Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001017

Physical Location & Seq

Genomic Coordinates Forward (+)

36780051 .. 36792045

Gene Structure 11995 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00357210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGGCCACTGCTTTCTTAACGTCCTCCTTCATTTTGGGCAGTTCCTCTGATTCTGGGCACGCCCTTCCATTCCTCTGTTCTAACAAGAAATTGAGAAGCAGACACAGAGCACGCTACCGAAACCCAGCTGGGTTTCATGCGTTTTGCCAATCAAAGGTGATTCTTGAACACCCTTTTGATAATTCAATACTCAACTTCCTCGCTAGATTATCCGGTCTGTTACCATGTCTGTATGACTGCTTGATTGCTTTAAACTATTCCACTTCCATTGAGGTGACAGAGGAAAAGCAGATACGGAGGAGGTATTCACCTTTCCTAGAAGGTGCTTCTGTGGAGACAAGCTATGTTACCAACACACTAGAATTTTCCGCTTCTGTGGATGGTACTGCAAGTTTGGTGCCTGATGATTGGCAAGCAGTTCCTGATATCTGGAGATCTTCGTCTGAGAAATATGGTGATCTTGTAGCATTGACAGATCCATACCATGACCCACCTTCTAGTTTAACTTATAAACAGCTTGAGAAGGAAATTTTAGATTTTTCTGAAGGTATAATGGCCACCGGAGCAATCAATGTGGTAAGAGGTTCAAGGTCATCAGTCGAAGAGTTACTACAAATATATCACCACTCAGATAGTGTTGCAATTGCTGTCGACAGTCCTGAACTGTTCAATCGGATTTCAGAAGAATTCTGTTCCAAGGCTGTCATGAAATTTGTTGTTCTTCTTTGGGGGGAGAAATCAAGCTTGGTCAGTAATGGGAAGATTCCCATTTTCAACTACAAAGAGATTCTAGATTTGGGACGAAAGAGTTGTAAGAGTATGGCCAATTCTGATGATGGACTTAAGTTTGGTTGTTACGACTCCTACATATCCTTCAAGCTTTTGAAAGTTGATGCAGCATCCGTTGTAACTATTCTGATTGCAGGAAAGTACTCTATGTATGAAGCAATCAACTCGGATGATATTGCTACAGTTGTATATACAAGCGGAACAAGTGGTAACCCAAAAGGTGTCATGCTCACTCATCGAAATCTGTTGCATCAGATTAAGAACCTTGGGGATATTGTACCTGCTGTAGGCGGGGACAAATTTCTCAGCATGCTTCCACCTTGGCATTGCTATGAGCGAGCTTCTGAATATTTTGCTTTTGCACGTGGAATTGAACAATTTTACACAACTGTCAGGAAATTGAAGGCTGATTTGCGACAATATCAACCAGATTTTGTAATTTCCGTTCCTTTAGTGTATGAGACACTGTACAGTGGGATTCATAAACAGATTTCTTCCAGCTCTACAGTTCTTAAGCTTATTACACTTACATTCATACAGATCAGTTTGGCATACATGGAGTTTAAGAGGATCTATGAGGGAACATATTTGACAAGGAAACAGAAGCAATCTTCACATCTTGTTTCAATAGCAGATTGGTTATGGGCAAGAGTTGTTGCTGCAGTATTATGGCCTTTGCATCTTCTCTATATTGTTACAACTATGTCTCAAGTGGCCGACATTATGGTGTTGCTTAGAATGAAAGGGACTGATAAGAGATTCCTGCAGGCTGGCATCAGTGGAGGAGGCAATCTACCTTCACATGTTGATAAGTTTTTTGAGGCAATTGGCATTAAATTGCTGAACGGATATGGTTTGACAGAGACTTCTCCCGTTGTTGCTGCTCGACACCCAGGCTGTAATGTTCTTGGTTCAGTTGGGCATCCGATTAGACATACTGAGTTCAAAGTTGTAGATCCTGAAACTGGTGAAGTTCTCCTACCTGGTTTAAGTGGCATTGTAAAAGTTAGGGGCCCACAAGTAATGAAAGGATACTACAAGAATCCAAGGGCTACAGAGCAAGTATTAGATGAGGATGGTTGGCTAAACACTGGAGATATAGGTTGGATTGCTCCTCATCATTCAATAGGGCGAAGTCGTCGTTGTGGAGGTGTTGTTGTTCTTGAAGGACGTGCAAAGGACACCATAGTGCTTTCAACAGGAGAAAACGTTGAACCAATAGAGCTTGAGGAAGCTGCCTCAAGAAGTAGTCTAATTCAACAAATTGTTGTCATTGGCCAGGATCAACGACGGCTTGGGGCAATAATTGTTCCAAACAAAGAAGAGGCTTTACTTGCAGCTAAGAATTTGTCCCTTGTAGATATTGATGCCTCTGACCTAAGCAAGGAGACAATGAAAAGCTTGTTGTCTCAAGATTTACAAAAATGGACTTCAAGTTGTTCATTTCAAATTGGACGGATCTTAATTGTAGATGAACCCTTTACGATTGATAATGGTTTGATGACTCTGACTATGAAAATTCGAAGGGATAGAGTCGTGGCTCGATACAAGGAACAGATAGACAATCTGTTCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0008922 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016053 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0030497 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

788

Amino Acids

87.62

Weight (kDa)

7.28

Isoelectric Point (pI)

40.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	183 - 609	8.5e-52	AMP-binding enzyme
AMP-binding_C_3	PF23562	657 - 787	2.6e-10	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23790 AT4G14070
fragaria_vesca	FvH4_4g13140 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151
malus_domestica	MD04G1018700.v1.1 MD04G1018900.v1.1
prunus_persica	Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G187500_v2.0.a1
pyrus_communis	pycom04g01500 pycom04g01510
rosa_chinensis	RchiOBHm_Chr4g0412911 RchiOBHm_Chr4g0413021 RchiOBHm_Chr4g0413231
rosa_laevigata	RLG00000008230 RLG00000008244 RLG00000008246
rosa_multiflora	Rmu_sc0000717.1_g000026 Rmu_sc0005849.1_g000011 Rmu_sc0021560.1_g000001
rosa_roxburghii	Rroxscaffold_5G00357150 Rroxscaffold_5G00357210
rosa_rugosa	Rorug04G0117500 Rorug04G0117600 Rorug04G0117700 Rorug04G0117800 Rorug04G0117900 Rorug04G0118000 Rorug04G0118000 Rorug04G0118100 Rorug04G0118100 Rorug04G0118600
rosa_samantha	Rh4AG176400 Rh4AG177100 Rh4AG178600 Rh4BG177000 Rh4BG177900 Rh4CG187400 Rh4CG188100 Rh4CG189200 Rh4DG173700 Rh4DG173900
rosa_wichuraiana	Rw4G014810 Rw4G014820 Rw4G014850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	510
