Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0016181.1

Orthogroup ID

OG0002964

Physical Location & Seq

Genomic Coordinates Forward (+)

33788 .. 42531

Gene Structure 8744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0016181.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2670 bp

atgctaaagggaagagaaagcttgagccgattggtgggcaaacgcaggcgtttccttcccaatcgtcattcactcctctctgccccttccaccacccagagcttattgaatctggatatcgatccaaatggcagactcgtgtccccggaaggctcttcaaatcaagacgaacaagaaaacacgctggtgggctccgttgcttgccctgtttgcagcgtcaagctcagtgcccaaaacaacaccatcaattctcatctggatgagtgtctatctagaggaaccaaacgaaagctaacccagcgcacacttctagagctgaacttctgcccagtgtcgaaatttcaaaatttgagggctgttgacgatagtcaaaatcaggttgacagtccatccagagacccaatcaacaaggacgagatcagtgaggtgccggattttgatgtgaccatcactcaggacgacatgtatggggtgattcttgaaacttttattgttggccgcaggtttggtgatcaaactgatttatgtcttggtgcaagcatttatctctcaagagatcctgataatgttaaggatcctaatgctatcaaggttgtttattcagattcgggatgccttaaaatgcttggctttctccctcgcaagctagctgagtatttgtctcctctgatagaccagtatggtctaaattttgagggatgcgttacctctgttcccaaacgttctattgatgttgtcccaatacagatagtgtgtcacaagaccagtgataataaggactttaatgatgacaaggttttcaaatgtttatggagaaatgctctgcaagtaattgaatctacaaagtcctgtccgcccagtgcaataaaatatcaggataacttttgtgttttcatacgtgaggttttgagaaacagttctcacctcttgacagatgatgaaaagaatttcatcaagtcatttacttcaatgtcagatgatagtcagaggctatttgttcggctttatacacggaaaggcccatggtttcggctgtctgctatttcatacccagaagtactggatccccaacaagcagtgaaagagctatctgagacagggtatgcatcttgctttgaaattacaaataaactatctgatgattgtattaaggagattttggatttgctcactgtatctgagctacgtgaaatcttgtgcatccttaagcagagttgcaatcgtggcctaagaaagcaggatctcatttcatctcttatatcttcttacgatgaagatttgtgcccattactacctagtatggttttgcacagaacaggatcctgtattaggatatcttcaaatgcggagtcccttatctggcgtgctgagaggcttttcttcctgaatggtgaacaggatctctcggcatttctactggtggatttgggaatagtcaagtatccaacttacaagtgcatagtctcacaacaaattttctcagctcgagatgatttgcttggctatgaagaggctattgaagtggcacaaatagttgatgaagctcttgacggaagcaacactggattggtcttaaagtgcataaagatagctgattcccatttatccaatccggttcaatccttgacctctgaatcaatggctccattcctttcccacttttcagctacatttgtctactcaaaagtggttttactaggaatttcttttcttgagcgtgagcataggtacaatgatgctatctatttactgaaaaggctgctgaattgtttcgctcgtgatggtagaagaggatactggacactacggttatcaattgatttggagcacatgggctatctgaatgagagccttttggttgctgaaaatgggttactagatgaatgggtgcgtgctggttcaagagtggcacttcaaaggagagtccttcgcttgggaaaaccaccgaggcgatggaaaactcctagttttgcagagtctgtcaagaggaagatcatggaggtaaatgttcaagggagacctttaaattgtgcaattggcacaaagagcaggttttatggagaagatggggagcaatgcggtgtagagcagctagctctgcaatattatgccgaggaaggtggatggcagggtgttcatacagagagtggcatttggttgactatttttggacttcttatgtgggatattatattttccaatgtaccaaatgtcttccgcaccagatttcagactgctcccttggatttagagactgatagcttttatctagtgagaaagaaccatatcgagtctcacctacagaaaattcttgatggcatggctgaagagattctcatcacttcatgggagttacatgagggaacagcatgtcgaggagttaactgggggcgacattccctctctgagcttcgggcagctgttacatgcatcggtggcccatgtgtggctgcattttgtcgacatcttgcacaagattatcgtagttggtcaagtggaatgccagatttacttctgtggcgcttccatgggaaatacagaggtgaagcgaagcttgttgaagttaaaggccccagggatagactctctgaacagcagcgagcatggctattgcttttaatggattgtgggttcaatgccgaggtctgtaaagtgagccctattgtctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004527 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0008150 GO:0008152 GO:0008409 GO:0009987 GO:0016043 GO:0016787 GO:0016788 GO:0016888 GO:0016893 GO:0017108 GO:0022402 GO:0022414 GO:0033554 GO:0034641 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048256 GO:0048285 GO:0050896 GO:0051276 GO:0051321 GO:0051716 GO:0061982 GO:0070192 GO:0070336 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

