Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001017

Physical Location & Seq

Genomic Coordinates Reverse (-)

13624273 .. 13634912

Gene Structure 10640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G167500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGAACCCAGTTTCCATAGTTTCAGTTTCTGCTTCTGATTGGGTCAATCAAATGGCCACCACCATTTTCTTAACGCCCAACTCCATTCTGAGAAACTCTTTTGATTGTGGGCATGCCCTCCAATTCCTCTGTTCTAACCATAAATTCAGAAGCAGACAAATCTTTCTTAGAAAATGCTATGGAAGCCGAGGGGGGTTTTCTCTCAATCGTGGATTTCGTCTGTTTTGCCAATCAAAGACAGAGGAAATGCAGATACGAAGGTATTCCCCATTTCTAGAAAGTGTGTTACTAGATGCTAATGATGCTTCGGTATCTAATGAGTGGAGAGCAGTTCCTGACATTTGGAGATCTTCAGCTGAGAAATATGGTGACCGTGTCGCATTGGTGGATCCATACCATGACCCACCTTCAAATTTAACTTATAAACAGCTTGAGCAGGAAATTTTGGATTTTTCTGAAGGGCTGAGAGTTGTTGGAGTAAAGCCAGAAGAAAAAATTGCACTTTTTGCTGATAATTCATGCCGTTGGCTTGTTGCGGATCAGGGTATAATGGCAACTGGAGCAATCAATGTAGCAAGAGGTTCGAGATCATCCGTTGAAGAGTTATCACAAATATACAATCATTCTGATAGTGTTGCACTTGCTGTGGACAGTCCTGAATTGTTAAATCGATTTTCAGAAGAATTCTATTCCAAGCCTATTAAATTTATTGTTCTGTTATGGGGGGAGAAGTCAAGCCTGGTCAGTGAAGGAAAGGTTCCTATTTTTAACTACAAGGAGATTCTAGATTTGGGACGAGATAGTCGTAAGATTATGCTTGATTCTGATGATAAACAGCAGTACTGTCTGCATAAACCTATCAAACCAGATGATGTTGCTGCATTAGTATATACAAGTGGAACAAGTGGCAACCCAAAAGGGGTCATCCTCACCCATCGAAATCTGATGCATCAGATAAAGAACCTCTCAGACATTGTACCTGCTGTAGGTGGGGACAAATTTCTTAGCATGCTCCCACCTTGGCATTGCTATGAACGAGCTTGTGAGTACTTTGCTTTTACGTGTGGCATTGAGCAGTTTTACACAAATGTGAGGAAATTGAAGGATGATTTGCGGCAATATCAACCAAACTATGTAATTTCAGTTCCTTTAGTGTATGAGACACTTTACAGCGGGATTCAGAAACAAATTTCTTCTAGCTCTACAGTTCTTAAGTTTGTTGCACTTACATTCATAAGGATCAGTTTGGCATACATGGAGTTTAAGAGGATCTATGAGGGGACATATTTGACGAGGAACCAGAAGCAACCGCCATATCTTGTTTCAATATCAGATTGGTTATGGGCAAGAGTTATTGCTGCATTACTATGGCCTTTGCATGTGTTGGGAAAGAAACTAGTTTATAGAAATATTCACTCTGCTCTTGGAATATCAAAGGCTGGCATCAGTGGAGGAGGTTTTCTGCCTTCACATGTTGATAAATTTTTTGAGGCAATTGACGTGAAACTGCTGAATGGATATGGCTTAACAGAGACTTCTCCTGTTGTTGCTGCTCGACGACCAAACTGTAATGTTGTTGGTTCAGTTGGGCATCCAATTCGACATATAGAGTTCAAAGTTGTAGATTCTGAAACTAGTGAAGTTCTCCCCCCTGGTTTAAGTGGCATTTTAAAAGTTAGGGGGCCACCAGTGATGAAAGGATACTACAAGAATCCAGGAGCTACAAAGCACGTTCTGGATGATGATGGTTGGCTAAACACTGGAGACATAGGCTGGATTGCTCCTCACCATTCAACAGGGCGAAGTCGTCATTGTGGAGGTGTGGTTGTCCTTGAAGGACGTGCCAAGGACACTATAGTTCTTTCTACAGGGGAAAATATTGAACCAGCAGAGCTTGAGGAAGCTGCCTTGAGAAGTAGTTTAATTCAACAAATTGTTGTCATTGGCCAGGATCAACGACGCCTTGGGGCAATAATTGTTCCAAACAAAGAAGAGGCTTTACTTGCAGCAAAAAAGTTGTCTCTTGTAGATATTGATGCCTCTGACCTAAGTAACGACAGAATGACAAACTTGTTATACGAAGAATTGAGAAAATGGACTTCAGGGCGTTCATTTCAAATTGGACCAATCTTAATTGCGGATGAACCCTTTACGATTGACAGTGGCTTAATGACTCCAACCATGAAAATTCGAAGGGATAGAATCGTGGCTCAATACAAGGACCAAATAGACAATCTGTTCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0008922 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016053 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0030497 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

749

Amino Acids

83.92

Weight (kDa)

8.29

Isoelectric Point (pI)

44.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23790 AT4G14070
fragaria_vesca	FvH4_4g13140 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151
malus_domestica	MD04G1018700.v1.1 MD04G1018900.v1.1
prunus_persica	Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G187500_v2.0.a1
pyrus_communis	pycom04g01500 pycom04g01510
rosa_chinensis	RchiOBHm_Chr4g0412911 RchiOBHm_Chr4g0413021 RchiOBHm_Chr4g0413231
rosa_laevigata	RLG00000008230 RLG00000008244 RLG00000008246
rosa_multiflora	Rmu_sc0000717.1_g000026 Rmu_sc0005849.1_g000011 Rmu_sc0021560.1_g000001
rosa_roxburghii	Rroxscaffold_5G00357150 Rroxscaffold_5G00357210
rosa_rugosa	Rorug04G0117500 Rorug04G0117600 Rorug04G0117700 Rorug04G0117800 Rorug04G0117900 Rorug04G0118000 Rorug04G0118000 Rorug04G0118100 Rorug04G0118100 Rorug04G0118600
rosa_samantha	Rh4AG176400 Rh4AG177100 Rh4AG178600 Rh4BG177000 Rh4BG177900 Rh4CG187400 Rh4CG188100 Rh4CG189200 Rh4DG173700 Rh4DG173900
rosa_wichuraiana	Rw4G014810 Rw4G014820 Rw4G014850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	423
AasI	GACNNNNNNGTC	1 cut(s)	801
Acc36I	ACCTGC	1 cut(s)	988
AciI	CCGC	5 cut(s)	536, 1114, 1173, 1310, 2138
AclWI	GGATC	6 cut(s)	383, 396, 546, 1247, 1277, 1959
AcoI	YGGCCR	2 cut(s)	54, 1945
AcsI	RAATTY	9 cut(s)	143, 412, 441, 683, 704, 998, 1188, 1481, 2187
AcuI	CTGAAG	3 cut(s)	336, 477, 2085
AcyI	GRCGYC	1 cut(s)	1960
AfaI	GTAC	3 cut(s)	842, 978, 1049
AfiI	CCNNNNNNNGG	2 cut(s)	919, 986
AflII	CTTAAG	1 cut(s)	1211
AflIII	ACRYGT	2 cut(s)	1061, 1471
AhlI	ACTAGT	2 cut(s)	1396, 1634
AjiI	CACGTC	2 cut(s)	1501, 1841
AjnI	CCWGG	4 cut(s)	738, 1651, 1714, 1947
AleI	CACNNNNGTG	1 cut(s)	1088
AloI	GAACNNNNNNTCC	1 cut(s)	28