Acc36I	ACCTGC	1 cut(s)	1078
AccB1I	GGYRCC	1 cut(s)	397
AccI	GTMKAC	1 cut(s)	651
AciI	CCGC	3 cut(s)	369, 987, 1080
AclI	AACGTT	1 cut(s)	1998
AclWI	GGATC	5 cut(s)	470, 1367, 1739, 2079, 2255
AcoI	YGGCCR	5 cut(s)	3, 555, 822, 1503, 2065
AcsI	RAATTY	7 cut(s)	362, 528, 686, 710, 1088, 2134, 2307
AcuI	CTGAAG	1 cut(s)	564
AcvI	CACGTG	1 cut(s)	1154
AfaI	GTAC	4 cut(s)	385, 932, 1068, 1259
AfiI	CCNNNNNNNGG	4 cut(s)	154, 1076, 1754, 2173
AflII	CTTAAG	2 cut(s)	842, 1301
AflIII	ACRYGT	1 cut(s)	1591
AjiI	CACGTC	1 cut(s)	1961
AjnI	CCWGG	3 cut(s)	1681, 1771, 2067
AjuI	GAANNNNNNNTTGG	2 cut(s)	728, 760
AleI	CACNNNNGTG	1 cut(s)	1976
Alw21I	GWGCWC	1 cut(s)	112
Alw26I	GTCTC	6 cut(s)	329, 1244, 1500, 1646, 2171, 2202
AlwI	GGATC	5 cut(s)	470, 1367, 1739, 2079, 2255
AlwNI	CAGNNNCTG	1 cut(s)	422
AoxI	GGCC	7 cut(s)	3, 555, 822, 1460, 1503, 1801, 2065
ApaI	GGGCCC	1 cut(s)	1805
ApeKI	GCWGC	5 cut(s)	896, 1448, 1670, 2024, 2126
ApoI	RAATTY	7 cut(s)	362, 528, 686, 710, 1088, 2134, 2307
AspS9I	GGNCC	2 cut(s)	1801, 1802
AsuHPI	GGTGA	6 cut(s)	169, 286, 300, 467, 614, 1769
AsuII	TTCGAA	1 cut(s)	2311
BaeGI	GKGCMC	2 cut(s)	60, 1805
BalI	TGGCCA	4 cut(s)	5, 557, 824, 2067
BanI	GGYRCC	1 cut(s)	397
BanII	GRGCYC	1 cut(s)	1805
BarI	GAAGNNNNNNTAC	6 cut(s)	594, 626, 1752, 1784, 2103, 2135
BbrPI	CACGTG	1 cut(s)	1154
Bbv12I	GWGCWC	1 cut(s)	112
BbvI	GCAGC	5 cut(s)	908, 1435, 1657, 2011, 2138
BccI	CCATC	3 cut(s)	374, 830, 1859
BceAI	ACGGC	1 cut(s)	2096
BcgI	CGANNNNNNTGC	2 cut(s)	936, 970
BciT130I	CCWGG	3 cut(s)	1683, 1773, 2069
BciVI	GTATCC	1 cut(s)	1814
BcoDI	GTCTC	6 cut(s)	329, 1244, 1500, 1646, 2171, 2202
BfaI	CTAG	5 cut(s)	204, 317, 359, 498, 791
BfmI	CTRYAG	6 cut(s)	969, 1074, 1293, 1449, 1553, 1842
BfrI	CTTAAG	2 cut(s)	842, 1301
BfuAI	ACCTGC	1 cut(s)	1078
BfuI	GTATCC	1 cut(s)	1814
BglII	AGATCT	1 cut(s)	434
BisI	GCNGC	5 cut(s)	897, 1449, 1671, 2025, 2127
BlsI	GCNGC	5 cut(s)	898, 1450, 1672, 2026, 2128
BmcAI	AGTACT	1 cut(s)	932
Bme1390I	CCNGG	3 cut(s)	1683, 1773, 2069
BmgBI	CACGTC	1 cut(s)	1961
BmgT120I	GGNCC	2 cut(s)	1801, 1802
