Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0001017

Physical Location & Seq

Genomic Coordinates Forward (+)

34646312 .. 34659320

Gene Structure 13009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG173900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGCCACAGCTTTCTTAACGTCCTCCTTCATTTTGGGCAGTTCCTCTGATTCTGGGCACGCCCTTCCATTCCTCTGTTCTAACAAGAAATTGAGAAGCAGACACAGAGCACGCTACCGAAACCCAACTGGGTTTCATGCTTTTTGCCAATCAAAGACAGATGAAAAGCAGATACGGAGGTATTCACCTTTCCTAGAAGGTGCTTCTGTGGATGGTACTGCAAGTTTGGTGCCTGATGATTGGCAAGCAGTTCCTGATATCTGGAGATCTTCATCTGAGAAATATGGTGATCTGGTAGCATTGACAGATCCATACCATGACCCACCTTCTAGTTTAACTTATAAACAGCTTGAGAAGGAAATTTTAGATTTTTCTGAAGGTCTAAGAATCGTTGGGGTACAGCCTGAAGAAAAAATTGCACTTTTTGCAGATAACTCATGTCGTTGGCTTGTAGCAGATCAAGGTATAATGGCCACCGGAGCAATCAATGTGGTAAGAGGTTCAAGGTCATCAGTCGAAGAGTTACTACAAATATATCACCACTCAGATAGTGTTGCAATTGCTGTCGACAGTCCTGAACTGTTCAATCGGATTTCAGAAGAATTCTGTTCCAAGGCTGTCATGAAATTTGTTGTTCTTCTTTGGGGGGAGAAATCAAGCTTGGTCAGTGATGGGAAGATTCCCATTTTCAACTACAAAGAGATTCTAGATTTGGGACGAAAGAGTTGTAAGAGAAAGTACTTTATGTATGAAGCAATCAACTCGGATGATATTGCTACAGTTGTATATACAAGCGGAACAAGTGGTAACCCAAAAGGTGTCATGCTCACTCATCGAAATCTGTTGCATCAGATTAAGAACCTTGGGGATATTGTACCTGCTGTAGGCGGGGACAAATTTCTCAGCATGCTTCCACCTTGGCATTGCTACGAACGAGCTTCTGAATATTTTGCTTTTGCACGAGGAATTGAACAATTTTACACAACTGTCAGGAAATTGAAGGCTGATTTGCGACAATATCAACCAGATTTTGTAATTTCCGTTCCTTTAGTGTATGAGACACTTTACAGTGGGATTCATAAACAGATTTCTTCCAGCTCTACAGTTCTTAAGCTTATTACACTTACATTCATACGGATCAGTTTGGCATACATGGAGTTTAAGAGGATCTATGAGGGAACATATTTGACAAGGAAACAGAAGCAATCTTCACATCTTGTTTCAATAGCAGATTGGTTATGGGCAAGAGTTGTTGCTTCAGTATTATGGCCTTTGCATGTTATGGGACAGAATCTAATATATAGTAAAATCCAATCTGCTATCGGAATATCAAAGGCTGGCATTAGTGGAGGAGGCAATCTACCTTCACATGTTGATAAGTTTTTTGAGGCAATTGGCATTAAATTGCTGAACGGATATGGTTTAACAGAGACTTCTCCCGTTGTTGCTGCTCGACACCCAAGCTGTAATGTTCTTGGTTCAGTTGGGCATCCGATTCGACATACTGAGTTCAAAGTTGTAGATTCTGAAACTGGTGAAGTTCTCCTACCTGGTTTAAGTGGCATTGTAAAAGTTAGGGGCCCACAAGTAATGAAAGGATACTACAAGAATCCAAGGGCTACAGAGCAAGTATTAGATGAGGATGGTTGGCTAAATACTGGAGATATAGGTTGGATTGCGCCTCATCATTCAATAGGGCGAAGTCGTCGTTGTGGAGGTGTTGTTGTTCTTGAAGGACGTGCAAAGGACACCATAGTGCTTTCAACAGGAGAAAACGTTGAACCGATAGAGCTTGAGGAAGCTGCCTCAAGAAGTAGTCTAATTCAACAAATTGTTGTCATTGGCCAGGATCAACGACGGCTTGGGGCAATAATTGTTCCAAACAAAGAAGAGGCTTTACTTGCAGCTAAGAATTTGTCCCTTGTAGATATTGATGCCTCTGACCTAAGCAAGGAGACAATGAAAAGCTTGTTGTCTCAAGATTTACGAAAATGGACTTCAAGTTGTTCATTTCAAATTGGACGGATCTTAATTGTAGATGAACCCTTTACGATTGATAATGGTTTGATGACTCTGACTATGAAAATTCGAAGGGATAGAGTCGTGGCTCGATACAAGGAACAGATAGACAATCTGTTCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0008922 