Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002599

Physical Location & Seq

Genomic Coordinates Reverse (-)

16887784 .. 16893857

Gene Structure 6074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G186000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1110 bp

ATGATGATGTTCAAAGAGTTTTGGGTAAAGAAGACATTGGTAGGTCTCGGGTTGGGCCAATTTCTCTCGCTTTTGATCACTTCCACTGGCTTTTCATCCTCTGAGCTAGCCAAAAAAGGAATTAAGGCACCTACTTCGCAGTCTTTTCTGAACTATGTGCTCTTGGCAATTGTCTATGGAGCTATAATGCTTTACCGAAGGAAACCACTTAAGGCTAAATGGTATTACTATGTGCTTCTGGGAATGGTAGATGTGGAGGCCAATTTTCTAGTGGTGAAGGCTTATCAATATACATCTATAACAAGTGTAATGCTGCTGGATTGTTGGTCTATCCCATCCGTTATGCTTCTTACGTGGGTTTTCTTAAAAACAAAATATAGATTTAGAAAGATAACCGGGGTGGTGGTTTGTGTTGCTGGCCTTGTCATGGTTGTTTTTTCAGATGTTCATGCAGGTGACCAAGCAGGAGGGAGCAACCCCCGTTTAGGAGATGTACTAGTAATTGCTGGTTCTACGCTCTATGCTGTTAGTAATGTCAGTGAGGAGTTTCTAGTAAAGAATGCCGACAGAGTTGAACTCATGGCCATGCTGGGCTTTTTTGGTGCCATTGTCAGTGCTATCCAAATAAGCATACTGGAGCGCAATGAGCTCAAATCCATTCACTGGTCAGCTGGGGCTGCACTTCCTTTTGTTGGATTTTCAGTGGCCATGTTCCTGTTTTACTCATTTGTCCCAGTCTTACTAAAGACTAATGGGTCCACAATGTTAAACCTCTCATTGCTGACCTCAGACATGTGGGCAGTCTTAATTCGCATTTTTGCTTACCATGAGAAGGTTGATTGGATGTACTTTGTGGCCTTCGCTGGTGTTTGTGTTGGGCTTGTTATTTATTCAGGGGGTGACAAAGAAGAGGATCAACAGCGTGCTGATGTTGCGGATGAAGGTGCAGAGCGAAGTAAACATTTTGACGAGGAAGCTGCTTCAGTAAGTCGAGGAACAACAGTGGCCGGGAGCTCAAAAACAGGGGATAGCAGCAAGCATGAGATTACAGAAGGAGAAGTCTTTGACAACAAGAGCGTAGGAAAAGATGTTCAAGGGAGGAAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SLC35F

Protein Analysis

370

Amino Acids

40.64

Weight (kDa)

8.24

Isoelectric Point (pI)

