Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002964

Physical Location & Seq

Genomic Coordinates Forward (+)

15043672 .. 15054785

Gene Structure 11114 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G176700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2871 bp

ATGTTGAAGGGAAGAGAAAGCTTGATTCGATTGGTGGGCAAACGTAGGCGATGCCTTCCAAACCGCCAATCACTCCTCTCCTCCCCTACCCAGAGCTCATTGAATCTGCGTGCTGATGAAAATGGAAAATTCGTTAGCATTGATAACGTAGAAGGGTCGTCGAATCAAGAAGAACAAGGAAACACTGAATATAGTGCGGTGGGGCTTGTAGATGAGAGAGTTACTTGCCCTGTTTGCGGAAACAAAGTCAGTGGCCAAAGCAACATCATCAATTCTCATCTGGATGTGTGCCTGTCAAGGGGAACTAAACGGAAGCTGACCCAACGCACACTCCTAGAGTTAAACTTCTGCCCAGACTCAAAAGCTCAAATTCGTACCTGTTATTCGAAAGAGTTAGGAAATGATTTATTTCATGCAGCACATGATGACAGTCATGTACAGCGTGTGGTTCATGGATTATCTGACATCAGTGCTGTTGAAGAAAGTGCTGATGATGTGTGTGGATCATCGTTAAATTTAATGGATGATATGCAAAATCAAGTTGGTATGTGTGGAAACCCAATTCTCAAGGACAGGATCAATGCCAATGTTGATGATCTCTCATGGGCCCTAAAGAACGAGGTGCCTGATGTTGAGATGACTGTTACTCTGGACGACATATCTGGGGTCATTCTTGAAACTTTTATTGTTGGCCGTAAATTTTGCGATGGAAATGAGTTAGACCTTGGGGCAAGAATTTCTCTTTTAAGAGACCCAGATAACCCTAAAGATCCAAATGCCATTAAGGTTATTTCTTCAGATTCAGGATGCCGCAAAGTGCTTGGTTTTCTCCCTCGCAAGCTAGCTCAATATTTGTCTCCTCTGATGGAGAAGTACTTCCTAAACTTTGAGGGATCTGTGATCTCTGTTCCAAAGAATTCTATTGATGTTGTCCCAATACAGATCATGTCCCACAAGACTGGGTCGCGTGGTGCTAAGGTATATTATAATGACGAGGCTTTCAAATGTCTATGGAAAAATGCTCAGCAAGTAATTGAATCTACAAAGTCTTGTCCACCCAGTGCAGTAAAGTATCAGGAGAACTTTTGTGTTTTCATACATGATGTTTTGAAAAGCAATTCTCACCTCTTGACAGAAGACGAAAAGAATTTCATAGAGTTATTTACTTCACTGTCAGATGATAGTCAGAGGCTATTTGTTCGGCTCTATACACGGAAAGGGCCATGGTTTCGGCAATCAGCTATTTCATACCCAGAAGTGTTGGATCCTGAGCAAGCAGTGAAAGGGCTATCTGAAACAGGTTATGTATCTTGCTTTGGAATTCCAAATGAACTATGTGATGATGATATAAAGGAGATTTTGGATTTGCTCACTGTATCTGAACTACGTGAAATTTTATGCATGCTTAAGCAGAATTGCAATCGTGCCATGAGAAAGCAGGATCTTATTGTGTCTCTTATTTCTTTGTATAAAGAGGAGTTATGCCCATTACTACCTTGTATGGTTTTGGATCGAACAGGTGCCTGTGTTAGGATATCTTTAAAAGCAGAGTCCCTCATTTGGCGTGCTGAGAGGCTTTTCTTCCTGAATGGAGAGCAGGATTTATTGGCATTTCTACTGGTGGATTTGGGAATAGTCAAGTATCCAACTTACAAGTGCATAATTTCACAACAAATTTTCTCAGGTCGAGATGGCTTGCTTGCTTATGAAGAGGCCATTGAAGTCGCACAGATAATAGATGAAGCTCTGGATGGAAGCAACATTGAATTGGTGATAAAATGCATTGATATTGCTGATTCCCGTATATCCAGTGAATCAACTCAATCTTTAACCTCTGAATCAATGGCTCCATTTCTTTCCCGCTTTTCTGCAAAATATGTCTACTCAAAAGTGGTTTTACTTGGAATTTCCTTTCTTGAGCGCGAGCATAGGTACAGTGATGCAATATATCTACTGAAGCGGCTGCTAAAGTGCTTCACTTGTGATGGTAGAAGAGGATATTGGACACTGAGGTTGTCGATTGACTTGGAGCACATGGGATATCTTAATGACAGCCTTTCTGTTGCCGAAAATGGGTTACTGGATCGATGGGTACGCGCTGGTTCAAGAGTGGCACTTCAAAGGAGAGTCCTTCGGTTAGGAAAACCACCAAGGCGATGGAAAACTCCTAGTTTTGCAGAGTCCGTCAAGAGGAAGATCATGGAGGTTCATGTTCAAGGGAGACCTCTAAATTCTGTGATAGGTATGAAGAGCAGGTTTTATGGAGAAGATGGGCAGCAATGTGGGGTAGAGCGGCTAGCCCTGCAGCATTATGCTGCAGAAGGATGGCAGGGTGTTCATACAGAGAGTGGCATTTGGTTAACTATTTTTGGTCTTCTTATGTGGGATATTATATTTTCTGATATACCAAACGTCTTCCGCACCAGATTTCAGACTGCTCCCTTGGATTTGGAGACTGATAGCTTTTATCTAGTGAGAAAGAGCCATATAGAATCTCACCTACAGAGTATTCATGATGGCATGGCTGAGGAGATCCTCATCACTTCATGGGAATTACATGAGGGAACCACATGTAGAGGAGTTAACTGGGACCGGCATTCCCTCTCTGAGCTTCGGGCAGCTGTTACATGCATCGGTGGCCTTTGTTTGGCCTCATTCTGTCGACATCTAGCAAAAGATTATCGAAGCTGGTCAAGTGGAATGCCAGATTTATTGTTGTGGCGTTTCCATGGGAATTACAGAGGTGAAGCCAAGCTTGTCGAAGTTAAAGGCCCCAGGGATAGACTCTCTGAACAGCAGCGGGCATGGCTGCTGCTTTTAATGGACTGTGGGTTCAATGCTGAGGTCTGTAAAGTGAGCCCTCTTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004527 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0008150 GO:0008152 GO:0008409 GO:0009987 GO:0016043 GO:0016787 GO:0016788 GO:0016888 GO:0016893 GO:0017108 GO:0022402 GO:0022414 GO:0033554 GO:0034641 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048256 GO:0048285 GO:0050896 GO:0051276 GO:0051321 GO:0051716 GO:0061982 GO:0070192 GO:0070336 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

HIRAN VRR_NUC

Protein Analysis

957

Amino Acids

107.98

Weight (kDa)

6.12

Isoelectric Point (pI)

41.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002964)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48360 AT1G48360 AT1G48360 AT1G48360 AT1G48360 AT1G48360
fragaria_vesca	FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370
malus_domestica	MD00G1163900.v1.1 MD09G1250200.v1.1 MD09G1250400.v1.1
prunus_persica	Prupe.1G176700_v2.0.a1 Prupe.1G176700_v2.0.a1 Prupe.1G176700_v2.0.a1 Prupe.1G176700_v2.0.a1 Prupe.1G176700_v2.0.a1
pyrus_communis	pycom04g02280 pycom13g29380
rosa_chinensis	RchiOBHm_Chr4g0410481
