Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002599

Physical Location & Seq

Genomic Coordinates Forward (+)

13929204 .. 13933785

Gene Structure 4582 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G113500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1032 bp

ATGAACTTGTGGCAAGCAACCACCAACTGGTGGAGAATCCATGGAACTTTGCGAACTCTGTACCTCCTGTTTTTGGGTCAGGTCGTCTCCTTTGTTCTCGCACTCATGAGCGTCACTTCCTCTCTTATAGCCACTCTCGGTGTGGATGCGCCTATTACACAGACTATGTCTACTTACTTCGGTTTGGCTTTGATTTATGGGAGCATCTTGGTGTATAGGCGTGAGAAGCTACGGGTTTCTTGGTATTGGTATCTACTCTTGGGGTTTGTTGATGTTCAGGGGAACTATCTTGTGAACGAAGCATACCAGTTCTCATCAATTACAAGTGTGACACTATTGGACTGTTTCACAATAGCTTGGGTCATAATTTTGACGTGGATCTTCCTACGCACTCGATATTCCCTATGGCAATTGTTTGGAGCAGCCACCTGTGTGGTGGGCCTTGGTTTAGTGCTTCTTTCTGATGCCGGGGTGGGTGGTGGAGGTGGCTCAAAACCTCTTCTAGGGGACATACTTGTCATCGCAGGAACCATTTTCTTTGCCATGAGCAATGTTGGTGAGGAGTTTTGCGTTAAGAAAAAAGACCGTGTTGAAGTAATTTGCATGATCGGTGTTTATGGATTTCTAGTGAGTGCATGTCAGATGTCTATCCTGGAATTAAAGACTCTGGAGTCAGTTGAGTGGTCTACAGATATTATATTAGCCTTTGCTGGTTATGGTGTATCAGGCTTATTGTTCTACACACTTGCTCCATTTGTTCTCAAGTTGAGCGGAGCGACATTGTTGAATCTCTCTATTCTCACATCTGATATGTGGGCAGTTGTCTTTCGCATCTTTTTCTATCGCCAGCAGGTAGACTGGTTATACTATCTAGCGTTTGCAGTTGTAGTTATCGGACTCATCATTTATTCATTAACGGAAAAAGATCCGGTTCCTGTACCAGCACTTGAAAATGGAAACCCCAGCTTGGAATACCAAGTTCTTGAAGATGAAAGTGCTACTACACCAAGAAATCAAGCTTTGACTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SLC35F

Protein Analysis

344

Amino Acids

38.15

Weight (kDa)

4.99

Isoelectric Point (pI)