GO:0009058 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0015645 GO:0016053 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0030497 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

714

Amino Acids

79.58

Weight (kDa)

8.59

Isoelectric Point (pI)

43.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	91 - 535	1.9e-70	AMP-binding enzyme
AMP-binding_C_3	PF23562	583 - 713	3.1e-10	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001017)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23790 AT4G14070
fragaria_vesca	FvH4_4g13140 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151 FvH4_4g13151
malus_domestica	MD04G1018700.v1.1 MD04G1018900.v1.1
prunus_persica	Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G167500_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G168200_v2.0.a1 Prupe.1G187500_v2.0.a1
pyrus_communis	pycom04g01500 pycom04g01510
rosa_chinensis	RchiOBHm_Chr4g0412911 RchiOBHm_Chr4g0413021 RchiOBHm_Chr4g0413231
rosa_laevigata	RLG00000008230 RLG00000008244 RLG00000008246
rosa_multiflora	Rmu_sc0000717.1_g000026 Rmu_sc0005849.1_g000011 Rmu_sc0021560.1_g000001
rosa_roxburghii	Rroxscaffold_5G00357150 Rroxscaffold_5G00357210
rosa_rugosa	Rorug04G0117500 Rorug04G0117600 Rorug04G0117700 Rorug04G0117800 Rorug04G0117900 Rorug04G0118000 Rorug04G0118000 Rorug04G0118100 Rorug04G0118100 Rorug04G0118600
rosa_samantha	Rh4AG176400 Rh4AG177100 Rh4AG178600 Rh4BG177000 Rh4BG177900 Rh4CG187400 Rh4CG188100 Rh4CG189200 Rh4DG173700 Rh4DG173900
rosa_wichuraiana	Rw4G014810 Rw4G014820 Rw4G014850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	342
Acc36I	ACCTGC	1 cut(s)	886
AccB1I	GGYRCC	1 cut(s)	229
AccI	GTMKAC	1 cut(s)	567
AciI	CCGC	2 cut(s)	795, 888
AclI	AACGTT	1 cut(s)	1776
AclWI	GGATC	5 cut(s)	302, 1145, 1175, 1857, 2033
AcoI	YGGCCR	3 cut(s)	3, 471, 1843
AcsI	RAATTY	6 cut(s)	360, 602, 626, 896, 1912, 2085
AcuI	CTGAAG	3 cut(s)	396, 426, 1242
AfaI	GTAC	4 cut(s)	217, 399, 740, 876
