Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0001017

Physical Location & Seq

Genomic Coordinates Reverse (-)

1384689 .. 1391951

Gene Structure 7263 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g01500.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGAACCCAATTTCCACAGTTTCTGCTTCTGCTTCTGTCAACCAAATGGCCACCTTTTTCTTAGCGCCAAACTACGTCCTGGGCAGCTCTTCTGATTGCGGGCACACCCTTCAGTTCCGTTCCAACAATAATTCCAGAAGCGGACAACTTTTTCATAGAAAATGGCACGGAAGCCGAGGTGGGATTTCTGTCAGTCGTGGATTTAGAGTGTTATGCCAGTCCAAGACAGAAGAAAAGCAGATACGAAGGCATTCACCTTTCCTGGAACGTGTGTTACTAGATGATAATGATGCTTCAGAATCTGATAAGTGGAAAGCAGTTCCTGATATTTGGAGATCTTCAGCTGCTAAATATGGTGACCTAGTAGCATTGGTGGATCCCTATCATGACCCACCTTCGAGTATAACTTATAAACAGCTTGAGCAGGAAATTTTGGACTTTGCTGAAGGGATGAGAGTTGTTGGAGTAAAGCCAGACGAAAAAATTGCACTGTTTGCTGATAATTCATGCCGTTGGCTTGTTGCTGATCAAGGTATAATGGCCACTGGAGCAATCAACGTGGTAAGAGGTTCGAGGTCATCAGTCGAAGAGTTATTGCAAATATACAATCATTCTGATAGTGTTGCGCTTGCTGTGGACAGTCCTGAGTTGTTCAATCGGATATCAGAAGAATTTAGTTCCAAGGCGATGAAATTTATTGTTCTGCTATGGGGGGAGAAGTCAAGCCTGAAAAATGAAGGAAATGTTCCTATTTTCGACTACAAGGAGATACTAGATTTGGGACGAGAGAGTCGCAAGAGTTTGCTTGATTCTGATGATAAACAACAGTCTGATACGTATGAAGTTATCAAATCGGATGATGTAGCTACATTAGTATATACGAGTGGAACAAGTGGCAACCCAAAAGGTGTCATGCTCACACATCGGAATTTGTTGCATCAGATAAAGAACCTATGGGACGCTGTACCTTGTGTAGGTGGCGACAAATTTCTTAGCATGCTTCCACCATGGCATTGCTATGAACGAGCTTGTGAGTATTTCGCTTTTACCTGCGGAGTTGAGCAATTTTACACCAGTGTGCGGAAAGTGAAGGATGATTTGCGAAAATATCAGCCAACCTATATAATTTCAGTTCCTTTAGTGTATGAGTCACTTTACAGCGGTATTCAGAAACAAATTTCATCCGCCTCTACTGTTCGTAAGCTTATTGCGCTTACATTCATAAGGATCAGTATGGCGTACATGGAGTTTAAGAGAATCTATGAGGGAAAATATCTGACGAGGAACCCGAAGCAAAGTTCATATCTTGTTTCAGTAGCAGATTGGTTATGGGCGAGAATAATTGCTGCGTTTTTATGGCCTTTGCACTTGCTGGGAAAGAAACTAGTCTACAGTAAAATTCAATCCGCTATTGGAATATCAAAGGCCGGCATCAGTGGAGGAGGTTGTCTGCCTTCACATGTTGATAAATTTTTTGAGGCAATTGACATGAAACTGCTGAATGGATATGGTTTAACGGAGACTTCTCCTGTTGTTGCTTCTCGACGACTAAATTTTAATGTTATTGGTTCTGTTGGGCTACCAATTCGACATACTGAGTTCAAAGTCGTAGATTCTGAAACCGGTGAAGTTCTTTCTCCTGGTTTGAGCGGAATTTTGAAAGTTAGGGGACCTCAAGTGATGAAAGGATACTACAAGAATCCAGGCACTACAAAGAAAGCATTGGATGACGATGGGTGGCTAGACACTGGAGACATTGGTTGGATTGCTCCTCACCATTCAATAGGGCGAAGTCGTTGTTGTGGAGGGGTGGTTGTTCTTGAAGGACGTGCCAAGGACACTATCGTTCTTTTAACAGGGGAAAACGTTGAACCAGTAGAGATTGAGGAAGCTGCCTTGAGAAGTAGTCTAATTCAACAAATTGTTGTCATCGGCCAGGATCAGCGACGCCTTGGGGCAATTGTTGTTCCAAACAAAGAAGAGGCTTTACTCGCAGCCAAAAAGTTGGCTGCTGTAGATGCTGCTGATGCCTCCAGCCTAAGCAACGACAGATTGACAAGCTTGGTTTATGAAGAATTGAGAAAATGGACTTCAGGGTGTTCATTTCAAATCGGACCAATCATAATCGCGGACGAACCCTTTACGATTGATAGTGGCCTAATGACTCCAACCATGAAAATTCGACGGGACCGAGTCGTGGCTCAATACAAAGAACAAATAGACAACCTTTTCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0008922 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016053 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0030497 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

746

Amino Acids

82.86

Weight (kDa)

8.11

Isoelectric Point (pI)

41.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23790 AT4G14070
fragaria_vesca	FvH4_4g13140 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151
malus_domestica	MD04G1018700.v1.1 MD04G1018900.v1.1
prunus_persica	Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G187500_v2.0.a1
pyrus_communis	pycom04g01500 pycom04g01510
rosa_chinensis	RchiOBHm_Chr4g0412911 RchiOBHm_Chr4g0413021 RchiOBHm_Chr4g0413231
rosa_laevigata	RLG00000008230 RLG00000008244 RLG00000008246
rosa_multiflora	Rmu_sc0000717.1_g000026 Rmu_sc0005849.1_g000011 Rmu_sc0021560.1_g000001
rosa_roxburghii	Rroxscaffold_5G00357150 Rroxscaffold_5G00357210
rosa_rugosa	Rorug04G0117500 Rorug04G0117600 Rorug04G0117700 Rorug04G0117800 Rorug04G0117900 Rorug04G0118000 Rorug04G0118000 Rorug04G0118100 Rorug04G0118100 Rorug04G0118600
rosa_samantha	Rh4AG176400 Rh4AG177100 Rh4AG178600 Rh4BG177000 Rh4BG177900 Rh4CG187400 Rh4CG188100 Rh4CG189200 Rh4DG173700 Rh4DG173900
rosa_wichuraiana	Rw4G014810 Rw4G014820 Rw4G014850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	411
AasI	GACNNNNNNGTC	1 cut(s)	789
Acc36I	ACCTGC	1 cut(s)	1058
AccBSI	CCGCTC	1 cut(s)	1650
AccI	GTMKAC	1 cut(s)	1389
AccII	CGCG	1 cut(s)	2129
AciI	CCGC	9 cut(s)	99, 141, 1053, 1081, 1161, 1185, 1407, 1650, 2129
AclI	AACGTT	1 cut(s)	1866
AclWI	GGATC	4 cut(s)	371, 384, 1235, 1947
AcoI	YGGCCR	3 cut(s)	48, 540, 1933
AcuI	CTGAAG	5 cut(s)	95, 279, 324, 465, 2076
AcyI	GRCGYC	1 cut(s)	1948
AfaI	GTAC	2 cut(s)	966, 1241
AfiI	CCNNNNNNNGG	3 cut(s)	974, 1080, 2197
AflIII	ACRYGT	2 cut(s)	268, 1459