HIRAN VRR_NUC

Protein Analysis

889

Amino Acids

100.61

Weight (kDa)

6.22

Isoelectric Point (pI)

45.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002964)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48360 AT1G48360 AT1G48360 AT1G48360 AT1G48360 AT1G48360
fragaria_vesca	FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370 FvH4_4g12370
malus_domestica	MD00G1163900.v1.1 MD09G1250200.v1.1 MD09G1250400.v1.1
prunus_persica	Prupe.1G176700_v2.0.a1 Prupe.1G176700_v2.0.a1 Prupe.1G176700_v2.0.a1 Prupe.1G176700_v2.0.a1 Prupe.1G176700_v2.0.a1
pyrus_communis	pycom04g02280 pycom13g29380
rosa_chinensis	RchiOBHm_Chr4g0410481
rosa_laevigata	RLG00000008424
rosa_multiflora	Rmu_sc0001969.1_g000008 Rmu_sc0016181.1_g000004
rosa_roxburghii	Rroxscaffold_5G00355290
rosa_rugosa	Rorug04G0114400
rosa_samantha	Rh4AG160900 Rh4BG160300 Rh4CG173100 Rh4DG156400
rosa_wichuraiana	Rw0G014390 Rw0G014400 Rw4G013420 Rw4G037760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	492, 2040
AccB1I	GGYRCC	1 cut(s)	427
AccI	GTMKAC	2 cut(s)	1677, 2461
AciI	CCGC	5 cut(s)	499, 854, 1346, 2079, 2218
AclI	AACGTT	1 cut(s)	721
AcoI	YGGCCR	1 cut(s)	496
AcsI	RAATTY	7 cut(s)	338, 346, 688, 946, 1473, 1701, 2307
AcuI	CTGAAG	1 cut(s)	2346
AfaI	GTAC	3 cut(s)	1059, 1730, 2205
AfiI	CCNNNNNNNGG	5 cut(s)	34, 1329, 1359, 1933, 2446
AflII	CTTAAG	1 cut(s)	1205
AflIII	ACRYGT	1 cut(s)	462
AjnI	CCWGG	1 cut(s)	2573
AleI	CACNNNNGTG	1 cut(s)	185
AloI	GAACNNNNNNTCC	2 cut(s)	2615, 2647
Alw21I	GWGCWC	1 cut(s)	1830
Alw26I	GTCTC	7 cut(s)	390, 666, 1088, 1468, 2011, 2246, 2298
AlwNI	CAGNNNCTG	1 cut(s)	1979
Ama87I	CYCGRG	1 cut(s)	1485
AoxI	GGCC	5 cut(s)	496, 1018, 1225, 2437, 2569
ApeKI	GCWGC	6 cut(s)	213, 1759, 2089, 2417, 2450, 2596
ApoI	RAATTY	7 cut(s)	338, 346, 688, 946, 1473, 1701, 2307
ArsI	GACNNNNNNTTYG	2 cut(s)	1334, 1366
Asp700I	GAANNNNTTC	3 cut(s)	916, 1769, 2331
AspLEI	GCGC	2 cut(s)	303, 2523
AspS9I	GGNCC	3 cut(s)	1019, 2438, 2570
AsuC2I	CCSGG	1 cut(s)	146
