Rorug04G0117800

acyl-activating enzyme 16

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
18637651 .. 18642046
4396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0117800.1

Sequence Viewer

Length: 1395 bp
ATGAGATTCCCACACTTAGACATATTTGGACTAACATTGACTTCAGCTAGCCCTAACACTATTCGACCAAACCTCCATTTTCTCCTTCGTTCTCCTCCTCCGACAAAAACTGACCTCGCATTCTTCGTTCTCCGCCTCCGACCACAACCCTCCTCCTCATCTCCGTTCTCCGGCTACAATCACAACCCGACCCTCCTCCTTTTCCGCCTCGGACCAGCTCCTCTGCTCGAAGACGGTGAAGAGAATCAACCTCTTCGTTCTCCACCTCCGACCACAACCCTCCTCCTCGTCTTCATTCTCCGGCTACAATCACAACCCGACCCGCCTCGTCCTCCTCCTTTTCCGCCTCGGACCAGCTCCTCTTCTCGAAGACGGATTTGTGTTTCATCTACCGAAGCTTTGTGGGCTGCATTAGAGCTTTCTGGGCATTCATGTTCTGAGCTTTCTGGGCATTCTCCATATCTGAGGAGGCTTCGAACTGTGTTATCTAGTCATGAAGGTTTCTGTAGCCAGGGCTTTGATGTTACTGTACTTGAAAATGATAGTCTTGATGATGTGGGTATCCATGGTTATTGGTATCCCTACAGGAATATATTCAGCCTTGTTGATGAGCTAGAGATTAAACCCTTCACTAACTGGACTAAGTTTGCGCAATATTCAGCTGAGGGATTGGAGGTTGAATTTCCGGTATTTCGAGACCTTCCTCAGTTGCCAACTCCATTAGGAACCTTGTACTATTCACAGTTTGTTCAGTTTCCGTTGGTTGATAGATTAACTTCACTTCCTTTAACGGCTGCAGTAATCGACTTTGACAATACTGATACTGCCTGGAGAAAATATGACTCAATTATTTCAAGGGAGCTCTTTACGCAGTTTGGCTGCTCACAAAAGCTTTATCAGAAAGTCCTAGCACCATTGCTTCAAGTGGGTCTGTTTGCACCAGCAGAACAATGTAGTGATGCTGCTACTCTGGGCTTGCTATCCTACATCCTTGCTTACCAGAAAGATTTTGATCTAGTGTTGTGTCGTGGAACAACTAGGGAAAAGATCTTTAAGCCGTGGATGGAGTCTATGACAACCAAAGGTTGCAAGTTTGAGAAAGGTCTAAGTGTAACAGACCTTTTGTTTAATGAGGAAACTGGCTGTATTTCTGAAGTAGTTTGTGGCAAAGAAATGTATAGTGCTGACGCAGTTGTCCTAGCTGTTGGAATCTCCACGCTTCATAAACTTAATGAAAATAGTGCAGTGTTGTGTACGAGGGAGGAATTTGTCAAGGTCTCGAACCTGGCTACCATCGATGTACTCTCCATTAAGCTCTGGGTCGATAGGAAGGTGAAAACAGAAGAACAAATGGGATATAAGTATGGCGAGGCTTGCTTTCGTTTATATTTCTAG

Protein Analysis

464

Amino Acids

52.34

Weight (kDa)

5.97

Isoelectric Point (pI)

