Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001017

Physical Location & Seq

Genomic Coordinates Forward (+)

40626385 .. 40640528

Gene Structure 14144 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG188100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGTGTACCAATCATGCGTTGAGACTTGATCGAGACCCAGAAACACAGCTATGCTGGTACCTCTGTGCTGAACCCACTTTCCCCTGTTTCTTGTTTCTGCAAATAATGGCCACCATTTCCTTAGTGCCCACGTTGAGCCCTTCTGATTGTGGGCAGGCCCTTCAGTTCCTTTTTCCCAACTGCAAATTCAGAAGCATACAACTCTTTCATCATAGAAAGTGTAATGGGAGGCGAGCTGGGCTTCCTCAGAATCGTGGGTTTCGTGTCTCTTGCCTATCAAAGACAGATGAAGTGCAGATAAGAAGGTATTCACCATTTCTAGAAAGTGCATTACTAGATGGTAATGATACCTTGGTAGCCGATGAGTGGCAGGCAGTTCCTGACATTTGGAGAACTTCAGCTGAGAAATATGGGGATCGTGTAGCATTAACAGATCCGTACCATGATCCACCTTCAAATATGACCTATAAACAGCTGGAACAGGAGATTTTGGACTTCTCTGAAGGCCTAAGAATTGTTGGAGTAAAGCCTGTAGAAAAAATTGCACTTTTTGCTGATAATTCTTGTCGTTGGCTTGTTGCAGATCAGGGCATAATGGCCACTGGCGCAATCAATGTGGCAAGGGGTTCAAGGTCATCAGTTGAAGAATTGATACAAATATACAATCACTCTGAAAGTGTTGCACTTGCTGTGGATAGTCCTGAATTGTTCAATCGGATTGCAGAACCATTCTGTTCCAAGGTTGTCATGAAATTTGTAATTCTGCTTTGGGGGGAGAAGTCAAGCCTGGCCAGTCATGGAAACATCCCTGTGTTTAACTACAAGGATATTCTAGATTTGGGACGAGAAAGCCGCAAGCGTATGCTTAATTCTAATGATGCACGGAAATACTATACACATGAAGCTATCAATTCAAATGATATTGCTACACTAGTATATACAAGTGGAACAACAGGCAACCCGAAAGGTGTCATGCTCACTCATCGAAATTTATTACATCAGATAAGAAACCTCTGGGATGTTGTTCCTGCTGAAATTGGGGACAGATTTCTCAGTATGCTTCCACCATGGCATGCCTATGAACGTGCTGCTGAGTATTTCACATTTACAAATGGAATTGAACAAGTATACACAACTGTGAAGAACTTGAAGGATGATCTGCGACATTATCAACCAAATTATGTCGTTTCAGTTCCTTTAGTGTACGAGACACTTTACAGGGGGATCCAGAAACAGATTTCTACAAGTTCTAAAGCTCGTAAGCTTATTGCACTTTCATTCCTAAGGATCAGTTCGGCATACATGGAGTTTAAGAGAATTTATGAGGGGACATATTTGACAAGGAACCAGAAGCAGCCTTCATATTATGCTTCACTAGTTGATTGGATCAGGGCAAGGATTGTTGCTGCAATATTATGGCCTTTGCATGTGTTGGGAACAAAACTAGTCTATAGTAAAATTCACTCTGCTATTGGAATATCAAAGGCTGGCATTAGTGCTGGAGGTAGTTTGCCAGCACATATTGATAAATTTTTTGAGGCAATAGGCGTAAAACTGCAGAATGGATATGGTTTAACAGAGAGTTCTCCTGCTGTTGCTGCTCGGAGACCAAACTGTAATGTTCTTGGTTCAGTTGGGCATCCACTTCAACATACAGAGTTCAAAGTTGTAGACTCTGAAACTGGTGAAGTTCTCCCACCTGGTTCAAGTGGCATTATAAACGTCAGGGGTCCGCAAGTGATGAAAGGATATTACAAGAATCCAGATGCTACAGAGCAAGTATTAGATGAGGATGGTTGGCTAAGTACTGGCGATATCGGTTGGATTGCTCCTCACCACTCAATAGGTCGAAGCCGTCGTTGTGGAGGTGTTGTTGTCCTTGAAGGACGTGCTAAGGATACTATAGTCCTTTCAACAGGAGAAAACGTTGAACCCGTAGAGCTTGAGGAAGCTGCCATGAGAAGTAGTCTAATTCAACAAATTGTCGTCATTGGCCAGGATCAACGGCGCCTTGGGGCAATAATTGTTCCAAACAAAGAAGAGGCCGTACTTGTAGCGACAAAGACGTTGAGTGTCGATGCTAATACATCTGACCTAAGTAAGGCCAAATTGACAGGCTTGCTGTATGAAGAACTGAGAAAATGGACTTCAGGGTGTTCATTTCAAATTGGACCAATCTTGATTGTGGACGAGCCCTTTACGATTGATAGTGGTTTGATGACTCCAACTATGAAAATTCGAAGAGACAAAGTTGTGGCACAGTTCAAGGAACAAATTGATGAACTCTACAAGAAAAATTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0008922 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016053 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0030497 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

767

Amino Acids

85.85

Weight (kDa)

8.08

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	131 - 585	1e-75	AMP-binding enzyme
AMP-binding_C_3	PF23562	633 - 684	4.8e-10	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23790 AT4G14070
fragaria_vesca	FvH4_4g13140 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151
malus_domestica	MD04G1018700.v1.1 MD04G1018900.v1.1
prunus_persica	Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G187500_v2.0.a1
pyrus_communis	pycom04g01500 pycom04g01510
rosa_chinensis	RchiOBHm_Chr4g0412911 RchiOBHm_Chr4g0413021 RchiOBHm_Chr4g0413231
rosa_laevigata	RLG00000008230 RLG00000008244 RLG00000008246
rosa_multiflora	Rmu_sc0000717.1_g000026 Rmu_sc0005849.1_g000011 Rmu_sc0021560.1_g000001
rosa_roxburghii	Rroxscaffold_5G00357150 Rroxscaffold_5G00357210
rosa_rugosa	Rorug04G0117500 Rorug04G0117600 Rorug04G0117700 Rorug04G0117800 Rorug04G0117900 Rorug04G0118000 Rorug04G0118000 Rorug04G0118100 Rorug04G0118100 Rorug04G0118600
rosa_samantha	Rh4AG176400 Rh4AG177100 Rh4AG178600 Rh4BG177000 Rh4BG177900 Rh4CG187400 Rh4CG188100 Rh4CG189200 Rh4DG173700 Rh4DG173900
rosa_wichuraiana	Rw4G014810 Rw4G014820 Rw4G014850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1718
Acc65I	GGTACC	1 cut(s)	57
AccB1I	GGYRCC	2 cut(s)	57, 2007
AccI	GTMKAC	2 cut(s)	1128, 1671
AciI	CCGC	2 cut(s)	853, 1733
AclI	AACGTT	1 cut(s)	1926
AclWI	GGATC	8 cut(s)	423, 428, 440, 1219, 1232, 1295, 1394, 2007
AcoI	YGGCCR	4 cut(s)	108, 597, 789, 1993
AcsI	RAATTY	8 cut(s)	185, 752, 988, 1317, 1458, 1529, 2235, 2296
AcuI	CTGAAG	4 cut(s)	146, 381, 522, 2133
AcyI	GRCGYC	1 cut(s)	2008
AfaI	GTAC	6 cut(s)	7, 59, 440, 1205, 1807, 2049