AgeI	ACCGGT	1 cut(s)	1622
AhlI	ACTAGT	1 cut(s)	1384
AjiI	CACGTC	1 cut(s)	1829
AjnI	CCWGG	5 cut(s)	78, 261, 1639, 1702, 1935
AleI	CACNNNNGTG	1 cut(s)	1076
AloI	GAACNNNNNNTCC	1 cut(s)	28
AluBI	AGCT	8 cut(s)	87, 344, 418, 866, 1028, 1204, 1892, 2061
AluI	AGCT	8 cut(s)	87, 344, 418, 866, 1028, 1204, 1892, 2061
Alw26I	GTCTC	2 cut(s)	1514, 1746
AlwI	GGATC	4 cut(s)	371, 384, 1235, 1947
AlwNI	CAGNNNCTG	3 cut(s)	23, 302, 323
AoxI	GGCC	6 cut(s)	48, 540, 1358, 1425, 1933, 2155
ApeKI	GCWGC	7 cut(s)	84, 344, 1346, 1892, 1994, 2009, 2021
AsiGI	ACCGGT	1 cut(s)	1622
Asp700I	GAANNNNTTC	1 cut(s)	250
AspLEI	GCGC	3 cut(s)	67, 628, 1213
AspS9I	GGNCC	3 cut(s)	1670, 2114, 2188
AsuHPI	GGTGA	4 cut(s)	246, 368, 1637, 1766
AvaII	GGWCC	3 cut(s)	1670, 2114, 2188
BaeGI	GKGCMC	1 cut(s)	105
BalI	TGGCCA	2 cut(s)	50, 542
BamHI	GGATCC	1 cut(s)	376
BarI	GAAGNNNNNNTAC	2 cut(s)	1971, 2003
BbvI	GCAGC	7 cut(s)	96, 331, 1333, 1879, 1996, 2006, 2008
BccI	CCATC	1 cut(s)	1727
BceAI	ACGGC	1 cut(s)	495
BcgI	CGANNNNNNTGC	2 cut(s)	467, 501
BciT130I	CCWGG	5 cut(s)	80, 263, 1641, 1704, 1937
BciVI	GTATCC	1 cut(s)	1682
BclI	TGATCA	1 cut(s)	526
BcoDI	GTCTC	2 cut(s)	1514, 1746
BcuI	ACTAGT	1 cut(s)	1384
BfaI	CTAG	5 cut(s)	278, 362, 773, 1385, 1742
BfmI	CTRYAG	2 cut(s)	1390, 2013
BfoI	RGCGCY	1 cut(s)	68
BfuAI	ACCTGC	1 cut(s)	1058
BfuI	GTATCC	1 cut(s)	1682
BglII	AGATCT	1 cut(s)	335
BisI	GCNGC	7 cut(s)	85, 345, 1347, 1893, 1995, 2010, 2022
BlsI	GCNGC	7 cut(s)	86, 346, 1348, 1894, 1996, 2011, 2023
Bme1390I	CCNGG	5 cut(s)	80, 263, 1641, 1704, 1937
Bme18I	GGWCC	3 cut(s)	1670, 2114, 2188
BmgBI	CACGTC	1 cut(s)	1829
BmgT120I	GGNCC	3 cut(s)	1670, 2114, 2188
BmiI	GGNNCC	4 cut(s)	378, 1286, 1671, 2189
BmrFI	CCNGG	5 cut(s)	80, 263, 1641, 1704, 1937
BmsI	GCATC	5 cut(s)	280, 946, 1440, 2008, 2017
BpmI	CTGGAG	3 cut(s)	567, 1770, 2017
Bpu10I	CCTNAGC	1 cut(s)	2039
BpuEI	CTTGAG	3 cut(s)	440, 1659, 1918
BsaAI	YACGTR	1 cut(s)	837
BsaBI	GATNNNNATC	1 cut(s)	381
BsaHI	GRCGYC	1 cut(s)	1948
BsaJI	CCNNGG	6 cut(s)	79, 175, 681, 1007, 1833, 1951
BsaWI	WCCGGW	1 cut(s)	1622
BsaXI	ACNNNNNCTCC	2 cut(s)	1797, 1827
Bsc4I	CCNNNNNNNGG	3 cut(s)	974, 1080, 2197
Bse118I	RCCGGY	2 cut(s)	1427, 1622
Bse1I	ACTGG	5 cut(s)	217, 550, 1074, 1753, 1874
