Transcriptional activator
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G04560 AT5G04560 AT5G04560 |
| fragaria_vesca | FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 FvH4_2g10170 |
| malus_domestica | MD02G1245300.v1.1 MD07G1071800.v1.1 MD09G1259000.v1.1 MD09G1259100.v1.1 MD17G1253500.v1.1 MD17G1253600.v1.1 |
| prunus_persica | Prupe.2G089400_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 Prupe.7G005000_v2.0.a1 |
| pyrus_communis | pycom02g21110 pycom09g17380 pycom17g25620 pycom17g25630 |
| rosa_chinensis | RchiOBHm_Chr6g0267351 RchiOBHm_Chr6g0267361 |
| rosa_laevigata | RLG00000014013 |
| rosa_multiflora | Rmu_sc0000746.1_g000002 Rmu_sc0019664.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00200830 |
| rosa_rugosa | Rorug06G0031600 Rorug06G0031700 Rorug06G0031800 Rorug06G0031900 Rorug06G0032000 |
| rosa_samantha | Rh6AG153500 Rh6BG153200 Rh6CG149300 Rh6DG137600 |
| rosa_wichuraiana | Rw6G013200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1442, 5415 |
| Acc36I | ACCTGC | 5 cut(s) | 1442, 2292, 2546, 4985, 5415 |
| AccB1I | GGYRCC | 2 cut(s) | 3453, 4618 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3204, 3731 |
| AccI | GTMKAC | 2 cut(s) | 4831, 5272 |
| AciI | CCGC | 7 cut(s) | 734, 1166, 2360, 2373, 2573, 4967, 5430 |
| AcoI | YGGCCR | 2 cut(s) | 2056, 4703 |
| AcuI | CTGAAG | 4 cut(s) | 1845, 1859, 3288, 5279 |
| AdeI | CACNNNGTG | 3 cut(s) | 3453, 5293, 5390 |
| AfaI | GTAC | 7 cut(s) | 5, 1106, 1917, 2670, 3684, 4670, 4999 |
| AflII | CTTAAG | 2 cut(s) | 3107, 3841 |
| AflIII | ACRYGT | 3 cut(s) | 1744, 3488, 5199 |
| AgeI | ACCGGT | 2 cut(s) | 6, 2158 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 911, 943 |
| Alw21I | GWGCWC | 6 cut(s) | 659, 1405, 3416, 3954, 5187, 5289 |
| Alw26I | GTCTC | 6 cut(s) | 1735, 2976, 3284, 3481, 3598, 4676 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 3731, 4079, 5000 |
| Ama87I | CYCGRG | 4 cut(s) | 250, 331, 589, 3415 |
| AoxI | GGCC | 9 cut(s) | 1199, 1550, 2056, 2804, 2938, 3788, 4703, 4877, 5208 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1551, 1572, 1583, 1604 |
| AsiGI | ACCGGT | 2 cut(s) | 6, 2158 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1035, 1872, 4098 |
| AspLEI | GCGC | 2 cut(s) | 4267, 4859 |
| AspS9I | GGNCC | 8 cut(s) | 1200, 1519, 2543, 2805, 3510, 3928, 4877, 5101 |
| AsuC2I | CCSGG | 5 cut(s) | 90, 590, 591, 2825, 4574 |
| AsuNHI | GCTAGC | 1 cut(s) | 4393 |
| AvaI | CYCGRG | 4 cut(s) | 250, 331, 589, 3415 |
| AvaII | GGWCC | 5 cut(s) | 1519, 2543, 3510, 3928, 5101 |
| AxyI | CCTNAGG | 1 cut(s) | 3295 |