AsuHPI	GGTGA	6 cut(s)	484, 521, 914, 1403, 2288, 2555
AsuNHI	GCTAGC	2 cut(s)	646, 2092
AvaI	CYCGRG	1 cut(s)	1485
BaeGI	GKGCMC	2 cut(s)	232, 1286
BamHI	GGATCC	3 cut(s)	574, 1063, 1319
BanI	GGYRCC	1 cut(s)	427
BanII	GRGCYC	2 cut(s)	194, 2660
BauI	CACGAG	2 cut(s)	137, 1776
BbsI	GAAGAC	1 cut(s)	2206
Bbv12I	GWGCWC	1 cut(s)	1830
BbvI	GCAGC	6 cut(s)	225, 1746, 2101, 2429, 2437, 2608
BccI	CCATC	8 cut(s)	251, 397, 455, 1775, 1947, 2060, 2118, 2309
BciT130I	CCWGG	1 cut(s)	2575
BciVI	GTATCC	2 cut(s)	1452, 1787
BclI	TGATCA	1 cut(s)	511
BcnI	CCSGG	1 cut(s)	146
BcoDI	GTCTC	7 cut(s)	390, 666, 1088, 1468, 2011, 2246, 2298
BfaI	CTAG	9 cut(s)	273, 311, 647, 1296, 1697, 1877, 1965, 2093, 2270
BfmI	CTRYAG	1 cut(s)	2300
BfoI	RGCGCY	1 cut(s)	2524
BfrI	CTTAAG	1 cut(s)	1205
BfuAI	ACCTGC	2 cut(s)	492, 2040
BfuI	GTATCC	2 cut(s)	1452, 1787
BisI	GCNGC	7 cut(s)	214, 499, 1760, 2090, 2418, 2451, 2597
BlsI	GCNGC	7 cut(s)	215, 500, 1761, 2091, 2419, 2452, 2598
BmcAI	AGTACT	1 cut(s)	1059
Bme1390I	CCNGG	2 cut(s)	146, 2575
BmeT110I	CYCGRG	1 cut(s)	1485
BmgT120I	GGNCC	3 cut(s)	1019, 2438, 2570
BmiI	GGNNCC	8 cut(s)	193, 280, 429, 576, 1065, 1321, 1644, 2572
BmrFI	CCNGG	2 cut(s)	146, 2575
BmrI	ACTGGG	3 cut(s)	323, 852, 2395
BmsI	GCATC	6 cut(s)	602, 689, 1115, 1209, 1726, 2439
BmtI	GCTAGC	2 cut(s)	650, 2096
BmuI	ACTGGG	3 cut(s)	323, 852, 2395
BoxI	GACNNNNGTC	2 cut(s)	139, 366
BpiI	GAAGAC	1 cut(s)	2206
BplI	GAGNNNNNCTC	2 cut(s)	805, 837
BpuEI	CTTGAG	3 cut(s)	43, 535, 1733
BpuMI	CCSGG	1 cut(s)	146
Bsa29I	ATCGAT	1 cut(s)	120
BsaAI	YACGTR	2 cut(s)	899, 1187
BsaBI	GATNNNNATC	2 cut(s)	120, 2336
BsaI	GGTCTC	2 cut(s)	390, 2011
BsaJI	CCNNGG	9 cut(s)	144, 1022, 1946, 2112, 2241, 2527, 2573, 2574, 2640
BsaWI	WCCGGW	1 cut(s)	1612
Bsc4I	CCNNNNNNNGG	5 cut(s)	34, 1329, 1359, 1933, 2446
Bse1I	ACTGG	9 cut(s)	329, 676, 765, 858, 1065, 1422, 1567, 1802, 2390
Bse3DI	GCAATG	1 cut(s)	2081
Bse8I	GATNNNNATC	2 cut(s)	120, 2336
BseBI	CCWGG	1 cut(s)	2575
BseCI	ATCGAT	1 cut(s)	120