Bse3DI	GCAATG	1 cut(s)	1012
Bse8I	GATNNNNATC	1 cut(s)	381
BseBI	CCWGG	5 cut(s)	80, 263, 1641, 1704, 1937
BseDI	CCNNGG	6 cut(s)	79, 175, 681, 1007, 1833, 1951
BseGI	GGATG	5 cut(s)	456, 862, 1099, 1181, 1732
BseJI	GATNNNNATC	1 cut(s)	381
BseLI	CCNNNNNNNGG	3 cut(s)	974, 1080, 2197
BseMI	GCAATG	1 cut(s)	1012
BseMII	CTCAG	2 cut(s)	636, 1587
BseNI	ACTGG	5 cut(s)	217, 550, 1074, 1753, 1874
BseRI	GAGGAG	2 cut(s)	1455, 1761
BseSI	GKGCMC	1 cut(s)	105
BseXI	GCAGC	7 cut(s)	96, 331, 1333, 1879, 1996, 2006, 2008
BseYI	CCCAGC	1 cut(s)	1372
Bsh1236I	CGCG	1 cut(s)	2129
BshFI	GGCC	6 cut(s)	50, 542, 1360, 1427, 1935, 2157
BshTI	ACCGGT	1 cut(s)	1622
BsiSI	CCGG	2 cut(s)	1428, 1623
BslFI	GGGAC	4 cut(s)	795, 971, 1683, 2201
BslI	CCNNNNNNNGG	3 cut(s)	974, 1080, 2197
BsmAI	GTCTC	2 cut(s)	1514, 1746
BsmFI	GGGAC	4 cut(s)	795, 971, 1683, 2201
BsmI	GAATGC	1 cut(s)	250
BsnI	GGCC	6 cut(s)	50, 542, 1360, 1427, 1935, 2157
Bsp1286I	GDGCHC	1 cut(s)	105
Bsp143I	GATC	5 cut(s)	335, 376, 526, 1227, 1939
Bsp19I	CCATGG	1 cut(s)	1007
BspACI	CCGC	9 cut(s)	99, 141, 1053, 1081, 1161, 1185, 1407, 1650, 2129
BspANI	GGCC	6 cut(s)	50, 542, 1360, 1427, 1935, 2157
BspCNI	CTCAG	2 cut(s)	637, 1588
BspFNI	CGCG	1 cut(s)	2129
BspHI	TCATGA	1 cut(s)	385
BspLI	GGNNCC	4 cut(s)	378, 1286, 1671, 2189
BspMI	ACCTGC	1 cut(s)	1058
BspPI	GGATC	4 cut(s)	371, 384, 1235, 1947
BspQI	GCTCTTC	1 cut(s)	94
BsrBI	CCGCTC	1 cut(s)	1650
BsrDI	GCAATG	1 cut(s)	1012
BsrFI	RCCGGY	2 cut(s)	1427, 1622
BsrI	ACTGG	5 cut(s)	217, 550, 1074, 1753, 1874
BssAI	RCCGGY	2 cut(s)	1427, 1622
BssECI	CCNNGG	6 cut(s)	79, 175, 681, 1007, 1833, 1951
BssMI	GATC	5 cut(s)	335, 376, 526, 1227, 1939
BssNI	GRCGYC	1 cut(s)	1948
BssT1I	CCWWGG	4 cut(s)	681, 1007, 1833, 1951
Bst2UI	CCWGG	5 cut(s)	80, 263, 1641, 1704, 1937
Bst4CI	ACNGT	6 cut(s)	19, 492, 641, 828, 1195, 1394
Bst6I	CTCTTC	3 cut(s)	94, 582, 1974
BstACI	GRCGYC	1 cut(s)	1948
BstAPI	GCANNNNNTGC	1 cut(s)	494
BstBAI	YACGTR	1 cut(s)	837
BstC8I	GCNNGC	4 cut(s)	101, 630, 998, 1429
BstDEI	CTNAG	5 cut(s)	61, 645, 992, 1596, 2039
BstDSI	CCRYGG	1 cut(s)	1007
BstEII	GGTNACC	1 cut(s)	356
BstENI	CCTNNNNNAGG	1 cut(s)	972
BstF5I	GGATG	5 cut(s)	456, 862, 1099, 1181, 1732