AfiI	CCNNNNNNNGG	2 cut(s)	884, 1951
AflII	CTTAAG	1 cut(s)	1109
AflIII	ACRYGT	1 cut(s)	1369
AjiI	CACGTC	1 cut(s)	1739
AjnI	CCWGG	2 cut(s)	1549, 1845
AjuI	GAANNNNNNNTTGG	2 cut(s)	644, 676
AleI	CACNNNNGTG	1 cut(s)	1754
Alw21I	GWGCWC	1 cut(s)	112
Alw26I	GTCTC	4 cut(s)	1052, 1424, 1949, 1980
AlwI	GGATC	5 cut(s)	302, 1145, 1175, 1857, 2033
AlwNI	CAGNNNCTG	1 cut(s)	254
AoxI	GGCC	5 cut(s)	3, 471, 1268, 1579, 1843
ApaI	GGGCCC	1 cut(s)	1583
ApeKI	GCWGC	3 cut(s)	1448, 1802, 1904
ApoI	RAATTY	6 cut(s)	360, 602, 626, 896, 1912, 2085
AspLEI	GCGC	1 cut(s)	1681
AspS9I	GGNCC	2 cut(s)	1579, 1580
AsuHPI	GGTGA	4 cut(s)	177, 299, 530, 1547
AsuII	TTCGAA	1 cut(s)	2089
BaeGI	GKGCMC	2 cut(s)	60, 1583
BaeI	ACNNNNGTAYC	2 cut(s)	164, 197
BalI	TGGCCA	3 cut(s)	5, 473, 1845
BanI	GGYRCC	1 cut(s)	229
BanII	GRGCYC	1 cut(s)	1583
BarI	GAAGNNNNNNTAC	6 cut(s)	510, 542, 1530, 1562, 1881, 1913
BauI	CACGAG	1 cut(s)	960
Bbv12I	GWGCWC	1 cut(s)	112
BbvI	GCAGC	3 cut(s)	1435, 1789, 1916
BccI	CCATC	3 cut(s)	206, 665, 1637
BceAI	ACGGC	1 cut(s)	1874
BcgI	CGANNNNNNTGC	4 cut(s)	744, 778, 1478, 1512
BciT130I	CCWGG	2 cut(s)	1551, 1847
BciVI	GTATCC	1 cut(s)	1592
BcoDI	GTCTC	4 cut(s)	1052, 1424, 1949, 1980
BfaI	CTAG	3 cut(s)	194, 330, 707
BfmI	CTRYAG	4 cut(s)	777, 882, 1101, 1620
BfrI	CTTAAG	1 cut(s)	1109
BfuAI	ACCTGC	1 cut(s)	886
BfuI	GTATCC	1 cut(s)	1592
BglII	AGATCT	1 cut(s)	266
BisI	GCNGC	3 cut(s)	1449, 1803, 1905
BlsI	GCNGC	3 cut(s)	1450, 1804, 1906
BmcAI	AGTACT	1 cut(s)	740
Bme1390I	CCNGG	2 cut(s)	1551, 1847
BmgBI	CACGTC	1 cut(s)	1739
BmgT120I	GGNCC	2 cut(s)	1579, 1580
BmiI	GGNNCC	3 cut(s)	231, 1580, 1581
BmrFI	CCNGG	2 cut(s)	1551, 1847
BmrI	ACTGGG	1 cut(s)	138
BmsI	GCATC	3 cut(s)	856, 1498, 1924
BmuI	ACTGGG	1 cut(s)	138
BpmI	CTGGAG	2 cut(s)	283, 1680
Bpu10I	CCTNAGC	1 cut(s)	1946
Bpu14I	TTCGAA	1 cut(s)	2089
BpuEI	CTTGAG	4 cut(s)	371, 1792, 1814, 1962
BsaBI	GATNNNNATC	1 cut(s)	271
BsaJI	CCNNGG	4 cut(s)	612, 862, 917, 1613
BsaWI	WCCGGW	1 cut(s)	476
BsaXI	ACNNNNNCTCC	4 cut(s)	1707, 1737, 1761, 1791
Bsc4I	CCNNNNNNNGG	2 cut(s)	884, 1951
Bse1I	ACTGG	3 cut(s)	133, 1537, 1663
Bse3DI	GCAATG	1 cut(s)	922
Bse8I	GATNNNNATC	1 cut(s)	271
BseBI	CCWGG	2 cut(s)	1551, 1847
BseDI	CCNNGG	4 cut(s)	612, 862, 917, 1613
BseGI	GGATG	4 cut(s)	217, 772, 1489, 1648