48.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1193
Acc16I TGCGCA 1 cut(s) 651
AciI CCGC 4 cut(s) 133, 205, 323, 344
AcsI RAATTY 2 cut(s) 680, 1265
AcuI CTGAAG 2 cut(s) 27, 1173
AfaI GTAC 4 cut(s) 531, 734, 1255, 1302
AfiI CCNNNNNNNGG 1 cut(s) 170
AgsI TTSAA 4 cut(s) 536, 680, 855, 923
AjnI CCWGG 3 cut(s) 510, 827, 1284
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 2 cut(s) 690, 1282
ApeKI GCWGC 4 cut(s) 407, 794, 879, 962
ApoI RAATTY 2 cut(s) 680, 1265
Asp700I GAANNNNTTC 1 cut(s) 593
AspLEI GCGC 1 cut(s) 652
AspS9I GGNCC 2 cut(s) 212, 351
AsuHPI GGTGA 2 cut(s) 248, 1345
AsuII TTCGAA 1 cut(s) 475
AsuNHI GCTAGC 1 cut(s) 47
AvaII GGWCC 2 cut(s) 212, 351
BanII GRGCYC 1 cut(s) 864
BbsI GAAGAC 3 cut(s) 237, 283, 376
Bbv12I GWGCWC 1 cut(s) 864
BbvCI CCTCAGC 1 cut(s) 663
BbvI GCAGC 4 cut(s) 394, 781, 866, 949
BccI CCATC 2 cut(s) 1057, 1301
BceAI ACGGC 2 cut(s) 807, 1042
BciT130I CCWGG 3 cut(s) 512, 829, 1286
BciVI GTATCC 2 cut(s) 572, 588
BcoDI GTCTC 2 cut(s) 690, 1282
BfaI CTAG 8 cut(s) 48, 489, 614, 908, 1016, 1038, 1199, 1393
BfmI CTRYAG 3 cut(s) 505, 583, 795
BfuI GTATCC 2 cut(s) 572, 588
BglII AGATCT 1 cut(s) 1047
BisI GCNGC 4 cut(s) 408, 795, 880, 963
BlsI GCNGC 4 cut(s) 409, 796, 881, 964
Bme1390I CCNGG 3 cut(s) 512, 829, 1286
Bme18I GGWCC 2 cut(s) 212, 351
BmgT120I GGNCC 2 cut(s) 212, 351
BmiI GGNNCC 1 cut(s) 727
BmrFI CCNGG 3 cut(s) 512, 829, 1286
BmsI GCATC 1 cut(s) 949
BmtI GCTAGC 1 cut(s) 51
BpiI GAAGAC 3 cut(s) 237, 283, 376
BpmI CTGGAG 1 cut(s) 850
Bpu10I CCTNAGC 1 cut(s) 663
Bpu14I TTCGAA 1 cut(s) 475
Bsa29I ATCGAT 1 cut(s) 1296
BsaBI GATNNNNATC 1 cut(s) 1011
BsaI GGTCTC 2 cut(s) 690, 1282
BsaJI CCNNGG 5 cut(s) 208, 347, 511, 565, 1058
BsaWI WCCGGW 1 cut(s) 685
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 1 cut(s) 170
Bse1I ACTGG 2 cut(s) 641, 1144
Bse3DI GCAATG 1 cut(s) 914
Bse8I GATNNNNATC 1 cut(s) 1011
BseBI CCWGG 3 cut(s) 512, 829, 1286
BseCI ATCGAT 1 cut(s) 1296
BseDI CCNNGG 5 cut(s) 208, 347, 511, 565, 1058
BseGI GGATG 2 cut(s) 987, 1068
BseJI GATNNNNATC 1 cut(s) 1011
BseLI CCNNNNNNNGG 1 cut(s) 170
BseMI GCAATG 1 cut(s) 914
BseMII CTCAG 4 cut(s) 429, 455, 654, 719
BseNI ACTGG 2 cut(s) 641, 1144
BseXI GCAGC 4 cut(s) 394, 781, 866, 949
BsgI GTGCAG 1 cut(s) 1263
