Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0001017

Physical Location & Seq

Genomic Coordinates Forward (+)

31393092 .. 31425610

Gene Structure 32519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG177000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGGATACCCATTACGACCGGCCCTTCAGTTCCTTTTTCCCAACTGCAAATTCAGAAGCACACAACTCTTTCATCATAGAAAGTGTCATGGGAGGTGAGCTGGGCTTCCTCAGAATCACAGATGAAGTGCAGATAAGAAGGTATTCACCATTTCTAGAAAGTGCATTACTAGATGGTAATGGTACCTTGGTAGCCGATGAGTGGCAGGCAGTTCCTGATATTTGGAGAACTTCAGCTGAGAAATATGGGGATCGTGTAGCATTAACAGATCCGTACCATGATCCACCTTCAAATATGACCTATAAACAGATAAGAAACCTCTGGGATGTTGTTCCTGCTGAAATTGGGGACAGATTTCTCAGTATGCTTCCACCATGGCATGCCTATGAACGAGCTGCTGAGTATTTCACATTTACAAATGGAATTGAACAAGTATACACAACTGTAAAGAACTTGAAGGGGACATATTTGACAAGGAACCAGAAGCAGCCTTCATATTATGCTTCACTAGTTGATTGGATCGGGGCAAGGATTGTTGCTGCAATATTATGGCCTTTGCATGTGTTGGGAACAAAACTAGTGTATAGTAAAATTCACTCTGCTATTGGAATATCAAAGGCTGGCATCAGTGCAGGAGGTAGTTTGCCAGCACATATTGATAAATTTTTTGAGGCAATAGGCGTAAAACTGCAGAATGGATATGGTTTAACAGAGAGTTCTCCTGCTGTTGCTGCTCGGAGACCAAACTGTAATGTTCTTGGTTCAGTTGGGCATCCACTTCAACATACAGAGTTCAAAGTTGTAGACTCTGAAACTGGTGAAGTTCTCCCACCTGGTTCAAGTGGCATTGTAAACGTCAGGGGTCCGCAAGTGATGAAAGGATATTACAAGAATCCAGATGCTACAAAGCAAGTATTAGATGAGGATGGTTGGCTAAGTACTGGAGATATTGGTTGGATTGCTCCTCACCACTCAATAGGTCGAAGCCGTCGTTGTGGAGGTGTTGTTGTCCTTGAAGGACGTGCTAAGGATACTATAGTCCTTTCAACAGGAGAAAACGTTGAACCCGTAGAGCTTGAGGAAGCTGCCATGAGAAGTAGTCTAATTCAACAAATTGTCGTCATTGGCCAGGATCAACGGCGCCTTGGGGCAATAATTGTTCCAAACAAAGAAGAGGCCTTACTTGCAGCGACAAAGACGTTGAGTGTTGATGCTAATGTATCCGACCTAAGTCAGGACAAATTGACAGGCTTGCTATATGAAGAACTGAGAAAATGGACTTCATGGTGTTCATTTCAAATTGGACCAATCTTGATTGTGGACGAGCCCTTTACGATTGATAGTGGTTTGATGACTCCAACTATGAAAATTCGAAGAGACAAAGTTGTGGCACAGTTCAAGGAACAAATAGATGAACTCTACAAGAAAAATTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0008922 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016053 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0030497 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

478

Amino Acids

53.0

Weight (kDa)

5.73

Isoelectric Point (pI)