BstFNI	CGCG	1 cut(s)	2129
BstH2I	RGCGCY	1 cut(s)	68
BstHHI	GCGC	3 cut(s)	67, 628, 1213
BstKTI	GATC	5 cut(s)	338, 379, 529, 1230, 1942
BstMAI	GTCTC	2 cut(s)	1514, 1746
BstMBI	GATC	5 cut(s)	335, 376, 526, 1227, 1939
BstMWI	GCNNNNNNNGC	6 cut(s)	494, 548, 1210, 1991, 2018, 2027
BstNI	CCWGG	5 cut(s)	80, 263, 1641, 1704, 1937
BstNSI	RCATGY	2 cut(s)	1000, 1463
BstPI	GGTNACC	1 cut(s)	356
BstSCI	CCNGG	5 cut(s)	78, 261, 1639, 1702, 1935
BstSFI	CTRYAG	2 cut(s)	1390, 2013
BstSLI	GKGCMC	1 cut(s)	105
BstSNI	TACGTA	1 cut(s)	837
BstUI	CGCG	1 cut(s)	2129
BstV1I	GCAGC	7 cut(s)	96, 331, 1333, 1879, 1996, 2006, 2008
BstX2I	RGATCY	2 cut(s)	335, 376
BstXI	CCANNNNNNTGG	1 cut(s)	2005
BstYI	RGATCY	2 cut(s)	335, 376
BsuI	GTATCC	1 cut(s)	1682
BsuRI	GGCC	6 cut(s)	50, 542, 1360, 1427, 1935, 2157
BtgI	CCRYGG	1 cut(s)	1007
BtgZI	GCGATG	1 cut(s)	701
BtrI	CACGTC	1 cut(s)	1829
BtsCI	GGATG	5 cut(s)	456, 862, 1099, 1181, 1732
BtsIMutI	CAGTG	5 cut(s)	488, 543, 1081, 1441, 1746
BveI	ACCTGC	1 cut(s)	1058
Cac8I	GCNNGC	4 cut(s)	101, 630, 998, 1429
CaiI	CAGNNNCTG	3 cut(s)	23, 302, 323
CciI	TCATGA	1 cut(s)	385
CfoI	GCGC	3 cut(s)	67, 628, 1213
Cfr10I	RCCGGY	2 cut(s)	1427, 1622
Cfr13I	GGNCC	3 cut(s)	1670, 2114, 2188
CseI	GACGC	2 cut(s)	968, 1956
Csp6I	GTAC	2 cut(s)	965, 1240
CspAI	ACCGGT	1 cut(s)	1622
CspCI	CAANNNNNGTGG	2 cut(s)	540, 575
CviAII	CATG	9 cut(s)	386, 507, 913, 997, 1008, 1243, 1460, 1489, 2173
CviQI	GTAC	2 cut(s)	965, 1240
DdeI	CTNAG	5 cut(s)	61, 645, 992, 1596, 2039
DpnI	GATC	5 cut(s)	337, 378, 528, 1229, 1941
DpnII	GATC	5 cut(s)	335, 376, 526, 1227, 1939
DrdI	GACNNNNNNGTC	1 cut(s)	789
DseDI	GACNNNNNNGTC	1 cut(s)	789
EaeI	YGGCCR	3 cut(s)	48, 540, 1933
Eam1104I	CTCTTC	3 cut(s)	94, 582, 1974
EarI	CTCTTC	3 cut(s)	94, 582, 1974
EciI	GGCGGA	1 cut(s)	1174
Eco105I	TACGTA	1 cut(s)	837
Eco130I	CCWWGG	4 cut(s)	681, 1007, 1833, 1951
Eco32I	GATATC	1 cut(s)	663
Eco47I	GGWCC	3 cut(s)	1670, 2114, 2188
Eco57I	CTGAAG	5 cut(s)	95, 279, 324, 465, 2076
Eco91I	GGTNACC	1 cut(s)	356
EcoNI	CCTNNNNNAGG	1 cut(s)	972
EcoO109I	RGGNCCY	1 cut(s)	1670
EcoO65I	GGTNACC	1 cut(s)	356
EcoRII	CCWGG	5 cut(s)	78, 261, 1639, 1702, 1935
EcoRV	GATATC	1 cut(s)	663
EcoT14I	CCWWGG	4 cut(s)	681, 1007, 1833, 1951