rosa_laevigata	RLG00000008424
rosa_multiflora	Rmu_sc0001969.1_g000008 Rmu_sc0016181.1_g000004
rosa_roxburghii	Rroxscaffold_5G00355290
rosa_rugosa	Rorug04G0114400
rosa_samantha	Rh4AG160900 Rh4BG160300 Rh4CG173100 Rh4DG156400
rosa_wichuraiana	Rw0G014390 Rw0G014400 Rw4G013420 Rw4G037760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	987
Acc36I	ACCTGC	1 cut(s)	2244
AccB1I	GGYRCC	2 cut(s)	622, 1520
AccBSI	CCGCTC	1 cut(s)	2293
AccI	GTMKAC	2 cut(s)	1881, 2662
AccII	CGCG	3 cut(s)	967, 1923, 2097
AciI	CCGC	9 cut(s)	64, 197, 237, 811, 1861, 1960, 2293, 2419, 2800
AcoI	YGGCCR	2 cut(s)	253, 691
AcuI	CTGAAG	2 cut(s)	780, 1976
AdeI	CACNNNGTG	1 cut(s)	1061
AfaI	GTAC	5 cut(s)	376, 438, 875, 1934, 2094
AfiI	CCNNNNNNNGG	7 cut(s)	236, 298, 1530, 1560, 2073, 2190, 2647
AflII	CTTAAG	1 cut(s)	1406
AflIII	ACRYGT	1 cut(s)	2570
AjnI	CCWGG	1 cut(s)	2774
AjuI	GAANNNNNNNTTGG	2 cut(s)	1984, 2016
AloI	GAACNNNNNNTCC	2 cut(s)	2816, 2848
Alw21I	GWGCWC	2 cut(s)	98, 2034
Alw26I	GTCTC	5 cut(s)	744, 861, 1458, 2215, 2447
AoxI	GGCC	8 cut(s)	253, 606, 691, 1220, 1713, 2638, 2649, 2770
ApaI	GGGCCC	1 cut(s)	610
ApeKI	GCWGC	9 cut(s)	416, 1963, 2275, 2305, 2315, 2618, 2797, 2809, 2812
Asp700I	GAANNNNTTC	1 cut(s)	875
AspLEI	GCGC	2 cut(s)	1923, 2099
AspS9I	GGNCC	5 cut(s)	606, 607, 1220, 2590, 2771
AsuHPI	GGTGA	4 cut(s)	1115, 1783, 2489, 2756
AsuII	TTCGAA	1 cut(s)	386
AsuNHI	GCTAGC	2 cut(s)	841, 2296
AvaII	GGWCC	1 cut(s)	2590
BaeGI	GKGCMC	1 cut(s)	610
BalI	TGGCCA	1 cut(s)	255
BamHI	GGATCC	1 cut(s)	1264
BanI	GGYRCC	2 cut(s)	622, 1520
BanII	GRGCYC	3 cut(s)	98, 610, 2861
BbsI	GAAGAC	3 cut(s)	1143, 2366, 2407
Bbv12I	GWGCWC	2 cut(s)	98, 2034
BbvCI	CCTCAGC	2 cut(s)	2526, 2841
BbvI	GCAGC	9 cut(s)	428, 1950, 2287, 2302, 2317, 2630, 2796, 2799, 2809
BceAI	ACGGC	1 cut(s)	678
BciT130I	CCWGG	1 cut(s)	2776
BciVI	GTATCC	1 cut(s)	1653
BcoDI	GTCTC	5 cut(s)	744, 861, 1458, 2215, 2447
BfaI	CTAG	6 cut(s)	335, 842, 2169, 2297, 2471, 2669
BfmI	CTRYAG	3 cut(s)	2303, 2316, 2501
BfrI	CTTAAG	1 cut(s)	1406
BfuAI	ACCTGC	1 cut(s)	2244
BfuI	GTATCC	1 cut(s)	1653
BlpI	GCTNAGC	1 cut(s)	1023
BmcAI	AGTACT	1 cut(s)	875
Bme1390I	CCNGG	1 cut(s)	2776