| BaeGI | GKGCMC | 1 cut(s) | 4623 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 5049, 5082 |
| BalI | TGGCCA | 2 cut(s) | 2058, 4705 |
| BamHI | GGATCC | 4 cut(s) | 140, 1958, 3566, 3649 |
| BanI | GGYRCC | 2 cut(s) | 3453, 4618 |
| BanII | GRGCYC | 3 cut(s) | 1405, 3422, 5187 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2632, 2664 |
| BbsI | GAAGAC | 2 cut(s) | 3219, 5476 |
| Bbv12I | GWGCWC | 6 cut(s) | 659, 1405, 3416, 3954, 5187, 5289 |
| BceAI | ACGGC | 1 cut(s) | 2819 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4293, 4327 |
| BciVI | GTATCC | 2 cut(s) | 1787, 3945 |
| BclI | TGATCA | 1 cut(s) | 4723 |
| BcnI | CCSGG | 5 cut(s) | 90, 590, 591, 2825, 4574 |
| BcoDI | GTCTC | 6 cut(s) | 1735, 2976, 3284, 3481, 3598, 4676 |
| BfaI | CTAG | 7 cut(s) | 17, 1406, 1860, 2019, 2447, 4394, 5372 |
| BfmI | CTRYAG | 4 cut(s) | 1020, 1086, 4018, 4646 |
| BfrI | CTTAAG | 2 cut(s) | 3107, 3841 |
| BfuAI | ACCTGC | 5 cut(s) | 1442, 2292, 2546, 4985, 5415 |
| BfuI | GTATCC | 2 cut(s) | 1787, 3945 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1672 |
| BglII | AGATCT | 1 cut(s) | 2364 |
| BlpI | GCTNAGC | 1 cut(s) | 2072 |
| Bme18I | GGWCC | 5 cut(s) | 1519, 2543, 3510, 3928, 5101 |
| BmeT110I | CYCGRG | 4 cut(s) | 250, 331, 589, 3415 |
| BmgT120I | GGNCC | 8 cut(s) | 1200, 1519, 2543, 2805, 3510, 3928, 4877, 5101 |
| BmrI | ACTGGG | 5 cut(s) | 1346, 2489, 3459, 4252, 4619 |
| BmtI | GCTAGC | 1 cut(s) | 4397 |
| BmuI | ACTGGG | 5 cut(s) | 1346, 2489, 3459, 4252, 4619 |
| BpiI | GAAGAC | 2 cut(s) | 3219, 5476 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4964, 4996 |
| BpmI | CTGGAG | 2 cut(s) | 4700, 4970 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2072 |
| BpuEI | CTTGAG | 8 cut(s) | 20, 157, 669, 1488, 2382, 3345, 3372, 3894 |
| BpuMI | CCSGG | 5 cut(s) | 90, 590, 591, 2825, 4574 |
| Bsa29I | ATCGAT | 3 cut(s) | 3621, 4449, 5443 |
| BsaBI | GATNNNNATC | 4 cut(s) | 741, 2058, 2224, 5313 |
| BsaI | GGTCTC | 1 cut(s) | 3284 |
| BsaWI | WCCGGW | 2 cut(s) | 6, 2158 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 833, 863, 4174, 4204 |
| Bse118I | RCCGGY | 2 cut(s) | 6, 2158 |
| Bse21I | CCTNAGG | 1 cut(s) | 3295 |
| Bse3DI | GCAATG | 6 cut(s) | 132, 631, 2955, 4311, 4810, 5469 |
| Bse8I | GATNNNNATC | 4 cut(s) | 741, 2058, 2224, 5313 |
| BseCI | ATCGAT | 3 cut(s) | 3621, 4449, 5443 |
| BseJI | GATNNNNATC | 4 cut(s) | 741, 2058, 2224, 5313 |
| BseMI | GCAATG | 6 cut(s) | 132, 631, 2955, 4311, 4810, 5469 |
| BseRI | GAGGAG | 3 cut(s) | 2180, 4836, 4903 |
| BseSI | GKGCMC | 1 cut(s) | 4623 |
| BsgI | GTGCAG | 3 cut(s) | 1606, 2781, 3078 |
