Rh3BG207300

Solute carrier family 35

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0002599
Physical Location & Seq
Reverse (-)
18622010 .. 18626450
4441 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG207300.1

Sequence Viewer

Length: 1020 bp
ATGAGCTTCTTGACATCATCCGCCTGGTGGAGAAGCCATGTCAACTTGCGAACGCTGTACATGTTGTTCCTGGGTCAGCTCCTCTCCTTCTTTCTCGCACTCATGAGCTTCACTTCATCTCTCATAGCCAATCTCGGTGTGGATACGCCGATTACACAGACCTTGTTCACTTACTTGCTTTTGGCTTTGGTTTATGGAGGAATCTTGCTGCATAGGCGTGAGAAATTACGGGTTTCTTGGTATTGGTATCTTCTCTTGGGGTTTGTGGATGTTCAAGGGAACTATCTTGTAAATGAAGCATATCAGTTCTCATCAATAACTAGTGTGACATTATTGGACTGTTTTACAATCGCTTGGGTGCTAATTCTCACATGGATCTTCCTCGGCACTCGATATTCCATATGGCAATTGTTTGGTGCAGCCCTCTGTGTGGTTGGGCTTGGCATAGTGCTCCTCTCTGATGCAGGGGTAGCTGGTGGAGGTGGTTCACAACCTCTTCTTGGAGATGTCCTGGTCATAGCAGGAACAATTTTCTTTGCACTGAGCAATGTTGGTGAGGAGTTTTGTGTGAAGAAAAGAGATCGTATTGAAGTAGTATGCATGATTGGTGTATTTGGATTTCTAGTGAGTGTGTGTCAGATATCCATTCTGGAATTAAAGAGTTTGGAATCAGTGGAGTGGTCTACAGATCTTATATTGGCCTTTGTTGGCTATGGATTGGCAGGCTTTATGCTGTACACACTTGGTCCATTCGTTCTTCAGATGAGTGGAGCCACATTGTTCAATCTCTCTATTCTCACATCTGATATGTGGGCTGTGGTTGTTCGCATCTTTATCTACCACCAGGAGGTAGACTGGTTATACTATTTATCATTTGCAATTGTAGTTATCGGACTCATCATTTATTCAGTAACGGAAAAGGAACCTGATCCTGTAACTTCACCTGAGGATGGAAACCCCAGCTACCAAATTCTTGAAGATGAAAGTGCTACATCTAGAAATGAGTCTTTGGCCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SLC35F

Protein Analysis

339

Amino Acids

37.72

Weight (kDa)

4.59

Isoelectric Point (pI)