40.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	105 - 296	9.5e-27	AMP-binding enzyme
AMP-binding_C_3	PF23562	344 - 397	2.2e-10	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23790 AT4G14070
fragaria_vesca	FvH4_4g13140 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151
malus_domestica	MD04G1018700.v1.1 MD04G1018900.v1.1
prunus_persica	Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G187500_v2.0.a1
pyrus_communis	pycom04g01500 pycom04g01510
rosa_chinensis	RchiOBHm_Chr4g0412911 RchiOBHm_Chr4g0413021 RchiOBHm_Chr4g0413231
rosa_laevigata	RLG00000008230 RLG00000008244 RLG00000008246
rosa_multiflora	Rmu_sc0000717.1_g000026 Rmu_sc0005849.1_g000011 Rmu_sc0021560.1_g000001
rosa_roxburghii	Rroxscaffold_5G00357150 Rroxscaffold_5G00357210
rosa_rugosa	Rorug04G0117500 Rorug04G0117600 Rorug04G0117700 Rorug04G0117800 Rorug04G0117900 Rorug04G0118000 Rorug04G0118000 Rorug04G0118100 Rorug04G0118100 Rorug04G0118600
rosa_samantha	Rh4AG176400 Rh4AG177100 Rh4AG178600 Rh4BG177000 Rh4BG177900 Rh4CG187400 Rh4CG188100 Rh4CG189200 Rh4DG173700 Rh4DG173900
rosa_wichuraiana	Rw4G014810 Rw4G014820 Rw4G014850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	182
AccB1I	GGYRCC	2 cut(s)	182, 1140
AccI	GTMKAC	2 cut(s)	435, 804
AciI	CCGC	1 cut(s)	866
AclI	AACGTT	1 cut(s)	1059
AclWI	GGATC	5 cut(s)	258, 263, 275, 527, 1140
AcoI	YGGCCR	1 cut(s)	1126
AcsI	RAATTY	5 cut(s)	49, 591, 662, 1368, 1429
AcuI	CTGAAG	2 cut(s)	10, 216
AcyI	GRCGYC	1 cut(s)	1141
AfaI	GTAC	3 cut(s)	184, 275, 940
AfiI	CCNNNNNNNGG	2 cut(s)	201, 1234
AhlI	ACTAGT	2 cut(s)	508, 577
AjiI	CACGTC	1 cut(s)	1022
AjnI	CCWGG	2 cut(s)	832, 1128
AjuI	GAANNNNNNNTTGG	2 cut(s)	34, 66
AluBI	AGCT	5 cut(s)	100, 236, 395, 1075, 1085
AluI	AGCT	5 cut(s)	100, 236, 395, 1075, 1085
Alw26I	GTCTC	2 cut(s)	733, 1371
AlwI	GGATC	5 cut(s)	258, 263, 275, 527, 1140
AlwNI	CAGNNNCTG	1 cut(s)	215
AoxI	GGCC	4 cut(s)	20, 551, 1126, 1176
ApeKI	GCWGC	6 cut(s)	395, 487, 539, 731, 1085, 1187
ApoI	RAATTY	5 cut(s)	49, 591, 662, 1368, 1429
Asp700I	GAANNNNTTC	1 cut(s)	142
Asp718I	GGTACC	1 cut(s)	182
AspLEI	GCGC	1 cut(s)	1143
AspS9I	GGNCC	3 cut(s)	21, 863, 1304
AsuHPI	GGTGA	4 cut(s)	107, 138, 830, 959
AsuII	TTCGAA	1 cut(s)	1372
AvaII	GGWCC	2 cut(s)	863, 1304
BaeI	ACNNNNGTAYC	4 cut(s)	174, 207, 1023, 1056
BalI	TGGCCA	1 cut(s)	1128
BanI	GGYRCC	2 cut(s)	182, 1140
BanII	GRGCYC	1 cut(s)	1329
BarI	GAAGNNNNNNTAC	2 cut(s)	1164, 1196