Bme18I	GGWCC	1 cut(s)	2590
BmgT120I	GGNCC	5 cut(s)	606, 607, 1220, 2590, 2771
BmiI	GGNNCC	8 cut(s)	608, 624, 1266, 1522, 1848, 2566, 2591, 2773
BmrFI	CCNGG	1 cut(s)	2776
BmrI	ACTGGG	3 cut(s)	969, 1053, 2596
BmsI	GCATC	4 cut(s)	41, 797, 1930, 2640
BmtI	GCTAGC	2 cut(s)	845, 2300
BmuI	ACTGGG	3 cut(s)	969, 1053, 2596
BpiI	GAAGAC	3 cut(s)	1143, 2366, 2407
Bpu10I	CCTNAGC	4 cut(s)	975, 1269, 2526, 2841
Bpu1102I	GCTNAGC	1 cut(s)	1023
Bpu14I	TTCGAA	1 cut(s)	386
BpuEI	CTTGAG	2 cut(s)	551, 1937
Bsa29I	ATCGAT	1 cut(s)	2086
BsaAI	YACGTR	1 cut(s)	1388
BsaBI	GATNNNNATC	1 cut(s)	2537
BsaI	GGTCTC	2 cut(s)	744, 2215
BsaJI	CCNNGG	7 cut(s)	724, 1223, 2150, 2442, 2728, 2774, 2775
BsaXI	ACNNNNNCTCC	2 cut(s)	315, 345
Bsc4I	CCNNNNNNNGG	7 cut(s)	236, 298, 1530, 1560, 2073, 2190, 2647
Bse118I	RCCGGY	1 cut(s)	2592
Bse1I	ACTGG	6 cut(s)	964, 1059, 1623, 1809, 2085, 2591
Bse3DI	GCAATG	1 cut(s)	2285
Bse8I	GATNNNNATC	1 cut(s)	2537
BseBI	CCWGG	1 cut(s)	2776
BseCI	ATCGAT	1 cut(s)	2086
BseDI	CCNNGG	7 cut(s)	724, 1223, 2150, 2442, 2728, 2774, 2775
BseGI	GGATG	5 cut(s)	289, 529, 812, 1756, 2330
BseJI	GATNNNNATC	1 cut(s)	2537
BseLI	CCNNNNNNNGG	7 cut(s)	236, 298, 1530, 1560, 2073, 2190, 2647
BseMI	GCAATG	1 cut(s)	2285
BseMII	CTCAG	8 cut(s)	1037, 1260, 1560, 1695, 2000, 2517, 2598, 2832
BseNI	ACTGG	6 cut(s)	964, 1059, 1623, 1809, 2085, 2591
BseRI	GAGGAG	6 cut(s)	65, 70, 849, 1490, 2543, 2592
BseSI	GKGCMC	1 cut(s)	610
BseXI	GCAGC	9 cut(s)	428, 1950, 2287, 2302, 2317, 2630, 2796, 2799, 2809
BsgI	GTGCAG	1 cut(s)	1083
Bsh1236I	CGCG	3 cut(s)	967, 1923, 2097
BshFI	GGCC	8 cut(s)	255, 608, 693, 1222, 1715, 2640, 2651, 2772
BshNI	GGYRCC	2 cut(s)	622, 1520
BshVI	ATCGAT	1 cut(s)	2086
BsiHKAI	GWGCWC	2 cut(s)	98, 2034
BsiSI	CCGG	1 cut(s)	2593
BslFI	GGGAC	4 cut(s)	917, 934, 1537, 2603
BslI	CCNNNNNNNGG	7 cut(s)	236, 298, 1530, 1560, 2073, 2190, 2647
BsmAI	GTCTC	5 cut(s)	744, 861, 1458, 2215, 2447
BsmFI	GGGAC	4 cut(s)	917, 934, 1537, 2603
BsmI	GAATGC	2 cut(s)	2596, 2706
BsnI	GGCC	8 cut(s)	255, 608, 693, 1222, 1715, 2640, 2651, 2772
Bso31I	GGTCTC	2 cut(s)	744, 2215
Bsp119I	TTCGAA	1 cut(s)	386
Bsp120I	GGGCCC	1 cut(s)	606