30.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SLC35F PF06027 16 - 304 1.6e-95 Solute carrier family 35
EamA PF00892 23 - 151 6.9e-10 EamA-like transporter family
UAA PF08449 71 - 155 3.1e-06 UAA transporter family
CRT-like PF08627 72 - 236 1.1e-09 CRT-like, chloroquine-resistance transporter-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 683, 852
AciI CCGC 1 cut(s) 21
AclWI GGATC 2 cut(s) 383, 923
AcsI RAATTY 1 cut(s) 969
AcuI CTGAAG 1 cut(s) 743
AfaI GTAC 2 cut(s) 59, 737
AfiI CCNNNNNNNGG 5 cut(s) 27, 430, 500, 847, 950
AflIII ACRYGT 1 cut(s) 60
AgsI TTSAA 4 cut(s) 275, 590, 784, 977
AhlI ACTAGT 1 cut(s) 320
AjnI CCWGG 4 cut(s) 23, 69, 510, 843
AluBI AGCT 5 cut(s) 6, 79, 108, 473, 963
AluI AGCT 5 cut(s) 6, 79, 108, 473, 963
Alw21I GWGCWC 1 cut(s) 453
AlwI GGATC 2 cut(s) 383, 923
AoxI GGCC 2 cut(s) 699, 1011
ApeKI GCWGC 2 cut(s) 208, 419
ApoI RAATTY 1 cut(s) 969
AspS9I GGNCC 1 cut(s) 746
AsuHPI GGTGA 2 cut(s) 566, 933
AvaII GGWCC 1 cut(s) 746
AxyI CCTNAGG 1 cut(s) 945
Bbv12I GWGCWC 1 cut(s) 453
BbvI GCAGC 2 cut(s) 195, 431
BccI CCATC 1 cut(s) 944
BciT130I CCWGG 4 cut(s) 25, 71, 512, 845
BciVI GTATCC 1 cut(s) 136
BcuI ACTAGT 1 cut(s) 320
BfaI CTAG 3 cut(s) 321, 623, 996
BfmI CTRYAG 1 cut(s) 684
BfuI GTATCC 1 cut(s) 136
BglII AGATCT 1 cut(s) 688
BisI GCNGC 2 cut(s) 209, 420
BlsI GCNGC 2 cut(s) 210, 421
Bme1390I CCNGG 4 cut(s) 25, 71, 512, 845
Bme18I GGWCC 1 cut(s) 746
BmgT120I GGNCC 1 cut(s) 746
BmiI GGNNCC 2 cut(s) 772, 924
BmrFI CCNGG 4 cut(s) 25, 71, 512, 845
BmsI GCATC 2 cut(s) 451, 837
BsaJI CCNNGG 2 cut(s) 70, 382
Bsc4I CCNNNNNNNGG 5 cut(s) 27, 430, 500, 847, 950
Bse1I ACTGG 1 cut(s) 860
Bse21I CCTNAGG 1 cut(s) 945
Bse3DI GCAATG 1 cut(s) 553
BseBI CCWGG 4 cut(s) 25, 71, 512, 845
BseDI CCNNGG 2 cut(s) 70, 382
BseGI GGATG 3 cut(s) 17, 274, 955
BseLI CCNNNNNNNGG 5 cut(s) 27, 430, 500, 847, 950
BseMI GCAATG 1 cut(s) 553
BseMII CTCAG 2 cut(s) 533, 936
BseNI ACTGG 1 cut(s) 860
BseRI GAGGAG 3 cut(s) 71, 443, 572
BseXI GCAGC 2 cut(s) 195, 431
BseYI CCCAGC 1 cut(s) 959
BsgI GTGCAG 1 cut(s) 438
BshFI GGCC 2 cut(s) 701, 1013
BsiHKAI GWGCWC 1 cut(s) 453
BslI CCNNNNNNNGG 5 cut(s) 27, 430, 500, 847, 950
BsnI GGCC 2 cut(s) 701, 1013
Bsp1286I GDGCHC 1 cut(s) 453
Bsp1407I TGTACA 2 cut(s) 57, 735
Bsp143I GATC 4 cut(s) 375, 580, 688, 928
BspACI CCGC 1 cut(s) 21
BspANI GGCC 2 cut(s) 701, 1013
BspCNI CTCAG 2 cut(s) 534, 937
BspHI TCATGA 2 cut(s) 102, 1016
BspLI GGNNCC 2 cut(s) 772, 924
BspPI GGATC 2 cut(s) 383, 923
BsrDI GCAATG 1 cut(s) 553
BsrGI TGTACA 2 cut(s) 57, 735