BbvI	GCAGC	6 cut(s)	382, 499, 526, 718, 1072, 1199
BccI	CCATC	2 cut(s)	167, 920
BceAI	ACGGC	2 cut(s)	972, 1154
BciT130I	CCWGG	2 cut(s)	834, 1130
BciVI	GTATCC	2 cut(s)	1024, 1231
BcoDI	GTCTC	2 cut(s)	733, 1371
BcuI	ACTAGT	2 cut(s)	508, 577
BfaI	CTAG	4 cut(s)	155, 170, 509, 578
BfmI	CTRYAG	2 cut(s)	689, 1035
BfoI	RGCGCY	1 cut(s)	1144
BfuI	GTATCC	2 cut(s)	1024, 1231
BisI	GCNGC	6 cut(s)	396, 488, 540, 732, 1086, 1188
BlsI	GCNGC	6 cut(s)	397, 489, 541, 733, 1087, 1189
BmcAI	AGTACT	1 cut(s)	940
Bme1390I	CCNGG	2 cut(s)	834, 1130
Bme18I	GGWCC	2 cut(s)	863, 1304
BmgBI	CACGTC	1 cut(s)	1022
BmgT120I	GGNCC	3 cut(s)	21, 863, 1304
BmiI	GGNNCC	4 cut(s)	184, 479, 864, 1142
BmrFI	CCNGG	2 cut(s)	834, 1130
BmsI	GCATC	4 cut(s)	633, 781, 889, 1201
BoxI	GACNNNNGTC	1 cut(s)	1230
BpmI	CTGGAG	1 cut(s)	963
Bpu10I	CCTNAGC	1 cut(s)	1026
Bpu14I	TTCGAA	1 cut(s)	1372
BpuEI	CTTGAG	1 cut(s)	1097
BsaHI	GRCGYC	1 cut(s)	1141
BsaI	GGTCTC	1 cut(s)	733
BsaJI	CCNNGG	3 cut(s)	186, 374, 1144
BsaXI	ACNNNNNCTCC	4 cut(s)	990, 1020, 1044, 1074
Bsc4I	CCNNNNNNNGG	2 cut(s)	201, 1234
Bse118I	RCCGGY	1 cut(s)	18
Bse1I	ACTGG	2 cut(s)	820, 946
BseBI	CCWGG	2 cut(s)	834, 1130
BseDI	CCNNGG	3 cut(s)	186, 374, 1144
BseGI	GGATG	3 cut(s)	331, 772, 931
BseLI	CCNNNNNNNGG	2 cut(s)	201, 1234
BseMII	CTCAG	5 cut(s)	124, 228, 373, 390, 1259
BseNI	ACTGG	2 cut(s)	820, 946
BseRI	GAGGAG	1 cut(s)	954
BseXI	GCAGC	6 cut(s)	382, 499, 526, 718, 1072, 1199
BseYI	CCCAGC	1 cut(s)	100
BsgI	GTGCAG	2 cut(s)	149, 651
Bsh1285I	CGRYCG	1 cut(s)	19
BshFI	GGCC	4 cut(s)	22, 553, 1128, 1178
BshNI	GGYRCC	2 cut(s)	182, 1140
BsiEI	CGRYCG	1 cut(s)	19
BsiSI	CCGG	1 cut(s)	19
BslFI	GGGAC	2 cut(s)	362, 475
BslI	CCNNNNNNNGG	2 cut(s)	201, 1234
BsmAI	GTCTC	2 cut(s)	733, 1371
BsmFI	GGGAC	2 cut(s)	362, 475
BsnI	GGCC	4 cut(s)	22, 553, 1128, 1178
Bso31I	GGTCTC	1 cut(s)	733
Bsp119I	TTCGAA	1 cut(s)	1372
Bsp1286I	GDGCHC	1 cut(s)	1329
Bsp143I	GATC	5 cut(s)	250, 268, 280, 519, 1132
Bsp19I	CCATGG	1 cut(s)	374
BspACI	CCGC	1 cut(s)	866
BspANI	GGCC	4 cut(s)	22, 553, 1128, 1178
BspCNI	CTCAG	5 cut(s)	123, 229, 372, 391, 1260
BspLI	GGNNCC	4 cut(s)	184, 479, 864, 1142
BspMAI	CTGCAG	1 cut(s)	693
BspPI	GGATC	5 cut(s)	258, 263, 275, 527, 1140
BspT104I	TTCGAA	1 cut(s)	1372
BspT107I	GGYRCC	2 cut(s)	182, 1140
BspTNI	GGTCTC	1 cut(s)	733
BsrFI	RCCGGY	1 cut(s)	18
BsrI	ACTGG	2 cut(s)	820, 946
BssAI	RCCGGY	1 cut(s)	18
BssECI	CCNNGG	3 cut(s)	186, 374, 1144
BssMI	GATC	5 cut(s)	250, 268, 280, 519, 1132
