Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G03220 AT5G03500 AT5G03500 AT5G03500 AT5G03500 AT5G03500 AT5G03500 AT5G03500 |
| fragaria_vesca | FvH4_6g21430 |
| malus_domestica | MD12G1050700.v1.1 MD14G1049500.v1.1 |
| prunus_persica | Prupe.1G035300_v2.0.a1 Prupe.1G181600_v2.0.a1 Prupe.1G181600_v2.0.a1 Prupe.1G300700_v2.0.a1 Prupe.1G547000_v2.0.a1 Prupe.2G085900_v2.0.a1 Prupe.2G085900_v2.0.a1 Prupe.3G021700_v2.0.a1 Prupe.6G266300_v2.0.a1 Prupe.7G024200_v2.0.a1 Prupe.7G086000_v2.0.a1 Prupe.8G249100_v2.0.a1 |
| pyrus_communis | pycom14g04050 |
| rosa_chinensis | RchiOBHm_Chr3g0478001 RchiOBHm_Chr4g0406251 |
| rosa_laevigata | RLG00000008785 |
| rosa_multiflora | Rmu_sc0008653.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00350990 Rroxscaffold_6G00403530 |
| rosa_rugosa | Rorug04G0067200 Rorug04G0067200 |
| rosa_samantha | Rh3BG249000 Rh3CG244400 Rh4AG136700 Rh4BG134200 Rh4CG144900 Rh4DG131400 |
| rosa_wichuraiana | Rw3G019660 Rw4G011080 Rw4G011220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 1 cut(s) | 323 |
| AgsI | TTSAA | 1 cut(s) | 265 |
| AluBI | AGCT | 4 cut(s) | 90, 181, 308, 362 |
| AluI | AGCT | 4 cut(s) | 90, 181, 308, 362 |
| Alw26I | GTCTC | 2 cut(s) | 211, 394 |
| AoxI | GGCC | 2 cut(s) | 3, 127 |
| ApeKI | GCWGC | 2 cut(s) | 178, 181 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 431 |
| AspS9I | GGNCC | 1 cut(s) | 128 |
| AsuII | TTCGAA | 1 cut(s) | 93 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BauI | CACGAG | 1 cut(s) | 232 |
| BbvI | GCAGC | 2 cut(s) | 168, 190 |
| BccI | CCATC | 4 cut(s) | 34, 190, 229, 309 |
| BciVI | GTATCC | 1 cut(s) | 129 |
| BcoDI | GTCTC | 2 cut(s) | 211, 394 |
| BfaI | CTAG | 2 cut(s) | 309, 332 |
| BfuI | GTATCC | 1 cut(s) | 129 |
| BisI | GCNGC | 2 cut(s) | 179, 182 |
| BlsI | GCNGC | 2 cut(s) | 180, 183 |
| BmgT120I | GGNCC | 1 cut(s) | 128 |
| BmsI | GCATC | 1 cut(s) | 283 |
| BpmI | CTGGAG | 1 cut(s) | 36 |
| Bpu14I | TTCGAA | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 1 cut(s) | 392 |
| BsaI | GGTCTC | 1 cut(s) | 211 |
| Bse3DI | GCAATG | 2 cut(s) | 290, 321 |
| BseMI | GCAATG | 2 cut(s) | 290, 321 |
| BseMII | CTCAG | 1 cut(s) | 146 |
| BseRI | GAGGAG | 3 cut(s) | 250, 394, 397 |
| BseXI | GCAGC | 2 cut(s) | 168, 190 |
| BsgI | GTGCAG | 1 cut(s) | 167 |
| BshFI | GGCC | 2 cut(s) | 5, 129 |
| BslFI | GGGAC | 1 cut(s) | 282 |
| BsmAI | GTCTC | 2 cut(s) | 211, 394 |
| BsmFI | GGGAC | 1 cut(s) | 282 |
| BsnI | GGCC | 2 cut(s) | 5, 129 |
| Bso31I | GGTCTC | 1 cut(s) | 211 |
| Bsp119I | TTCGAA | 1 cut(s) | 93 |
| Bsp143I | GATC | 1 cut(s) | 97 |
| BspANI | GGCC | 2 cut(s) | 5, 129 |
| BspCNI | CTCAG | 1 cut(s) | 147 |
| BspT104I | TTCGAA | 1 cut(s) | 93 |
| BspTNI | GGTCTC | 1 cut(s) | 211 |
| BsrDI | GCAATG | 2 cut(s) | 290, 321 |
| BssMI | GATC | 1 cut(s) | 97 |
| BssSI | CACGAG | 1 cut(s) | 232 |
| Bst2BI | CACGAG | 1 cut(s) | 232 |
| Bst4CI | ACNGT | 1 cut(s) | 117 |
| BstBI | TTCGAA | 1 cut(s) | 93 |
| BstDEI | CTNAG | 2 cut(s) | 38, 155 |
| BstKTI | GATC | 1 cut(s) | 100 |
| BstMAI | GTCTC | 2 cut(s) | 211, 394 |
| BstMBI | GATC | 1 cut(s) | 97 |
| BstV1I | GCAGC | 2 cut(s) | 168, 190 |
| BsuI | GTATCC | 1 cut(s) | 129 |