| BshFI | GGCC | 9 cut(s) | 1201, 1552, 2058, 2806, 2940, 3790, 4705, 4879, 5210 |
| BshNI | GGYRCC | 2 cut(s) | 3453, 4618 |
| BshTI | ACCGGT | 2 cut(s) | 6, 2158 |
| BshVI | ATCGAT | 3 cut(s) | 3621, 4449, 5443 |
| BsiHKAI | GWGCWC | 6 cut(s) | 659, 1405, 3416, 3954, 5187, 5289 |
| BsiHKCI | CYCGRG | 4 cut(s) | 250, 331, 589, 3415 |
| BsiSI | CCGG | 7 cut(s) | 7, 89, 590, 2159, 2825, 4543, 4574 |
| BsmAI | GTCTC | 6 cut(s) | 1735, 2976, 3284, 3481, 3598, 4676 |
| BsmI | GAATGC | 3 cut(s) | 2073, 4237, 4410 |
| BsnI | GGCC | 9 cut(s) | 1201, 1552, 2058, 2806, 2940, 3790, 4705, 4879, 5210 |
| Bso31I | GGTCTC | 1 cut(s) | 3284 |
| BsoBI | CYCGRG | 4 cut(s) | 250, 331, 589, 3415 |
| Bsp1286I | GDGCHC | 8 cut(s) | 659, 1405, 3416, 3422, 3954, 4623, 5187, 5289 |
| Bsp1407I | TGTACA | 1 cut(s) | 2668 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2072 |
| Bsp19I | CCATGG | 1 cut(s) | 1428 |
| BspACI | CCGC | 7 cut(s) | 734, 1166, 2360, 2373, 2573, 4967, 5430 |
| BspANI | GGCC | 9 cut(s) | 1201, 1552, 2058, 2806, 2940, 3790, 4705, 4879, 5210 |
| BspDI | ATCGAT | 3 cut(s) | 3621, 4449, 5443 |
| BspMAI | CTGCAG | 2 cut(s) | 1090, 4650 |
| BspMI | ACCTGC | 5 cut(s) | 1442, 2292, 2546, 4985, 5415 |
| BspOI | GCTAGC | 1 cut(s) | 4397 |
| BspQI | GCTCTTC | 1 cut(s) | 5025 |
| BspT107I | GGYRCC | 2 cut(s) | 3453, 4618 |
| BspTI | CTTAAG | 2 cut(s) | 3107, 3841 |
| BspTNI | GGTCTC | 1 cut(s) | 3284 |
| BsrDI | GCAATG | 6 cut(s) | 132, 631, 2955, 4311, 4810, 5469 |
| BsrFI | RCCGGY | 2 cut(s) | 6, 2158 |
| BsrGI | TGTACA | 1 cut(s) | 2668 |
| BssAI | RCCGGY | 2 cut(s) | 6, 2158 |
| Bst6I | CTCTTC | 7 cut(s) | 1283, 1633, 1944, 2910, 4878, 5025, 5133 |
| BstAFI | CTTAAG | 2 cut(s) | 3107, 3841 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4865 |
| BstAUI | TGTACA | 1 cut(s) | 2668 |
| BstDSI | CCRYGG | 2 cut(s) | 1428, 2801 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4194 |
| BstHHI | GCGC | 2 cut(s) | 4267, 4859 |
| BstMAI | GTCTC | 6 cut(s) | 1735, 2976, 3284, 3481, 3598, 4676 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 230, 1672, 1850, 1869, 4865, 5041, 5216, 5430, 5483 |
| BstSFI | CTRYAG | 4 cut(s) | 1020, 1086, 4018, 4646 |
| BstSLI | GKGCMC | 1 cut(s) | 4623 |
| BstV2I | GAAGAC | 2 cut(s) | 3219, 5476 |
| BstX2I | RGATCY | 7 cut(s) | 140, 1923, 1958, 2364, 3439, 3566, 3649 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3747 |
| BstYI | RGATCY | 7 cut(s) | 140, 1923, 1958, 2364, 3439, 3566, 3649 |
| Bsu15I | ATCGAT | 3 cut(s) | 3621, 4449, 5443 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3295 |
| BsuI | GTATCC | 2 cut(s) | 1787, 3945 |