AluBI	AGCT	7 cut(s)	356, 430, 1040, 1200, 1721, 1894, 1904
AluI	AGCT	7 cut(s)	356, 430, 1040, 1200, 1721, 1894, 1904
Alw26I	GTCTC	4 cut(s)	1154, 1526, 1758, 2025
AlwI	GGATC	6 cut(s)	383, 396, 546, 1247, 1277, 1959
AlwNI	CAGNNNCTG	2 cut(s)	29, 335
AoxI	GGCC	4 cut(s)	54, 1370, 1682, 1945
ApeKI	GCWGC	5 cut(s)	878, 1358, 1550, 1904, 2006
ApoI	RAATTY	9 cut(s)	143, 412, 441, 683, 704, 998, 1188, 1481, 2187
ArsI	GACNNNNNNTTYG	2 cut(s)	2003, 2035
Asp700I	GAANNNNTTC	1 cut(s)	262
AspS9I	GGNCC	3 cut(s)	1682, 2123, 2221
AsuHPI	GGTGA	3 cut(s)	380, 922, 1778
AsuII	TTCGAA	1 cut(s)	2191
AvaII	GGWCC	2 cut(s)	2123, 2221
BaeI	ACNNNNGTAYC	2 cut(s)	245, 278
BalI	TGGCCA	2 cut(s)	56, 1947
BamHI	GGATCC	1 cut(s)	388
BarI	GAAGNNNNNNTAC	2 cut(s)	1983, 2015
BbvI	GCAGC	5 cut(s)	865, 1345, 1537, 1891, 2018
BccI	CCATC	2 cut(s)	942, 1739
BceAI	ACGGC	1 cut(s)	507
BcgI	CGANNNNNNTGC	4 cut(s)	564, 598, 1580, 1614
BciT130I	CCWGG	4 cut(s)	740, 1653, 1716, 1949
BciVI	GTATCC	1 cut(s)	1694
BcoDI	GTCTC	4 cut(s)	1154, 1526, 1758, 2025
BcuI	ACTAGT	2 cut(s)	1396, 1634
BfaI	CTAG	6 cut(s)	275, 290, 785, 1197, 1397, 1635
BfmI	CTRYAG	4 cut(s)	984, 1203, 1854, 1866
BfrI	CTTAAG	1 cut(s)	1211
BfuAI	ACCTGC	1 cut(s)	988
BfuI	GTATCC	1 cut(s)	1694
BglII	AGATCT	1 cut(s)	347
BisI	GCNGC	6 cut(s)	879, 1115, 1359, 1551, 1905, 2007
BlsI	GCNGC	6 cut(s)	880, 1116, 1360, 1552, 1906, 2008
BmcAI	AGTACT	2 cut(s)	842, 1049
Bme1390I	CCNGG	4 cut(s)	740, 1653, 1716, 1949
Bme18I	GGWCC	2 cut(s)	2123, 2221
BmgBI	CACGTC	2 cut(s)	1501, 1841
BmgT120I	GGNCC	3 cut(s)	1682, 2123, 2221
BmiI	GGNNCC	4 cut(s)	390, 759, 1298, 1683
BmrFI	CCNGG	4 cut(s)	740, 1653, 1716, 1949
BmsI	GCATC	7 cut(s)	283, 292, 936, 958, 1452, 1600, 2026
BpmI	CTGGAG	2 cut(s)	579, 1782
Bpu14I	TTCGAA	1 cut(s)	2191
BpuEI	CTTGAG	3 cut(s)	452, 1916, 1930
Bsa29I	ATCGAT	1 cut(s)	670
BsaAI	YACGTR	1 cut(s)	1062
BsaHI	GRCGYC	1 cut(s)	1960
BsaJI	CCNNGG	5 cut(s)	187, 1019, 1651, 1845, 1963
BsaXI	ACNNNNNCTCC	2 cut(s)	1809, 1839
Bsc4I	CCNNNNNNNGG	2 cut(s)	919, 986
Bse1I	ACTGG	4 cut(s)	8, 562, 1688, 1765
Bse3DI	GCAATG	1 cut(s)	1024
BseBI	CCWGG	4 cut(s)	740, 1653, 1716, 1949
BseCI	ATCGAT	1 cut(s)	670
BseDI	CCNNGG	5 cut(s)	187, 1019, 1651, 1845, 1963
BseGI	GGATG	6 cut(s)	590, 924, 1111, 1591, 1744, 2146
