Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G03220 AT5G03500 AT5G03500 AT5G03500 AT5G03500 AT5G03500 AT5G03500 AT5G03500 |
| fragaria_vesca | FvH4_6g21430 |
| malus_domestica | MD12G1050700.v1.1 MD14G1049500.v1.1 |
| prunus_persica | Prupe.1G035300_v2.0.a1 Prupe.1G181600_v2.0.a1 Prupe.1G181600_v2.0.a1 Prupe.1G300700_v2.0.a1 Prupe.1G547000_v2.0.a1 Prupe.2G085900_v2.0.a1 Prupe.2G085900_v2.0.a1 Prupe.3G021700_v2.0.a1 Prupe.6G266300_v2.0.a1 Prupe.7G024200_v2.0.a1 Prupe.7G086000_v2.0.a1 Prupe.8G249100_v2.0.a1 |
| pyrus_communis | pycom14g04050 |
| rosa_chinensis | RchiOBHm_Chr3g0478001 RchiOBHm_Chr4g0406251 |
| rosa_laevigata | RLG00000008785 |
| rosa_multiflora | Rmu_sc0008653.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00350990 Rroxscaffold_6G00403530 |
| rosa_rugosa | Rorug04G0067200 Rorug04G0067200 |
| rosa_samantha | Rh3BG249000 Rh3CG244400 Rh4AG136700 Rh4BG134200 Rh4CG144900 Rh4DG131400 |
| rosa_wichuraiana | Rw3G019660 Rw4G011080 Rw4G011220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 2 cut(s) | 251, 359 |
| AcuI | CTGAAG | 1 cut(s) | 257 |
| AgsI | TTSAA | 1 cut(s) | 199 |
| AluBI | AGCT | 3 cut(s) | 24, 130, 242 |
| AluI | AGCT | 3 cut(s) | 24, 130, 242 |
| Alw26I | GTCTC | 2 cut(s) | 145, 328 |
| AoxI | GGCC | 1 cut(s) | 61 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 365 |
| AspS9I | GGNCC | 1 cut(s) | 62 |
| BccI | CCATC | 2 cut(s) | 163, 243 |
| BciVI | GTATCC | 1 cut(s) | 63 |
| BcoDI | GTCTC | 2 cut(s) | 145, 328 |
| BfaI | CTAG | 2 cut(s) | 243, 266 |
| BfuI | GTATCC | 1 cut(s) | 63 |
| BmgT120I | GGNCC | 1 cut(s) | 62 |
| BmsI | GCATC | 3 cut(s) | 52, 217, 386 |
| BpuEI | CTTGAG | 1 cut(s) | 326 |
| BsaI | GGTCTC | 1 cut(s) | 145 |
| Bse3DI | GCAATG | 1 cut(s) | 224 |
| BseMI | GCAATG | 1 cut(s) | 224 |
| BseMII | CTCAG | 1 cut(s) | 80 |
| BseRI | GAGGAG | 3 cut(s) | 184, 328, 331 |
| BsgI | GTGCAG | 1 cut(s) | 101 |
| BshFI | GGCC | 1 cut(s) | 63 |
| BslFI | GGGAC | 1 cut(s) | 216 |
| BsmAI | GTCTC | 2 cut(s) | 145, 328 |
| BsmFI | GGGAC | 1 cut(s) | 216 |
| BsnI | GGCC | 1 cut(s) | 63 |
| Bso31I | GGTCTC | 1 cut(s) | 145 |
| Bsp143I | GATC | 1 cut(s) | 31 |
| BspANI | GGCC | 1 cut(s) | 63 |
| BspCNI | CTCAG | 1 cut(s) | 81 |
| BspTNI | GGTCTC | 1 cut(s) | 145 |
| BsrDI | GCAATG | 1 cut(s) | 224 |
| BssMI | GATC | 1 cut(s) | 31 |
| Bst4CI | ACNGT | 2 cut(s) | 51, 162 |
| BstC8I | GCNNGC | 1 cut(s) | 132 |
| BstDEI | CTNAG | 1 cut(s) | 89 |
| BstKTI | GATC | 1 cut(s) | 34 |
| BstMAI | GTCTC | 2 cut(s) | 145, 328 |
| BstMBI | GATC | 1 cut(s) | 31 |
| BsuI | GTATCC | 1 cut(s) | 63 |
| BsuRI | GGCC | 1 cut(s) | 63 |
| Cac8I | GCNNGC | 1 cut(s) | 132 |
| Cfr13I | GGNCC | 1 cut(s) | 62 |
