Transcriptional activator
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04560 AT5G04560 AT5G04560 |
| fragaria_vesca | FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 |
| malus_domestica | MD02G1245300.v1.1 MD07G1071800.v1.1 MD09G1259000.v1.1 MD09G1259100.v1.1 MD17G1253500.v1.1 MD17G1253600.v1.1 |
| prunus_persica | Prupe.2G089400_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 |
| pyrus_communis | pycom02g21110 pycom09g17380 pycom17g25620 pycom17g25630 |
| rosa_chinensis | RchiOBHm_Chr6g0267351 RchiOBHm_Chr6g0267361 |
| rosa_laevigata | RLG00000014013 |
| rosa_multiflora | Rmu_sc0000746.1_g000002 Rmu_sc0019664.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00200830 |
| rosa_rugosa | Rorug06G0031600 Rorug06G0031700 Rorug06G0031800 Rorug06G0031900 Rorug06G0032000 |
| rosa_samantha | Rh6AG153500 Rh6BG153200 Rh6CG149300 Rh6DG137600 |
| rosa_wichuraiana | Rw6G013200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4391 |
| AarI | CACCTGC | 2 cut(s) | 150, 5532 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1781, 4643 |
| AatII | GACGTC | 1 cut(s) | 2637 |
| Acc36I | ACCTGC | 4 cut(s) | 150, 582, 2437, 5532 |
| Acc65I | GGTACC | 1 cut(s) | 64 |
| AccB1I | GGYRCC | 2 cut(s) | 64, 3408 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 3159, 3689, 5687 |
| AccBSI | CCGCTC | 1 cut(s) | 1868 |
| AccI | GTMKAC | 5 cut(s) | 2623, 2631, 4564, 5389, 5793 |
| AccIII | TCCGGA | 2 cut(s) | 76, 5394 |
| AciI | CCGC | 4 cut(s) | 355, 1014, 1845, 1866 |
| AcoI | YGGCCR | 3 cut(s) | 1208, 1993, 4760 |
| AcuI | CTGAAG | 3 cut(s) | 1785, 1799, 4688 |
| AcyI | GRCGYC | 1 cut(s) | 2634 |
| AdeI | CACNNNGTG | 3 cut(s) | 3408, 5410, 5507 |
| AflIII | ACRYGT | 5 cut(s) | 1684, 2390, 3675, 4305, 5316 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1770, 1802 |
| AleI | CACNNNNGTG | 1 cut(s) | 2354 |
| Alw21I | GWGCWC | 6 cut(s) | 323, 4107, 4918, 5304, 5406, 5908 |
| Alw26I | GTCTC | 7 cut(s) | 1433, 1675, 2173, 2227, 2949, 3231, 3239 |
| Alw44I | GTGCAC | 1 cut(s) | 4914 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 803 |
| Aor13HI | TCCGGA | 2 cut(s) | 76, 5394 |
| ApaLI | GTGCAC | 1 cut(s) | 4914 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3124, 3156, 3321, 3353 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 963, 1812, 3633, 4053, 4701 |
| Asp718I | GGTACC | 1 cut(s) | 64 |
| AspLEI | GCGC | 1 cut(s) | 3350 |
| AspS9I | GGNCC | 7 cut(s) | 594, 1128, 1507, 3883, 4675, 4934, 5787 |
| AsuC2I | CCSGG | 2 cut(s) | 2436, 4631 |
| AsuHPI | GGTGA | 9 cut(s) | 722, 989, 1076, 1817, 2403, 3010, 4607, 5324, 5519 |
| AsuII | TTCGAA | 1 cut(s) | 3327 |