| BsuRI | GGCC | 9 cut(s) | 1201, 1552, 2058, 2806, 2940, 3790, 4705, 4879, 5210 |
| BsuTUI | ATCGAT | 3 cut(s) | 3621, 4449, 5443 |
| BtgI | CCRYGG | 2 cut(s) | 1428, 2801 |
| BtsI | GCAGTG | 4 cut(s) | 1870, 3871, 4643, 4958 |
| BveI | ACCTGC | 5 cut(s) | 1442, 2292, 2546, 4985, 5415 |
| CaiI | CAGNNNCTG | 3 cut(s) | 3731, 4079, 5000 |
| CfoI | GCGC | 2 cut(s) | 4267, 4859 |
| Cfr10I | RCCGGY | 2 cut(s) | 6, 2158 |
| Cfr13I | GGNCC | 8 cut(s) | 1200, 1519, 2543, 2805, 3510, 3928, 4877, 5101 |
| Cfr9I | CCCGGG | 1 cut(s) | 589 |
| ClaI | ATCGAT | 3 cut(s) | 3621, 4449, 5443 |
| CseI | GACGC | 2 cut(s) | 881, 4370 |
| CsiI | ACCWGGT | 1 cut(s) | 5386 |
| Csp6I | GTAC | 7 cut(s) | 4, 1105, 1916, 2669, 3683, 4669, 4998 |
| CspAI | ACCGGT | 2 cut(s) | 6, 2158 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 501, 536, 1435, 1470 |
| CviQI | GTAC | 7 cut(s) | 4, 1105, 1916, 2669, 3683, 4669, 4998 |
| DraI | TTTAAA | 2 cut(s) | 1543, 3586 |
| DraIII | CACNNNGTG | 3 cut(s) | 3453, 5293, 5390 |
| EaeI | YGGCCR | 2 cut(s) | 2056, 4703 |
| Eam1104I | CTCTTC | 7 cut(s) | 1283, 1633, 1944, 2910, 4878, 5025, 5133 |
| EarI | CTCTTC | 7 cut(s) | 1283, 1633, 1944, 2910, 4878, 5025, 5133 |
| EciI | GGCGGA | 1 cut(s) | 4956 |
| Ecl136II | GAGCTC | 2 cut(s) | 1403, 5185 |
| Eco147I | AGGCCT | 1 cut(s) | 5210 |
| Eco24I | GRGCYC | 3 cut(s) | 1405, 3422, 5187 |
| Eco31I | GGTCTC | 1 cut(s) | 3284 |
| Eco32I | GATATC | 1 cut(s) | 2083 |
| Eco47I | GGWCC | 5 cut(s) | 1519, 2543, 3510, 3928, 5101 |
| Eco53kI | GAGCTC | 2 cut(s) | 1403, 5185 |
| Eco57I | CTGAAG | 4 cut(s) | 1845, 1859, 3288, 5279 |
| Eco81I | CCTNAGG | 1 cut(s) | 3295 |
| Eco88I | CYCGRG | 4 cut(s) | 250, 331, 589, 3415 |
| EcoICRI | GAGCTC | 2 cut(s) | 1403, 5185 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4194 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2543, 3928, 5101 |
| EcoRI | GAATTC | 2 cut(s) | 959, 4412 |
| EcoRV | GATATC | 1 cut(s) | 2083 |
| EcoT22I | ATGCAT | 3 cut(s) | 1716, 2970, 4810 |
| EcoT38I | GRGCYC | 3 cut(s) | 1405, 3422, 5187 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2573, 2605, 2802, 2834, 5461, 5493 |
| FauI | CCCGC | 1 cut(s) | 2580 |
| FauNDI | CATATG | 1 cut(s) | 3559 |
| FbaI | TGATCA | 1 cut(s) | 4723 |
| FblI | GTMKAC | 2 cut(s) | 4831, 5272 |
| FriOI | GRGCYC | 3 cut(s) | 1405, 3422, 5187 |
| FspBI | CTAG | 7 cut(s) | 17, 1406, 1860, 2019, 2447, 4394, 5372 |
| GlaI | GCGC | 2 cut(s) | 4266, 4858 |
| GsuI | CTGGAG | 2 cut(s) | 4700, 4970 |
| HaeIII | GGCC | 9 cut(s) | 1201, 1552, 2058, 2806, 2940, 3790, 4705, 4879, 5210 |