19.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59310 AT3G59310 AT3G59310 AT3G59320 AT3G59320 AT3G59340 AT3G59340 AT3G59340 AT3G59340
fragaria_vesca	FvH4_4g11520 FvH4_6g18390
malus_domestica	MD04G1036800.v1.1 MD14G1020100.v1.1
prunus_persica	Prupe.1G186000_v2.0.a1 Prupe.7G113500_v2.0.a1
pyrus_communis	pycom04g02990 pycom14g01970
rosa_chinensis	RchiOBHm_Chr3g0472881 RchiOBHm_Chr4g0408431
rosa_laevigata	RLG00000008651 RLG00000024049
rosa_multiflora	Rmu_co8481489.1_g000001 Rmu_sc0000787.1_g000011
rosa_roxburghii	Rroxscaffold_5G00352900 Rroxscaffold_6G00408510
rosa_rugosa	Rorug03G0128900 Rorug03G0129000 Rorug03G0129100 Rorug04G0085800 Rorug04G0085900
rosa_samantha	Rh3AG181100 Rh3BG207300 Rh3CG204500 Rh3DG168500 Rh4AG150500 Rh4BG147800 Rh4CG157800 Rh4DG143400
rosa_wichuraiana	Rw3G016200 Rw4G012290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	443
AasI	GACNNNNNNGTC	1 cut(s)	754
Acc36I	ACCTGC	1 cut(s)	443
AccB1I	GGYRCC	2 cut(s)	127, 602
AccB7I	CCANNNNNTGG	1 cut(s)	663
AciI	CCGC	1 cut(s)	935
AclWI	GGATC	1 cut(s)	921
AcoI	YGGCCR	3 cut(s)	582, 705, 1005
AcuI	CTGAAG	1 cut(s)	966
AfaI	GTAC	2 cut(s)	495, 848
AfiI	CCNNNNNNNGG	5 cut(s)	427, 485, 663, 692, 832
AflII	CTTAAG	1 cut(s)	209
AflIII	ACRYGT	1 cut(s)	792
AgsI	TTSAA	3 cut(s)	13, 575, 1094
AhlI	ACTAGT	1 cut(s)	496
AloI	GAACNNNNNNTCC	2 cut(s)	1074, 1106
AluBI	AGCT	6 cut(s)	106, 182, 649, 671, 977, 1014
AluI	AGCT	6 cut(s)	106, 182, 649, 671, 977, 1014
Alw21I	GWGCWC	3 cut(s)	162, 651, 1016
Alw26I	GTCTC	1 cut(s)	50
AlwI	GGATC	1 cut(s)	921
Ama87I	CYCGRG	1 cut(s)	47
AoxI	GGCC	7 cut(s)	55, 258, 418, 582, 705, 855, 1005
ApeKI	GCWGC	4 cut(s)	313, 677, 977, 1032
AspLEI	GCGC	1 cut(s)	642
AspS9I	GGNCC	2 cut(s)	55, 756
AsuC2I	CCSGG	2 cut(s)	397, 1009
AsuHPI	GGTGA	3 cut(s)	286, 467, 911
AsuNHI	GCTAGC	1 cut(s)	106
AvaI	CYCGRG	1 cut(s)	47
AvaII	GGWCC	1 cut(s)	756
BalI	TGGCCA	2 cut(s)	584, 707
BanI	GGYRCC	2 cut(s)	127, 602
BanII	GRGCYC	2 cut(s)	651, 1016
BbsI	GAAGAC	1 cut(s)	38
Bbv12I	GWGCWC	3 cut(s)	162, 651, 1016
BbvI	GCAGC	4 cut(s)	300, 664, 964, 1044
BccI	CCATC	1 cut(s)	343
BcgI	CGANNNNNNTGC	4 cut(s)	117, 151, 959, 993
BclI	TGATCA	1 cut(s)	75
BcnI	CCSGG	2 cut(s)	397, 1009
BcoDI	GTCTC	1 cut(s)	50
BcuI	ACTAGT	1 cut(s)	496
BfaI	CTAG	4 cut(s)	107, 269, 497, 551
BfrI	CTTAAG	1 cut(s)	209
BfuAI	ACCTGC	1 cut(s)	443
BisI	GCNGC	4 cut(s)	314, 678, 978, 1033
BlsI	GCNGC	4 cut(s)	315, 679, 979, 1034
Bme1390I	CCNGG	2 cut(s)	397, 1009
Bme18I	GGWCC	1 cut(s)	756
BmeT110I	CYCGRG	1 cut(s)	47
BmgT120I	GGNCC	2 cut(s)	55, 756