| AsuNHI | GCTAGC | 3 cut(s) | 200, 908, 4450 |
| AvaII | GGWCC | 4 cut(s) | 594, 3883, 4675, 5787 |
| BaeGI | GKGCMC | 2 cut(s) | 1463, 4918 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 5793, 5826 |
| BalI | TGGCCA | 2 cut(s) | 1995, 4762 |
| BamHI | GGATCC | 4 cut(s) | 1895, 2498, 3521, 5218 |
| BanI | GGYRCC | 2 cut(s) | 64, 3408 |
| BanII | GRGCYC | 2 cut(s) | 4107, 5304 |
| BbsI | GAAGAC | 3 cut(s) | 1826, 2495, 5588 |
| Bbv12I | GWGCWC | 6 cut(s) | 323, 4107, 4918, 5304, 5406, 5908 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 857, 891, 4876, 4910 |
| BciVI | GTATCC | 2 cut(s) | 1727, 2087 |
| BclI | TGATCA | 2 cut(s) | 303, 4780 |
| BcnI | CCSGG | 2 cut(s) | 2436, 4631 |
| BcoDI | GTCTC | 7 cut(s) | 1433, 1675, 2173, 2227, 2949, 3231, 3239 |
| BfoI | RGCGCY | 1 cut(s) | 3351 |
| BfuAI | ACCTGC | 4 cut(s) | 150, 582, 2437, 5532 |
| BfuI | GTATCC | 2 cut(s) | 1727, 2087 |
| BglII | AGATCT | 2 cut(s) | 2513, 3737 |
| BlpI | GCTNAGC | 1 cut(s) | 4455 |
| BmcAI | AGTACT | 2 cut(s) | 1860, 5116 |
| Bme18I | GGWCC | 4 cut(s) | 594, 3883, 4675, 5787 |
| BmgT120I | GGNCC | 7 cut(s) | 594, 1128, 1507, 3883, 4675, 4934, 5787 |
| BmrI | ACTGGG | 5 cut(s) | 113, 1066, 3414, 4309, 4676 |
| BmsI | GCATC | 8 cut(s) | 502, 790, 1530, 2545, 3139, 3902, 3944, 4408 |
| BmtI | GCTAGC | 3 cut(s) | 204, 912, 4454 |
| BmuI | ACTGGG | 5 cut(s) | 113, 1066, 3414, 4309, 4676 |
| BoxI | GACNNNNGTC | 2 cut(s) | 630, 3907 |
| BpiI | GAAGAC | 3 cut(s) | 1826, 2495, 5588 |
| BpmI | CTGGAG | 2 cut(s) | 4757, 5087 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1110 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 4455 |
| Bpu14I | TTCGAA | 1 cut(s) | 3327 |
| BpuEI | CTTGAG | 5 cut(s) | 603, 670, 1428, 3300, 3849 |
| BpuMI | CCSGG | 2 cut(s) | 2436, 4631 |
| Bsa29I | ATCGAT | 1 cut(s) | 3576 |
| BsaBI | GATNNNNATC | 2 cut(s) | 113, 5430 |
| BsaHI | GRCGYC | 1 cut(s) | 2634 |
| BsaI | GGTCTC | 1 cut(s) | 3239 |
| BsaWI | WCCGGW | 3 cut(s) | 76, 5394, 5892 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 336, 366, 2264, 2294 |
| Bse118I | RCCGGY | 2 cut(s) | 67, 1206 |
| Bse8I | GATNNNNATC | 2 cut(s) | 113, 5430 |
| BseAI | TCCGGA | 2 cut(s) | 76, 5394 |
| BseCI | ATCGAT | 1 cut(s) | 3576 |
| BseJI | GATNNNNATC | 2 cut(s) | 113, 5430 |
| BseRI | GAGGAG | 4 cut(s) | 769, 1409, 2126, 4893 |
| BseSI | GKGCMC | 2 cut(s) | 1463, 4918 |
| BseYI | CCCAGC | 1 cut(s) | 4271 |
| BsgI | GTGCAG | 3 cut(s) | 2754, 4787, 4822 |
| BshNI | GGYRCC | 2 cut(s) | 64, 3408 |
| BshVI | ATCGAT | 1 cut(s) | 3576 |
| BsiHKAI | GWGCWC | 6 cut(s) | 323, 4107, 4918, 5304, 5406, 5908 |
| BsiSI | CCGG | 8 cut(s) | 68, 77, 1207, 2435, 4600, 4631, 5395, 5893 |