| HapII | CCGG | 7 cut(s) | 7, 89, 590, 2159, 2825, 4543, 4574 |
| HgaI | GACGC | 2 cut(s) | 881, 4370 |
| HhaI | GCGC | 2 cut(s) | 4267, 4859 |
| Hin6I | GCGC | 2 cut(s) | 4265, 4857 |
| HinP1I | GCGC | 2 cut(s) | 4265, 4857 |
| HpaII | CCGG | 7 cut(s) | 7, 89, 590, 2159, 2825, 4543, 4574 |
| Hpy99I | CGWCG | 1 cut(s) | 3671 |
| HpyCH4IV | ACGT | 3 cut(s) | 2092, 2794, 2989 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 230, 1672, 1850, 1869, 4865, 5041, 5216, 5430, 5483 |
| HpySE526I | ACGT | 3 cut(s) | 2092, 2794, 2989 |
| HspAI | GCGC | 2 cut(s) | 4265, 4857 |
| KflI | GGGWCCC | 1 cut(s) | 2543 |
| Ksp22I | TGATCA | 1 cut(s) | 4723 |
| LguI | GCTCTTC | 1 cut(s) | 5025 |
| LmnI | GCTCC | 6 cut(s) | 3425, 4372, 4890, 5182, 5190, 5438 |
| MabI | ACCWGGT | 1 cut(s) | 5386 |
| MaeI | CTAG | 7 cut(s) | 17, 1406, 1860, 2019, 2447, 4394, 5372 |
| MaeII | ACGT | 3 cut(s) | 2092, 2794, 2989 |
| MfeI | CAATTG | 2 cut(s) | 2048, 2427 |
| MflI | RGATCY | 7 cut(s) | 140, 1923, 1958, 2364, 3439, 3566, 3649 |
| MhlI | GDGCHC | 8 cut(s) | 659, 1405, 3416, 3422, 3954, 4623, 5187, 5289 |
| MlsI | TGGCCA | 2 cut(s) | 2058, 4705 |
| MluNI | TGGCCA | 2 cut(s) | 2058, 4705 |
| MlyI | GAGTC | 7 cut(s) | 119, 323, 452, 1085, 1274, 3014, 4304 |
| MmeI | TCCRAC | 5 cut(s) | 158, 735, 3447, 4570, 4651 |
| Mox20I | TGGCCA | 2 cut(s) | 2058, 4705 |
| Mph1103I | ATGCAT | 3 cut(s) | 1716, 2970, 4810 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1035, 1872, 4098 |
| MscI | TGGCCA | 2 cut(s) | 2058, 4705 |
| MslI | CAYNNNNRTG | 5 cut(s) | 216, 1818, 2380, 3630, 4952 |
| Msp20I | TGGCCA | 2 cut(s) | 2058, 4705 |
| MspCI | CTTAAG | 2 cut(s) | 3107, 3841 |
| MspI | CCGG | 7 cut(s) | 7, 89, 590, 2159, 2825, 4543, 4574 |
| MunI | CAATTG | 2 cut(s) | 2048, 2427 |
| Mva1269I | GAATGC | 3 cut(s) | 2073, 4237, 4410 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 230, 1672, 1850, 1869, 4865, 5041, 5216, 5430, 5483 |
| NciI | CCSGG | 5 cut(s) | 90, 590, 591, 2825, 4574 |
| NcoI | CCATGG | 1 cut(s) | 1428 |
| NdeI | CATATG | 1 cut(s) | 3559 |
| NheI | GCTAGC | 1 cut(s) | 4393 |
| NmeAIII | GCCGAG | 2 cut(s) | 2966, 4948 |
| NsiI | ATGCAT | 3 cut(s) | 1716, 2970, 4810 |
| PaeI | GCATGC | 2 cut(s) | 2968, 4126 |
| PaqCI | CACCTGC | 2 cut(s) | 1442, 5415 |
| PasI | CCCWGGG | 1 cut(s) | 1897 |
| PceI | AGGCCT | 1 cut(s) | 5210 |
| PciI | ACATGT | 3 cut(s) | 1744, 3488, 5199 |
| PciSI | GCTCTTC | 1 cut(s) | 5025 |
| PctI | GAATGC | 3 cut(s) | 2073, 4237, 4410 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1035, 1872, 4098 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3204, 3731 |