Bsp1286I	GDGCHC	4 cut(s)	98, 610, 2034, 2861
Bsp1407I	TGTACA	1 cut(s)	436
Bsp1720I	GCTNAGC	1 cut(s)	1023
Bsp19I	CCATGG	2 cut(s)	1223, 2728
BspACI	CCGC	9 cut(s)	64, 197, 237, 811, 1861, 1960, 2293, 2419, 2800
BspANI	GGCC	8 cut(s)	255, 608, 693, 1222, 1715, 2640, 2651, 2772
BspCNI	CTCAG	8 cut(s)	1036, 1261, 1561, 1694, 2001, 2518, 2599, 2833
BspDI	ATCGAT	1 cut(s)	2086
BspFNI	CGCG	3 cut(s)	967, 1923, 2097
BspHI	TCATGA	1 cut(s)	2512
BspLI	GGNNCC	8 cut(s)	608, 624, 1266, 1522, 1848, 2566, 2591, 2773
BspMAI	CTGCAG	2 cut(s)	2307, 2320
BspMI	ACCTGC	1 cut(s)	2244
BspOI	GCTAGC	2 cut(s)	845, 2300
BspQI	GCTCTTC	1 cut(s)	2243
BspT104I	TTCGAA	1 cut(s)	386
BspT107I	GGYRCC	2 cut(s)	622, 1520
BspTI	CTTAAG	1 cut(s)	1406
BspTNI	GGTCTC	2 cut(s)	744, 2215
BsrBI	CCGCTC	1 cut(s)	2293
BsrDI	GCAATG	1 cut(s)	2285
BsrFI	RCCGGY	1 cut(s)	2592
BsrGI	TGTACA	1 cut(s)	436
BsrI	ACTGG	6 cut(s)	964, 1059, 1623, 1809, 2085, 2591
BssAI	RCCGGY	1 cut(s)	2592
BssECI	CCNNGG	7 cut(s)	724, 1223, 2150, 2442, 2728, 2774, 2775
BssT1I	CCWWGG	5 cut(s)	724, 1223, 2150, 2442, 2728
Bst2UI	CCWGG	1 cut(s)	2776
Bst4CI	ACNGT	6 cut(s)	431, 643, 1173, 1375, 1937, 2828
Bst6I	CTCTTC	4 cut(s)	7, 1704, 1987, 2243
BstAFI	CTTAAG	1 cut(s)	1406
BstAUI	TGTACA	1 cut(s)	436
BstBAI	YACGTR	1 cut(s)	1388
BstBI	TTCGAA	1 cut(s)	386
BstDEI	CTNAG	9 cut(s)	975, 1023, 1269, 1569, 1681, 2009, 2526, 2607, 2841
BstDSI	CCRYGG	2 cut(s)	1223, 2728
BstENI	CCTNNNNNAGG	1 cut(s)	1528
BstF5I	GGATG	5 cut(s)	289, 529, 812, 1756, 2330
BstFNI	CGCG	3 cut(s)	967, 1923, 2097
BstHHI	GCGC	2 cut(s)	1923, 2099
BstMAI	GTCTC	5 cut(s)	744, 861, 1458, 2215, 2447
BstMWI	GCNNNNNNNGC	4 cut(s)	234, 2302, 2637, 2806
BstNI	CCWGG	1 cut(s)	2776
BstNSI	RCATGY	3 cut(s)	1405, 2574, 2631
BstSCI	CCNGG	1 cut(s)	2774
BstSFI	CTRYAG	3 cut(s)	2303, 2316, 2501
BstSLI	GKGCMC	1 cut(s)	610
BstUI	CGCG	3 cut(s)	967, 1923, 2097
BstV1I	GCAGC	9 cut(s)	428, 1950, 2287, 2302, 2317, 2630, 2796, 2799, 2809
BstV2I	GAAGAC	3 cut(s)	1143, 2366, 2407
BstX2I	RGATCY	5 cut(s)	769, 893, 1264, 1441, 2532
BstXI	CCANNNNNNTGG	2 cut(s)	959, 2157
BstYI	RGATCY	5 cut(s)	769, 893, 1264, 1441, 2532
Bsu15I	ATCGAT	1 cut(s)	2086
BsuI	GTATCC	1 cut(s)	1653
