720, 828 |
| EciI | GGCGGA | 1 cut(s) | 651 |
| Eco47I | GGWCC | 1 cut(s) | 313 |
| Eco57I | CTGAAG | 1 cut(s) | 971 |
| Eco88I | CYCGRG | 1 cut(s) | 617 |
| EcoO109I | RGGNCCY | 1 cut(s) | 313 |
| EcoRI | GAATTC | 2 cut(s) | 107, 916 |
| EcoRII | CCWGG | 3 cut(s) | 568, 1078, 1180 |
| EcoT22I | ATGCAT | 3 cut(s) | 505, 1116, 1159 |
| FaeI | CATG | 6 cut(s) | 137, 507, 832, 895, 1266, 1275 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1250, 1282 |
| FaqI | GGGAC | 2 cut(s) | 299, 1327 |
| FatI | CATG | 6 cut(s) | 133, 503, 828, 891, 1262, 1271 |
| FauI | CCCGC | 1 cut(s) | 637 |
| FbaI | TGATCA | 1 cut(s) | 418 |
| FblI | GTMKAC | 3 cut(s) | 526, 964, 1177 |
| Fnu4HI | GCNGC | 1 cut(s) | 440 |
| FokI | GGATG | 5 cut(s) | 88, 221, 321, 993, 1036 |
| Fsp4HI | GCNGC | 1 cut(s) | 440 |
| FspBI | CTAG | 2 cut(s) | 89, 1064 |
| GluI | GCNGC | 1 cut(s) | 440 |
| GsuI | CTGGAG | 2 cut(s) | 395, 665 |
| HaeIII | GGCC | 2 cut(s) | 400, 574 |
| HapII | CCGG | 2 cut(s) | 238, 269 |
| Hin1II | CATG | 6 cut(s) | 137, 507, 832, 895, 1266, 1275 |
| HincII | GTYRAC | 2 cut(s) | 274, 753 |
| HindII | GTYRAC | 2 cut(s) | 274, 753 |
| HinfI | GANTC | 7 cut(s) | 5, 335, 377, 382, 808, 1001, 1162 |
| HpaII | CCGG | 2 cut(s) | 238, 269 |
| HphI | GGTGA | 3 cut(s) | 245, 899, 1336 |
| Hpy166II | GTNNAC | 8 cut(s) | 274, 488, 527, 713, 753, 840, 965, 1178 |
| Hpy188I | TCNGA | 4 cut(s) | 55, 766, 922, 1310 |
| Hpy188III | TCNNGA | 5 cut(s) | 11, 149, 682, 800, 1090 |
| Hpy8I | GTNNAC | 8 cut(s) | 274, 488, 527, 713, 753, 840, 965, 1178 |
| HpyAV | CCTTC | 5 cut(s) | 282, 329, 878, 1013, 1070 |
| HpyCH4III | ACNGT | 5 cut(s) | 363, 697, 1175, 1248, 1306 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 560, 736, 908, 1224, 1272 |
| HpyF3I | CTNAG | 4 cut(s) | 355, 666, 904, 1107 |
| Hsp92II | CATG | 6 cut(s) | 137, 507, 832, 895, 1266, 1275 |
| KflI | GGGWCCC | 1 cut(s) | 313 |
| Ksp22I | TGATCA | 1 cut(s) | 418 |
| Kzo9I | GATC | 4 cut(s) | 418, 796, 1045, 1234 |
| LguI | GCTCTTC | 1 cut(s) | 720 |
| LmnI | GCTCC | 4 cut(s) | 67, 882, 976, 1232 |
| Lsp1109I | GCAGC | 1 cut(s) | 426 |
| LweI | GCATC | 7 cut(s) | 46, 150, 243, 1015, 1101, 1144, 1177 |
| MabI | ACCWGGT | 1 cut(s) | 1078 |
| MaeI | CTAG | 2 cut(s) | 89, 1064 |
| MaeIII | GTNAC | 4 cut(s) | 640, 651, 697, 887 |
| MalI | GATC | 4 cut(s) | 420, 798, 1047, 1236 |
| MboI | GATC | 4 cut(s) | 418, 796, 1045, 1234 |
| MflI | RGATCY | 1 cut(s) | 796 |
| MhlI | GDGCHC | 1 cut(s) | 981 |
| MlsI | TGGCCA | 1 cut(s) | 400 |
| MluCI | AATT | 9 cut(s) | 107, 493, 588, 774, 916, 1195, 1200, 1294, 1332 |
| MluNI | TGGCCA | 1 cut(s) | 400 |
| MlyI | GAGTC | 1 cut(s) | 386 |
| MmeI | TCCRAC | 1 cut(s) | 265 |
| MnlI | CCTC | 8 cut(s) | 65, 200, 362, 509, 669, 772, 1304, 1320 |
| Mox20I | TGGCCA | 1 cut(s) | 400 |
| Mph1103I | ATGCAT | 3 cut(s) | 505, 1116, 1159 |
| MscI | TGGCCA | 1 cut(s) | 400 |
| MseI | TTAA | 4 cut(s) | 158, 197, 245, 1336 |
| MslI | CAYNNNNRTG | 1 cut(s) | 647 |
| Msp20I | TGGCCA | 1 cut(s) | 400 |
| MspI | CCGG | 2 cut(s) | 238, 269 |
| MspR9I | CCNGG | 4 cut(s) | 269, 570, 1080, 1182 |
| Mva1269I | GAATGC | 1 cut(s) | 105 |