BmiI	GGNNCC	3 cut(s)	399, 1802, 1803
BmrFI	CCNGG	3 cut(s)	1683, 1773, 2069
BmsI	GCATC	7 cut(s)	883, 908, 1048, 1477, 1572, 1720, 2146
BpmI	CTGGAG	2 cut(s)	451, 1902
Bpu10I	CCTNAGC	1 cut(s)	2168
Bpu14I	TTCGAA	1 cut(s)	2311
BpuEI	CTTGAG	5 cut(s)	539, 1482, 2014, 2036, 2184
BsaAI	YACGTR	1 cut(s)	1154
BsaJI	CCNNGG	5 cut(s)	696, 1054, 1109, 1681, 1835
BsaWI	WCCGGW	2 cut(s)	212, 560
BsaXI	ACNNNNNCTCC	4 cut(s)	1929, 1959, 1983, 2013
Bsc4I	CCNNNNNNNGG	4 cut(s)	154, 1076, 1754, 2173
Bse1I	ACTGG	2 cut(s)	1759, 1885
Bse3DI	GCAATG	1 cut(s)	1114
BseBI	CCWGG	3 cut(s)	1683, 1773, 2069
BseDI	CCNNGG	5 cut(s)	696, 1054, 1109, 1681, 1835
BseGI	GGATG	5 cut(s)	385, 899, 964, 1711, 1870
BseLI	CCNNNNNNNGG	4 cut(s)	154, 1076, 1754, 2173
BseMI	GCAATG	1 cut(s)	1114
BseMII	CTCAG	4 cut(s)	435, 642, 1108, 1719
BseNI	ACTGG	2 cut(s)	1759, 1885
BseRI	GAGGAG	3 cut(s)	313, 1587, 1893
BseSI	GKGCMC	2 cut(s)	60, 1805
BseXI	GCAGC	5 cut(s)	908, 1435, 1657, 2011, 2138
BseYI	CCCAGC	2 cut(s)	124, 128
BshFI	GGCC	7 cut(s)	5, 557, 824, 1462, 1505, 1803, 2067
BshNI	GGYRCC	1 cut(s)	397
BsiHKAI	GWGCWC	1 cut(s)	112
BsiSI	CCGG	2 cut(s)	213, 561
BslFI	GGGAC	4 cut(s)	813, 1097, 1549, 2125
BslI	CCNNNNNNNGG	4 cut(s)	154, 1076, 1754, 2173
BsmAI	GTCTC	6 cut(s)	329, 1244, 1500, 1646, 2171, 2202
BsmFI	GGGAC	4 cut(s)	813, 1097, 1549, 2125
BsnI	GGCC	7 cut(s)	5, 557, 824, 1462, 1505, 1803, 2067
Bsp119I	TTCGAA	1 cut(s)	2311
Bsp120I	GGGCCC	1 cut(s)	1801
Bsp1286I	GDGCHC	3 cut(s)	60, 112, 1805
Bsp1407I	TGTACA	1 cut(s)	1257
Bsp143I	GATC	8 cut(s)	434, 457, 475, 1329, 1359, 1744, 2071, 2247
BspACI	CCGC	3 cut(s)	369, 987, 1080
BspANI	GGCC	7 cut(s)	5, 557, 824, 1462, 1505, 1803, 2067
BspCNI	CTCAG	4 cut(s)	436, 641, 1107, 1720
BspHI	TCATGA	1 cut(s)	705
BspLI	GGNNCC	3 cut(s)	399, 1802, 1803
BspMAI	CTGCAG	2 cut(s)	1453, 1557
BspMI	ACCTGC	1 cut(s)	1078
BspPI	GGATC	5 cut(s)	470, 1367, 1739, 2079, 2255
BspT104I	TTCGAA	1 cut(s)	2311
BspT107I	GGYRCC	1 cut(s)	397
BspTI	CTTAAG	2 cut(s)	842, 1301
BsrDI	GCAATG	1 cut(s)	1114
BsrGI	TGTACA	1 cut(s)	1257
BsrI	ACTGG	2 cut(s)	1759, 1885