BmiI	GGNNCC	3 cut(s)	129, 604, 757
BmrFI	CCNGG	2 cut(s)	397, 1009
BmrI	ACTGGG	1 cut(s)	728
BmtI	GCTAGC	1 cut(s)	110
BmuI	ACTGGG	1 cut(s)	728
BpiI	GAAGAC	1 cut(s)	38
BplI	GAGNNNNNCTC	2 cut(s)	561, 593
BpmI	CTGGAG	1 cut(s)	656
BpuMI	CCSGG	2 cut(s)	397, 1009
BsaAI	YACGTR	1 cut(s)	354
BsaI	GGTCTC	1 cut(s)	50
BsaJI	CCNNGG	1 cut(s)	396
Bsc4I	CCNNNNNNNGG	5 cut(s)	427, 485, 663, 692, 832
Bse1I	ACTGG	4 cut(s)	91, 639, 668, 734
Bse3DI	GCAATG	2 cut(s)	649, 776
BseDI	CCNNGG	1 cut(s)	396
BseGI	GGATG	4 cut(s)	95, 335, 849, 943
BseLI	CCNNNNNNNGG	5 cut(s)	427, 485, 663, 692, 832
BseMI	GCAATG	2 cut(s)	649, 776
BseMII	CTCAG	2 cut(s)	93, 801
BseNI	ACTGG	4 cut(s)	91, 639, 668, 734
BseRI	GAGGAG	1 cut(s)	557
BseXI	GCAGC	4 cut(s)	300, 664, 964, 1044
BseYI	CCCAGC	2 cut(s)	589, 671
BsgI	GTGCAG	2 cut(s)	663, 966
BshFI	GGCC	7 cut(s)	57, 260, 420, 584, 707, 857, 1007
BshNI	GGYRCC	2 cut(s)	127, 602
BsiHKAI	GWGCWC	3 cut(s)	162, 651, 1016
BsiHKCI	CYCGRG	1 cut(s)	47
BsiSI	CCGG	2 cut(s)	396, 1008
BslFI	GGGAC	1 cut(s)	716
BslI	CCNNNNNNNGG	5 cut(s)	427, 485, 663, 692, 832
BsmAI	GTCTC	1 cut(s)	50
BsmFI	GGGAC	1 cut(s)	716
BsmI	GAATGC	1 cut(s)	565
BsnI	GGCC	7 cut(s)	57, 260, 420, 584, 707, 857, 1007
Bso31I	GGTCTC	1 cut(s)	50
BsoBI	CYCGRG	1 cut(s)	47
Bsp1286I	GDGCHC	3 cut(s)	162, 651, 1016
Bsp143I	GATC	2 cut(s)	75, 913
BspACI	CCGC	1 cut(s)	935
BspANI	GGCC	7 cut(s)	57, 260, 420, 584, 707, 857, 1007
BspCNI	CTCAG	2 cut(s)	94, 800
BspHI	TCATGA	1 cut(s)	1106
BspLI	GGNNCC	3 cut(s)	129, 604, 757
BspMI	ACCTGC	1 cut(s)	443
BspOI	GCTAGC	1 cut(s)	110
BspPI	GGATC	1 cut(s)	921
BspT107I	GGYRCC	2 cut(s)	127, 602
BspTI	CTTAAG	1 cut(s)	209
BspTNI	GGTCTC	1 cut(s)	50
BsrDI	GCAATG	2 cut(s)	649, 776
BsrI	ACTGG	4 cut(s)	91, 639, 668, 734
BssECI	CCNNGG	1 cut(s)	396
BssMI	GATC	2 cut(s)	75, 913
Bst4CI	ACNGT	1 cut(s)	1003
Bst6I	CTCTTC	1 cut(s)	903
BstAFI	CTTAAG	1 cut(s)	209
BstBAI	YACGTR	1 cut(s)	354
BstC8I	GCNNGC	4 cut(s)	108, 418, 924, 1037
BstDEI	CTNAG	2 cut(s)	102, 787
BstEII	GGTNACC	1 cut(s)	455
BstF5I	GGATG	4 cut(s)	95, 335, 849, 943
BstHHI	GCGC	1 cut(s)	642
BstKTI	GATC	2 cut(s)	78, 916
BstMAI	GTCTC	1 cut(s)	50
BstMBI	GATC	2 cut(s)	75, 913
BstMWI	GCNNNNNNNGC	3 cut(s)	646, 677, 932
BstNSI	RCATGY	1 cut(s)	796
BstPI	GGTNACC	1 cut(s)	455
BstSCI	CCNGG	2 cut(s)	395, 1007
BstV1I	GCAGC	4 cut(s)	300, 664, 964, 1044
BstV2I	GAAGAC	1 cut(s)	38
BsuRI	GGCC	7 cut(s)	57, 260, 420, 584, 707, 857, 1007
BtsCI	GGATG	4 cut(s)	95, 335, 849, 943
BtsIMutI	CAGTG	6 cut(s)	84, 544, 619, 661, 708, 1008
BveI	ACCTGC	1 cut(s)	443