BseLI	CCNNNNNNNGG	2 cut(s)	919, 986
BseMI	GCAATG	1 cut(s)	1024
BseMII	CTCAG	4 cut(s)	80, 348, 455, 981
BseNI	ACTGG	4 cut(s)	8, 562, 1688, 1765
BseRI	GAGGAG	2 cut(s)	1467, 1773
BseXI	GCAGC	5 cut(s)	865, 1345, 1537, 1891, 2018
BshFI	GGCC	4 cut(s)	56, 1372, 1684, 1947
BshVI	ATCGAT	1 cut(s)	670
BslFI	GGGAC	3 cut(s)	807, 1007, 1294
BslI	CCNNNNNNNGG	2 cut(s)	919, 986
BsmAI	GTCTC	4 cut(s)	1154, 1526, 1758, 2025
BsmFI	GGGAC	3 cut(s)	807, 1007, 1294
BsnI	GGCC	4 cut(s)	56, 1372, 1684, 1947
Bsp119I	TTCGAA	1 cut(s)	2191
Bsp143I	GATC	7 cut(s)	347, 388, 538, 587, 1239, 1269, 1951
BspACI	CCGC	5 cut(s)	536, 1114, 1173, 1310, 2138
BspANI	GGCC	4 cut(s)	56, 1372, 1684, 1947
BspCNI	CTCAG	4 cut(s)	81, 349, 456, 980
BspDI	ATCGAT	1 cut(s)	670
BspLI	GGNNCC	4 cut(s)	390, 759, 1298, 1683
BspMI	ACCTGC	1 cut(s)	988
BspPI	GGATC	6 cut(s)	383, 396, 546, 1247, 1277, 1959
BspT104I	TTCGAA	1 cut(s)	2191
BspTI	CTTAAG	1 cut(s)	1211
BsrDI	GCAATG	1 cut(s)	1024
BsrI	ACTGG	4 cut(s)	8, 562, 1688, 1765
BssECI	CCNNGG	5 cut(s)	187, 1019, 1651, 1845, 1963
BssMI	GATC	7 cut(s)	347, 388, 538, 587, 1239, 1269, 1951
BssNI	GRCGYC	1 cut(s)	1960
BssT1I	CCWWGG	3 cut(s)	1019, 1845, 1963
Bst2UI	CCWGG	4 cut(s)	740, 1653, 1716, 1949
Bst4CI	ACNGT	6 cut(s)	374, 653, 845, 1207, 1568, 2162
Bst6I	CTCTTC	2 cut(s)	594, 1986
BstACI	GRCGYC	1 cut(s)	1960
BstAFI	CTTAAG	1 cut(s)	1211
BstAPI	GCANNNNNTGC	1 cut(s)	506
BstBAI	YACGTR	1 cut(s)	1062
BstBI	TTCGAA	1 cut(s)	2191
BstC8I	GCNNGC	3 cut(s)	114, 1010, 1441
BstDEI	CTNAG	7 cut(s)	89, 167, 357, 464, 967, 1004, 2048
BstEII	GGTNACC	1 cut(s)	368
BstENI	CCTNNNNNAGG	1 cut(s)	984
BstF5I	GGATG	6 cut(s)	590, 924, 1111, 1591, 1744, 2146
BstKTI	GATC	7 cut(s)	350, 391, 541, 590, 1242, 1272, 1954
BstMAI	GTCTC	4 cut(s)	1154, 1526, 1758, 2025
BstMBI	GATC	7 cut(s)	347, 388, 538, 587, 1239, 1269, 1951
BstMWI	GCNNNNNNNGC	5 cut(s)	183, 302, 506, 560, 2003
BstNI	CCWGG	4 cut(s)	740, 1653, 1716, 1949
BstNSI	RCATGY	4 cut(s)	116, 1012, 1382, 1475
BstPI	GGTNACC	1 cut(s)	368
BstSCI	CCNGG	4 cut(s)	738, 1651, 1714, 1947
BstSFI	CTRYAG	4 cut(s)	984, 1203, 1854, 1866
BstV1I	GCAGC	5 cut(s)	865, 1345, 1537, 1891, 2018
BstX2I	RGATCY	3 cut(s)	347, 388, 1269
BstYI	RGATCY	3 cut(s)	347, 388, 1269
Bsu15I	ATCGAT	1 cut(s)	670
BsuI	GTATCC	1 cut(s)	1694