AfiI	CCNNNNNNNGG	2 cut(s)	366, 2101
AhlI	ACTAGT	3 cut(s)	931, 1375, 1444
AjiI	CACGTC	1 cut(s)	1889
AjnI	CCWGG	3 cut(s)	786, 1699, 1995
AjuI	GAANNNNNNNTTGG	2 cut(s)	170, 202
AleI	CACNNNNGTG	1 cut(s)	1136
AloI	GAACNNNNNNTCC	2 cut(s)	63, 95
AluBI	AGCT	9 cut(s)	49, 236, 401, 475, 905, 1256, 1264, 1942, 1952
AluI	AGCT	9 cut(s)	49, 236, 401, 475, 905, 1256, 1264, 1942, 1952
Alw26I	GTCTC	6 cut(s)	16, 27, 271, 1202, 1600, 2238
AlwI	GGATC	8 cut(s)	423, 428, 440, 1219, 1232, 1295, 1394, 2007
AlwNI	CAGNNNCTG	1 cut(s)	380
AoxI	GGCC	9 cut(s)	108, 156, 505, 597, 789, 1418, 1993, 2043, 2103
ApeKI	GCWGC	5 cut(s)	1088, 1354, 1406, 1598, 1952
ApoI	RAATTY	8 cut(s)	185, 752, 988, 1317, 1458, 1529, 2235, 2296
Asp700I	GAANNNNTTC	1 cut(s)	307
Asp718I	GGTACC	1 cut(s)	57
AspLEI	GCGC	2 cut(s)	608, 2010
AspS9I	GGNCC	3 cut(s)	157, 1730, 2171
AsuHPI	GGTGA	3 cut(s)	303, 1697, 1826
AsuII	TTCGAA	1 cut(s)	2239
AvaII	GGWCC	2 cut(s)	1730, 2171
AxyI	CCTNAGG	1 cut(s)	1283
BaeGI	GKGCMC	1 cut(s)	129
BaeI	ACNNNNGTAYC	6 cut(s)	49, 82, 339, 372, 1890, 1923
BalI	TGGCCA	4 cut(s)	110, 599, 791, 1995
BamHI	GGATCC	1 cut(s)	1224
BanI	GGYRCC	2 cut(s)	57, 2007
BanII	GRGCYC	2 cut(s)	140, 2196
BarI	GAAGNNNNNNTAC	4 cut(s)	636, 668, 2031, 2063
BbvI	GCAGC	5 cut(s)	1075, 1366, 1393, 1585, 1939
BccI	CCATC	2 cut(s)	332, 1787
BceAI	ACGGC	3 cut(s)	1839, 2021, 2030
BciT130I	CCWGG	3 cut(s)	788, 1701, 1997
BciVI	GTATCC	1 cut(s)	1891
BcoDI	GTCTC	6 cut(s)	16, 27, 271, 1202, 1600, 2238
BcuI	ACTAGT	3 cut(s)	931, 1375, 1444
BfaI	CTAG	6 cut(s)	320, 335, 833, 932, 1376, 1445
BfmI	CTRYAG	5 cut(s)	531, 1450, 1556, 1770, 1902
BfoI	RGCGCY	1 cut(s)	2011
BfuI	GTATCC	1 cut(s)	1891
BisI	GCNGC	6 cut(s)	853, 1089, 1355, 1407, 1599, 1953
BlsI	GCNGC	6 cut(s)	854, 1090, 1356, 1408, 1600, 1954
BmcAI	AGTACT	1 cut(s)	1807
Bme1390I	CCNGG	3 cut(s)	788, 1701, 1997
Bme18I	GGWCC	2 cut(s)	1730, 2171
BmgBI	CACGTC	1 cut(s)	1889
BmgT120I	GGNCC	3 cut(s)	157, 1730, 2171
BmiI	GGNNCC	5 cut(s)	59, 1226, 1346, 1731, 2009
BmrFI	CCNGG	3 cut(s)	788, 1701, 1997
BmsI	GCATC	4 cut(s)	868, 1648, 1756, 2068
BpmI	CTGGAG	1 cut(s)	1521
Bpu10I	CCTNAGC	1 cut(s)	1893
Bpu14I	TTCGAA	1 cut(s)	2239
BpuEI	CTTGAG	1 cut(s)	1964
BsaHI	GRCGYC	1 cut(s)	2008
BsaI	GGTCTC	2 cut(s)	27, 1600