BseJI	GATNNNNATC	1 cut(s)	271
BseLI	CCNNNNNNNGG	2 cut(s)	884, 1951
BseMI	GCAATG	1 cut(s)	922
BseMII	CTCAG	4 cut(s)	267, 558, 916, 1497
BseNI	ACTGG	3 cut(s)	133, 1537, 1663
BseRI	GAGGAG	1 cut(s)	1365
BseSI	GKGCMC	2 cut(s)	60, 1583
BseXI	GCAGC	3 cut(s)	1435, 1789, 1916
BshFI	GGCC	5 cut(s)	5, 473, 1270, 1581, 1845
BshNI	GGYRCC	1 cut(s)	229
BsiHKAI	GWGCWC	1 cut(s)	112
BsiSI	CCGG	1 cut(s)	477
BslFI	GGGAC	4 cut(s)	729, 905, 1299, 1903
BslI	CCNNNNNNNGG	2 cut(s)	884, 1951
BsmAI	GTCTC	4 cut(s)	1052, 1424, 1949, 1980
BsmFI	GGGAC	4 cut(s)	729, 905, 1299, 1903
BsnI	GGCC	5 cut(s)	5, 473, 1270, 1581, 1845
Bsp119I	TTCGAA	1 cut(s)	2089
Bsp120I	GGGCCC	1 cut(s)	1579
Bsp1286I	GDGCHC	3 cut(s)	60, 112, 1583
Bsp143I	GATC	8 cut(s)	266, 289, 307, 457, 1137, 1167, 1849, 2025
BspACI	CCGC	2 cut(s)	795, 888
BspANI	GGCC	5 cut(s)	5, 473, 1270, 1581, 1845
BspCNI	CTCAG	4 cut(s)	268, 557, 915, 1498
BspHI	TCATGA	1 cut(s)	621
BspLI	GGNNCC	3 cut(s)	231, 1580, 1581
BspMI	ACCTGC	1 cut(s)	886
BspPI	GGATC	5 cut(s)	302, 1145, 1175, 1857, 2033
BspT104I	TTCGAA	1 cut(s)	2089
BspT107I	GGYRCC	1 cut(s)	229
BspTI	CTTAAG	1 cut(s)	1109
BsrDI	GCAATG	1 cut(s)	922
BsrI	ACTGG	3 cut(s)	133, 1537, 1663
BssECI	CCNNGG	4 cut(s)	612, 862, 917, 1613
BssMI	GATC	8 cut(s)	266, 289, 307, 457, 1137, 1167, 1849, 2025
BssSI	CACGAG	1 cut(s)	960
BssT1I	CCWWGG	4 cut(s)	612, 862, 917, 1613
Bst2BI	CACGAG	1 cut(s)	960
Bst2UI	CCWGG	2 cut(s)	1551, 1847
Bst4CI	ACNGT	6 cut(s)	572, 582, 781, 988, 1070, 1105
Bst6I	CTCTTC	2 cut(s)	513, 1884
BstAFI	CTTAAG	1 cut(s)	1109
BstAPI	GCANNNNNTGC	1 cut(s)	425
BstBI	TTCGAA	1 cut(s)	2089
BstC8I	GCNNGC	5 cut(s)	60, 112, 246, 908, 1339
BstDEI	CTNAG	7 cut(s)	276, 383, 544, 902, 1506, 1908, 1946
BstEII	GGTNACC	1 cut(s)	806
BstENI	CCTNNNNNAGG	2 cut(s)	882, 1949
BstF5I	GGATG	4 cut(s)	217, 772, 1489, 1648
BstHHI	GCGC	1 cut(s)	1681
BstKTI	GATC	8 cut(s)	269, 292, 310, 460, 1140, 1170, 1852, 2028
BstMAI	GTCTC	4 cut(s)	1052, 1424, 1949, 1980
BstMBI	GATC	8 cut(s)	266, 289, 307, 457, 1137, 1167, 1849, 2025
BstMWI	GCNNNNNNNGC	3 cut(s)	425, 479, 1901
BstNI	CCWGG	2 cut(s)	1551, 1847
BstNSI	RCATGY	3 cut(s)	910, 1280, 1373
BstPI	GGTNACC	1 cut(s)	806
BstSCI	CCNGG	2 cut(s)	1549, 1845
BstSFI	CTRYAG	4 cut(s)	777, 882, 1101, 1620