BseDI	CCNNGG	9 cut(s)	144, 1022, 1946, 2112, 2241, 2527, 2573, 2574, 2640
BseGI	GGATG	6 cut(s)	265, 389, 617, 704, 1200, 2129
BseJI	GATNNNNATC	2 cut(s)	120, 2336
BseLI	CCNNNNNNNGG	5 cut(s)	34, 1329, 1359, 1933, 2446
BseMI	GCAATG	1 cut(s)	2081
BseMII	CTCAG	8 cut(s)	238, 467, 642, 1083, 1170, 1359, 1494, 2397
BseNI	ACTGG	9 cut(s)	329, 676, 765, 858, 1065, 1422, 1567, 1802, 2390
BseRI	GAGGAG	3 cut(s)	65, 654, 2391
BseSI	GKGCMC	2 cut(s)	232, 1286
BseXI	GCAGC	6 cut(s)	225, 1746, 2101, 2429, 2437, 2608
BseYI	CCCAGC	1 cut(s)	297
BshFI	GGCC	5 cut(s)	498, 1020, 1227, 2439, 2571
BshNI	GGYRCC	1 cut(s)	427
BshVI	ATCGAT	1 cut(s)	120
BsiHKAI	GWGCWC	1 cut(s)	1830
BsiHKCI	CYCGRG	1 cut(s)	1485
BsiSI	CCGG	3 cut(s)	146, 431, 1613
BslFI	GGGAC	3 cut(s)	127, 722, 1336
BslI	CCNNNNNNNGG	5 cut(s)	34, 1329, 1359, 1933, 2446
BsmAI	GTCTC	7 cut(s)	390, 666, 1088, 1468, 2011, 2246, 2298
BsmFI	GGGAC	3 cut(s)	127, 722, 1336
BsmI	GAATGC	1 cut(s)	2505
BsnI	GGCC	5 cut(s)	498, 1020, 1227, 2439, 2571
Bso31I	GGTCTC	2 cut(s)	390, 2011
BsoBI	CYCGRG	1 cut(s)	1485
Bsp1286I	GDGCHC	5 cut(s)	194, 232, 1286, 1830, 2660
Bsp19I	CCATGG	2 cut(s)	1022, 2527
BspACI	CCGC	5 cut(s)	499, 854, 1346, 2079, 2218
BspANI	GGCC	5 cut(s)	498, 1020, 1227, 2439, 2571
BspCNI	CTCAG	8 cut(s)	237, 466, 643, 1084, 1171, 1360, 1493, 2398
BspDI	ATCGAT	1 cut(s)	120
BspLI	GGNNCC	8 cut(s)	193, 280, 429, 576, 1065, 1321, 1644, 2572
BspMI	ACCTGC	2 cut(s)	492, 2040
BspOI	GCTAGC	2 cut(s)	650, 2096
BspQI	GCTCTTC	1 cut(s)	160
BspT107I	GGYRCC	1 cut(s)	427
BspTI	CTTAAG	1 cut(s)	1205
BspTNI	GGTCTC	2 cut(s)	390, 2011
BsrDI	GCAATG	1 cut(s)	2081
BsrI	ACTGG	9 cut(s)	329, 676, 765, 858, 1065, 1422, 1567, 1802, 2390
BssECI	CCNNGG	9 cut(s)	144, 1022, 1946, 2112, 2241, 2527, 2573, 2574, 2640
BssSI	CACGAG	2 cut(s)	137, 1776
BssT1I	CCWWGG	3 cut(s)	1022, 2241, 2527
Bst2BI	CACGAG	2 cut(s)	137, 1776
Bst2UI	CCWGG	1 cut(s)	2575
Bst4CI	ACNGT	4 cut(s)	386, 917, 1174, 1809
Bst6I	CTCTTC	5 cut(s)	7, 160, 1503, 1783, 2322