BsuRI	GGCC	8 cut(s)	255, 608, 693, 1222, 1715, 2640, 2651, 2772
BsuTUI	ATCGAT	1 cut(s)	2086
BtgI	CCRYGG	2 cut(s)	1223, 2728
BtgZI	GCGATG	3 cut(s)	64, 720, 2170
BtsCI	GGATG	5 cut(s)	289, 529, 812, 1756, 2330
BtsI	GCAGTG	1 cut(s)	1284
BveI	ACCTGC	1 cut(s)	2244
CciI	TCATGA	1 cut(s)	2512
CfoI	GCGC	2 cut(s)	1923, 2099
Cfr10I	RCCGGY	1 cut(s)	2592
Cfr13I	GGNCC	5 cut(s)	606, 607, 1220, 2590, 2771
ClaI	ATCGAT	1 cut(s)	2086
Csp6I	GTAC	5 cut(s)	375, 437, 874, 1933, 2093
CspCI	CAANNNNNGTGG	2 cut(s)	232, 267
CviQI	GTAC	5 cut(s)	375, 437, 874, 1933, 2093
DdeI	CTNAG	9 cut(s)	975, 1023, 1269, 1569, 1681, 2009, 2526, 2607, 2841
DraI	TTTAAA	1 cut(s)	1542
DraIII	CACNNNGTG	1 cut(s)	1061
EaeI	YGGCCR	2 cut(s)	253, 691
Eam1104I	CTCTTC	4 cut(s)	7, 1704, 1987, 2243
EarI	CTCTTC	4 cut(s)	7, 1704, 1987, 2243
Ecl136II	GAGCTC	1 cut(s)	96
Eco130I	CCWWGG	5 cut(s)	724, 1223, 2150, 2442, 2728
Eco24I	GRGCYC	3 cut(s)	98, 610, 2861
Eco31I	GGTCTC	2 cut(s)	744, 2215
Eco32I	GATATC	2 cut(s)	1536, 2042
Eco47I	GGWCC	1 cut(s)	2590
Eco53kI	GAGCTC	1 cut(s)	96
Eco57I	CTGAAG	2 cut(s)	780, 1976
EcoICRI	GAGCTC	1 cut(s)	96
EcoNI	CCTNNNNNAGG	1 cut(s)	1528
EcoO109I	RGGNCCY	2 cut(s)	607, 2771
EcoRI	GAATTC	2 cut(s)	916, 1320
EcoRII	CCWGG	1 cut(s)	2774
EcoRV	GATATC	2 cut(s)	1536, 2042
EcoT14I	CCWWGG	5 cut(s)	724, 1223, 2150, 2442, 2728
EcoT22I	ATGCAT	3 cut(s)	1403, 1784, 2633
EcoT38I	GRGCYC	3 cut(s)	98, 610, 2861
ErhI	CCWWGG	5 cut(s)	724, 1223, 2150, 2442, 2728
FalI	AAGNNNNNCTT	2 cut(s)	2739, 2771
FaqI	GGGAC	4 cut(s)	917, 934, 1537, 2603
FauI	CCCGC	2 cut(s)	1868, 2793
FblI	GTMKAC	2 cut(s)	1881, 2662
FokI	GGATG	5 cut(s)	296, 536, 819, 1763, 2337
FriOI	GRGCYC	3 cut(s)	98, 610, 2861
FspBI	CTAG	6 cut(s)	335, 842, 2169, 2297, 2471, 2669
GlaI	GCGC	2 cut(s)	1922, 2098
HaeIII	GGCC	8 cut(s)	255, 608, 693, 1222, 1715, 2640, 2651, 2772
HapII	CCGG	1 cut(s)	2593
HhaI	GCGC	2 cut(s)	1923, 2099
Hin6I	GCGC	2 cut(s)	1921, 2097
HinP1I	GCGC	2 cut(s)	1921, 2097
HincII	GTYRAC	3 cut(s)	2361, 2584, 2663
HindII	GTYRAC	3 cut(s)	2361, 2584, 2663
HindIII	AAGCTT	2 cut(s)	19, 2753
HpaI	GTTAAC	2 cut(s)	2361, 2584
HpaII	CCGG	1 cut(s)	2593
HphI	GGTGA	4 cut(s)	1115, 1783, 2489, 2756