BstSLI	GKGCMC	2 cut(s)	60, 1583
BstV1I	GCAGC	3 cut(s)	1435, 1789, 1916
BstX2I	RGATCY	4 cut(s)	266, 307, 1167, 2025
BstYI	RGATCY	4 cut(s)	266, 307, 1167, 2025
BsuI	GTATCC	1 cut(s)	1592
BsuRI	GGCC	5 cut(s)	5, 473, 1270, 1581, 1845
BtrI	CACGTC	1 cut(s)	1739
BtsCI	GGATG	4 cut(s)	217, 772, 1489, 1648
BtsIMutI	CAGTG	2 cut(s)	673, 1075
BveI	ACCTGC	1 cut(s)	886
Cac8I	GCNNGC	5 cut(s)	60, 112, 246, 908, 1339
CaiI	CAGNNNCTG	1 cut(s)	254
CciI	TCATGA	1 cut(s)	621
CfoI	GCGC	1 cut(s)	1681
Cfr13I	GGNCC	2 cut(s)	1579, 1580
CsiI	ACCWGGT	1 cut(s)	1549
Csp6I	GTAC	4 cut(s)	216, 398, 739, 875
CspCI	CAANNNNNGTGG	2 cut(s)	471, 506
CviAII	CATG	9 cut(s)	137, 317, 438, 622, 823, 907, 1153, 1277, 1370
CviQI	GTAC	4 cut(s)	216, 398, 739, 875
DdeI	CTNAG	7 cut(s)	276, 383, 544, 902, 1506, 1908, 1946
DpnI	GATC	8 cut(s)	268, 291, 309, 459, 1139, 1169, 1851, 2027
DpnII	GATC	8 cut(s)	266, 289, 307, 457, 1137, 1167, 1849, 2025
EaeI	YGGCCR	3 cut(s)	3, 471, 1843
Eam1104I	CTCTTC	2 cut(s)	513, 1884
EarI	CTCTTC	2 cut(s)	513, 1884
Eco130I	CCWWGG	4 cut(s)	612, 862, 917, 1613
Eco24I	GRGCYC	1 cut(s)	1583
Eco32I	GATATC	1 cut(s)	259
Eco57I	CTGAAG	3 cut(s)	396, 426, 1242
Eco91I	GGTNACC	1 cut(s)	806
EcoNI	CCTNNNNNAGG	2 cut(s)	882, 1949
EcoO109I	RGGNCCY	1 cut(s)	1579
EcoO65I	GGTNACC	1 cut(s)	806
EcoRI	GAATTC	1 cut(s)	602
EcoRII	CCWGG	2 cut(s)	1549, 1845
EcoRV	GATATC	1 cut(s)	259
EcoT14I	CCWWGG	4 cut(s)	612, 862, 917, 1613
EcoT38I	GRGCYC	1 cut(s)	1583
ErhI	CCWWGG	4 cut(s)	612, 862, 917, 1613
FaeI	CATG	9 cut(s)	140, 320, 441, 625, 826, 910, 1156, 1280, 1373
FaqI	GGGAC	4 cut(s)	729, 905, 1299, 1903
FatI	CATG	9 cut(s)	136, 316, 437, 621, 822, 906, 1152, 1276, 1369
FauI	CCCGC	1 cut(s)	881
FblI	GTMKAC	1 cut(s)	567
Fnu4HI	GCNGC	3 cut(s)	1449, 1803, 1905
FokI	GGATG	4 cut(s)	224, 779, 1476, 1655
FriOI	GRGCYC	1 cut(s)	1583
Fsp4HI	GCNGC	3 cut(s)	1449, 1803, 1905
FspBI	CTAG	3 cut(s)	194, 330, 707
GlaI	GCGC	1 cut(s)	1680
GluI	GCNGC	3 cut(s)	1449, 1803, 1905
GsuI	CTGGAG	2 cut(s)	283, 1680
HaeIII	GGCC	5 cut(s)	5, 473, 1270, 1581, 1845
HapII	CCGG	1 cut(s)	477
HhaI	GCGC	1 cut(s)	1681
Hin1II	CATG	9 cut(s)	140, 320, 441, 625, 826, 910, 1156, 1280, 1373
Hin6I	GCGC	1 cut(s)	1679
HinP1I	GCGC	1 cut(s)	1679
HincII	GTYRAC	1 cut(s)	568