BstAFI	CTTAAG	1 cut(s)	1205
BstBAI	YACGTR	2 cut(s)	899, 1187
BstC8I	GCNNGC	9 cut(s)	47, 202, 538, 644, 648, 1365, 1893, 2094, 2601
BstDEI	CTNAG	9 cut(s)	224, 453, 651, 1092, 1179, 1229, 1368, 1480, 2406
BstDSI	CCRYGG	2 cut(s)	1022, 2527
BstENI	CCTNNNNNAGG	1 cut(s)	1327
BstF5I	GGATG	6 cut(s)	265, 389, 617, 704, 1200, 2129
BstH2I	RGCGCY	1 cut(s)	2524
BstHHI	GCGC	2 cut(s)	303, 2523
BstMAI	GTCTC	7 cut(s)	390, 666, 1088, 1468, 2011, 2246, 2298
BstMWI	GCNNNNNNNGC	7 cut(s)	210, 298, 1224, 2046, 2098, 2436, 2605
BstNI	CCWGG	1 cut(s)	2575
BstNSI	RCATGY	3 cut(s)	466, 2373, 2430
BstPAI	GACNNNNGTC	2 cut(s)	139, 366
BstSCI	CCNGG	2 cut(s)	144, 2573
BstSFI	CTRYAG	1 cut(s)	2300
BstSLI	GKGCMC	2 cut(s)	232, 1286
BstV1I	GCAGC	6 cut(s)	225, 1746, 2101, 2429, 2437, 2608
BstV2I	GAAGAC	1 cut(s)	2206
BstX2I	RGATCY	6 cut(s)	556, 574, 1063, 1240, 1319, 1399
BstYI	RGATCY	6 cut(s)	556, 574, 1063, 1240, 1319, 1399
Bsu15I	ATCGAT	1 cut(s)	120
BsuI	GTATCC	2 cut(s)	1452, 1787
BsuRI	GGCC	5 cut(s)	498, 1020, 1227, 2439, 2571
BsuTUI	ATCGAT	1 cut(s)	120
BtgI	CCRYGG	2 cut(s)	1022, 2527
BtgZI	GCGATG	1 cut(s)	1966
BtsCI	GGATG	6 cut(s)	265, 389, 617, 704, 1200, 2129
BtsI	GCAGTG	1 cut(s)	1083
BtsIMutI	CAGTG	8 cut(s)	232, 336, 427, 772, 865, 1083, 1170, 1560
BveI	ACCTGC	2 cut(s)	492, 2040
Cac8I	GCNNGC	9 cut(s)	47, 202, 538, 644, 648, 1365, 1893, 2094, 2601
CaiI	CAGNNNCTG	1 cut(s)	1979
CfoI	GCGC	2 cut(s)	303, 2523
Cfr13I	GGNCC	3 cut(s)	1019, 2438, 2570
ClaI	ATCGAT	1 cut(s)	120
CseI	GACGC	1 cut(s)	205
Csp6I	GTAC	3 cut(s)	1058, 1729, 2204
CviQI	GTAC	3 cut(s)	1058, 1729, 2204
DdeI	CTNAG	9 cut(s)	224, 453, 651, 1092, 1179, 1229, 1368, 1480, 2406
DraI	TTTAAA	1 cut(s)	2025
EaeI	YGGCCR	1 cut(s)	496
Eam1104I	CTCTTC	5 cut(s)	7, 160, 1503, 1783, 2322
EarI	CTCTTC	5 cut(s)	7, 160, 1503, 1783, 2322
EciI	GGCGGA	1 cut(s)	843
Eco130I	CCWWGG	3 cut(s)	1022, 2241, 2527
Eco24I	GRGCYC	2 cut(s)	194, 2660
Eco31I	GGTCTC	2 cut(s)	390, 2011
Eco32I	GATATC	2 cut(s)	118, 1335