| CseI | GACGC | 2 cut(s) | 218, 383 |
| CviJI | RGCY | 5 cut(s) | 24, 63, 130, 134, 242 |
| CviKI_1 | RGCY | 5 cut(s) | 24, 63, 130, 134, 242 |
| DdeI | CTNAG | 1 cut(s) | 89 |
| DpnI | GATC | 1 cut(s) | 33 |
| DpnII | GATC | 1 cut(s) | 31 |
| Eco31I | GGTCTC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 1 cut(s) | 257 |
| FaiI | YATR | 3 cut(s) | 165, 185, 308 |
| FaqI | GGGAC | 1 cut(s) | 216 |
| FspBI | CTAG | 2 cut(s) | 243, 266 |
| HaeIII | GGCC | 1 cut(s) | 63 |
| HgaI | GACGC | 2 cut(s) | 218, 383 |
| HinfI | GANTC | 1 cut(s) | 347 |
| Hpy166II | GTNNAC | 1 cut(s) | 290 |
| Hpy188I | TCNGA | 2 cut(s) | 21, 276 |
| Hpy188III | TCNNGA | 2 cut(s) | 199, 266 |
| Hpy8I | GTNNAC | 1 cut(s) | 290 |
| Hpy99I | CGWCG | 2 cut(s) | 288, 377 |
| HpyAV | CCTTC | 1 cut(s) | 76 |
| HpyCH4III | ACNGT | 2 cut(s) | 51, 162 |
| HpyCH4IV | ACGT | 3 cut(s) | 251, 283, 359 |
| HpyCH4V | TGCA | 4 cut(s) | 43, 112, 118, 208 |
| HpyF3I | CTNAG | 1 cut(s) | 89 |
| HpySE526I | ACGT | 3 cut(s) | 251, 283, 359 |
| Kzo9I | GATC | 1 cut(s) | 31 |
| LmnI | GCTCC | 1 cut(s) | 127 |
| LpnPI | CCDG | 2 cut(s) | 20, 116 |
| LweI | GCATC | 3 cut(s) | 52, 217, 386 |
| MaeI | CTAG | 2 cut(s) | 243, 266 |
| MaeII | ACGT | 3 cut(s) | 251, 283, 359 |
| MaeIII | GTNAC | 1 cut(s) | 93 |
| MalI | GATC | 1 cut(s) | 33 |
| MboI | GATC | 1 cut(s) | 31 |
| MboII | GAAGA | 5 cut(s) | 8, 41, 187, 191, 335 |
| MluCI | AATT | 2 cut(s) | 107, 255 |
| MlyI | GAGTC | 1 cut(s) | 356 |
| MmeI | TCCRAC | 1 cut(s) | 342 |
| MnlI | CCTC | 6 cut(s) | 84, 162, 295, 306, 309, 358 |
| MseI | TTAA | 3 cut(s) | 78, 99, 254 |
| NdeII | GATC | 1 cut(s) | 31 |
| NmuCI | GTSAC | 1 cut(s) | 93 |
| PleI | GAGTC | 1 cut(s) | 355 |
| PpsI | GAGTC | 1 cut(s) | 355 |
| Psp1406I | AACGTT | 2 cut(s) | 251, 359 |
| PspPI | GGNCC | 1 cut(s) | 62 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 261, 293 |
| SaqAI | TTAA | 3 cut(s) | 78, 99, 254 |
| Sau3AI | GATC | 1 cut(s) | 31 |
| Sau96I | GGNCC | 1 cut(s) | 62 |
| SchI | GAGTC | 1 cut(s) | 356 |
| SetI | ASST | 7 cut(s) | 26, 95, 132, 244, 254, 286, 362 |
| SfaNI | GCATC | 3 cut(s) | 52, 217, 386 |
| SmlI | CTYRAG | 1 cut(s) | 341 |
| SmoI | CTYRAG | 1 cut(s) | 341 |
| Sse9I | AATT | 2 cut(s) | 107, 255 |
| SspMI | CTAG | 2 cut(s) | 243, 266 |
| TaaI | ACNGT | 2 cut(s) | 51, 162 |
| TaiI | ACGT | 3 cut(s) | 254, 286, 362 |
| TasI | AATT | 2 cut(s) | 107, 255 |
| Tru1I | TTAA | 3 cut(s) | 78, 99, 254 |
| Tru9I | TTAA | 3 cut(s) | 78, 99, 254 |
| TseFI | GTSAC | 1 cut(s) | 93 |
| Tsp45I | GTSAC | 1 cut(s) | 93 |
| TspGWI | ACGGA | 1 cut(s) | 346 |
| XbaI | TCTAGA | 1 cut(s) | 265 |
| XspI | CTAG | 2 cut(s) | 243, 266 |