BssNAI	GTATAC	1 cut(s)	436
BssNI	GRCGYC	1 cut(s)	1141
BssT1I	CCWWGG	3 cut(s)	186, 374, 1144
Bst1107I	GTATAC	1 cut(s)	436
Bst2UI	CCWGG	2 cut(s)	834, 1130
Bst4CI	ACNGT	3 cut(s)	445, 749, 1395
Bst6I	CTCTTC	2 cut(s)	1167, 1369
BstACI	GRCGYC	1 cut(s)	1141
BstBI	TTCGAA	1 cut(s)	1372
BstC8I	GCNNGC	5 cut(s)	207, 381, 622, 648, 1253
BstDEI	CTNAG	9 cut(s)	110, 237, 359, 399, 935, 1026, 1229, 1268, 1434
BstDSI	CCRYGG	1 cut(s)	374
BstENI	CCTNNNNNAGG	1 cut(s)	1232
BstF5I	GGATG	3 cut(s)	331, 772, 931
BstH2I	RGCGCY	1 cut(s)	1144
BstHHI	GCGC	1 cut(s)	1143
BstKTI	GATC	5 cut(s)	253, 271, 283, 522, 1135
BstMAI	GTCTC	2 cut(s)	733, 1371
BstMBI	GATC	5 cut(s)	250, 268, 280, 519, 1132
BstMCI	CGRYCG	1 cut(s)	19
BstMWI	GCNNNNNNNGC	2 cut(s)	731, 1184
BstNI	CCWGG	2 cut(s)	834, 1130
BstNSI	RCATGY	2 cut(s)	383, 563
BstPAI	GACNNNNGTC	1 cut(s)	1230
BstSCI	CCNGG	2 cut(s)	832, 1128
BstSFI	CTRYAG	2 cut(s)	689, 1035
BstV1I	GCAGC	6 cut(s)	382, 499, 526, 718, 1072, 1199
BstX2I	RGATCY	1 cut(s)	268
BstYI	RGATCY	1 cut(s)	268
BstZ17I	GTATAC	1 cut(s)	436
BsuI	GTATCC	2 cut(s)	1024, 1231
BsuRI	GGCC	4 cut(s)	22, 553, 1128, 1178
BtgI	CCRYGG	1 cut(s)	374
BtrI	CACGTC	1 cut(s)	1022
BtsCI	GGATG	3 cut(s)	331, 772, 931
BtsIMutI	CAGTG	1 cut(s)	634
Cac8I	GCNNGC	5 cut(s)	207, 381, 622, 648, 1253
CaiI	CAGNNNCTG	1 cut(s)	215
CfoI	GCGC	1 cut(s)	1143
Cfr10I	RCCGGY	1 cut(s)	18
Cfr13I	GGNCC	3 cut(s)	21, 863, 1304
CsiI	ACCWGGT	1 cut(s)	832
Csp6I	GTAC	3 cut(s)	183, 274, 939
CviAII	CATG	7 cut(s)	88, 278, 375, 380, 560, 1090, 1284
CviQI	GTAC	3 cut(s)	183, 274, 939
DdeI	CTNAG	9 cut(s)	110, 237, 359, 399, 935, 1026, 1229, 1268, 1434
DinI	GGCGCC	1 cut(s)	1142
DpnI	GATC	5 cut(s)	252, 270, 282, 521, 1134
DpnII	GATC	5 cut(s)	250, 268, 280, 519, 1132
EaeI	YGGCCR	1 cut(s)	1126
Eam1104I	CTCTTC	2 cut(s)	1167, 1369
EarI	CTCTTC	2 cut(s)	1167, 1369
Eco130I	CCWWGG	3 cut(s)	186, 374, 1144
Eco147I	AGGCCT	1 cut(s)	1178
Eco24I	GRGCYC	1 cut(s)	1329
Eco31I	GGTCTC	1 cut(s)	733
Eco47I	GGWCC	2 cut(s)	863, 1304
Eco57I	CTGAAG	2 cut(s)	10, 216
EcoNI	CCTNNNNNAGG	1 cut(s)	1232
EcoRII	CCWGG	2 cut(s)	832, 1128
EcoT14I	CCWWGG	3 cut(s)	186, 374, 1144
EcoT38I	GRGCYC	1 cut(s)	1329
EgeI	GGCGCC	1 cut(s)	1142
EheI	GGCGCC	1 cut(s)	1142
ErhI	CCWWGG	3 cut(s)	186, 374, 1144
FaeI	CATG	7 cut(s)	91, 281, 378, 383, 563, 1093, 1287
FaqI	GGGAC	2 cut(s)	362, 475
FatI	CATG	7 cut(s)	87, 277, 374, 379, 559, 1089, 1283
FblI	GTMKAC	2 cut(s)	435, 804