BsrI ACTGG 1 cut(s) 860
BssECI CCNNGG 2 cut(s) 70, 382
BssMI GATC 4 cut(s) 375, 580, 688, 928
Bst2UI CCWGG 4 cut(s) 25, 71, 512, 845
Bst4CI ACNGT 1 cut(s) 341
Bst6I CTCTTC 1 cut(s) 501
BstAUI TGTACA 2 cut(s) 57, 735
BstC8I GCNNGC 1 cut(s) 724
BstDEI CTNAG 2 cut(s) 542, 945
BstF5I GGATG 3 cut(s) 17, 274, 955
BstKTI GATC 4 cut(s) 378, 583, 691, 931
BstMBI GATC 4 cut(s) 375, 580, 688, 928
BstMWI GCNNNNNNNGC 2 cut(s) 214, 470
BstNI CCWGG 4 cut(s) 25, 71, 512, 845
BstNSI RCATGY 1 cut(s) 64
BstSCI CCNGG 4 cut(s) 23, 69, 510, 843
BstSFI CTRYAG 1 cut(s) 684
BstV1I GCAGC 2 cut(s) 195, 431
BstX2I RGATCY 2 cut(s) 375, 688
BstYI RGATCY 2 cut(s) 375, 688
Bsu36I CCTNAGG 1 cut(s) 945
BsuI GTATCC 1 cut(s) 136
BsuRI GGCC 2 cut(s) 701, 1013
BtsCI GGATG 3 cut(s) 17, 274, 955
BtsIMutI CAGTG 2 cut(s) 539, 678
Cac8I GCNNGC 1 cut(s) 724
CciI TCATGA 2 cut(s) 102, 1016
Cfr13I GGNCC 1 cut(s) 746
Csp6I GTAC 2 cut(s) 58, 736
CviAII CATG 6 cut(s) 38, 61, 103, 372, 601, 1017
CviQI GTAC 2 cut(s) 58, 736
DdeI CTNAG 2 cut(s) 542, 945
DpnI GATC 4 cut(s) 377, 582, 690, 930
DpnII GATC 4 cut(s) 375, 580, 688, 928
Eam1104I CTCTTC 1 cut(s) 501
EarI CTCTTC 1 cut(s) 501
EciI GGCGGA 1 cut(s) 10
Eco32I GATATC 1 cut(s) 642
Eco47I GGWCC 1 cut(s) 746
Eco57I CTGAAG 1 cut(s) 743
Eco81I CCTNAGG 1 cut(s) 945
EcoRII CCWGG 4 cut(s) 23, 69, 510, 843
EcoRV GATATC 1 cut(s) 642
EcoT22I ATGCAT 1 cut(s) 602
FaeI CATG 6 cut(s) 41, 64, 106, 375, 604, 1020
FatI CATG 6 cut(s) 37, 60, 102, 371, 600, 1016
FauNDI CATATG 1 cut(s) 401
FblI GTMKAC 2 cut(s) 683, 852
Fnu4HI GCNGC 2 cut(s) 209, 420
FokI GGATG 3 cut(s) 4, 281, 962
Fsp4HI GCNGC 2 cut(s) 209, 420
FspBI CTAG 3 cut(s) 321, 623, 996
GluI GCNGC 2 cut(s) 209, 420
GsaI CCCAGC 1 cut(s) 963
HaeIII GGCC 2 cut(s) 701, 1013
Hin1II CATG 6 cut(s) 41, 64, 106, 375, 604, 1020
HincII GTYRAC 1 cut(s) 43
HindII GTYRAC 1 cut(s) 43
HinfI GANTC 4 cut(s) 201, 668, 894, 1004
HphI GGTGA 2 cut(s) 566, 933
Hpy166II GTNNAC 6 cut(s) 43, 168, 488, 684, 738, 853
Hpy188I TCNGA 5 cut(s) 460, 639, 762, 805, 893
Hpy188III TCNNGA 6 cut(s) 10, 103, 650, 974, 996, 1017
Hpy8I GTNNAC 6 cut(s) 43, 168, 488, 684, 738, 853
HpyAV CCTTC 1 cut(s) 97
HpyCH4III ACNGT 1 cut(s) 341
HpyCH4V TGCA 6 cut(s) 211, 419, 464, 539, 600, 878
HpyF10VI GCNNNNNNNGC 2 cut(s) 214, 470
HpyF3I CTNAG 2 cut(s) 542, 945
Hsp92II CATG 6 cut(s) 41, 64, 106, 375, 604, 1020
Kzo9I GATC 4 cut(s) 375, 580, 688, 928
LmnI GCTCC 3 cut(s) 84, 456, 770
Lsp1109I GCAGC 2 cut(s) 195, 431
LweI GCATC 2 cut(s) 451, 837
MaeI CTAG 3 cut(s) 321, 623, 996