| BslFI | GGGAC | 7 cut(s) | 1226, 1462, 2699, 3268, 4316, 4661, 5650 |
| BsmAI | GTCTC | 7 cut(s) | 1433, 1675, 2173, 2227, 2949, 3231, 3239 |
| BsmFI | GGGAC | 7 cut(s) | 1226, 1462, 2699, 3268, 4316, 4661, 5650 |
| BsmI | GAATGC | 3 cut(s) | 1598, 4294, 4889 |
| Bso31I | GGTCTC | 1 cut(s) | 3239 |
| Bsp119I | TTCGAA | 1 cut(s) | 3327 |
| Bsp1286I | GDGCHC | 7 cut(s) | 323, 1463, 4107, 4918, 5304, 5406, 5908 |
| Bsp13I | TCCGGA | 2 cut(s) | 76, 5394 |
| Bsp1407I | TGTACA | 3 cut(s) | 187, 748, 2099 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 4455 |
| Bsp19I | CCATGG | 1 cut(s) | 3704 |
| BspACI | CCGC | 4 cut(s) | 355, 1014, 1845, 1866 |
| BspDI | ATCGAT | 1 cut(s) | 3576 |
| BspEI | TCCGGA | 2 cut(s) | 76, 5394 |
| BspHI | TCATGA | 2 cut(s) | 1572, 5725 |
| BspMAI | CTGCAG | 3 cut(s) | 1627, 2681, 3226 |
| BspMI | ACCTGC | 4 cut(s) | 150, 582, 2437, 5532 |
| BspOI | GCTAGC | 3 cut(s) | 204, 912, 4454 |
| BspQI | GCTCTTC | 1 cut(s) | 3801 |
| BspT104I | TTCGAA | 1 cut(s) | 3327 |
| BspT107I | GGYRCC | 2 cut(s) | 64, 3408 |
| BspTNI | GGTCTC | 1 cut(s) | 3239 |
| BsrBI | CCGCTC | 1 cut(s) | 1868 |
| BsrFI | RCCGGY | 2 cut(s) | 67, 1206 |
| BsrGI | TGTACA | 3 cut(s) | 187, 748, 2099 |
| BssAI | RCCGGY | 2 cut(s) | 67, 1206 |
| BssNAI | GTATAC | 3 cut(s) | 2624, 4565, 5794 |
| BssNI | GRCGYC | 1 cut(s) | 2634 |
| Bst1107I | GTATAC | 3 cut(s) | 2624, 4565, 5794 |
| Bst6I | CTCTTC | 5 cut(s) | 2883, 3801, 4707, 4935, 5250 |
| BstACI | GRCGYC | 1 cut(s) | 2634 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 803, 3954, 4922 |
| BstAUI | TGTACA | 3 cut(s) | 187, 748, 2099 |
| BstBI | TTCGAA | 1 cut(s) | 3327 |
| BstDSI | CCRYGG | 2 cut(s) | 1356, 3704 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2749 |
| BstH2I | RGCGCY | 1 cut(s) | 3351 |
| BstHHI | GCGC | 1 cut(s) | 3350 |
| BstMAI | GTCTC | 7 cut(s) | 1433, 1675, 2173, 2227, 2949, 3231, 3239 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 630, 3907 |
| BstSLI | GKGCMC | 2 cut(s) | 1463, 4918 |
| BstV2I | GAAGAC | 3 cut(s) | 1826, 2495, 5588 |
| BstX2I | RGATCY | 7 cut(s) | 1895, 2498, 2513, 3394, 3521, 3737, 5218 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 856, 5763 |
| BstYI | RGATCY | 7 cut(s) | 1895, 2498, 2513, 3394, 3521, 3737, 5218 |
| BstZ17I | GTATAC | 3 cut(s) | 2624, 4565, 5794 |
| Bsu15I | ATCGAT | 1 cut(s) | 3576 |
| BsuI | GTATCC | 2 cut(s) | 1727, 2087 |
| BsuTUI | ATCGAT | 1 cut(s) | 3576 |
| BtgI | CCRYGG | 2 cut(s) | 1356, 3704 |
| BtsI | GCAGTG | 5 cut(s) | 471, 679, 2774, 4129, 5075 |
| BveI | ACCTGC | 4 cut(s) | 150, 582, 2437, 5532 |
| CaiI | CAGNNNCTG | 1 cut(s) | 803 |