Cac8I	GCNNGC	4 cut(s)	108, 418, 924, 1037
CciI	TCATGA	1 cut(s)	1106
CfoI	GCGC	1 cut(s)	642
Cfr13I	GGNCC	2 cut(s)	55, 756
Csp6I	GTAC	2 cut(s)	494, 847
CviAII	CATG	9 cut(s)	427, 449, 580, 586, 709, 793, 827, 1040, 1107
CviQI	GTAC	2 cut(s)	494, 847
DdeI	CTNAG	2 cut(s)	102, 787
DpnI	GATC	2 cut(s)	77, 915
DpnII	GATC	2 cut(s)	75, 913
DrdI	GACNNNNNNGTC	1 cut(s)	754
DseDI	GACNNNNNNGTC	1 cut(s)	754
EaeI	YGGCCR	3 cut(s)	582, 705, 1005
Eam1104I	CTCTTC	1 cut(s)	903
EarI	CTCTTC	1 cut(s)	903
Ecl136II	GAGCTC	2 cut(s)	649, 1014
Eco24I	GRGCYC	2 cut(s)	651, 1016
Eco31I	GGTCTC	1 cut(s)	50
Eco47I	GGWCC	1 cut(s)	756
Eco53kI	GAGCTC	2 cut(s)	649, 1014
Eco57I	CTGAAG	1 cut(s)	966
Eco88I	CYCGRG	1 cut(s)	47
Eco91I	GGTNACC	1 cut(s)	455
EcoICRI	GAGCTC	2 cut(s)	649, 1014
EcoO65I	GGTNACC	1 cut(s)	455
EcoT38I	GRGCYC	2 cut(s)	651, 1016
FaeI	CATG	9 cut(s)	430, 452, 583, 589, 712, 796, 830, 1043, 1110
FaqI	GGGAC	1 cut(s)	716
FatI	CATG	9 cut(s)	426, 448, 579, 585, 708, 792, 826, 1039, 1106
FbaI	TGATCA	1 cut(s)	75
Fnu4HI	GCNGC	4 cut(s)	314, 678, 978, 1033
FokI	GGATG	4 cut(s)	82, 322, 856, 950
FriOI	GRGCYC	2 cut(s)	651, 1016
Fsp4HI	GCNGC	4 cut(s)	314, 678, 978, 1033
FspBI	CTAG	4 cut(s)	107, 269, 497, 551
GlaI	GCGC	1 cut(s)	641
GluI	GCNGC	4 cut(s)	314, 678, 978, 1033
GsaI	CCCAGC	2 cut(s)	593, 675
GsuI	CTGGAG	1 cut(s)	656
HaeIII	GGCC	7 cut(s)	57, 260, 420, 584, 707, 857, 1007
HapII	CCGG	2 cut(s)	396, 1008
HhaI	GCGC	1 cut(s)	642
Hin1II	CATG	9 cut(s)	430, 452, 583, 589, 712, 796, 830, 1043, 1110
Hin6I	GCGC	1 cut(s)	640
HinP1I	GCGC	1 cut(s)	640
HpaII	CCGG	2 cut(s)	396, 1008
HphI	GGTGA	3 cut(s)	286, 467, 911
Hpy166II	GTNNAC	2 cut(s)	759, 959
Hpy188I	TCNGA	4 cut(s)	103, 150, 442, 790
Hpy188III	TCNNGA	1 cut(s)	1107
Hpy8I	GTNNAC	2 cut(s)	759, 959
HpyAV	CCTTC	6 cut(s)	192, 271, 826, 868, 935, 1046
HpyCH4III	ACNGT	1 cut(s)	1003
HpyCH4IV	ACGT	1 cut(s)	353
HpyCH4V	TGCA	3 cut(s)	452, 680, 947
HpyF10VI	GCNNNNNNNGC	3 cut(s)	646, 677, 932
HpyF3I	CTNAG	2 cut(s)	102, 787
HpySE526I	ACGT	1 cut(s)	353
Hsp92II	CATG	9 cut(s)	430, 452, 583, 589, 712, 796, 830, 1043, 1110
HspAI	GCGC	1 cut(s)	640
Ksp22I	TGATCA	1 cut(s)	75
Kzo9I	GATC	2 cut(s)	75, 913
LmnI	GCTCC	4 cut(s)	179, 471, 637, 1011
Lsp1109I	GCAGC	4 cut(s)	300, 664, 964, 1044
MaeI	CTAG	4 cut(s)	107, 269, 497, 551
MaeII	ACGT	1 cut(s)	353
MaeIII	GTNAC	2 cut(s)	455, 899
MalI	GATC	2 cut(s)	77, 915
MboI	GATC	2 cut(s)	75, 913
MboII	GAAGA	2 cut(s)	43, 920
MfeI	CAATTG	1 cut(s)	168
MhlI	GDGCHC	3 cut(s)	162, 651, 1016
MlsI	TGGCCA	2 cut(s)	584, 707