| PfoI | TCCNGGA | 1 cut(s) | 1603 |
| PinAI | ACCGGT | 2 cut(s) | 6, 2158 |
| PleI | GAGTC | 7 cut(s) | 119, 323, 452, 1084, 1273, 3014, 4304 |
| PpsI | GAGTC | 7 cut(s) | 119, 323, 452, 1084, 1273, 3014, 4304 |
| PpuMI | RGGWCCY | 3 cut(s) | 2543, 3928, 5101 |
| PscI | ACATGT | 3 cut(s) | 1744, 3488, 5199 |
| Psp124BI | GAGCTC | 2 cut(s) | 1405, 5187 |
| Psp5II | RGGWCCY | 3 cut(s) | 2543, 3928, 5101 |
| PspPI | GGNCC | 8 cut(s) | 1200, 1519, 2543, 2805, 3510, 3928, 4877, 5101 |
| PspPPI | RGGWCCY | 3 cut(s) | 2543, 3928, 5101 |
| PstI | CTGCAG | 2 cut(s) | 1090, 4650 |
| PstNI | CAGNNNCTG | 3 cut(s) | 3731, 4079, 5000 |
| PsuI | RGATCY | 7 cut(s) | 140, 1923, 1958, 2364, 3439, 3566, 3649 |
| RsaI | GTAC | 7 cut(s) | 5, 1106, 1917, 2670, 3684, 4670, 4999 |
| RsaNI | GTAC | 7 cut(s) | 4, 1105, 1916, 2669, 3683, 4669, 4998 |
| RseI | CAYNNNNRTG | 5 cut(s) | 216, 1818, 2380, 3630, 4952 |
| SacI | GAGCTC | 2 cut(s) | 1405, 5187 |
| SalI | GTCGAC | 1 cut(s) | 4830 |
| SapI | GCTCTTC | 1 cut(s) | 5025 |
| Sau96I | GGNCC | 8 cut(s) | 1200, 1519, 2543, 2805, 3510, 3928, 4877, 5101 |
| SchI | GAGTC | 7 cut(s) | 119, 323, 452, 1085, 1274, 3014, 4304 |
| SduI | GDGCHC | 8 cut(s) | 659, 1405, 3416, 3422, 3954, 4623, 5187, 5289 |
| SexAI | ACCWGGT | 1 cut(s) | 5386 |
| SfcI | CTRYAG | 4 cut(s) | 1020, 1086, 4018, 4646 |
| SinI | GGWCC | 5 cut(s) | 1519, 2543, 3510, 3928, 5101 |
| SmaI | CCCGGG | 1 cut(s) | 591 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 216, 1818, 2380, 3630, 4952 |
| SphI | GCATGC | 2 cut(s) | 2968, 4126 |
| SseBI | AGGCCT | 1 cut(s) | 5210 |
| SsiI | CCGC | 7 cut(s) | 734, 1166, 2360, 2373, 2573, 4967, 5430 |
| SspI | AATATT | 3 cut(s) | 1891, 2181, 3814 |
| SspMI | CTAG | 7 cut(s) | 17, 1406, 1860, 2019, 2447, 4394, 5372 |
| SstI | GAGCTC | 2 cut(s) | 1405, 5187 |
| StuI | AGGCCT | 1 cut(s) | 5210 |
| TaiI | ACGT | 3 cut(s) | 2095, 2797, 2992 |
| TaqII | GACCGA | 1 cut(s) | 5075 |
| TatI | WGTACW | 2 cut(s) | 1915, 2668 |
| TauI | GCSGC | 1 cut(s) | 5433 |
| TspGWI | ACGGA | 1 cut(s) | 3927 |
| TspMI | CCCGGG | 1 cut(s) | 589 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3204, 3731 |
| Vha464I | CTTAAG | 2 cut(s) | 3107, 3841 |
| VpaK11BI | GGWCC | 5 cut(s) | 1519, 2543, 3510, 3928, 5101 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4194 |
| XbaI | TCTAGA | 1 cut(s) | 1405 |
| XmaI | CCCGGG | 1 cut(s) | 589 |
| XmiI | GTMKAC | 2 cut(s) | 4831, 5272 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1035, 1872, 4098 |
| XspI | CTAG | 7 cut(s) | 17, 1406, 1860, 2019, 2447, 4394, 5372 |
| Zsp2I | ATGCAT | 3 cut(s) | 1716, 2970, 4810 |