MaeIII GTNAC 3 cut(s) 325, 910, 934
MalI GATC 4 cut(s) 377, 582, 690, 930
MboI GATC 4 cut(s) 375, 580, 688, 928
MboII GAAGA 6 cut(s) 242, 370, 488, 583, 749, 989
MfeI CAATTG 2 cut(s) 407, 879
MflI RGATCY 2 cut(s) 375, 688
MhlI GDGCHC 1 cut(s) 453
MluCI AATT 7 cut(s) 224, 363, 407, 528, 653, 879, 969
MlyI GAGTC 2 cut(s) 888, 1013
Mph1103I ATGCAT 1 cut(s) 602
MseI TTAA 1 cut(s) 656
MslI CAYNNNNRTG 1 cut(s) 216
MspR9I CCNGG 4 cut(s) 25, 71, 512, 845
MunI CAATTG 2 cut(s) 407, 879
MvaI CCWGG 4 cut(s) 25, 71, 512, 845
MwoI GCNNNNNNNGC 2 cut(s) 214, 470
NdeI CATATG 1 cut(s) 401
NdeII GATC 4 cut(s) 375, 580, 688, 928
NlaIII CATG 6 cut(s) 41, 64, 106, 375, 604, 1020
NlaIV GGNNCC 2 cut(s) 772, 924
NmeAIII GCCGAG 1 cut(s) 363
NmuCI GTSAC 1 cut(s) 325
NsiI ATGCAT 1 cut(s) 602
NspI RCATGY 1 cut(s) 64
PagI TCATGA 2 cut(s) 102, 1016
PciI ACATGT 1 cut(s) 60
PfeI GAWTC 2 cut(s) 201, 668
PkrI GCNGC 2 cut(s) 210, 421
PleI GAGTC 2 cut(s) 888, 1012
PpsI GAGTC 2 cut(s) 888, 1012
PscI ACATGT 1 cut(s) 60
Psp6I CCWGG 4 cut(s) 23, 69, 510, 843
PspFI CCCAGC 1 cut(s) 959
PspGI CCWGG 4 cut(s) 23, 69, 510, 843
PspN4I GGNNCC 2 cut(s) 772, 924
PspPI GGNCC 1 cut(s) 746
PsrI GAACNNNNNNTAC 2 cut(s) 50, 82
PsuI RGATCY 2 cut(s) 375, 688
RsaI GTAC 2 cut(s) 59, 737
RsaNI GTAC 2 cut(s) 58, 736
RseI CAYNNNNRTG 1 cut(s) 216
SaqAI TTAA 1 cut(s) 656
SatI GCNGC 2 cut(s) 209, 420
Sau3AI GATC 4 cut(s) 375, 580, 688, 928
Sau96I GGNCC 1 cut(s) 746
SchI GAGTC 2 cut(s) 888, 1013
ScrFI CCNGG 4 cut(s) 25, 71, 512, 845
SduI GDGCHC 1 cut(s) 453
SfaNI GCATC 2 cut(s) 451, 837
SfcI CTRYAG 1 cut(s) 684
SinI GGWCC 1 cut(s) 746
SmiMI CAYNNNNRTG 1 cut(s) 216
SpeI ACTAGT 1 cut(s) 320
Sse9I AATT 7 cut(s) 224, 363, 407, 528, 653, 879, 969
SsiI CCGC 1 cut(s) 21
SspMI CTAG 3 cut(s) 321, 623, 996
StyD4I CCNGG 4 cut(s) 23, 69, 510, 843
TaaI ACNGT 1 cut(s) 341
TaqI TCGA 1 cut(s) 391
TasI AATT 7 cut(s) 224, 363, 407, 528, 653, 879, 969
TatI WGTACW 2 cut(s) 57, 735
TfiI GAWTC 2 cut(s) 201, 668
Tru1I TTAA 1 cut(s) 656
Tru9I TTAA 1 cut(s) 656
TscAI CASTG 2 cut(s) 546, 678
TseFI GTSAC 1 cut(s) 325
TseI GCWGC 2 cut(s) 208, 419
Tsp45I GTSAC 1 cut(s) 325
TspDTI ATGAA 3 cut(s) 105, 309, 996
TspGWI ACGGA 1 cut(s) 929
TspRI CASTG 2 cut(s) 546, 678
VpaK11BI GGWCC 1 cut(s) 746
XapI RAATTY 1 cut(s) 969
XbaI TCTAGA 1 cut(s) 995
XceI RCATGY 1 cut(s) 64
XcmI CCANNNNNNNNNTGG 1 cut(s) 136
XmiI GTMKAC 2 cut(s) 683, 852
XspI CTAG 3 cut(s) 321, 623, 996
Zsp2I ATGCAT 1 cut(s) 602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.