BsaJI	CCNNGG	4 cut(s)	351, 738, 1067, 2011
BsaXI	ACNNNNNCTCC	4 cut(s)	1857, 1887, 1911, 1941
Bsc4I	CCNNNNNNNGG	2 cut(s)	366, 2101
Bse1I	ACTGG	4 cut(s)	607, 792, 1687, 1813
Bse21I	CCTNAGG	1 cut(s)	1283
BseBI	CCWGG	3 cut(s)	788, 1701, 1997
BseDI	CCNNGG	4 cut(s)	351, 738, 1067, 2011
BseGI	GGATG	5 cut(s)	804, 1024, 1159, 1639, 1798
BseLI	CCNNNNNNNGG	2 cut(s)	366, 2101
BseMII	CTCAG	5 cut(s)	260, 393, 1066, 1083, 2126
BseNI	ACTGG	4 cut(s)	607, 792, 1687, 1813
BseRI	GAGGAG	1 cut(s)	1821
BseSI	GKGCMC	1 cut(s)	129
BseXI	GCAGC	5 cut(s)	1075, 1366, 1393, 1585, 1939
BseYI	CCCAGC	1 cut(s)	236
BsgI	GTGCAG	1 cut(s)	314
BshFI	GGCC	9 cut(s)	110, 158, 507, 599, 791, 1420, 1995, 2045, 2105
BshNI	GGYRCC	2 cut(s)	57, 2007
BslFI	GGGAC	3 cut(s)	855, 1055, 1342
BslI	CCNNNNNNNGG	2 cut(s)	366, 2101
BsmAI	GTCTC	6 cut(s)	16, 27, 271, 1202, 1600, 2238
BsmFI	GGGAC	3 cut(s)	855, 1055, 1342
BsnI	GGCC	9 cut(s)	110, 158, 507, 599, 791, 1420, 1995, 2045, 2105
Bso31I	GGTCTC	2 cut(s)	27, 1600
Bsp119I	TTCGAA	1 cut(s)	2239
Bsp1286I	GDGCHC	3 cut(s)	129, 140, 2196
Bsp19I	CCATGG	1 cut(s)	1067
BspACI	CCGC	2 cut(s)	853, 1733
BspANI	GGCC	9 cut(s)	110, 158, 507, 599, 791, 1420, 1995, 2045, 2105
BspCNI	CTCAG	5 cut(s)	259, 394, 1065, 1084, 2127
BspHI	TCATGA	1 cut(s)	747
BspLI	GGNNCC	5 cut(s)	59, 1226, 1346, 1731, 2009
BspMAI	CTGCAG	1 cut(s)	1560
BspPI	GGATC	8 cut(s)	423, 428, 440, 1219, 1232, 1295, 1394, 2007
BspT104I	TTCGAA	1 cut(s)	2239
BspT107I	GGYRCC	2 cut(s)	57, 2007
BspTNI	GGTCTC	2 cut(s)	27, 1600
BsrI	ACTGG	4 cut(s)	607, 792, 1687, 1813
BssECI	CCNNGG	4 cut(s)	351, 738, 1067, 2011
BssNAI	GTATAC	1 cut(s)	1129
BssNI	GRCGYC	1 cut(s)	2008
BssT1I	CCWWGG	4 cut(s)	351, 738, 1067, 2011
Bst1107I	GTATAC	1 cut(s)	1129
Bst2UI	CCWGG	3 cut(s)	788, 1701, 1997
Bst4CI	ACNGT	3 cut(s)	1138, 1616, 2262
Bst6I	CTCTTC	2 cut(s)	2034, 2236
BstACI	GRCGYC	1 cut(s)	2008
BstAPI	GCANNNNNTGC	1 cut(s)	551
BstBI	TTCGAA	1 cut(s)	2239
BstC8I	GCNNGC	8 cut(s)	156, 234, 372, 857, 1074, 1489, 1515, 2120
BstDSI	CCRYGG	1 cut(s)	1067
BstENI	CCTNNNNNAGG	1 cut(s)	2099
BstF5I	GGATG	5 cut(s)	804, 1024, 1159, 1639, 1798
BstH2I	RGCGCY	1 cut(s)	2011
BstHHI	GCGC	2 cut(s)	608, 2010
BstMAI	GTCTC	6 cut(s)	16, 27, 271, 1202, 1600, 2238
BstMWI	GCNNNNNNNGC	4 cut(s)	238, 551, 605, 1598