| CciI | TCATGA | 2 cut(s) | 1572, 5725 |
| CfoI | GCGC | 1 cut(s) | 3350 |
| Cfr10I | RCCGGY | 2 cut(s) | 67, 1206 |
| Cfr13I | GGNCC | 7 cut(s) | 594, 1128, 1507, 3883, 4675, 4934, 5787 |
| ClaI | ATCGAT | 1 cut(s) | 3576 |
| CpoI | CGGWCCG | 1 cut(s) | 5787 |
| CseI | GACGC | 3 cut(s) | 89, 635, 1459 |
| CsiI | ACCWGGT | 2 cut(s) | 1473, 5503 |
| CspI | CGGWCCG | 1 cut(s) | 5787 |
| DraI | TTTAAA | 1 cut(s) | 1483 |
| DraIII | CACNNNGTG | 3 cut(s) | 3408, 5410, 5507 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1781, 4643 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1781, 4643 |
| EaeI | YGGCCR | 3 cut(s) | 1208, 1993, 4760 |
| Eam1104I | CTCTTC | 5 cut(s) | 2883, 3801, 4707, 4935, 5250 |
| EarI | CTCTTC | 5 cut(s) | 2883, 3801, 4707, 4935, 5250 |
| EciI | GGCGGA | 1 cut(s) | 344 |
| Ecl136II | GAGCTC | 2 cut(s) | 4105, 5302 |
| Eco147I | AGGCCT | 1 cut(s) | 5327 |
| Eco24I | GRGCYC | 2 cut(s) | 4107, 5304 |
| Eco31I | GGTCTC | 1 cut(s) | 3239 |
| Eco47I | GGWCC | 4 cut(s) | 594, 3883, 4675, 5787 |
| Eco53kI | GAGCTC | 2 cut(s) | 4105, 5302 |
| Eco57I | CTGAAG | 3 cut(s) | 1785, 1799, 4688 |
| EcoICRI | GAGCTC | 2 cut(s) | 4105, 5302 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2749 |
| EcoO109I | RGGNCCY | 2 cut(s) | 594, 4675 |
| EcoRI | GAATTC | 2 cut(s) | 4469, 5844 |
| EcoT22I | ATGCAT | 4 cut(s) | 1600, 1656, 3895, 4867 |
| EcoT38I | GRGCYC | 2 cut(s) | 4107, 5304 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2775, 2807, 5573, 5605 |
| FaqI | GGGAC | 7 cut(s) | 1226, 1462, 2699, 3268, 4316, 4661, 5650 |
| FauNDI | CATATG | 4 cut(s) | 1455, 1656, 2563, 3429 |
| FbaI | TGATCA | 2 cut(s) | 303, 4780 |
| FblI | GTMKAC | 5 cut(s) | 2623, 2631, 4564, 5389, 5793 |
| FriOI | GRGCYC | 2 cut(s) | 4107, 5304 |
| GlaI | GCGC | 1 cut(s) | 3349 |
| GsaI | CCCAGC | 1 cut(s) | 4275 |
| GsuI | CTGGAG | 2 cut(s) | 4757, 5087 |
| HaeII | RGCGCY | 1 cut(s) | 3351 |
| HapII | CCGG | 8 cut(s) | 68, 77, 1207, 2435, 4600, 4631, 5395, 5893 |
| HgaI | GACGC | 3 cut(s) | 89, 635, 1459 |
| HhaI | GCGC | 1 cut(s) | 3350 |
| Hin1I | GRCGYC | 1 cut(s) | 2634 |
| Hin6I | GCGC | 1 cut(s) | 3348 |
| HinP1I | GCGC | 1 cut(s) | 3348 |
| HincII | GTYRAC | 9 cut(s) | 124, 625, 2992, 3182, 3912, 4297, 4636, 5390, 5952 |
| HindII | GTYRAC | 9 cut(s) | 124, 625, 2992, 3182, 3912, 4297, 4636, 5390, 5952 |
| HpaII | CCGG | 8 cut(s) | 68, 77, 1207, 2435, 4600, 4631, 5395, 5893 |
| HphI | GGTGA | 9 cut(s) | 722, 989, 1076, 1817, 2403, 3010, 4607, 5324, 5519 |
| HpyCH4IV | ACGT | 5 cut(s) | 312, 2634, 2767, 2962, 4019 |
| HpySE526I | ACGT | 5 cut(s) | 312, 2634, 2767, 2962, 4019 |
| Hsp92I | GRCGYC | 1 cut(s) | 2634 |