BsuRI	GGCC	4 cut(s)	56, 1372, 1684, 1947
BsuTUI	ATCGAT	1 cut(s)	670
BtrI	CACGTC	2 cut(s)	1501, 1841
BtsCI	GGATG	6 cut(s)	590, 924, 1111, 1591, 1744, 2146
BtsIMutI	CAGTG	5 cut(s)	751, 1453, 1695, 1758, 2167
BveI	ACCTGC	1 cut(s)	988
Cac8I	GCNNGC	3 cut(s)	114, 1010, 1441
CaiI	CAGNNNCTG	2 cut(s)	29, 335
Cfr13I	GGNCC	3 cut(s)	1682, 2123, 2221
ClaI	ATCGAT	1 cut(s)	670
CseI	GACGC	1 cut(s)	1968
Csp6I	GTAC	3 cut(s)	841, 977, 1048
CviAII	CATG	8 cut(s)	113, 398, 519, 1009, 1255, 1379, 1472, 2182
CviQI	GTAC	3 cut(s)	841, 977, 1048
DdeI	CTNAG	7 cut(s)	89, 167, 357, 464, 967, 1004, 2048
DpnI	GATC	7 cut(s)	349, 390, 540, 589, 1241, 1271, 1953
DpnII	GATC	7 cut(s)	347, 388, 538, 587, 1239, 1269, 1951
DraI	TTTAAA	1 cut(s)	1671
DrdI	GACNNNNNNGTC	1 cut(s)	801
DseDI	GACNNNNNNGTC	1 cut(s)	801
EaeI	YGGCCR	2 cut(s)	54, 1945
Eam1104I	CTCTTC	2 cut(s)	594, 1986
EarI	CTCTTC	2 cut(s)	594, 1986
Eco130I	CCWWGG	3 cut(s)	1019, 1845, 1963
Eco47I	GGWCC	2 cut(s)	2123, 2221
Eco57I	CTGAAG	3 cut(s)	336, 477, 2085
Eco91I	GGTNACC	1 cut(s)	368
EcoNI	CCTNNNNNAGG	1 cut(s)	984
EcoO65I	GGTNACC	1 cut(s)	368
EcoRI	GAATTC	1 cut(s)	683
EcoRII	CCWGG	4 cut(s)	738, 1651, 1714, 1947
EcoT14I	CCWWGG	3 cut(s)	1019, 1845, 1963
EcoT22I	ATGCAT	1 cut(s)	951
ErhI	CCWWGG	3 cut(s)	1019, 1845, 1963
FaeI	CATG	8 cut(s)	116, 401, 522, 1012, 1258, 1382, 1475, 2185
FaqI	GGGAC	3 cut(s)	807, 1007, 1294
FatI	CATG	8 cut(s)	112, 397, 518, 1008, 1254, 1378, 1471, 2181
FauI	CCCGC	1 cut(s)	1166
Fnu4HI	GCNGC	6 cut(s)	879, 1115, 1359, 1551, 1905, 2007
FokI	GGATG	6 cut(s)	577, 911, 1118, 1578, 1751, 2153
Fsp4HI	GCNGC	6 cut(s)	879, 1115, 1359, 1551, 1905, 2007
FspBI	CTAG	6 cut(s)	275, 290, 785, 1197, 1397, 1635
GluI	GCNGC	6 cut(s)	879, 1115, 1359, 1551, 1905, 2007
GsuI	CTGGAG	2 cut(s)	579, 1782
HaeIII	GGCC	4 cut(s)	56, 1372, 1684, 1947
HgaI	GACGC	1 cut(s)	1968
Hin1I	GRCGYC	1 cut(s)	1960
Hin1II	CATG	8 cut(s)	116, 401, 522, 1012, 1258, 1382, 1475, 2185
HinfI	GANTC	7 cut(s)	781, 821, 1177, 1625, 1711, 2173, 2202
HphI	GGTGA	3 cut(s)	380, 922, 1778
Hpy166II	GTNNAC	1 cut(s)	649
Hpy188III	TCNNGA	6 cut(s)	275, 335, 585, 656, 785, 1736
Hpy8I	GTNNAC	1 cut(s)	649
Hpy99I	CGWCG	2 cut(s)	1560, 1962
HpyAV	CCTTC	8 cut(s)	252, 417, 452, 743, 1096, 1476, 1829, 2187
HpyCH4III	ACNGT	6 cut(s)	374, 653, 845, 1207, 1568, 2162