Eco57I	CTGAAG	1 cut(s)	2346
Eco88I	CYCGRG	1 cut(s)	1485
EcoNI	CCTNNNNNAGG	1 cut(s)	1327
EcoO109I	RGGNCCY	1 cut(s)	2570
EcoRII	CCWGG	1 cut(s)	2573
EcoRV	GATATC	2 cut(s)	118, 1335
EcoT14I	CCWWGG	3 cut(s)	1022, 2241, 2527
EcoT22I	ATGCAT	2 cut(s)	1108, 2432
EcoT38I	GRGCYC	2 cut(s)	194, 2660
ErhI	CCWWGG	3 cut(s)	1022, 2241, 2527
FalI	AAGNNNNNCTT	2 cut(s)	2538, 2570
FaqI	GGGAC	3 cut(s)	127, 722, 1336
FbaI	TGATCA	1 cut(s)	511
FblI	GTMKAC	2 cut(s)	1677, 2461
Fnu4HI	GCNGC	7 cut(s)	214, 499, 1760, 2090, 2418, 2451, 2597
FokI	GGATG	6 cut(s)	272, 376, 624, 711, 1187, 2136
FriOI	GRGCYC	2 cut(s)	194, 2660
Fsp4HI	GCNGC	7 cut(s)	214, 499, 1760, 2090, 2418, 2451, 2597
FspBI	CTAG	9 cut(s)	273, 311, 647, 1296, 1697, 1877, 1965, 2093, 2270
GlaI	GCGC	2 cut(s)	302, 2522
GluI	GCNGC	7 cut(s)	214, 499, 1760, 2090, 2418, 2451, 2597
GsaI	CCCAGC	1 cut(s)	301
HaeII	RGCGCY	1 cut(s)	2524
HaeIII	GGCC	5 cut(s)	498, 1020, 1227, 2439, 2571
HapII	CCGG	3 cut(s)	146, 431, 1613
HgaI	GACGC	1 cut(s)	205
HhaI	GCGC	2 cut(s)	303, 2523
Hin6I	GCGC	2 cut(s)	301, 2521
HinP1I	GCGC	2 cut(s)	301, 2521
HincII	GTYRAC	5 cut(s)	361, 382, 2160, 2383, 2462
HindII	GTYRAC	5 cut(s)	361, 382, 2160, 2383, 2462
HindIII	AAGCTT	2 cut(s)	19, 2552
HpaI	GTTAAC	1 cut(s)	2383
HpaII	CCGG	3 cut(s)	146, 431, 1613
HphI	GGTGA	6 cut(s)	484, 521, 914, 1403, 2288, 2555
Hpy166II	GTNNAC	7 cut(s)	361, 382, 1394, 1678, 2160, 2383, 2462
Hpy8I	GTNNAC	7 cut(s)	361, 382, 1394, 1678, 2160, 2383, 2462
HpyAV	CCTTC	5 cut(s)	65, 96, 143, 1937, 2111
HpyCH4III	ACNGT	4 cut(s)	386, 917, 1174, 1809
HpyCH4IV	ACGT	3 cut(s)	721, 898, 1186
HpyF10VI	GCNNNNNNNGC	7 cut(s)	210, 298, 1224, 2046, 2098, 2436, 2605
HpyF3I	CTNAG	9 cut(s)	224, 453, 651, 1092, 1179, 1229, 1368, 1480, 2406
HpySE526I	ACGT	3 cut(s)	721, 898, 1186
HspAI	GCGC	2 cut(s)	301, 2521
Ksp22I	TGATCA	1 cut(s)	511
KspAI	GTTAAC	1 cut(s)	2383
LguI	GCTCTTC	1 cut(s)	160
LmnI	GCTCC	5 cut(s)	197, 1648, 1825, 2071, 2242
Lsp1109I	GCAGC	6 cut(s)	225, 1746, 2101, 2429, 2437, 2608