BssECI	CCNNGG	5 cut(s)	696, 1054, 1109, 1681, 1835
BssMI	GATC	8 cut(s)	434, 457, 475, 1329, 1359, 1744, 2071, 2247
BssT1I	CCWWGG	4 cut(s)	696, 1054, 1109, 1835
Bst2UI	CCWGG	3 cut(s)	1683, 1773, 2069
Bst4CI	ACNGT	7 cut(s)	656, 666, 973, 1180, 1257, 1262, 1297
Bst6I	CTCTTC	2 cut(s)	597, 2106
BstAFI	CTTAAG	2 cut(s)	842, 1301
BstAUI	TGTACA	1 cut(s)	1257
BstBAI	YACGTR	1 cut(s)	1154
BstBI	TTCGAA	1 cut(s)	2311
BstC8I	GCNNGC	7 cut(s)	60, 112, 414, 1100, 1128, 1557, 1561
BstDEI	CTNAG	7 cut(s)	444, 628, 1094, 1523, 1728, 2130, 2168
BstEII	GGTNACC	1 cut(s)	998
BstENI	CCTNNNNNAGG	2 cut(s)	1074, 2171
BstF5I	GGATG	5 cut(s)	385, 899, 964, 1711, 1870
BstKTI	GATC	8 cut(s)	437, 460, 478, 1332, 1362, 1747, 2074, 2250
BstMAI	GTCTC	6 cut(s)	329, 1244, 1500, 1646, 2171, 2202
BstMBI	GATC	8 cut(s)	434, 457, 475, 1329, 1359, 1744, 2071, 2247
BstMWI	GCNNNNNNNGC	2 cut(s)	563, 2123
BstNI	CCWGG	3 cut(s)	1683, 1773, 2069
BstNSI	RCATGY	2 cut(s)	1102, 1595
BstPI	GGTNACC	1 cut(s)	998
BstSCI	CCNGG	3 cut(s)	1681, 1771, 2067
BstSFI	CTRYAG	6 cut(s)	969, 1074, 1293, 1449, 1553, 1842
BstSLI	GKGCMC	2 cut(s)	60, 1805
BstV1I	GCAGC	5 cut(s)	908, 1435, 1657, 2011, 2138
BstX2I	RGATCY	5 cut(s)	434, 475, 1359, 1744, 2247
BstYI	RGATCY	5 cut(s)	434, 475, 1359, 1744, 2247
BsuI	GTATCC	1 cut(s)	1814
BsuRI	GGCC	7 cut(s)	5, 557, 824, 1462, 1505, 1803, 2067
BtrI	CACGTC	1 cut(s)	1961
BtsCI	GGATG	5 cut(s)	385, 899, 964, 1711, 1870
BtsI	GCAGTG	1 cut(s)	6
BtsIMutI	CAGTG	5 cut(s)	6, 1253, 1267, 1573, 1878
BveI	ACCTGC	1 cut(s)	1078
Cac8I	GCNNGC	7 cut(s)	60, 112, 414, 1100, 1128, 1557, 1561
CaiI	CAGNNNCTG	1 cut(s)	422
CciI	TCATGA	1 cut(s)	705
Cfr13I	GGNCC	2 cut(s)	1801, 1802
CsiI	ACCWGGT	1 cut(s)	1771
Csp6I	GTAC	4 cut(s)	384, 931, 1067, 1258
CspCI	CAANNNNNGTGG	4 cut(s)	250, 285, 555, 590
CviAII	CATG	8 cut(s)	137, 225, 485, 706, 1015, 1099, 1345, 1592
CviQI	GTAC	4 cut(s)	384, 931, 1067, 1258
DdeI	CTNAG	7 cut(s)	444, 628, 1094, 1523, 1728, 2130, 2168
DpnI	GATC	8 cut(s)	436, 459, 477, 1331, 1361, 1746, 2073, 2249
DpnII	GATC	8 cut(s)	434, 457, 475, 1329, 1359, 1744, 2071, 2247