ErhI	CCWWGG	4 cut(s)	681, 1007, 1833, 1951
FaeI	CATG	9 cut(s)	389, 510, 916, 1000, 1011, 1246, 1463, 1492, 2176
FaqI	GGGAC	4 cut(s)	795, 971, 1683, 2201
FatI	CATG	9 cut(s)	385, 506, 912, 996, 1007, 1242, 1459, 1488, 2172
FauI	CCCGC	1 cut(s)	92
FbaI	TGATCA	1 cut(s)	526
FblI	GTMKAC	1 cut(s)	1389
Fnu4HI	GCNGC	7 cut(s)	85, 345, 1347, 1893, 1995, 2010, 2022
FokI	GGATG	5 cut(s)	463, 869, 1106, 1168, 1739
Fsp4HI	GCNGC	7 cut(s)	85, 345, 1347, 1893, 1995, 2010, 2022
FspBI	CTAG	5 cut(s)	278, 362, 773, 1385, 1742
GlaI	GCGC	3 cut(s)	66, 627, 1212
GluI	GCNGC	7 cut(s)	85, 345, 1347, 1893, 1995, 2010, 2022
GsaI	CCCAGC	1 cut(s)	1376
GsuI	CTGGAG	3 cut(s)	567, 1770, 2017
HaeII	RGCGCY	1 cut(s)	68
HaeIII	GGCC	6 cut(s)	50, 542, 1360, 1427, 1935, 2157
HapII	CCGG	2 cut(s)	1428, 1623
HgaI	GACGC	2 cut(s)	968, 1956
HhaI	GCGC	3 cut(s)	67, 628, 1213
Hin1I	GRCGYC	1 cut(s)	1948
Hin1II	CATG	9 cut(s)	389, 510, 916, 1000, 1011, 1246, 1463, 1492, 2176
Hin6I	GCGC	3 cut(s)	65, 626, 1211
HinP1I	GCGC	3 cut(s)	65, 626, 1211
HincII	GTYRAC	1 cut(s)	40
HindII	GTYRAC	1 cut(s)	40
HindIII	AAGCTT	2 cut(s)	1202, 2059
HinfI	GANTC	9 cut(s)	299, 790, 809, 1148, 1257, 1613, 1699, 2164, 2193
HpaII	CCGG	2 cut(s)	1428, 1623
HphI	GGTGA	4 cut(s)	246, 368, 1637, 1766
Hpy166II	GTNNAC	3 cut(s)	40, 637, 1390
Hpy188III	TCNNGA	6 cut(s)	135, 323, 386, 644, 1542, 1820
Hpy8I	GTNNAC	3 cut(s)	40, 637, 1390
Hpy99I	CGWCG	3 cut(s)	1548, 1950, 2187
HpyAV	CCTTC	8 cut(s)	119, 240, 405, 440, 731, 1084, 1464, 1817
HpyCH4III	ACNGT	6 cut(s)	19, 492, 641, 828, 1195, 1394
HpyCH4IV	ACGT	6 cut(s)	75, 268, 558, 836, 1828, 1866
HpyCH4V	TGCA	4 cut(s)	488, 598, 937, 1366
HpyF10VI	GCNNNNNNNGC	6 cut(s)	494, 548, 1210, 1991, 2018, 2027
HpyF3I	CTNAG	5 cut(s)	61, 645, 992, 1596, 2039
HpySE526I	ACGT	6 cut(s)	75, 268, 558, 836, 1828, 1866
Hsp92I	GRCGYC	1 cut(s)	1948
Hsp92II	CATG	9 cut(s)	389, 510, 916, 1000, 1011, 1246, 1463, 1492, 2176
HspAI	GCGC	3 cut(s)	65, 626, 1211
KroI	GCCGGC	1 cut(s)	1427
KroNI	GCCGGC	1 cut(s)	1429
Ksp22I	TGATCA	1 cut(s)	526
Kzo9I	GATC	5 cut(s)	335, 376, 526, 1227, 1939
LguI	GCTCTTC	1 cut(s)	94
LmnI	GCTCC	2 cut(s)	548, 1774
Lsp1109I	GCAGC	7 cut(s)	96, 331, 1333, 1879, 1996, 2006, 2008