MluCI	AATT	6 cut(s)	59, 120, 168, 262, 501, 807
MluNI	TGGCCA	2 cut(s)	584, 707
MmeI	TCCRAC	1 cut(s)	673
Mox20I	TGGCCA	2 cut(s)	584, 707
MscI	TGGCCA	2 cut(s)	584, 707
MseI	TTAA	5 cut(s)	123, 210, 365, 767, 806
MslI	CAYNNNNRTG	2 cut(s)	453, 584
Msp20I	TGGCCA	2 cut(s)	584, 707
MspA1I	CMGCKG	1 cut(s)	671
MspCI	CTTAAG	1 cut(s)	209
MspI	CCGG	2 cut(s)	396, 1008
MspR9I	CCNGG	2 cut(s)	397, 1009
MunI	CAATTG	1 cut(s)	168
Mva1269I	GAATGC	1 cut(s)	565
MwoI	GCNNNNNNNGC	3 cut(s)	646, 677, 932
NciI	CCSGG	2 cut(s)	397, 1009
NdeII	GATC	2 cut(s)	75, 913
NheI	GCTAGC	1 cut(s)	106
NlaIII	CATG	9 cut(s)	430, 452, 583, 589, 712, 796, 830, 1043, 1110
NlaIV	GGNNCC	3 cut(s)	129, 604, 757
NmuCI	GTSAC	2 cut(s)	455, 899
NspI	RCATGY	1 cut(s)	796
PagI	TCATGA	1 cut(s)	1106
PaqCI	CACCTGC	1 cut(s)	443
PciI	ACATGT	1 cut(s)	792
PctI	GAATGC	1 cut(s)	565
PflMI	CCANNNNNTGG	1 cut(s)	663
PkrI	GCNGC	4 cut(s)	315, 679, 979, 1034
Ppu21I	YACGTR	1 cut(s)	354
PscI	ACATGT	1 cut(s)	792
Psp124BI	GAGCTC	2 cut(s)	651, 1016
PspEI	GGTNACC	1 cut(s)	455
PspFI	CCCAGC	2 cut(s)	589, 671
PspN4I	GGNNCC	3 cut(s)	129, 604, 757
PspPI	GGNCC	2 cut(s)	55, 756
PvuII	CAGCTG	1 cut(s)	671
RsaI	GTAC	2 cut(s)	495, 848
RsaNI	GTAC	2 cut(s)	494, 847
RseI	CAYNNNNRTG	2 cut(s)	453, 584
SacI	GAGCTC	2 cut(s)	651, 1016
SaqAI	TTAA	5 cut(s)	123, 210, 365, 767, 806
SatI	GCNGC	4 cut(s)	314, 678, 978, 1033
Sau3AI	GATC	2 cut(s)	75, 913
Sau96I	GGNCC	2 cut(s)	55, 756
ScrFI	CCNGG	2 cut(s)	397, 1009
SduI	GDGCHC	3 cut(s)	162, 651, 1016
SinI	GGWCC	1 cut(s)	756
SmiMI	CAYNNNNRTG	2 cut(s)	453, 584
SmlI	CTYRAG	1 cut(s)	209
SmoI	CTYRAG	1 cut(s)	209
SpeI	ACTAGT	1 cut(s)	496
Sse9I	AATT	6 cut(s)	59, 120, 168, 262, 501, 807
SsiI	CCGC	1 cut(s)	935
SspMI	CTAG	4 cut(s)	107, 269, 497, 551
SstI	GAGCTC	2 cut(s)	651, 1016
StyD4I	CCNGG	2 cut(s)	395, 1007
TaaI	ACNGT	1 cut(s)	1003
TaiI	ACGT	1 cut(s)	356
TaqI	TCGA	1 cut(s)	991
TasI	AATT	6 cut(s)	59, 120, 168, 262, 501, 807
TatI	WGTACW	2 cut(s)	493, 846
Tru1I	TTAA	5 cut(s)	123, 210, 365, 767, 806
Tru9I	TTAA	5 cut(s)	123, 210, 365, 767, 806
TscAI	CASTG	6 cut(s)	91, 544, 619, 668, 708, 1008
TseFI	GTSAC	2 cut(s)	455, 899
TseI	GCWGC	4 cut(s)	313, 677, 977, 1032
Tsp45I	GTSAC	2 cut(s)	455, 899
TspDTI	ATGAA	3 cut(s)	84, 437, 954
TspGWI	ACGGA	1 cut(s)	328
TspRI	CASTG	6 cut(s)	91, 544, 619, 668, 708, 1008
Van91I	CCANNNNNTGG	1 cut(s)	663
Vha464I	CTTAAG	1 cut(s)	209
VpaK11BI	GGWCC	1 cut(s)	756
XceI	RCATGY	1 cut(s)	796
XcmI	CCANNNNNNNNNTGG	1 cut(s)	268
XspI	CTAG	4 cut(s)	107, 269, 497, 551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.