Hpy166II	GTNNAC	5 cut(s)	1055, 1882, 2361, 2584, 2663
Hpy8I	GTNNAC	5 cut(s)	1055, 1882, 2361, 2584, 2663
Hpy99I	CGWCG	1 cut(s)	163
HpyAV	CCTTC	4 cut(s)	65, 146, 2141, 2315
HpyCH4III	ACNGT	6 cut(s)	431, 643, 1173, 1375, 1937, 2828
HpyCH4IV	ACGT	4 cut(s)	43, 147, 1387, 2412
HpyF10VI	GCNNNNNNNGC	4 cut(s)	234, 2302, 2637, 2806
HpyF3I	CTNAG	9 cut(s)	975, 1023, 1269, 1569, 1681, 2009, 2526, 2607, 2841
HpySE526I	ACGT	4 cut(s)	43, 147, 1387, 2412
HspAI	GCGC	2 cut(s)	1921, 2097
KspAI	GTTAAC	2 cut(s)	2361, 2584
LguI	GCTCTTC	1 cut(s)	2243
LmnI	GCTCC	3 cut(s)	1852, 2029, 2443
Lsp1109I	GCAGC	9 cut(s)	428, 1950, 2287, 2302, 2317, 2630, 2796, 2799, 2809
LweI	GCATC	4 cut(s)	41, 797, 1930, 2640
MaeI	CTAG	6 cut(s)	335, 842, 2169, 2297, 2471, 2669
MaeII	ACGT	4 cut(s)	43, 147, 1387, 2412
MaeIII	GTNAC	4 cut(s)	220, 643, 2076, 2623
MbiI	CCGCTC	1 cut(s)	2293
MflI	RGATCY	5 cut(s)	769, 893, 1264, 1441, 2532
MhlI	GDGCHC	4 cut(s)	98, 610, 2034, 2861
MlsI	TGGCCA	1 cut(s)	255
MluNI	TGGCCA	1 cut(s)	255
MlyI	GAGTC	5 cut(s)	350, 1559, 2136, 2189, 2778
MmeI	TCCRAC	2 cut(s)	1242, 1670
Mox20I	TGGCCA	1 cut(s)	255
Mph1103I	ATGCAT	3 cut(s)	1403, 1784, 2633
MroXI	GAANNNNTTC	1 cut(s)	875
MscI	TGGCCA	1 cut(s)	255
MslI	CAYNNNNRTG	1 cut(s)	282
Msp20I	TGGCCA	1 cut(s)	255
MspA1I	CMGCKG	2 cut(s)	2621, 2800
MspCI	CTTAAG	1 cut(s)	1406
MspI	CCGG	1 cut(s)	2593
MspR9I	CCNGG	1 cut(s)	2776
Mva1269I	GAATGC	2 cut(s)	2596, 2706
MvaI	CCWGG	1 cut(s)	2776
MvnI	CGCG	3 cut(s)	967, 1923, 2097
MwoI	GCNNNNNNNGC	4 cut(s)	234, 2302, 2637, 2806
NcoI	CCATGG	2 cut(s)	1223, 2728
NheI	GCTAGC	2 cut(s)	841, 2296
NlaIV	GGNNCC	8 cut(s)	608, 624, 1266, 1522, 1848, 2566, 2591, 2773
NsiI	ATGCAT	3 cut(s)	1403, 1784, 2633
NspI	RCATGY	3 cut(s)	1405, 2574, 2631
NspV	TTCGAA	1 cut(s)	386
PaeI	GCATGC	1 cut(s)	1405
PagI	TCATGA	1 cut(s)	2512
PasI	CCCWGGG	1 cut(s)	2775
PciI	ACATGT	1 cut(s)	2570
PciSI	GCTCTTC	1 cut(s)	2243
PctI	GAATGC	2 cut(s)	2596, 2706
PdmI	GAANNNNTTC	1 cut(s)	875
PfeI	GAWTC	9 cut(s)	25, 103, 163, 800, 1037, 1796, 1814, 1838, 2492
PflFI	GACNNNGTC	1 cut(s)	961
PleI	GAGTC	5 cut(s)	350, 1558, 2135, 2188, 2778
PpsI	GAGTC	5 cut(s)	350, 1558, 2135, 2188, 2778