| BsuRI | GGCC | 2 cut(s) | 5, 129 |
| Cfr13I | GGNCC | 1 cut(s) | 128 |
| CseI | GACGC | 2 cut(s) | 98, 284 |
| CviJI | RGCY | 7 cut(s) | 5, 90, 129, 181, 200, 308, 362 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 90, 129, 181, 200, 308, 362 |
| DdeI | CTNAG | 2 cut(s) | 38, 155 |
| DpnI | GATC | 1 cut(s) | 99 |
| DpnII | GATC | 1 cut(s) | 97 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco31I | GGTCTC | 1 cut(s) | 211 |
| Eco57I | CTGAAG | 1 cut(s) | 323 |
| FaiI | YATR | 3 cut(s) | 66, 251, 374 |
| FaqI | GGGAC | 1 cut(s) | 282 |
| Fnu4HI | GCNGC | 2 cut(s) | 179, 182 |
| Fsp4HI | GCNGC | 2 cut(s) | 179, 182 |
| FspBI | CTAG | 2 cut(s) | 309, 332 |
| GluI | GCNGC | 2 cut(s) | 179, 182 |
| GsuI | CTGGAG | 1 cut(s) | 36 |
| HaeIII | GGCC | 2 cut(s) | 5, 129 |
| HgaI | GACGC | 2 cut(s) | 98, 284 |
| HincII | GTYRAC | 1 cut(s) | 113 |
| HindII | GTYRAC | 1 cut(s) | 113 |
| HinfI | GANTC | 1 cut(s) | 413 |
| Hpy166II | GTNNAC | 2 cut(s) | 113, 356 |
| Hpy188I | TCNGA | 2 cut(s) | 87, 342 |
| Hpy188III | TCNNGA | 3 cut(s) | 15, 265, 332 |
| Hpy8I | GTNNAC | 2 cut(s) | 113, 356 |
| HpyAV | CCTTC | 1 cut(s) | 142 |
| HpyCH4III | ACNGT | 1 cut(s) | 117 |
| HpyCH4V | TGCA | 3 cut(s) | 178, 184, 274 |
| HpyF3I | CTNAG | 2 cut(s) | 38, 155 |
| Kzo9I | GATC | 1 cut(s) | 97 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 1 cut(s) | 86 |
| Lsp1109I | GCAGC | 2 cut(s) | 168, 190 |
| LweI | GCATC | 1 cut(s) | 283 |
| MaeI | CTAG | 2 cut(s) | 309, 332 |
| MaeIII | GTNAC | 1 cut(s) | 159 |
| MalI | GATC | 1 cut(s) | 99 |
| MboI | GATC | 1 cut(s) | 97 |
| MboII | GAAGA | 6 cut(s) | 74, 107, 253, 257, 272, 401 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 3 cut(s) | 56, 173, 321 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 422 |
| MmeI | TCCRAC | 1 cut(s) | 408 |
| MnlI | CCTC | 6 cut(s) | 150, 228, 361, 372, 375, 424 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 4 cut(s) | 59, 144, 165, 320 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 181 |
| NdeII | GATC | 1 cut(s) | 97 |
| NmuCI | GTSAC | 1 cut(s) | 159 |
| NspV | TTCGAA | 1 cut(s) | 93 |
| PkrI | GCNGC | 2 cut(s) | 180, 183 |
| PleI | GAGTC | 1 cut(s) | 421 |
| PpsI | GAGTC | 1 cut(s) | 421 |
| PspPI | GGNCC | 1 cut(s) | 128 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 327, 359 |
| PvuII | CAGCTG | 1 cut(s) | 181 |
| SaqAI | TTAA | 4 cut(s) | 59, 144, 165, 320 |
| SatI | GCNGC | 2 cut(s) | 179, 182 |
| Sau3AI | GATC | 1 cut(s) | 97 |
| Sau96I | GGNCC | 1 cut(s) | 128 |
| SchI | GAGTC | 1 cut(s) | 422 |
| SetI | ASST | 6 cut(s) | 44, 92, 161, 183, 310, 364 |
| SfaNI | GCATC | 1 cut(s) | 283 |
| SfuI | TTCGAA | 1 cut(s) | 93 |
| SmlI | CTYRAG | 1 cut(s) | 407 |
| SmoI | CTYRAG | 1 cut(s) | 407 |
| Sse9I | AATT | 3 cut(s) | 56, 173, 321 |
| SspMI | CTAG | 2 cut(s) | 309, 332 |
| TaaI | ACNGT | 1 cut(s) | 117 |
| TaqI | TCGA | 1 cut(s) | 93 |
| TasI | AATT | 3 cut(s) | 56, 173, 321 |
| Tru1I | TTAA | 4 cut(s) | 59, 144, 165, 320 |
| Tru9I | TTAA | 4 cut(s) | 59, 144, 165, 320 |
| TseFI | GTSAC | 1 cut(s) | 159 |
| TseI | GCWGC | 2 cut(s) | 178, 181 |
| Tsp45I | GTSAC | 1 cut(s) | 159 |
| XbaI | TCTAGA | 1 cut(s) | 331 |
| XspI | CTAG | 2 cut(s) | 309, 332 |