LweI	GCATC	6 cut(s)	602, 689, 1115, 1209, 1726, 2439
MaeI	CTAG	9 cut(s)	273, 311, 647, 1296, 1697, 1877, 1965, 2093, 2270
MaeII	ACGT	3 cut(s)	721, 898, 1186
MaeIII	GTNAC	6 cut(s)	442, 703, 755, 1872, 2352, 2422
MfeI	CAATTG	2 cut(s)	1815, 2034
MflI	RGATCY	6 cut(s)	556, 574, 1063, 1240, 1319, 1399
MhlI	GDGCHC	5 cut(s)	194, 232, 1286, 1830, 2660
MlyI	GAGTC	6 cut(s)	129, 1358, 1932, 1985, 2300, 2577
MmeI	TCCRAC	1 cut(s)	1469
Mph1103I	ATGCAT	2 cut(s)	1108, 2432
MroXI	GAANNNNTTC	3 cut(s)	916, 1769, 2331
MslI	CAYNNNNRTG	2 cut(s)	185, 258
MspA1I	CMGCKG	1 cut(s)	2420
MspCI	CTTAAG	1 cut(s)	1205
MspI	CCGG	3 cut(s)	146, 431, 1613
MspR9I	CCNGG	2 cut(s)	146, 2575
MunI	CAATTG	2 cut(s)	1815, 2034
Mva1269I	GAATGC	1 cut(s)	2505
MvaI	CCWGG	1 cut(s)	2575
MwoI	GCNNNNNNNGC	7 cut(s)	210, 298, 1224, 2046, 2098, 2436, 2605
NciI	CCSGG	1 cut(s)	146
NcoI	CCATGG	2 cut(s)	1022, 2527
NheI	GCTAGC	2 cut(s)	646, 2092
NlaIV	GGNNCC	8 cut(s)	193, 280, 429, 576, 1065, 1321, 1644, 2572
NmeAIII	GCCGAG	3 cut(s)	1385, 2137, 2665
NmuCI	GTSAC	2 cut(s)	442, 755
NsiI	ATGCAT	2 cut(s)	1108, 2432
NspI	RCATGY	3 cut(s)	466, 2373, 2430
OliI	CACNNNNGTG	1 cut(s)	185
PaeR7I	CTCGAG	1 cut(s)	1485
PasI	CCCWGGG	1 cut(s)	2574
PciI	ACATGT	1 cut(s)	462
PciSI	GCTCTTC	1 cut(s)	160
PctI	GAATGC	1 cut(s)	2505
PdmI	GAANNNNTTC	3 cut(s)	916, 1769, 2331
PfeI	GAWTC	7 cut(s)	109, 475, 605, 836, 1595, 1634, 2332
PkrI	GCNGC	7 cut(s)	215, 500, 1761, 2091, 2419, 2452, 2598
PleI	GAGTC	6 cut(s)	129, 1357, 1931, 1984, 2299, 2577
PpsI	GAGTC	6 cut(s)	129, 1357, 1931, 1984, 2299, 2577
Ppu21I	YACGTR	2 cut(s)	899, 1187
PscI	ACATGT	1 cut(s)	462
PshAI	GACNNNNGTC	2 cut(s)	139, 366
Psp1406I	AACGTT	1 cut(s)	721
Psp6I	CCWGG	1 cut(s)	2573
PspFI	CCCAGC	1 cut(s)	297
PspGI	CCWGG	1 cut(s)	2573
PspN4I	GGNNCC	8 cut(s)	193, 280, 429, 576, 1065, 1321, 1644, 2572
PspPI	GGNCC	3 cut(s)	1019, 2438, 2570
PstNI	CAGNNNCTG	1 cut(s)	1979
PsuI	RGATCY	6 cut(s)	556, 574, 1063, 1240, 1319, 1399