DraI	TTTAAA	1 cut(s)	252
EaeI	YGGCCR	5 cut(s)	3, 555, 822, 1503, 2065
Eam1104I	CTCTTC	2 cut(s)	597, 2106
EarI	CTCTTC	2 cut(s)	597, 2106
Eco130I	CCWWGG	4 cut(s)	696, 1054, 1109, 1835
Eco24I	GRGCYC	1 cut(s)	1805
Eco32I	GATATC	1 cut(s)	427
Eco57I	CTGAAG	1 cut(s)	564
Eco72I	CACGTG	1 cut(s)	1154
Eco91I	GGTNACC	1 cut(s)	998
EcoNI	CCTNNNNNAGG	2 cut(s)	1074, 2171
EcoO109I	RGGNCCY	1 cut(s)	1801
EcoO65I	GGTNACC	1 cut(s)	998
EcoRI	GAATTC	1 cut(s)	686
EcoRII	CCWGG	3 cut(s)	1681, 1771, 2067
EcoRV	GATATC	1 cut(s)	427
EcoT14I	CCWWGG	4 cut(s)	696, 1054, 1109, 1835
EcoT38I	GRGCYC	1 cut(s)	1805
ErhI	CCWWGG	4 cut(s)	696, 1054, 1109, 1835
FaeI	CATG	8 cut(s)	140, 228, 488, 709, 1018, 1102, 1348, 1595
FaqI	GGGAC	4 cut(s)	813, 1097, 1549, 2125
FatI	CATG	8 cut(s)	136, 224, 484, 705, 1014, 1098, 1344, 1591
FauI	CCCGC	1 cut(s)	1073
FblI	GTMKAC	1 cut(s)	651
Fnu4HI	GCNGC	5 cut(s)	897, 1449, 1671, 2025, 2127
FokI	GGATG	5 cut(s)	392, 886, 971, 1698, 1877
FriOI	GRGCYC	1 cut(s)	1805
Fsp4HI	GCNGC	5 cut(s)	897, 1449, 1671, 2025, 2127
FspBI	CTAG	5 cut(s)	204, 317, 359, 498, 791
GluI	GCNGC	5 cut(s)	897, 1449, 1671, 2025, 2127
GsaI	CCCAGC	2 cut(s)	128, 132
GsuI	CTGGAG	2 cut(s)	451, 1902
HaeIII	GGCC	7 cut(s)	5, 557, 824, 1462, 1505, 1803, 2067
HapII	CCGG	2 cut(s)	213, 561
Hin1II	CATG	8 cut(s)	140, 228, 488, 709, 1018, 1102, 1348, 1595
HincII	GTYRAC	1 cut(s)	652
HindII	GTYRAC	1 cut(s)	652
HindIII	AAGCTT	4 cut(s)	742, 878, 1304, 2188
HpaII	CCGG	2 cut(s)	213, 561
HphI	GGTGA	6 cut(s)	169, 286, 300, 467, 614, 1769
Hpy166II	GTNNAC	1 cut(s)	652
Hpy8I	GTNNAC	1 cut(s)	652
Hpy99I	CGWCG	2 cut(s)	1932, 2082
HpyCH4III	ACNGT	7 cut(s)	656, 666, 973, 1180, 1257, 1262, 1297
HpyCH4IV	ACGT	4 cut(s)	20, 1153, 1960, 1998
HpyF10VI	GCNNNNNNNGC	2 cut(s)	563, 2123
HpyF3I	CTNAG	7 cut(s)	444, 628, 1094, 1523, 1728, 2130, 2168
HpySE526I	ACGT	4 cut(s)	20, 1153, 1960, 1998
Hsp92II	CATG	8 cut(s)	140, 228, 488, 709, 1018, 1102, 1348, 1595
Kzo9I	GATC	8 cut(s)	434, 457, 475, 1329, 1359, 1744, 2071, 2247
LmnI	GCTCC	2 cut(s)	563, 1906
Lsp1109I	GCAGC	5 cut(s)	908, 1435, 1657, 2011, 2138