| HspAI | GCGC | 1 cut(s) | 3348 |
| KflI | GGGWCCC | 1 cut(s) | 4675 |
| Kpn2I | TCCGGA | 2 cut(s) | 76, 5394 |
| KpnI | GGTACC | 1 cut(s) | 68 |
| KroI | GCCGGC | 1 cut(s) | 1206 |
| KroNI | GCCGGC | 1 cut(s) | 1208 |
| Ksp22I | TGATCA | 2 cut(s) | 303, 4780 |
| LguI | GCTCTTC | 1 cut(s) | 3801 |
| LweI | GCATC | 8 cut(s) | 502, 790, 1530, 2545, 3139, 3902, 3944, 4408 |
| MabI | ACCWGGT | 2 cut(s) | 1473, 5503 |
| MaeII | ACGT | 5 cut(s) | 312, 2634, 2767, 2962, 4019 |
| MbiI | CCGCTC | 1 cut(s) | 1868 |
| MfeI | CAATTG | 5 cut(s) | 500, 2160, 2382, 5034, 5745 |
| MflI | RGATCY | 7 cut(s) | 1895, 2498, 2513, 3394, 3521, 3737, 5218 |
| MhlI | GDGCHC | 7 cut(s) | 323, 1463, 4107, 4918, 5304, 5406, 5908 |
| MlsI | TGGCCA | 2 cut(s) | 1995, 4762 |
| MluNI | TGGCCA | 2 cut(s) | 1995, 4762 |
| MlyI | GAGTC | 9 cut(s) | 67, 211, 1156, 1435, 2930, 2987, 4361, 4748, 5385 |
| MmeI | TCCRAC | 6 cut(s) | 353, 669, 3402, 3441, 4627, 4708 |
| Mox20I | TGGCCA | 2 cut(s) | 1995, 4762 |
| Mph1103I | ATGCAT | 4 cut(s) | 1600, 1656, 3895, 4867 |
| MroI | TCCGGA | 2 cut(s) | 76, 5394 |
| MroNI | GCCGGC | 1 cut(s) | 1206 |
| MroXI | GAANNNNTTC | 5 cut(s) | 963, 1812, 3633, 4053, 4701 |
| MscI | TGGCCA | 2 cut(s) | 1995, 4762 |
| MslI | CAYNNNNRTG | 8 cut(s) | 464, 1655, 1758, 1966, 2354, 3984, 5009, 5069 |
| Msp20I | TGGCCA | 2 cut(s) | 1995, 4762 |
| MspI | CCGG | 8 cut(s) | 68, 77, 1207, 2435, 4600, 4631, 5395, 5893 |
| MunI | CAATTG | 5 cut(s) | 500, 2160, 2382, 5034, 5745 |
| Mva1269I | GAATGC | 3 cut(s) | 1598, 4294, 4889 |
| NaeI | GCCGGC | 1 cut(s) | 1208 |
| NciI | CCSGG | 2 cut(s) | 2436, 4631 |
| NcoI | CCATGG | 1 cut(s) | 3704 |
| NdeI | CATATG | 4 cut(s) | 1455, 1656, 2563, 3429 |
| NgoMIV | GCCGGC | 1 cut(s) | 1206 |
| NheI | GCTAGC | 3 cut(s) | 200, 908, 4450 |
| NmeAIII | GCCGAG | 1 cut(s) | 5005 |
| NsiI | ATGCAT | 4 cut(s) | 1600, 1656, 3895, 4867 |
| NspV | TTCGAA | 1 cut(s) | 3327 |
| OliI | CACNNNNGTG | 1 cut(s) | 2354 |
| PaeI | GCATGC | 2 cut(s) | 2941, 4081 |
| PagI | TCATGA | 2 cut(s) | 1572, 5725 |
| PaqCI | CACCTGC | 2 cut(s) | 150, 5532 |
| PceI | AGGCCT | 1 cut(s) | 5327 |
| PciI | ACATGT | 5 cut(s) | 1684, 2390, 3675, 4305, 5316 |
| PciSI | GCTCTTC | 1 cut(s) | 3801 |
| PctI | GAATGC | 3 cut(s) | 1598, 4294, 4889 |
| PdiI | GCCGGC | 1 cut(s) | 1208 |
| PdmI | GAANNNNTTC | 5 cut(s) | 963, 1812, 3633, 4053, 4701 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 3159, 3689, 5687 |
| PfoI | TCCNGGA | 2 cut(s) | 2602, 4464 |
| PleI | GAGTC | 9 cut(s) | 67, 211, 1156, 1435, 2929, 2987, 4361, 4747, 5385 |
| PpsI | GAGTC | 9 cut(s) | 67, 211, 1156, 1435, 2929, 2987, 4361, 4747, 5385 |