PvuII	CAGCTG	1 cut(s)	2420
RsaI	GTAC	3 cut(s)	1059, 1730, 2205
RsaNI	GTAC	3 cut(s)	1058, 1729, 2204
RseI	CAYNNNNRTG	2 cut(s)	185, 258
SalI	GTCGAC	1 cut(s)	2460
SapI	GCTCTTC	1 cut(s)	160
SatI	GCNGC	7 cut(s)	214, 499, 1760, 2090, 2418, 2451, 2597
Sau96I	GGNCC	3 cut(s)	1019, 2438, 2570
ScaI	AGTACT	1 cut(s)	1059
SchI	GAGTC	6 cut(s)	129, 1358, 1932, 1985, 2300, 2577
ScrFI	CCNGG	2 cut(s)	146, 2575
SduI	GDGCHC	5 cut(s)	194, 232, 1286, 1830, 2660
SfaNI	GCATC	6 cut(s)	602, 689, 1115, 1209, 1726, 2439
SfcI	CTRYAG	1 cut(s)	2300
Sfr274I	CTCGAG	1 cut(s)	1485
SlaI	CTCGAG	1 cut(s)	1485
SmiMI	CAYNNNNRTG	2 cut(s)	185, 258
SmlI	CTYRAG	5 cut(s)	22, 550, 1205, 1485, 1712
SmoI	CTYRAG	5 cut(s)	22, 550, 1205, 1485, 1712
SsiI	CCGC	5 cut(s)	499, 854, 1346, 2079, 2218
SspI	AATATT	1 cut(s)	2105
SspMI	CTAG	9 cut(s)	273, 311, 647, 1296, 1697, 1877, 1965, 2093, 2270
StyD4I	CCNGG	2 cut(s)	144, 2573
StyI	CCWWGG	3 cut(s)	1022, 2241, 2527
TaaI	ACNGT	4 cut(s)	386, 917, 1174, 1809
TaiI	ACGT	3 cut(s)	724, 901, 1189
TaqI	TCGA	6 cut(s)	120, 335, 1486, 2289, 2374, 2461
TatI	WGTACW	1 cut(s)	1057
TauI	GCSGC	1 cut(s)	501
TfiI	GAWTC	7 cut(s)	109, 475, 605, 836, 1595, 1634, 2332
TscAI	CASTG	8 cut(s)	232, 336, 427, 772, 865, 1083, 1177, 1567
TseFI	GTSAC	2 cut(s)	442, 755
TseI	GCWGC	6 cut(s)	213, 1759, 2089, 2417, 2450, 2596
Tsp45I	GTSAC	2 cut(s)	442, 755
TspGWI	ACGGA	3 cut(s)	184, 1027, 1566
TspRI	CASTG	8 cut(s)	232, 336, 427, 772, 865, 1083, 1177, 1567
Vha464I	CTTAAG	1 cut(s)	1205
XagI	CCTNNNNNAGG	1 cut(s)	1327
XapI	RAATTY	7 cut(s)	338, 346, 688, 946, 1473, 1701, 2307
XbaI	TCTAGA	2 cut(s)	272, 310
XceI	RCATGY	3 cut(s)	466, 2373, 2430
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1950
XhoI	CTCGAG	1 cut(s)	1485
XmiI	GTMKAC	2 cut(s)	1677, 2461
XmnI	GAANNNNTTC	3 cut(s)	916, 1769, 2331
XspI	CTAG	9 cut(s)	273, 311, 647, 1296, 1697, 1877, 1965, 2093, 2270
ZrmI	AGTACT	1 cut(s)	1059
Zsp2I	ATGCAT	2 cut(s)	1108, 2432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.