BstNI	CCWGG	3 cut(s)	788, 1701, 1997
BstNSI	RCATGY	2 cut(s)	1076, 1430
BstSCI	CCNGG	3 cut(s)	786, 1699, 1995
BstSFI	CTRYAG	5 cut(s)	531, 1450, 1556, 1770, 1902
BstSLI	GKGCMC	1 cut(s)	129
BstV1I	GCAGC	5 cut(s)	1075, 1366, 1393, 1585, 1939
BstX2I	RGATCY	2 cut(s)	433, 1224
BstYI	RGATCY	2 cut(s)	433, 1224
BstZ17I	GTATAC	1 cut(s)	1129
Bsu36I	CCTNAGG	1 cut(s)	1283
BsuI	GTATCC	1 cut(s)	1891
BsuRI	GGCC	9 cut(s)	110, 158, 507, 599, 791, 1420, 1995, 2045, 2105
BtgI	CCRYGG	1 cut(s)	1067
BtrI	CACGTC	1 cut(s)	1889
BtsCI	GGATG	5 cut(s)	804, 1024, 1159, 1639, 1798
BtsIMutI	CAGTG	1 cut(s)	600
Cac8I	GCNNGC	8 cut(s)	156, 234, 372, 857, 1074, 1489, 1515, 2120
CaiI	CAGNNNCTG	1 cut(s)	380
CciI	TCATGA	1 cut(s)	747
CfoI	GCGC	2 cut(s)	608, 2010
Cfr13I	GGNCC	3 cut(s)	157, 1730, 2171
CsiI	ACCWGGT	1 cut(s)	1699
Csp6I	GTAC	6 cut(s)	6, 58, 439, 1204, 1806, 2048
CspCI	CAANNNNNGTGG	2 cut(s)	597, 632
CviQI	GTAC	6 cut(s)	6, 58, 439, 1204, 1806, 2048
DinI	GGCGCC	1 cut(s)	2009
EaeI	YGGCCR	4 cut(s)	108, 597, 789, 1993
Eam1104I	CTCTTC	2 cut(s)	2034, 2236
EarI	CTCTTC	2 cut(s)	2034, 2236
Eco130I	CCWWGG	4 cut(s)	351, 738, 1067, 2011
Eco147I	AGGCCT	1 cut(s)	507
Eco24I	GRGCYC	2 cut(s)	140, 2196
Eco31I	GGTCTC	2 cut(s)	27, 1600
Eco32I	GATATC	1 cut(s)	1816
Eco47I	GGWCC	2 cut(s)	1730, 2171
Eco57I	CTGAAG	4 cut(s)	146, 381, 522, 2133
Eco81I	CCTNAGG	1 cut(s)	1283
EcoNI	CCTNNNNNAGG	1 cut(s)	2099
EcoO109I	RGGNCCY	1 cut(s)	157
EcoRII	CCWGG	3 cut(s)	786, 1699, 1995
EcoRV	GATATC	1 cut(s)	1816
EcoT14I	CCWWGG	4 cut(s)	351, 738, 1067, 2011
EcoT38I	GRGCYC	2 cut(s)	140, 2196
EgeI	GGCGCC	1 cut(s)	2009
EheI	GGCGCC	1 cut(s)	2009
ErhI	CCWWGG	4 cut(s)	351, 738, 1067, 2011
FaqI	GGGAC	3 cut(s)	855, 1055, 1342
FblI	GTMKAC	2 cut(s)	1128, 1671
Fnu4HI	GCNGC	6 cut(s)	853, 1089, 1355, 1407, 1599, 1953
FokI	GGATG	5 cut(s)	791, 1031, 1166, 1626, 1805
FriOI	GRGCYC	2 cut(s)	140, 2196
Fsp4HI	GCNGC	6 cut(s)	853, 1089, 1355, 1407, 1599, 1953
FspBI	CTAG	6 cut(s)	320, 335, 833, 932, 1376, 1445
GlaI	GCGC	2 cut(s)	607, 2009
GluI	GCNGC	6 cut(s)	853, 1089, 1355, 1407, 1599, 1953
GsaI	CCCAGC	1 cut(s)	240
GsuI	CTGGAG	1 cut(s)	1521
HaeII	RGCGCY	1 cut(s)	2011
HaeIII	GGCC	9 cut(s)	110, 158, 507, 599, 791, 1420, 1995, 2045, 2105
HhaI	GCGC	2 cut(s)	608, 2010