Fnu4HI	GCNGC	6 cut(s)	396, 488, 540, 732, 1086, 1188
FokI	GGATG	3 cut(s)	338, 759, 938
FriOI	GRGCYC	1 cut(s)	1329
Fsp4HI	GCNGC	6 cut(s)	396, 488, 540, 732, 1086, 1188
FspBI	CTAG	4 cut(s)	155, 170, 509, 578
GlaI	GCGC	1 cut(s)	1142
GluI	GCNGC	6 cut(s)	396, 488, 540, 732, 1086, 1188
GsaI	CCCAGC	1 cut(s)	104
GsuI	CTGGAG	1 cut(s)	963
HaeII	RGCGCY	1 cut(s)	1144
HaeIII	GGCC	4 cut(s)	22, 553, 1128, 1178
HapII	CCGG	1 cut(s)	19
HhaI	GCGC	1 cut(s)	1143
Hin1I	GRCGYC	1 cut(s)	1141
Hin1II	CATG	7 cut(s)	91, 281, 378, 383, 563, 1093, 1287
Hin6I	GCGC	1 cut(s)	1141
HinP1I	GCGC	1 cut(s)	1141
HinfI	GANTC	4 cut(s)	114, 806, 892, 1354
HpaII	CCGG	1 cut(s)	19
HphI	GGTGA	4 cut(s)	107, 138, 830, 959
Hpy166II	GTNNAC	4 cut(s)	436, 805, 853, 1321
Hpy188I	TCNGA	5 cut(s)	55, 113, 738, 811, 1225
Hpy188III	TCNNGA	5 cut(s)	155, 215, 896, 1235, 1312
Hpy8I	GTNNAC	4 cut(s)	436, 805, 853, 1321
Hpy99I	CGWCG	1 cut(s)	993
HpyAV	CCTTC	6 cut(s)	34, 132, 297, 451, 501, 1010
HpyCH4III	ACNGT	3 cut(s)	445, 749, 1395
HpyCH4IV	ACGT	4 cut(s)	855, 1021, 1059, 1199
HpyCH4V	TGCA	8 cut(s)	47, 130, 164, 542, 559, 632, 691, 1187
HpyF10VI	GCNNNNNNNGC	2 cut(s)	731, 1184
HpyF3I	CTNAG	9 cut(s)	110, 237, 359, 399, 935, 1026, 1229, 1268, 1434
HpySE526I	ACGT	4 cut(s)	855, 1021, 1059, 1199
Hsp92I	GRCGYC	1 cut(s)	1141
Hsp92II	CATG	7 cut(s)	91, 281, 378, 383, 563, 1093, 1287
HspAI	GCGC	1 cut(s)	1141
KasI	GGCGCC	1 cut(s)	1140
KpnI	GGTACC	1 cut(s)	186
Kzo9I	GATC	5 cut(s)	250, 268, 280, 519, 1132
LmnI	GCTCC	1 cut(s)	967
Lsp1109I	GCAGC	6 cut(s)	382, 499, 526, 718, 1072, 1199
LweI	GCATC	4 cut(s)	633, 781, 889, 1201
MabI	ACCWGGT	1 cut(s)	832
MaeI	CTAG	4 cut(s)	155, 170, 509, 578
MaeII	ACGT	4 cut(s)	855, 1021, 1059, 1199
MalI	GATC	5 cut(s)	252, 270, 282, 521, 1134
MboI	GATC	5 cut(s)	250, 268, 280, 519, 1132
MboII	GAAGA	3 cut(s)	1184, 1274, 1386
MflI	RGATCY	1 cut(s)	268
MhlI	GDGCHC	1 cut(s)	1329
MlsI	TGGCCA	1 cut(s)	1128
MluNI	TGGCCA	1 cut(s)	1128
Mly113I	GGCGCC	1 cut(s)	1141
MlyI	GAGTC	2 cut(s)	800, 1348
MmeI	TCCRAC	3 cut(s)	935, 1248, 1382
Mox20I	TGGCCA	1 cut(s)	1128
MroXI	GAANNNNTTC	1 cut(s)	142
MscI	TGGCCA	1 cut(s)	1128
MseI	TTAA	2 cut(s)	263, 707
MslI	CAYNNNNRTG	1 cut(s)	384
Msp20I	TGGCCA	1 cut(s)	1128
MspA1I	CMGCKG	1 cut(s)	236
MspI	CCGG	1 cut(s)	19
MspR9I	CCNGG	2 cut(s)	834, 1130
MvaI	CCWGG	2 cut(s)	834, 1130
MwoI	GCNNNNNNNGC	2 cut(s)	731, 1184
NarI	GGCGCC	1 cut(s)	1141
NcoI	CCATGG	1 cut(s)	374
NdeII	GATC	5 cut(s)	250, 268, 280, 519, 1132