HpyCH4IV	ACGT	4 cut(s)	1061, 1500, 1731, 1840
HpyF10VI	GCNNNNNNNGC	5 cut(s)	183, 302, 506, 560, 2003
HpyF3I	CTNAG	7 cut(s)	89, 167, 357, 464, 967, 1004, 2048
HpySE526I	ACGT	4 cut(s)	1061, 1500, 1731, 1840
Hsp92I	GRCGYC	1 cut(s)	1960
Hsp92II	CATG	8 cut(s)	116, 401, 522, 1012, 1258, 1382, 1475, 2185
Kzo9I	GATC	7 cut(s)	347, 388, 538, 587, 1239, 1269, 1951
LmnI	GCTCC	4 cut(s)	560, 1017, 1718, 1786
Lsp1109I	GCAGC	5 cut(s)	865, 1345, 1537, 1891, 2018
LweI	GCATC	7 cut(s)	283, 292, 936, 958, 1452, 1600, 2026
MaeI	CTAG	6 cut(s)	275, 290, 785, 1197, 1397, 1635
MaeII	ACGT	4 cut(s)	1061, 1500, 1731, 1840
MaeIII	GTNAC	3 cut(s)	285, 368, 2051
MalI	GATC	7 cut(s)	349, 390, 540, 589, 1241, 1271, 1953
MboI	GATC	7 cut(s)	347, 388, 538, 587, 1239, 1269, 1951
MboII	GAAGA	7 cut(s)	342, 500, 611, 692, 1185, 2003, 2093
MfeI	CAATTG	1 cut(s)	1494
MflI	RGATCY	3 cut(s)	347, 388, 1269
MlsI	TGGCCA	2 cut(s)	56, 1947
MluNI	TGGCCA	2 cut(s)	56, 1947
MlyI	GAGTC	1 cut(s)	2167
MmeI	TCCRAC	2 cut(s)	454, 2201
Mox20I	TGGCCA	2 cut(s)	56, 1947
Mph1103I	ATGCAT	1 cut(s)	951
MroXI	GAANNNNTTC	1 cut(s)	262
MscI	TGGCCA	2 cut(s)	56, 1947
MslI	CAYNNNNRTG	3 cut(s)	1029, 1088, 1366
Msp20I	TGGCCA	2 cut(s)	56, 1947
MspA1I	CMGCKG	2 cut(s)	356, 1173
MspCI	CTTAAG	1 cut(s)	1211
MspR9I	CCNGG	4 cut(s)	740, 1653, 1716, 1949
MunI	CAATTG	1 cut(s)	1494
MvaI	CCWGG	4 cut(s)	740, 1653, 1716, 1949
MwoI	GCNNNNNNNGC	5 cut(s)	183, 302, 506, 560, 2003
NdeII	GATC	7 cut(s)	347, 388, 538, 587, 1239, 1269, 1951
NlaIII	CATG	8 cut(s)	116, 401, 522, 1012, 1258, 1382, 1475, 2185
NlaIV	GGNNCC	4 cut(s)	390, 759, 1298, 1683
NmeAIII	GCCGAG	1 cut(s)	212
NmuCI	GTSAC	1 cut(s)	368
NsiI	ATGCAT	1 cut(s)	951
NspI	RCATGY	4 cut(s)	116, 1012, 1382, 1475
NspV	TTCGAA	1 cut(s)	2191
OliI	CACNNNNGTG	1 cut(s)	1088
PaeI	GCATGC	2 cut(s)	116, 1012
PciI	ACATGT	1 cut(s)	1471
PcsI	WCGNNNNNNNCGW	2 cut(s)	214, 802
PdmI	GAANNNNTTC	1 cut(s)	262
PfeI	GAWTC	6 cut(s)	781, 821, 1177, 1625, 1711, 2202
PflFI	GACNNNGTC	1 cut(s)	374
PfoI	TCCNGGA	1 cut(s)	1714
PkrI	GCNGC	6 cut(s)	880, 1116, 1360, 1552, 1906, 2008
PleI	GAGTC	1 cut(s)	2167
PpsI	GAGTC	1 cut(s)	2167
Ppu21I	YACGTR	1 cut(s)	1062
PscI	ACATGT	1 cut(s)	1471
PsiI	TTATAA	1 cut(s)	423
Psp6I	CCWGG	4 cut(s)	738, 1651, 1714, 1947