Hin1I	GRCGYC	1 cut(s)	2008
Hin6I	GCGC	2 cut(s)	606, 2008
HinP1I	GCGC	2 cut(s)	606, 2008
HindIII	AAGCTT	1 cut(s)	1262
HinfI	GANTC	4 cut(s)	250, 1673, 1759, 2221
HphI	GGTGA	3 cut(s)	303, 1697, 1826
Hpy166II	GTNNAC	5 cut(s)	6, 1129, 1204, 1672, 2188
Hpy188III	TCNNGA	9 cut(s)	32, 320, 380, 701, 748, 833, 1228, 1763, 2179
Hpy8I	GTNNAC	5 cut(s)	6, 1129, 1204, 1672, 2188
Hpy99I	CGWCG	1 cut(s)	1860
HpyAV	CCTTC	8 cut(s)	150, 170, 297, 462, 497, 1144, 1368, 1877
HpyCH4III	ACNGT	3 cut(s)	1138, 1616, 2262
HpyCH4IV	ACGT	6 cut(s)	131, 1084, 1722, 1888, 1926, 2066
HpyF10VI	GCNNNNNNNGC	4 cut(s)	238, 551, 605, 1598
HpySE526I	ACGT	6 cut(s)	131, 1084, 1722, 1888, 1926, 2066
Hsp92I	GRCGYC	1 cut(s)	2008
HspAI	GCGC	2 cut(s)	606, 2008
KasI	GGCGCC	1 cut(s)	2007
KpnI	GGTACC	1 cut(s)	61
LmnI	GCTCC	1 cut(s)	1834
Lsp1109I	GCAGC	5 cut(s)	1075, 1366, 1393, 1585, 1939
LweI	GCATC	4 cut(s)	868, 1648, 1756, 2068
MabI	ACCWGGT	1 cut(s)	1699
MaeI	CTAG	6 cut(s)	320, 335, 833, 932, 1376, 1445
MaeII	ACGT	6 cut(s)	131, 1084, 1722, 1888, 1926, 2066
MboII	GAAGA	5 cut(s)	656, 1153, 2051, 2141, 2253
MflI	RGATCY	2 cut(s)	433, 1224
MhlI	GDGCHC	3 cut(s)	129, 140, 2196
MlsI	TGGCCA	4 cut(s)	110, 599, 791, 1995
MluNI	TGGCCA	4 cut(s)	110, 599, 791, 1995
Mly113I	GGCGCC	1 cut(s)	2008
MlyI	GAGTC	2 cut(s)	1667, 2215
MmeI	TCCRAC	3 cut(s)	499, 1802, 2249
Mox20I	TGGCCA	4 cut(s)	110, 599, 791, 1995
MroXI	GAANNNNTTC	1 cut(s)	307
MscI	TGGCCA	4 cut(s)	110, 599, 791, 1995
MseI	TTAA	5 cut(s)	428, 816, 867, 1311, 1574
MslI	CAYNNNNRTG	4 cut(s)	49, 809, 1077, 1136
Msp20I	TGGCCA	4 cut(s)	110, 599, 791, 1995
MspA1I	CMGCKG	2 cut(s)	401, 475
MspR9I	CCNGG	3 cut(s)	788, 1701, 1997
MvaI	CCWGG	3 cut(s)	788, 1701, 1997
MwoI	GCNNNNNNNGC	4 cut(s)	238, 551, 605, 1598
NarI	GGCGCC	1 cut(s)	2008
NcoI	CCATGG	1 cut(s)	1067
NlaIV	GGNNCC	5 cut(s)	59, 1226, 1346, 1731, 2009
NspI	RCATGY	2 cut(s)	1076, 1430
NspV	TTCGAA	1 cut(s)	2239
OliI	CACNNNNGTG	1 cut(s)	1136
PaeI	GCATGC	1 cut(s)	1076
PagI	TCATGA	1 cut(s)	747
PceI	AGGCCT	1 cut(s)	507
PcsI	WCGNNNNNNNCGW	3 cut(s)	259, 1855, 1932
PdmI	GAANNNNTTC	1 cut(s)	307
PfeI	GAWTC	2 cut(s)	250, 1759
PkrI	GCNGC	6 cut(s)	854, 1090, 1356, 1408, 1600, 1954
PleI	GAGTC	2 cut(s)	1667, 2215
PluTI	GGCGCC	1 cut(s)	2011
PpsI	GAGTC	2 cut(s)	1667, 2215