LweI	GCATC	7 cut(s)	883, 908, 1048, 1477, 1572, 1720, 2146
MabI	ACCWGGT	1 cut(s)	1771
MaeI	CTAG	5 cut(s)	204, 317, 359, 498, 791
MaeII	ACGT	4 cut(s)	20, 1153, 1960, 1998
MaeIII	GTNAC	8 cut(s)	219, 274, 346, 606, 854, 907, 998, 1483
MalI	GATC	8 cut(s)	436, 459, 477, 1331, 1361, 1746, 2073, 2249
MboI	GATC	8 cut(s)	434, 457, 475, 1329, 1359, 1744, 2071, 2247
MboII	GAAGA	9 cut(s)	429, 614, 695, 713, 772, 1275, 1392, 1463, 2123
MfeI	CAATTG	2 cut(s)	642, 1614
MflI	RGATCY	5 cut(s)	434, 475, 1359, 1744, 2247
MhlI	GDGCHC	3 cut(s)	60, 112, 1805
MlsI	TGGCCA	4 cut(s)	5, 557, 824, 2067
MluNI	TGGCCA	4 cut(s)	5, 557, 824, 2067
MlyI	GAGTC	3 cut(s)	854, 2287, 2331
MmeI	TCCRAC	1 cut(s)	1874
Mox20I	TGGCCA	4 cut(s)	5, 557, 824, 2067
MscI	TGGCCA	4 cut(s)	5, 557, 824, 2067
MslI	CAYNNNNRTG	4 cut(s)	272, 1119, 1514, 1976
Msp20I	TGGCCA	4 cut(s)	5, 557, 824, 2067
MspA1I	CMGCKG	1 cut(s)	128
MspCI	CTTAAG	2 cut(s)	842, 1301
MspI	CCGG	2 cut(s)	213, 561
MspR9I	CCNGG	3 cut(s)	1683, 1773, 2069
MunI	CAATTG	2 cut(s)	642, 1614
MvaI	CCWGG	3 cut(s)	1683, 1773, 2069
MwoI	GCNNNNNNNGC	2 cut(s)	563, 2123
NdeII	GATC	8 cut(s)	434, 457, 475, 1329, 1359, 1744, 2071, 2247
NlaIII	CATG	8 cut(s)	140, 228, 488, 709, 1018, 1102, 1348, 1595
NlaIV	GGNNCC	3 cut(s)	399, 1802, 1803
NmuCI	GTSAC	1 cut(s)	274
NspI	RCATGY	2 cut(s)	1102, 1595
NspV	TTCGAA	1 cut(s)	2311
OliI	CACNNNNGTG	1 cut(s)	1976
PaeI	GCATGC	1 cut(s)	1102
PagI	TCATGA	1 cut(s)	705
PciI	ACATGT	1 cut(s)	1591
PfeI	GAWTC	7 cut(s)	50, 160, 763, 787, 1267, 1548, 1831
PkrI	GCNGC	5 cut(s)	898, 1450, 1672, 2026, 2128
PleI	GAGTC	3 cut(s)	854, 2287, 2330
PmaCI	CACGTG	1 cut(s)	1154
PmlI	CACGTG	1 cut(s)	1154
PpsI	GAGTC	3 cut(s)	854, 2287, 2330
Ppu21I	YACGTR	1 cut(s)	1154
PscI	ACATGT	1 cut(s)	1591
PsiI	TTATAA	1 cut(s)	510
Psp1406I	AACGTT	1 cut(s)	1998
Psp6I	CCWGG	3 cut(s)	1681, 1771, 2067
PspCI	CACGTG	1 cut(s)	1154
PspEI	GGTNACC	1 cut(s)	998
PspFI	CCCAGC	2 cut(s)	124, 128
PspGI	CCWGG	3 cut(s)	1681, 1771, 2067
PspN4I	GGNNCC	3 cut(s)	399, 1802, 1803
PspOMI	GGGCCC	1 cut(s)	1801
PspPI	GGNCC	2 cut(s)	1801, 1802