| PpuMI | RGGWCCY | 2 cut(s) | 594, 4675 |
| PscI | ACATGT | 5 cut(s) | 1684, 2390, 3675, 4305, 5316 |
| PshAI | GACNNNNGTC | 2 cut(s) | 630, 3907 |
| PsiI | TTATAA | 1 cut(s) | 4391 |
| Psp124BI | GAGCTC | 2 cut(s) | 4107, 5304 |
| Psp5II | RGGWCCY | 2 cut(s) | 594, 4675 |
| PspFI | CCCAGC | 1 cut(s) | 4271 |
| PspPI | GGNCC | 7 cut(s) | 594, 1128, 1507, 3883, 4675, 4934, 5787 |
| PspPPI | RGGWCCY | 2 cut(s) | 594, 4675 |
| PstI | CTGCAG | 3 cut(s) | 1627, 2681, 3226 |
| PstNI | CAGNNNCTG | 1 cut(s) | 803 |
| PsuI | RGATCY | 7 cut(s) | 1895, 2498, 2513, 3394, 3521, 3737, 5218 |
| RseI | CAYNNNNRTG | 8 cut(s) | 464, 1655, 1758, 1966, 2354, 3984, 5009, 5069 |
| Rsr2I | CGGWCCG | 1 cut(s) | 5787 |
| RsrII | CGGWCCG | 1 cut(s) | 5787 |
| SacI | GAGCTC | 2 cut(s) | 4107, 5304 |
| SalI | GTCGAC | 1 cut(s) | 5388 |
| SapI | GCTCTTC | 1 cut(s) | 3801 |
| Sau96I | GGNCC | 7 cut(s) | 594, 1128, 1507, 3883, 4675, 4934, 5787 |
| ScaI | AGTACT | 2 cut(s) | 1860, 5116 |
| SchI | GAGTC | 9 cut(s) | 67, 211, 1156, 1435, 2930, 2987, 4361, 4748, 5385 |
| SduI | GDGCHC | 7 cut(s) | 323, 1463, 4107, 4918, 5304, 5406, 5908 |
| SexAI | ACCWGGT | 2 cut(s) | 1473, 5503 |
| SfaNI | GCATC | 8 cut(s) | 502, 790, 1530, 2545, 3139, 3902, 3944, 4408 |
| SfuI | TTCGAA | 1 cut(s) | 3327 |
| SinI | GGWCC | 4 cut(s) | 594, 3883, 4675, 5787 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 464, 1655, 1758, 1966, 2354, 3984, 5009, 5069 |
| SmlI | CTYRAG | 5 cut(s) | 618, 685, 1443, 3315, 3864 |
| SmoI | CTYRAG | 5 cut(s) | 618, 685, 1443, 3315, 3864 |
| SphI | GCATGC | 2 cut(s) | 2941, 4081 |
| SseBI | AGGCCT | 1 cut(s) | 5327 |
| SsiI | CCGC | 4 cut(s) | 355, 1014, 1845, 1866 |
| SspI | AATATT | 3 cut(s) | 3510, 3850, 4246 |
| SstI | GAGCTC | 2 cut(s) | 4107, 5304 |
| StuI | AGGCCT | 1 cut(s) | 5327 |
| TaiI | ACGT | 5 cut(s) | 315, 2637, 2770, 2965, 4022 |
| TaqI | TCGA | 7 cut(s) | 1789, 2510, 3327, 3576, 5344, 5389, 5834 |
| TatI | WGTACW | 6 cut(s) | 187, 329, 748, 1858, 2099, 5114 |
| TauI | GCSGC | 1 cut(s) | 1848 |
| TspGWI | ACGGA | 5 cut(s) | 81, 1904, 2069, 3272, 5800 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 3159, 3689, 5687 |
| VneI | GTGCAC | 1 cut(s) | 4914 |
| VpaK11BI | GGWCC | 4 cut(s) | 594, 3883, 4675, 5787 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2749 |
| XbaI | TCTAGA | 1 cut(s) | 1333 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3494 |
| XmiI | GTMKAC | 5 cut(s) | 2623, 2631, 4564, 5389, 5793 |
| XmnI | GAANNNNTTC | 5 cut(s) | 963, 1812, 3633, 4053, 4701 |
| ZraI | GACGTC | 1 cut(s) | 2635 |
| ZrmI | AGTACT | 2 cut(s) | 1860, 5116 |
| Zsp2I | ATGCAT | 4 cut(s) | 1600, 1656, 3895, 4867 |