BshVI ATCGAT 1 cut(s) 1296
BsiHKAI GWGCWC 1 cut(s) 864
BsiSI CCGG 3 cut(s) 171, 301, 686
BslI CCNNNNNNNGG 1 cut(s) 170
BsmAI GTCTC 2 cut(s) 690, 1282
BsmI GAATGC 3 cut(s) 119, 427, 451
Bso31I GGTCTC 2 cut(s) 690, 1282
Bsp119I TTCGAA 1 cut(s) 475
Bsp1286I GDGCHC 1 cut(s) 864
Bsp143I GATC 2 cut(s) 1012, 1047
Bsp19I CCATGG 1 cut(s) 565
BspACI CCGC 4 cut(s) 133, 205, 323, 344
BspCNI CTCAG 4 cut(s) 430, 456, 655, 718
BspDI ATCGAT 1 cut(s) 1296
BspHI TCATGA 1 cut(s) 493
BspLI GGNNCC 1 cut(s) 727
BspMAI CTGCAG 1 cut(s) 799
BspOI GCTAGC 1 cut(s) 51
BspT104I TTCGAA 1 cut(s) 475
BspTNI GGTCTC 2 cut(s) 690, 1282
BsrDI GCAATG 1 cut(s) 914
BsrI ACTGG 2 cut(s) 641, 1144
BssECI CCNNGG 5 cut(s) 208, 347, 511, 565, 1058
BssMI GATC 2 cut(s) 1012, 1047
BssT1I CCWWGG 1 cut(s) 565
Bst2UI CCWGG 3 cut(s) 512, 829, 1286
Bst4CI ACNGT 4 cut(s) 236, 481, 529, 744
Bst6I CTCTTC 3 cut(s) 234, 258, 367
BstBI TTCGAA 1 cut(s) 475
BstC8I GCNNGC 3 cut(s) 49, 977, 1375
BstDEI CTNAG 7 cut(s) 16, 438, 464, 642, 663, 705, 1106
BstDSI CCRYGG 2 cut(s) 565, 1058
BstF5I GGATG 2 cut(s) 987, 1068
BstHHI GCGC 1 cut(s) 652
BstKTI GATC 2 cut(s) 1015, 1050
BstMAI GTCTC 2 cut(s) 690, 1282
BstMBI GATC 2 cut(s) 1012, 1047
BstMWI GCNNNNNNNGC 5 cut(s) 404, 424, 448, 868, 1374
BstNI CCWGG 3 cut(s) 512, 829, 1286
BstSCI CCNGG 3 cut(s) 510, 827, 1284
BstSFI CTRYAG 3 cut(s) 505, 583, 795
BstV1I GCAGC 4 cut(s) 394, 781, 866, 949
BstV2I GAAGAC 3 cut(s) 237, 283, 376
BstX2I RGATCY 1 cut(s) 1047
BstYI RGATCY 1 cut(s) 1047
Bsu15I ATCGAT 1 cut(s) 1296
BsuI GTATCC 2 cut(s) 572, 588
BsuTUI ATCGAT 1 cut(s) 1296
BtgI CCRYGG 2 cut(s) 565, 1058
BtsCI GGATG 2 cut(s) 987, 1068
BtsI GCAGTG 1 cut(s) 1251
BtsIMutI CAGTG 1 cut(s) 1251
Cac8I GCNNGC 3 cut(s) 49, 977, 1375
CciI TCATGA 1 cut(s) 493
CfoI GCGC 1 cut(s) 652
Cfr13I GGNCC 2 cut(s) 212, 351
ClaI ATCGAT 1 cut(s) 1296
CseI GACGC 1 cut(s) 1196
Csp6I GTAC 4 cut(s) 530, 733, 1254, 1301
CviAII CATG 3 cut(s) 432, 494, 566
CviQI GTAC 4 cut(s) 530, 733, 1254, 1301
DdeI CTNAG 7 cut(s) 16, 438, 464, 642, 663, 705, 1106
DpnI GATC 2 cut(s) 1014, 1049
DpnII GATC 2 cut(s) 1012, 1047
DrdI GACNNNNNNGTC 1 cut(s) 1193
DseDI GACNNNNNNGTC 1 cut(s) 1193
Eam1104I CTCTTC 3 cut(s) 234, 258, 367
EarI CTCTTC 3 cut(s) 234, 258, 367
EciI GGCGGA 3 cut(s) 122, 194, 333