PspEI	GGTNACC	1 cut(s)	368
PspGI	CCWGG	4 cut(s)	738, 1651, 1714, 1947
PspN4I	GGNNCC	4 cut(s)	390, 759, 1298, 1683
PspPI	GGNCC	3 cut(s)	1682, 2123, 2221
PsrI	GAACNNNNNNTAC	2 cut(s)	1128, 1160
PstNI	CAGNNNCTG	2 cut(s)	29, 335
PsuI	RGATCY	3 cut(s)	347, 388, 1269
PsyI	GACNNNGTC	1 cut(s)	374
PvuII	CAGCTG	1 cut(s)	356
RsaI	GTAC	3 cut(s)	842, 978, 1049
RsaNI	GTAC	3 cut(s)	841, 977, 1048
RseI	CAYNNNNRTG	3 cut(s)	1029, 1088, 1366
SatI	GCNGC	6 cut(s)	879, 1115, 1359, 1551, 1905, 2007
Sau3AI	GATC	7 cut(s)	347, 388, 538, 587, 1239, 1269, 1951
Sau96I	GGNCC	3 cut(s)	1682, 2123, 2221
ScaI	AGTACT	2 cut(s)	842, 1049
SchI	GAGTC	1 cut(s)	2167
ScrFI	CCNGG	4 cut(s)	740, 1653, 1716, 1949
SfaNI	GCATC	7 cut(s)	283, 292, 936, 958, 1452, 1600, 2026
SfcI	CTRYAG	4 cut(s)	984, 1203, 1854, 1866
SfuI	TTCGAA	1 cut(s)	2191
SinI	GGWCC	2 cut(s)	2123, 2221
SmiMI	CAYNNNNRTG	3 cut(s)	1029, 1088, 1366
SmlI	CTYRAG	4 cut(s)	431, 1211, 1895, 1909
SmoI	CTYRAG	4 cut(s)	431, 1211, 1895, 1909
SpeI	ACTAGT	2 cut(s)	1396, 1634
SphI	GCATGC	2 cut(s)	116, 1012
SsiI	CCGC	5 cut(s)	536, 1114, 1173, 1310, 2138
SspI	AATATT	2 cut(s)	1411, 1879
SspMI	CTAG	6 cut(s)	275, 290, 785, 1197, 1397, 1635
StyD4I	CCNGG	4 cut(s)	738, 1651, 1714, 1947
StyI	CCWWGG	3 cut(s)	1019, 1845, 1963
TaaI	ACNGT	6 cut(s)	374, 653, 845, 1207, 1568, 2162
TaiI	ACGT	4 cut(s)	1064, 1503, 1734, 1843
TaqI	TCGA	6 cut(s)	584, 670, 937, 1555, 1600, 2191
TatI	WGTACW	2 cut(s)	840, 1047
TauI	GCSGC	1 cut(s)	1117
TfiI	GAWTC	6 cut(s)	781, 821, 1177, 1625, 1711, 2202
TscAI	CASTG	5 cut(s)	751, 1453, 1695, 1765, 2167
TseFI	GTSAC	1 cut(s)	368
TseI	GCWGC	5 cut(s)	878, 1358, 1550, 1904, 2006
Tsp45I	GTSAC	1 cut(s)	368
TspDTI	ATGAA	8 cut(s)	17, 507, 1047, 1222, 1709, 2100, 2157, 2198
TspGWI	ACGGA	1 cut(s)	583
TspRI	CASTG	5 cut(s)	751, 1453, 1695, 1765, 2167
Tth111I	GACNNNGTC	1 cut(s)	374
Vha464I	CTTAAG	1 cut(s)	1211
VpaK11BI	GGWCC	2 cut(s)	2123, 2221
XagI	CCTNNNNNAGG	1 cut(s)	984
XapI	RAATTY	9 cut(s)	143, 412, 441, 683, 704, 998, 1188, 1481, 2187
XbaI	TCTAGA	2 cut(s)	274, 784
XceI	RCATGY	4 cut(s)	116, 1012, 1382, 1475
XmnI	GAANNNNTTC	1 cut(s)	262
XspI	CTAG	6 cut(s)	275, 290, 785, 1197, 1397, 1635
ZrmI	AGTACT	2 cut(s)	842, 1049
Zsp2I	ATGCAT	1 cut(s)	951

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.