| MvaI | CCWGG | 3 cut(s) | 570, 1080, 1182 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 560, 736, 908, 1224, 1272 |
| NciI | CCSGG | 1 cut(s) | 269 |
| NdeII | GATC | 4 cut(s) | 418, 796, 1045, 1234 |
| NheI | GCTAGC | 1 cut(s) | 88 |
| NlaIII | CATG | 6 cut(s) | 137, 507, 832, 895, 1266, 1275 |
| NlaIV | GGNNCC | 4 cut(s) | 314, 315, 1038, 1228 |
| NmuCI | GTSAC | 3 cut(s) | 640, 651, 887 |
| NsiI | ATGCAT | 3 cut(s) | 505, 1116, 1159 |
| NspI | RCATGY | 3 cut(s) | 507, 895, 1266 |
| PaqCI | CACCTGC | 1 cut(s) | 1209 |
| PciI | ACATGT | 1 cut(s) | 891 |
| PciSI | GCTCTTC | 1 cut(s) | 720 |
| PctI | GAATGC | 1 cut(s) | 105 |
| PfeI | GAWTC | 5 cut(s) | 335, 382, 808, 1001, 1162 |
| PkrI | GCNGC | 1 cut(s) | 441 |
| PleI | GAGTC | 1 cut(s) | 385 |
| PpsI | GAGTC | 1 cut(s) | 385 |
| PpuMI | RGGWCCY | 1 cut(s) | 313 |
| PscI | ACATGT | 1 cut(s) | 891 |
| Psp5II | RGGWCCY | 1 cut(s) | 313 |
| Psp6I | CCWGG | 3 cut(s) | 568, 1078, 1180 |
| PspGI | CCWGG | 3 cut(s) | 568, 1078, 1180 |
| PspN4I | GGNNCC | 4 cut(s) | 314, 315, 1038, 1228 |
| PspPI | GGNCC | 2 cut(s) | 313, 572 |
| PspPPI | RGGWCCY | 1 cut(s) | 313 |
| PstI | CTGCAG | 1 cut(s) | 345 |
| PstNI | CAGNNNCTG | 1 cut(s) | 695 |
| PsuI | RGATCY | 1 cut(s) | 796 |
| RsaI | GTAC | 4 cut(s) | 365, 478, 694, 1139 |
| RsaNI | GTAC | 4 cut(s) | 364, 477, 693, 1138 |
| RseI | CAYNNNNRTG | 1 cut(s) | 647 |
| SapI | GCTCTTC | 1 cut(s) | 720 |
| SaqAI | TTAA | 4 cut(s) | 158, 197, 245, 1336 |
| SatI | GCNGC | 1 cut(s) | 440 |
| Sau3AI | GATC | 4 cut(s) | 418, 796, 1045, 1234 |
| Sau96I | GGNCC | 2 cut(s) | 313, 572 |
| SchI | GAGTC | 1 cut(s) | 386 |
| ScrFI | CCNGG | 4 cut(s) | 269, 570, 1080, 1182 |
| SduI | GDGCHC | 1 cut(s) | 981 |
| SexAI | ACCWGGT | 1 cut(s) | 1078 |
| SfaNI | GCATC | 7 cut(s) | 46, 150, 243, 1015, 1101, 1144, 1177 |
| SfcI | CTRYAG | 1 cut(s) | 341 |
| SinI | GGWCC | 1 cut(s) | 313 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 647 |
| SmlI | CTYRAG | 1 cut(s) | 1088 |
| SmoI | CTYRAG | 1 cut(s) | 1088 |
| Sse9I | AATT | 9 cut(s) | 107, 493, 588, 774, 916, 1195, 1200, 1294, 1332 |
| SsiI | CCGC | 3 cut(s) | 92, 630, 662 |
| SspMI | CTAG | 2 cut(s) | 89, 1064 |
| StyD4I | CCNGG | 4 cut(s) | 267, 568, 1078, 1180 |
| TaaI | ACNGT | 5 cut(s) | 363, 697, 1175, 1248, 1306 |
| TaqI | TCGA | 3 cut(s) | 380, 723, 845 |
| TasI | AATT | 9 cut(s) | 107, 493, 588, 774, 916, 1195, 1200, 1294, 1332 |
| TatI | WGTACW | 2 cut(s) | 476, 1137 |
| TfiI | GAWTC | 5 cut(s) | 335, 382, 808, 1001, 1162 |
| Tru1I | TTAA | 4 cut(s) | 158, 197, 245, 1336 |
| Tru9I | TTAA | 4 cut(s) | 158, 197, 245, 1336 |
| TscAI | CASTG | 2 cut(s) | 345, 660 |
| TseFI | GTSAC | 3 cut(s) | 640, 651, 887 |
| TseI | GCWGC | 1 cut(s) | 439 |
| Tsp45I | GTSAC | 3 cut(s) | 640, 651, 887 |
| TspDTI | ATGAA | 6 cut(s) | 33, 92, 150, 807, 1005, 1260 |
| TspGWI | ACGGA | 1 cut(s) | 989 |
| TspRI | CASTG | 2 cut(s) | 345, 660 |
| VpaK11BI | GGWCC | 1 cut(s) | 313 |
| XapI | RAATTY | 5 cut(s) | 107, 916, 1195, 1294, 1332 |
| XceI | RCATGY | 3 cut(s) | 507, 895, 1266 |
| XmiI | GTMKAC | 3 cut(s) | 526, 964, 1177 |
| XspI | CTAG | 2 cut(s) | 89, 1064 |
| Zsp2I | ATGCAT | 3 cut(s) | 505, 1116, 1159 |