HindII	GTYRAC	1 cut(s)	568
HindIII	AAGCTT	3 cut(s)	658, 1112, 1966
HpaII	CCGG	1 cut(s)	477
HphI	GGTGA	4 cut(s)	177, 299, 530, 1547
Hpy166II	GTNNAC	1 cut(s)	568
Hpy188III	TCNNGA	9 cut(s)	254, 262, 575, 622, 707, 991, 1730, 1809, 1979
Hpy8I	GTNNAC	1 cut(s)	568
Hpy99I	CGWCG	2 cut(s)	1710, 1860
HpyCH4III	ACNGT	6 cut(s)	572, 582, 781, 988, 1070, 1105
HpyCH4IV	ACGT	3 cut(s)	20, 1738, 1776
HpyCH4V	TGCA	9 cut(s)	221, 419, 428, 557, 847, 959, 1276, 1742, 1904
HpyF10VI	GCNNNNNNNGC	3 cut(s)	425, 479, 1901
HpyF3I	CTNAG	7 cut(s)	276, 383, 544, 902, 1506, 1908, 1946
HpySE526I	ACGT	3 cut(s)	20, 1738, 1776
Hsp92II	CATG	9 cut(s)	140, 320, 441, 625, 826, 910, 1156, 1280, 1373
HspAI	GCGC	1 cut(s)	1679
Kzo9I	GATC	8 cut(s)	266, 289, 307, 457, 1137, 1167, 1849, 2025
LmnI	GCTCC	1 cut(s)	479
Lsp1109I	GCAGC	3 cut(s)	1435, 1789, 1916
LweI	GCATC	3 cut(s)	856, 1498, 1924
MabI	ACCWGGT	1 cut(s)	1549
MaeI	CTAG	3 cut(s)	194, 330, 707
MaeII	ACGT	3 cut(s)	20, 1738, 1776
MaeIII	GTNAC	2 cut(s)	522, 806
MalI	GATC	8 cut(s)	268, 291, 309, 459, 1139, 1169, 1851, 2027
MboI	GATC	8 cut(s)	266, 289, 307, 457, 1137, 1167, 1849, 2025
MboII	GAAGA	9 cut(s)	261, 419, 530, 611, 629, 688, 1083, 1200, 1901
MfeI	CAATTG	2 cut(s)	558, 1392
MflI	RGATCY	4 cut(s)	266, 307, 1167, 2025
MhlI	GDGCHC	3 cut(s)	60, 112, 1583
MlsI	TGGCCA	3 cut(s)	5, 473, 1845
MluNI	TGGCCA	3 cut(s)	5, 473, 1845
MlyI	GAGTC	2 cut(s)	2065, 2109
MmeI	TCCRAC	1 cut(s)	1652
Mox20I	TGGCCA	3 cut(s)	5, 473, 1845
MscI	TGGCCA	3 cut(s)	5, 473, 1845
MseI	TTAA	9 cut(s)	17, 335, 855, 1110, 1161, 1401, 1424, 1556, 2030
MslI	CAYNNNNRTG	1 cut(s)	1754
Msp20I	TGGCCA	3 cut(s)	5, 473, 1845
MspCI	CTTAAG	1 cut(s)	1109
MspI	CCGG	1 cut(s)	477
MspR9I	CCNGG	2 cut(s)	1551, 1847
MunI	CAATTG	2 cut(s)	558, 1392
MvaI	CCWGG	2 cut(s)	1551, 1847
MwoI	GCNNNNNNNGC	3 cut(s)	425, 479, 1901
NdeII	GATC	8 cut(s)	266, 289, 307, 457, 1137, 1167, 1849, 2025
NlaIII	CATG	9 cut(s)	140, 320, 441, 625, 826, 910, 1156, 1280, 1373
NlaIV	GGNNCC	3 cut(s)	231, 1580, 1581
NspI	RCATGY	3 cut(s)	910, 1280, 1373
NspV	TTCGAA	1 cut(s)	2089
OliI	CACNNNNGTG	1 cut(s)	1754
PaeI	GCATGC	1 cut(s)	910
PagI	TCATGA	1 cut(s)	621
PciI	ACATGT	1 cut(s)	1369
PfeI	GAWTC	9 cut(s)	50, 387, 679, 703, 1075, 1291, 1495, 1523, 1609