LweI	GCATC	5 cut(s)	280, 946, 1440, 2008, 2017
MaeI	CTAG	5 cut(s)	278, 362, 773, 1385, 1742
MaeII	ACGT	6 cut(s)	75, 268, 558, 836, 1828, 1866
MaeIII	GTNAC	3 cut(s)	273, 356, 1149
MalI	GATC	5 cut(s)	337, 378, 528, 1229, 1941
MbiI	CCGCTC	1 cut(s)	1650
MboI	GATC	5 cut(s)	335, 376, 526, 1227, 1939
MboII	GAAGA	7 cut(s)	81, 242, 330, 599, 680, 1991, 2084
MfeI	CAATTG	2 cut(s)	1482, 1959
MflI	RGATCY	2 cut(s)	335, 376
MhlI	GDGCHC	1 cut(s)	105
MlsI	TGGCCA	2 cut(s)	50, 542
MluNI	TGGCCA	2 cut(s)	50, 542
MlyI	GAGTC	4 cut(s)	799, 1157, 2158, 2202
MmeI	TCCRAC	4 cut(s)	147, 442, 1742, 2192
Mox20I	TGGCCA	2 cut(s)	50, 542
MroNI	GCCGGC	1 cut(s)	1427
MroXI	GAANNNNTTC	1 cut(s)	250
MscI	TGGCCA	2 cut(s)	50, 542
MseI	TTAA	4 cut(s)	1251, 1514, 1557, 1853
MslI	CAYNNNNRTG	2 cut(s)	1017, 1076
Msp20I	TGGCCA	2 cut(s)	50, 542
MspA1I	CMGCKG	2 cut(s)	344, 1161
MspI	CCGG	2 cut(s)	1428, 1623
MspR9I	CCNGG	5 cut(s)	80, 263, 1641, 1704, 1937
MunI	CAATTG	2 cut(s)	1482, 1959
Mva1269I	GAATGC	1 cut(s)	250
MvaI	CCWGG	5 cut(s)	80, 263, 1641, 1704, 1937
MvnI	CGCG	1 cut(s)	2129
MwoI	GCNNNNNNNGC	6 cut(s)	494, 548, 1210, 1991, 2018, 2027
NaeI	GCCGGC	1 cut(s)	1429
NcoI	CCATGG	1 cut(s)	1007
NdeII	GATC	5 cut(s)	335, 376, 526, 1227, 1939
NgoMIV	GCCGGC	1 cut(s)	1427
NlaIII	CATG	9 cut(s)	389, 510, 916, 1000, 1011, 1246, 1463, 1492, 2176
NlaIV	GGNNCC	4 cut(s)	378, 1286, 1671, 2189
NmeAIII	GCCGAG	1 cut(s)	200
NmuCI	GTSAC	2 cut(s)	356, 1149
NspI	RCATGY	2 cut(s)	1000, 1463
OliI	CACNNNNGTG	1 cut(s)	1076
PaeI	GCATGC	1 cut(s)	1000
PagI	TCATGA	1 cut(s)	385
PciI	ACATGT	1 cut(s)	1459
PciSI	GCTCTTC	1 cut(s)	94
PcsI	WCGNNNNNNNCGW	2 cut(s)	1286, 2188
PctI	GAATGC	1 cut(s)	250
PdiI	GCCGGC	1 cut(s)	1429
PdmI	GAANNNNTTC	1 cut(s)	250
PfeI	GAWTC	5 cut(s)	299, 809, 1257, 1613, 1699
PflFI	GACNNNGTC	1 cut(s)	2192
PfoI	TCCNGGA	1 cut(s)	261
PinAI	ACCGGT	1 cut(s)	1622
PkrI	GCNGC	7 cut(s)	86, 346, 1348, 1894, 1996, 2011, 2023
PleI	GAGTC	4 cut(s)	798, 1156, 2158, 2201
PpsI	GAGTC	4 cut(s)	798, 1156, 2158, 2201
Ppu21I	YACGTR	1 cut(s)	837
PpuMI	RGGWCCY	1 cut(s)	1670
PscI	ACATGT	1 cut(s)	1459
PsiI	TTATAA	1 cut(s)	411
Psp1406I	AACGTT	1 cut(s)	1866
Psp5II	RGGWCCY	1 cut(s)	1670
Psp6I	CCWGG	5 cut(s)	78, 261, 1639, 1702, 1935