Ecl136II GAGCTC 1 cut(s) 862
Eco130I CCWWGG 1 cut(s) 565
Eco24I GRGCYC 1 cut(s) 864
Eco31I GGTCTC 2 cut(s) 690, 1282
Eco47I GGWCC 2 cut(s) 212, 351
Eco53kI GAGCTC 1 cut(s) 862
Eco57I CTGAAG 2 cut(s) 27, 1173
EcoICRI GAGCTC 1 cut(s) 862
EcoRII CCWGG 3 cut(s) 510, 827, 1284
EcoT14I CCWWGG 1 cut(s) 565
EcoT38I GRGCYC 1 cut(s) 864
ErhI CCWWGG 1 cut(s) 565
FaeI CATG 3 cut(s) 435, 497, 569
FatI CATG 3 cut(s) 431, 493, 565
FauI CCCGC 1 cut(s) 330
Fnu4HI GCNGC 4 cut(s) 408, 795, 880, 963
FokI GGATG 2 cut(s) 974, 1075
FriOI GRGCYC 1 cut(s) 864
Fsp4HI GCNGC 4 cut(s) 408, 795, 880, 963
FspBI CTAG 8 cut(s) 48, 489, 614, 908, 1016, 1038, 1199, 1393
FspI TGCGCA 1 cut(s) 651
GlaI GCGC 1 cut(s) 651
GluI GCNGC 4 cut(s) 408, 795, 880, 963
GsuI CTGGAG 1 cut(s) 850
HapII CCGG 3 cut(s) 171, 301, 686
HgaI GACGC 1 cut(s) 1196
HhaI GCGC 1 cut(s) 652
Hin1II CATG 3 cut(s) 435, 497, 569
Hin6I GCGC 1 cut(s) 650
HinP1I GCGC 1 cut(s) 650
HindIII AAGCTT 2 cut(s) 396, 890
HinfI GANTC 5 cut(s) 6, 244, 842, 1067, 1209
HpaII CCGG 3 cut(s) 171, 301, 686
HphI GGTGA 2 cut(s) 248, 1345
Hpy166II GTNNAC 1 cut(s) 1254
Hpy188I TCNGA 9 cut(s) 102, 140, 212, 270, 351, 439, 465, 900, 1153
Hpy188III TCNNGA 5 cut(s) 366, 494, 548, 695, 1279
Hpy8I GTNNAC 1 cut(s) 1254
HpyAV CCTTC 5 cut(s) 95, 491, 637, 710, 1324
HpyCH4III ACNGT 4 cut(s) 236, 481, 529, 744
HpyCH4V TGCA 5 cut(s) 410, 797, 938, 1089, 1244
HpyF10VI GCNNNNNNNGC 5 cut(s) 404, 424, 448, 868, 1374
HpyF3I CTNAG 7 cut(s) 16, 438, 464, 642, 663, 705, 1106
Hsp92II CATG 3 cut(s) 435, 497, 569
HspAI GCGC 1 cut(s) 650
Kzo9I GATC 2 cut(s) 1012, 1047
LmnI GCTCC 3 cut(s) 223, 362, 859
Lsp1109I GCAGC 4 cut(s) 394, 781, 866, 949
LweI GCATC 1 cut(s) 949
MaeI CTAG 8 cut(s) 48, 489, 614, 908, 1016, 1038, 1199, 1393
MaeIII GTNAC 2 cut(s) 523, 1111
MalI GATC 2 cut(s) 1014, 1049
MboI GATC 2 cut(s) 1012, 1047
MboII GAAGA 8 cut(s) 115, 242, 245, 251, 283, 354, 381, 1355
MflI RGATCY 1 cut(s) 1047
MhlI GDGCHC 1 cut(s) 864
MluCI AATT 3 cut(s) 680, 846, 1265
MlyI GAGTC 2 cut(s) 836, 1076
MmeI TCCRAC 4 cut(s) 125, 163, 293, 1186
MroXI GAANNNNTTC 1 cut(s) 593
MseI TTAA 7 cut(s) 621, 773, 788, 1053, 1128, 1230, 1311
MspA1I CMGCKG 1 cut(s) 662
MspI CCGG 3 cut(s) 171, 301, 686
MspR9I CCNGG 3 cut(s) 512, 829, 1286