PkrI	GCNGC	3 cut(s)	1450, 1804, 1906
PleI	GAGTC	2 cut(s)	2065, 2108
PpsI	GAGTC	2 cut(s)	2065, 2108
PscI	ACATGT	1 cut(s)	1369
PsiI	TTATAA	1 cut(s)	342
Psp1406I	AACGTT	1 cut(s)	1776
Psp6I	CCWGG	2 cut(s)	1549, 1845
PspEI	GGTNACC	1 cut(s)	806
PspGI	CCWGG	2 cut(s)	1549, 1845
PspN4I	GGNNCC	3 cut(s)	231, 1580, 1581
PspOMI	GGGCCC	1 cut(s)	1579
PspPI	GGNCC	2 cut(s)	1579, 1580
PsrI	GAACNNNNNNTAC	2 cut(s)	1026, 1058
PstNI	CAGNNNCTG	1 cut(s)	254
PsuI	RGATCY	4 cut(s)	266, 307, 1167, 2025
RsaI	GTAC	4 cut(s)	217, 399, 740, 876
RsaNI	GTAC	4 cut(s)	216, 398, 739, 875
RseI	CAYNNNNRTG	1 cut(s)	1754
SalI	GTCGAC	1 cut(s)	566
SaqAI	TTAA	9 cut(s)	17, 335, 855, 1110, 1161, 1401, 1424, 1556, 2030
SatI	GCNGC	3 cut(s)	1449, 1803, 1905
Sau3AI	GATC	8 cut(s)	266, 289, 307, 457, 1137, 1167, 1849, 2025
Sau96I	GGNCC	2 cut(s)	1579, 1580
ScaI	AGTACT	1 cut(s)	740
SchI	GAGTC	2 cut(s)	2065, 2109
ScrFI	CCNGG	2 cut(s)	1551, 1847
SduI	GDGCHC	3 cut(s)	60, 112, 1583
SexAI	ACCWGGT	1 cut(s)	1549
SfaNI	GCATC	3 cut(s)	856, 1498, 1924
SfcI	CTRYAG	4 cut(s)	777, 882, 1101, 1620
SfuI	TTCGAA	1 cut(s)	2089
SmiMI	CAYNNNNRTG	1 cut(s)	1754
SmlI	CTYRAG	5 cut(s)	350, 1109, 1793, 1807, 1977
SmoI	CTYRAG	5 cut(s)	350, 1109, 1793, 1807, 1977
SphI	GCATGC	1 cut(s)	910
SsiI	CCGC	2 cut(s)	795, 888
SspI	AATATT	1 cut(s)	947
SspMI	CTAG	3 cut(s)	194, 330, 707
StyD4I	CCNGG	2 cut(s)	1549, 1845
StyI	CCWWGG	4 cut(s)	612, 862, 917, 1613
TaaI	ACNGT	6 cut(s)	572, 582, 781, 988, 1070, 1105
TaiI	ACGT	3 cut(s)	23, 1741, 1779
TaqI	TCGA	7 cut(s)	516, 567, 835, 1453, 1498, 2089, 2110
TatI	WGTACW	1 cut(s)	738
TfiI	GAWTC	9 cut(s)	50, 387, 679, 703, 1075, 1291, 1495, 1523, 1609
Tru1I	TTAA	9 cut(s)	17, 335, 855, 1110, 1161, 1401, 1424, 1556, 2030
Tru9I	TTAA	9 cut(s)	17, 335, 855, 1110, 1161, 1401, 1424, 1556, 2030
TscAI	CASTG	2 cut(s)	673, 1075
TseI	GCWGC	3 cut(s)	1448, 1802, 1904
TspGWI	ACGGA	5 cut(s)	190, 1030, 1150, 1428, 2038
TspRI	CASTG	2 cut(s)	673, 1075
Vha464I	CTTAAG	1 cut(s)	1109
XagI	CCTNNNNNAGG	2 cut(s)	882, 1949
XapI	RAATTY	6 cut(s)	360, 602, 626, 896, 1912, 2085
XbaI	TCTAGA	1 cut(s)	706
XceI	RCATGY	3 cut(s)	910, 1280, 1373
XmiI	GTMKAC	1 cut(s)	567
XspI	CTAG	3 cut(s)	194, 330, 707
ZrmI	AGTACT	1 cut(s)	740

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.