Ppu21I	YACGTR	1 cut(s)	1388
PscI	ACATGT	1 cut(s)	2570
PsiI	TTATAA	1 cut(s)	987
Psp124BI	GAGCTC	1 cut(s)	98
Psp6I	CCWGG	1 cut(s)	2774
PspGI	CCWGG	1 cut(s)	2774
PspN4I	GGNNCC	8 cut(s)	608, 624, 1266, 1522, 1848, 2566, 2591, 2773
PspOMI	GGGCCC	1 cut(s)	606
PspPI	GGNCC	5 cut(s)	606, 607, 1220, 2590, 2771
PstI	CTGCAG	2 cut(s)	2307, 2320
PsuI	RGATCY	5 cut(s)	769, 893, 1264, 1441, 2532
PsyI	GACNNNGTC	1 cut(s)	961
PvuII	CAGCTG	1 cut(s)	2621
RsaI	GTAC	5 cut(s)	376, 438, 875, 1934, 2094
RsaNI	GTAC	5 cut(s)	375, 437, 874, 1933, 2093
RseI	CAYNNNNRTG	1 cut(s)	282
SacI	GAGCTC	1 cut(s)	98
SalI	GTCGAC	1 cut(s)	2661
SapI	GCTCTTC	1 cut(s)	2243
Sau96I	GGNCC	5 cut(s)	606, 607, 1220, 2590, 2771
ScaI	AGTACT	1 cut(s)	875
SchI	GAGTC	5 cut(s)	350, 1559, 2136, 2189, 2778
ScrFI	CCNGG	1 cut(s)	2776
SduI	GDGCHC	4 cut(s)	98, 610, 2034, 2861
SfaNI	GCATC	4 cut(s)	41, 797, 1930, 2640
SfcI	CTRYAG	3 cut(s)	2303, 2316, 2501
SfuI	TTCGAA	1 cut(s)	386
SinI	GGWCC	1 cut(s)	2590
SmiMI	CAYNNNNRTG	1 cut(s)	282
SmlI	CTYRAG	3 cut(s)	566, 1406, 1916
SmoI	CTYRAG	3 cut(s)	566, 1406, 1916
SphI	GCATGC	1 cut(s)	1405
SsiI	CCGC	9 cut(s)	64, 197, 237, 811, 1861, 1960, 2293, 2419, 2800
SspI	AATATT	1 cut(s)	851
SspMI	CTAG	6 cut(s)	335, 842, 2169, 2297, 2471, 2669
SstI	GAGCTC	1 cut(s)	98
StyD4I	CCNGG	1 cut(s)	2774
StyI	CCWWGG	5 cut(s)	724, 1223, 2150, 2442, 2728
TaaI	ACNGT	6 cut(s)	431, 643, 1173, 1375, 1937, 2828
TaiI	ACGT	4 cut(s)	46, 150, 1390, 2415
TatI	WGTACW	2 cut(s)	436, 873
TauI	GCSGC	3 cut(s)	813, 1963, 2296
TfiI	GAWTC	9 cut(s)	25, 103, 163, 800, 1037, 1796, 1814, 1838, 2492
TseI	GCWGC	9 cut(s)	416, 1963, 2275, 2305, 2315, 2618, 2797, 2809, 2812
TspGWI	ACGGA	3 cut(s)	325, 1228, 2173
Tth111I	GACNNNGTC	1 cut(s)	961
Vha464I	CTTAAG	1 cut(s)	1406
VpaK11BI	GGWCC	1 cut(s)	2590
XagI	CCTNNNNNAGG	1 cut(s)	1528
XceI	RCATGY	3 cut(s)	1405, 2574, 2631
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2154
XmiI	GTMKAC	2 cut(s)	1881, 2662
XmnI	GAANNNNTTC	1 cut(s)	875
XspI	CTAG	6 cut(s)	335, 842, 2169, 2297, 2471, 2669
ZrmI	AGTACT	1 cut(s)	875
Zsp2I	ATGCAT	3 cut(s)	1403, 1784, 2633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.