Mva1269I GAATGC 3 cut(s) 119, 427, 451
MvaI CCWGG 3 cut(s) 512, 829, 1286
MwoI GCNNNNNNNGC 5 cut(s) 404, 424, 448, 868, 1374
NcoI CCATGG 1 cut(s) 565
NdeII GATC 2 cut(s) 1012, 1047
NheI GCTAGC 1 cut(s) 47
NlaIII CATG 3 cut(s) 435, 497, 569
NlaIV GGNNCC 1 cut(s) 727
NsbI TGCGCA 1 cut(s) 651
NspV TTCGAA 1 cut(s) 475
PagI TCATGA 1 cut(s) 493
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PctI GAATGC 3 cut(s) 119, 427, 451
PdmI GAANNNNTTC 1 cut(s) 593
PfeI GAWTC 3 cut(s) 6, 244, 1209
PkrI GCNGC 4 cut(s) 409, 796, 881, 964
PleI GAGTC 2 cut(s) 836, 1075
PpsI GAGTC 2 cut(s) 836, 1075
Psp124BI GAGCTC 1 cut(s) 864
Psp6I CCWGG 3 cut(s) 510, 827, 1284
PspGI CCWGG 3 cut(s) 510, 827, 1284
PspN4I GGNNCC 1 cut(s) 727
PspPI GGNCC 2 cut(s) 212, 351
PstI CTGCAG 1 cut(s) 799
PsuI RGATCY 1 cut(s) 1047
PvuII CAGCTG 1 cut(s) 662
RsaI GTAC 4 cut(s) 531, 734, 1255, 1302
RsaNI GTAC 4 cut(s) 530, 733, 1254, 1301
SacI GAGCTC 1 cut(s) 864
SaqAI TTAA 7 cut(s) 621, 773, 788, 1053, 1128, 1230, 1311
SatI GCNGC 4 cut(s) 408, 795, 880, 963
Sau3AI GATC 2 cut(s) 1012, 1047
Sau96I GGNCC 2 cut(s) 212, 351
SchI GAGTC 2 cut(s) 836, 1076
ScrFI CCNGG 3 cut(s) 512, 829, 1286
SduI GDGCHC 1 cut(s) 864
SfaNI GCATC 1 cut(s) 949
SfcI CTRYAG 3 cut(s) 505, 583, 795
SfuI TTCGAA 1 cut(s) 475
SinI GGWCC 2 cut(s) 212, 351
Sse9I AATT 3 cut(s) 680, 846, 1265
SsiI CCGC 4 cut(s) 133, 205, 323, 344
SspI AATATT 1 cut(s) 656
SspMI CTAG 8 cut(s) 48, 489, 614, 908, 1016, 1038, 1199, 1393
SstI GAGCTC 1 cut(s) 864
StyD4I CCNGG 3 cut(s) 510, 827, 1284
StyI CCWWGG 1 cut(s) 565
TaaI ACNGT 4 cut(s) 236, 481, 529, 744
TaqI TCGA 9 cut(s) 64, 228, 367, 475, 694, 804, 1280, 1296, 1323
TasI AATT 3 cut(s) 680, 846, 1265
TatI WGTACW 3 cut(s) 529, 732, 1300
TfiI GAWTC 3 cut(s) 6, 244, 1209
Tru1I TTAA 7 cut(s) 621, 773, 788, 1053, 1128, 1230, 1311
Tru9I TTAA 7 cut(s) 621, 773, 788, 1053, 1128, 1230, 1311
TscAI CASTG 1 cut(s) 1251
TseI GCWGC 4 cut(s) 407, 794, 879, 962
TspDTI ATGAA 6 cut(s) 283, 375, 420, 510, 1211, 1248
TspGWI ACGGA 3 cut(s) 153, 388, 747
TspRI CASTG 1 cut(s) 1251
VpaK11BI GGWCC 2 cut(s) 212, 351
XapI RAATTY 2 cut(s) 680, 1265
XmnI GAANNNNTTC 1 cut(s) 593
XspI CTAG 8 cut(s) 48, 489, 614, 908, 1016, 1038, 1199, 1393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.