PsiI	TTATAA	1 cut(s)	1718
Psp1406I	AACGTT	1 cut(s)	1926
Psp6I	CCWGG	3 cut(s)	786, 1699, 1995
PspFI	CCCAGC	1 cut(s)	236
PspGI	CCWGG	3 cut(s)	786, 1699, 1995
PspN4I	GGNNCC	5 cut(s)	59, 1226, 1346, 1731, 2009
PspPI	GGNCC	3 cut(s)	157, 1730, 2171
PstI	CTGCAG	1 cut(s)	1560
PstNI	CAGNNNCTG	1 cut(s)	380
PsuI	RGATCY	2 cut(s)	433, 1224
PvuII	CAGCTG	2 cut(s)	401, 475
RsaI	GTAC	6 cut(s)	7, 59, 440, 1205, 1807, 2049
RsaNI	GTAC	6 cut(s)	6, 58, 439, 1204, 1806, 2048
RseI	CAYNNNNRTG	4 cut(s)	49, 809, 1077, 1136
SaqAI	TTAA	5 cut(s)	428, 816, 867, 1311, 1574
SatI	GCNGC	6 cut(s)	853, 1089, 1355, 1407, 1599, 1953
Sau96I	GGNCC	3 cut(s)	157, 1730, 2171
ScaI	AGTACT	1 cut(s)	1807
SchI	GAGTC	2 cut(s)	1667, 2215
ScrFI	CCNGG	3 cut(s)	788, 1701, 1997
SduI	GDGCHC	3 cut(s)	129, 140, 2196
SexAI	ACCWGGT	1 cut(s)	1699
SfaNI	GCATC	4 cut(s)	868, 1648, 1756, 2068
SfcI	CTRYAG	5 cut(s)	531, 1450, 1556, 1770, 1902
SfoI	GGCGCC	1 cut(s)	2009
SfuI	TTCGAA	1 cut(s)	2239
SinI	GGWCC	2 cut(s)	1730, 2171
SmiMI	CAYNNNNRTG	4 cut(s)	49, 809, 1077, 1136
SmlI	CTYRAG	1 cut(s)	1943
SmoI	CTYRAG	1 cut(s)	1943
SpeI	ACTAGT	3 cut(s)	931, 1375, 1444
SphI	GCATGC	1 cut(s)	1076
SseBI	AGGCCT	1 cut(s)	507
SsiI	CCGC	2 cut(s)	853, 1733
SspDI	GGCGCC	1 cut(s)	2007
SspI	AATATT	1 cut(s)	1413
SspMI	CTAG	6 cut(s)	320, 335, 833, 932, 1376, 1445
StuI	AGGCCT	1 cut(s)	507
StyD4I	CCNGG	3 cut(s)	786, 1699, 1995
StyI	CCWWGG	4 cut(s)	351, 738, 1067, 2011
TaaI	ACNGT	3 cut(s)	1138, 1616, 2262
TaiI	ACGT	6 cut(s)	134, 1087, 1725, 1891, 1929, 2069
TaqI	TCGA	5 cut(s)	31, 985, 1849, 2076, 2239
TatI	WGTACW	1 cut(s)	1805
TauI	GCSGC	1 cut(s)	855
TfiI	GAWTC	2 cut(s)	250, 1759
Tru1I	TTAA	5 cut(s)	428, 816, 867, 1311, 1574
Tru9I	TTAA	5 cut(s)	428, 816, 867, 1311, 1574
TscAI	CASTG	1 cut(s)	607
TseI	GCWGC	5 cut(s)	1088, 1354, 1406, 1598, 1952
TspGWI	ACGGA	2 cut(s)	426, 898
TspRI	CASTG	1 cut(s)	607
VpaK11BI	GGWCC	2 cut(s)	1730, 2171
XagI	CCTNNNNNAGG	1 cut(s)	2099
XapI	RAATTY	8 cut(s)	185, 752, 988, 1317, 1458, 1529, 2235, 2296
XbaI	TCTAGA	2 cut(s)	319, 832
XceI	RCATGY	2 cut(s)	1076, 1430
XmiI	GTMKAC	2 cut(s)	1128, 1671
XmnI	GAANNNNTTC	1 cut(s)	307
XspI	CTAG	6 cut(s)	320, 335, 833, 932, 1376, 1445
ZrmI	AGTACT	1 cut(s)	1807

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.