PspEI	GGTNACC	1 cut(s)	356
PspFI	CCCAGC	1 cut(s)	1372
PspGI	CCWGG	5 cut(s)	78, 261, 1639, 1702, 1935
PspN4I	GGNNCC	4 cut(s)	378, 1286, 1671, 2189
PspPI	GGNCC	3 cut(s)	1670, 2114, 2188
PspPPI	RGGWCCY	1 cut(s)	1670
PsrI	GAACNNNNNNTAC	2 cut(s)	258, 290
PstNI	CAGNNNCTG	3 cut(s)	23, 302, 323
PsuI	RGATCY	2 cut(s)	335, 376
PsyI	GACNNNGTC	1 cut(s)	2192
PvuII	CAGCTG	1 cut(s)	344
RsaI	GTAC	2 cut(s)	966, 1241
RsaNI	GTAC	2 cut(s)	965, 1240
RseI	CAYNNNNRTG	2 cut(s)	1017, 1076
SapI	GCTCTTC	1 cut(s)	94
SaqAI	TTAA	4 cut(s)	1251, 1514, 1557, 1853
SatI	GCNGC	7 cut(s)	85, 345, 1347, 1893, 1995, 2010, 2022
Sau3AI	GATC	5 cut(s)	335, 376, 526, 1227, 1939
Sau96I	GGNCC	3 cut(s)	1670, 2114, 2188
SchI	GAGTC	4 cut(s)	799, 1157, 2158, 2202
ScrFI	CCNGG	5 cut(s)	80, 263, 1641, 1704, 1937
SduI	GDGCHC	1 cut(s)	105
SfaNI	GCATC	5 cut(s)	280, 946, 1440, 2008, 2017
SfcI	CTRYAG	2 cut(s)	1390, 2013
SinI	GGWCC	3 cut(s)	1670, 2114, 2188
SmiMI	CAYNNNNRTG	2 cut(s)	1017, 1076
SmlI	CTYRAG	3 cut(s)	419, 1674, 1897
SmoI	CTYRAG	3 cut(s)	419, 1674, 1897
SnaBI	TACGTA	1 cut(s)	837
SpeI	ACTAGT	1 cut(s)	1384
SphI	GCATGC	1 cut(s)	1000
SsiI	CCGC	9 cut(s)	99, 141, 1053, 1081, 1161, 1185, 1407, 1650, 2129
SspMI	CTAG	5 cut(s)	278, 362, 773, 1385, 1742
StyD4I	CCNGG	5 cut(s)	78, 261, 1639, 1702, 1935
StyI	CCWWGG	4 cut(s)	681, 1007, 1833, 1951
TaaI	ACNGT	6 cut(s)	19, 492, 641, 828, 1195, 1394
TaiI	ACGT	6 cut(s)	78, 271, 561, 839, 1831, 1869
TaqI	TCGA	7 cut(s)	398, 572, 585, 756, 1543, 1588, 2182
TaqII	GACCGA	1 cut(s)	2205
TfiI	GAWTC	5 cut(s)	299, 809, 1257, 1613, 1699
Tru1I	TTAA	4 cut(s)	1251, 1514, 1557, 1853
Tru9I	TTAA	4 cut(s)	1251, 1514, 1557, 1853
TscAI	CASTG	5 cut(s)	495, 550, 1081, 1441, 1753
TseFI	GTSAC	2 cut(s)	356, 1149
TseI	GCWGC	7 cut(s)	84, 344, 1346, 1892, 1994, 2009, 2021
Tsp45I	GTSAC	2 cut(s)	356, 1149
TspGWI	ACGGA	3 cut(s)	107, 183, 1532
TspRI	CASTG	5 cut(s)	495, 550, 1081, 1441, 1753
Tth111I	GACNNNGTC	1 cut(s)	2192
VpaK11BI	GGWCC	3 cut(s)	1670, 2114, 2188
XagI	CCTNNNNNAGG	1 cut(s)	972
XceI	RCATGY	2 cut(s)	1000, 1463
XmiI	GTMKAC	1 cut(s)	1389
XmnI	GAANNNNTTC	1 cut(s)	250
XspI	CTAG	5 cut(s)	278, 362, 773, 1385, 1742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.