NlaIII	CATG	7 cut(s)	91, 281, 378, 383, 563, 1093, 1287
NlaIV	GGNNCC	4 cut(s)	184, 479, 864, 1142
NspI	RCATGY	2 cut(s)	383, 563
NspV	TTCGAA	1 cut(s)	1372
PaeI	GCATGC	1 cut(s)	383
PceI	AGGCCT	1 cut(s)	1178
PcsI	WCGNNNNNNNCGW	2 cut(s)	988, 1065
PdmI	GAANNNNTTC	1 cut(s)	142
PfeI	GAWTC	2 cut(s)	114, 892
PkrI	GCNGC	6 cut(s)	397, 489, 541, 733, 1087, 1189
PleI	GAGTC	2 cut(s)	800, 1348
PluTI	GGCGCC	1 cut(s)	1144
PpsI	GAGTC	2 cut(s)	800, 1348
PshAI	GACNNNNGTC	1 cut(s)	1230
Psp1406I	AACGTT	1 cut(s)	1059
Psp6I	CCWGG	2 cut(s)	832, 1128
PspFI	CCCAGC	1 cut(s)	100
PspGI	CCWGG	2 cut(s)	832, 1128
PspN4I	GGNNCC	4 cut(s)	184, 479, 864, 1142
PspPI	GGNCC	3 cut(s)	21, 863, 1304
PstI	CTGCAG	1 cut(s)	693
PstNI	CAGNNNCTG	1 cut(s)	215
PsuI	RGATCY	1 cut(s)	268
PvuII	CAGCTG	1 cut(s)	236
RsaI	GTAC	3 cut(s)	184, 275, 940
RsaNI	GTAC	3 cut(s)	183, 274, 939
RseI	CAYNNNNRTG	1 cut(s)	384
SaqAI	TTAA	2 cut(s)	263, 707
SatI	GCNGC	6 cut(s)	396, 488, 540, 732, 1086, 1188
Sau3AI	GATC	5 cut(s)	250, 268, 280, 519, 1132
Sau96I	GGNCC	3 cut(s)	21, 863, 1304
ScaI	AGTACT	1 cut(s)	940
SchI	GAGTC	2 cut(s)	800, 1348
ScrFI	CCNGG	2 cut(s)	834, 1130
SduI	GDGCHC	1 cut(s)	1329
SexAI	ACCWGGT	1 cut(s)	832
SfaNI	GCATC	4 cut(s)	633, 781, 889, 1201
SfcI	CTRYAG	2 cut(s)	689, 1035
SfoI	GGCGCC	1 cut(s)	1142
SfuI	TTCGAA	1 cut(s)	1372
SinI	GGWCC	2 cut(s)	863, 1304
SmiMI	CAYNNNNRTG	1 cut(s)	384
SmlI	CTYRAG	1 cut(s)	1076
SmoI	CTYRAG	1 cut(s)	1076
SpeI	ACTAGT	2 cut(s)	508, 577
SphI	GCATGC	1 cut(s)	383
SseBI	AGGCCT	1 cut(s)	1178
SsiI	CCGC	1 cut(s)	866
SspDI	GGCGCC	1 cut(s)	1140
SspI	AATATT	1 cut(s)	546
SspMI	CTAG	4 cut(s)	155, 170, 509, 578
StuI	AGGCCT	1 cut(s)	1178
StyD4I	CCNGG	2 cut(s)	832, 1128
StyI	CCWWGG	3 cut(s)	186, 374, 1144
TaaI	ACNGT	3 cut(s)	445, 749, 1395
TaiI	ACGT	4 cut(s)	858, 1024, 1062, 1202
TaqI	TCGA	2 cut(s)	982, 1372
TatI	WGTACW	1 cut(s)	938
TfiI	GAWTC	2 cut(s)	114, 892
Tru1I	TTAA	2 cut(s)	263, 707
Tru9I	TTAA	2 cut(s)	263, 707
TscAI	CASTG	1 cut(s)	634
TseI	GCWGC	6 cut(s)	395, 487, 539, 731, 1085, 1187
TspGWI	ACGGA	1 cut(s)	261
TspRI	CASTG	1 cut(s)	634
VpaK11BI	GGWCC	2 cut(s)	863, 1304
XagI	CCTNNNNNAGG	1 cut(s)	1232
XapI	RAATTY	5 cut(s)	49, 591, 662, 1368, 1429
XbaI	TCTAGA	1 cut(s)	154
XceI	RCATGY	2 cut(s)	383, 563
XmiI	GTMKAC	2 cut(s)	435, 804
XmnI	GAANNNNTTC	1 cut(s)	142
XspI	CTAG	4 cut(s)	155, 170, 509, 578
ZrmI	AGTACT	1 cut(s)	940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.