PsrI	GAACNNNNNNTAC	2 cut(s)	1218, 1250
PstI	CTGCAG	2 cut(s)	1453, 1557
PstNI	CAGNNNCTG	1 cut(s)	422
PsuI	RGATCY	5 cut(s)	434, 475, 1359, 1744, 2247
PvuII	CAGCTG	1 cut(s)	128
RsaI	GTAC	4 cut(s)	385, 932, 1068, 1259
RsaNI	GTAC	4 cut(s)	384, 931, 1067, 1258
RseI	CAYNNNNRTG	4 cut(s)	272, 1119, 1514, 1976
SalI	GTCGAC	1 cut(s)	650
SatI	GCNGC	5 cut(s)	897, 1449, 1671, 2025, 2127
Sau3AI	GATC	8 cut(s)	434, 457, 475, 1329, 1359, 1744, 2071, 2247
Sau96I	GGNCC	2 cut(s)	1801, 1802
SbfI	CCTGCAGG	1 cut(s)	1557
ScaI	AGTACT	1 cut(s)	932
SchI	GAGTC	3 cut(s)	854, 2287, 2331
ScrFI	CCNGG	3 cut(s)	1683, 1773, 2069
SdaI	CCTGCAGG	1 cut(s)	1557
SduI	GDGCHC	3 cut(s)	60, 112, 1805
SexAI	ACCWGGT	1 cut(s)	1771
SfaNI	GCATC	7 cut(s)	883, 908, 1048, 1477, 1572, 1720, 2146
SfcI	CTRYAG	6 cut(s)	969, 1074, 1293, 1449, 1553, 1842
SfuI	TTCGAA	1 cut(s)	2311
SmiMI	CAYNNNNRTG	4 cut(s)	272, 1119, 1514, 1976
SmlI	CTYRAG	7 cut(s)	518, 842, 1301, 1497, 2015, 2029, 2199
SmoI	CTYRAG	7 cut(s)	518, 842, 1301, 1497, 2015, 2029, 2199
SphI	GCATGC	1 cut(s)	1102
Sse8387I	CCTGCAGG	1 cut(s)	1557
SsiI	CCGC	3 cut(s)	369, 987, 1080
SspI	AATATT	1 cut(s)	1139
SspMI	CTAG	5 cut(s)	204, 317, 359, 498, 791
StyD4I	CCNGG	3 cut(s)	1681, 1771, 2067
StyI	CCWWGG	4 cut(s)	696, 1054, 1109, 1835
TaaI	ACNGT	7 cut(s)	656, 666, 973, 1180, 1257, 1262, 1297
TaiI	ACGT	4 cut(s)	23, 1156, 1963, 2001
TaqI	TCGA	6 cut(s)	600, 651, 1027, 1675, 2311, 2332
TatI	WGTACW	2 cut(s)	930, 1257
TfiI	GAWTC	7 cut(s)	50, 160, 763, 787, 1267, 1548, 1831
TscAI	CASTG	5 cut(s)	13, 1260, 1267, 1573, 1885
TseFI	GTSAC	1 cut(s)	274
TseI	GCWGC	5 cut(s)	896, 1448, 1670, 2024, 2126
Tsp45I	GTSAC	1 cut(s)	274
TspGWI	ACGGA	5 cut(s)	310, 892, 1222, 1650, 2260
TspRI	CASTG	5 cut(s)	13, 1260, 1267, 1573, 1885
Vha464I	CTTAAG	2 cut(s)	842, 1301
XagI	CCTNNNNNAGG	2 cut(s)	1074, 2171
XapI	RAATTY	7 cut(s)	362, 528, 686, 710, 1088, 2134, 2307
XbaI	TCTAGA	1 cut(s)	790
XceI	RCATGY	2 cut(s)	1102, 1595
XmiI	GTMKAC	1 cut(s)	651
XspI	CTAG	5 cut(s)	204, 317, 359, 498, 791
ZrmI	AGTACT	1 cut(s)	932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.