26.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59310 AT3G59310 AT3G59310 AT3G59320 AT3G59320 AT3G59340 AT3G59340 AT3G59340 AT3G59340
fragaria_vesca	FvH4_4g11520 FvH4_6g18390
malus_domestica	MD04G1036800.v1.1 MD14G1020100.v1.1
prunus_persica	Prupe.1G186000_v2.0.a1 Prupe.7G113500_v2.0.a1
pyrus_communis	pycom04g02990 pycom14g01970
rosa_chinensis	RchiOBHm_Chr3g0472881 RchiOBHm_Chr4g0408431
rosa_laevigata	RLG00000008651 RLG00000024049
rosa_multiflora	Rmu_co8481489.1_g000001 Rmu_sc0000787.1_g000011
rosa_roxburghii	Rroxscaffold_5G00352900 Rroxscaffold_6G00408510
rosa_rugosa	Rorug03G0128900 Rorug03G0129000 Rorug03G0129100 Rorug04G0085800 Rorug04G0085900
rosa_samantha	Rh3AG181100 Rh3BG207300 Rh3CG204500 Rh3DG168500 Rh4AG150500 Rh4BG147800 Rh4CG157800 Rh4DG143400
rosa_wichuraiana	Rw3G016200 Rw4G012290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	515, 670
Acc36I	ACCTGC	1 cut(s)	841
AccB7I	CCANNNNNTGG	2 cut(s)	27, 30
AccBSI	CCGCTC	1 cut(s)	771
AccI	GTMKAC	3 cut(s)	170, 686, 855
AciI	CCGC	1 cut(s)	771
AclWI	GGATC	2 cut(s)	386, 920
AfaI	GTAC	2 cut(s)	62, 939
AfiI	CCNNNNNNNGG	5 cut(s)	27, 30, 73, 503, 967
AgsI	TTSAA	4 cut(s)	593, 787, 950, 986
AjiI	CACGTC	1 cut(s)	375
AjnI	CCWGG	1 cut(s)	651
AleI	CACNNNNGTG	1 cut(s)	431
AluBI	AGCT	4 cut(s)	229, 356, 966, 1019
AluI	AGCT	4 cut(s)	229, 356, 966, 1019
Alw26I	GTCTC	1 cut(s)	91
AlwI	GGATC	2 cut(s)	386, 920
AoxI	GGCC	1 cut(s)	439
ApeKI	GCWGC	1 cut(s)	422
AspLEI	GCGC	1 cut(s)	151
AspS9I	GGNCC	1 cut(s)	439
AsuC2I	CCSGG	1 cut(s)	469
AsuHPI	GGTGA	1 cut(s)	569
BbvI	GCAGC	1 cut(s)	434
BciT130I	CCWGG	1 cut(s)	653
BcnI	CCSGG	1 cut(s)	469
BcoDI	GTCTC	1 cut(s)	91
BfaI	CTAG	3 cut(s)	503, 626, 872
BfmI	CTRYAG	1 cut(s)	687
BfuAI	ACCTGC	1 cut(s)	841
BisI	GCNGC	1 cut(s)	423
BlsI	GCNGC	1 cut(s)	424
Bme1390I	CCNGG	2 cut(s)	469, 653
BmgBI	CACGTC	1 cut(s)	375
BmgT120I	GGNCC	1 cut(s)	439
BmiI	GGNNCC	2 cut(s)	529, 933
BmrFI	CCNGG	2 cut(s)	469, 653
BmsI	GCATC	4 cut(s)	136, 213, 454, 840
BpmI	CTGGAG	1 cut(s)	689
BpuEI	CTTGAG	1 cut(s)	746
BpuMI	CCSGG	1 cut(s)	469
BsaBI	GATNNNNATC	1 cut(s)	647
BsaJI	CCNNGG	3 cut(s)	40, 442, 468
BsaWI	WCCGGW	1 cut(s)	928
BsaXI	ACNNNNNCTCC	2 cut(s)	733, 763
Bsc4I	CCNNNNNNNGG	5 cut(s)	27, 30, 73, 503, 967
Bse1I	ACTGG	3 cut(s)	32, 307, 863
Bse3DI	GCAATG	1 cut(s)	556
Bse8I	GATNNNNATC	1 cut(s)	647
BseBI	CCWGG	1 cut(s)	653
BseDI	CCNNGG	3 cut(s)	40, 442, 468
BseGI	GGATG	1 cut(s)	151
BseJI	GATNNNNATC	1 cut(s)	647
BseLI	CCNNNNNNNGG	5 cut(s)	27, 30, 73, 503, 967
BseMI	GCAATG	1 cut(s)	556
BseNI	ACTGG	3 cut(s)	32, 307, 863
BseRI	GAGGAG	1 cut(s)	575
BseXI	GCAGC	1 cut(s)	434
BseYI	CCCAGC	1 cut(s)	962
BshFI	GGCC	1 cut(s)	441
BsiSI	CCGG	2 cut(s)	468, 929
BslFI	GGGAC	1 cut(s)	521
BslI	CCNNNNNNNGG	5 cut(s)	27, 30, 73, 503, 967
BsmAI	GTCTC	1 cut(s)	91
BsmBI	CGTCTC	1 cut(s)	91
BsmFI	GGGAC	1 cut(s)	521
BsnI	GGCC	1 cut(s)	441
Bsp143I	GATC	3 cut(s)	378, 606, 925
Bsp19I	CCATGG	1 cut(s)	40
BspACI	CCGC	1 cut(s)	771
BspANI	GGCC	1 cut(s)	441
BspHI	TCATGA	2 cut(s)	105, 1028
BspLI	GGNNCC	2 cut(s)	529, 933
BspMI	ACCTGC	1 cut(s)	841
BspPI	GGATC	2 cut(s)	386, 920
BsrBI	CCGCTC	1 cut(s)	771
BsrDI	GCAATG	1 cut(s)	556
BsrI	ACTGG	3 cut(s)	32, 307, 863
BssECI	CCNNGG	3 cut(s)	40, 442, 468
BssMI	GATC	3 cut(s)	378, 606, 925
BssT1I	CCWWGG	2 cut(s)	40, 442
Bst2UI	CCWGG	1 cut(s)	653
Bst4CI	ACNGT	2 cut(s)	344, 587
Bst6I	CTCTTC	1 cut(s)	504
BstC8I	GCNNGC	2 cut(s)	15, 848
BstDSI	CCRYGG	1 cut(s)	40
BstENI	CCTNNNNNAGG	1 cut(s)	501
BstF5I	GGATG	1 cut(s)	151
BstHHI	GCGC	1 cut(s)	151
BstKTI	GATC	3 cut(s)	381, 609, 928
BstMAI	GTCTC	1 cut(s)	91
BstMBI	GATC	3 cut(s)	378, 606, 925
BstMWI	GCNNNNNNNGC	1 cut(s)	226
BstNI	CCWGG	1 cut(s)	653
BstNSI	RCATGY	1 cut(s)	639
BstSCI	CCNGG	2 cut(s)	467, 651
BstSFI	CTRYAG	1 cut(s)	687
BstV1I	GCAGC	1 cut(s)	434
BstX2I	RGATCY	2 cut(s)	378, 925
BstXI	CCANNNNNNTGG	1 cut(s)	433
BstYI	RGATCY	2 cut(s)	378, 925
BsuRI	GGCC	1 cut(s)	441
BtgI	CCRYGG	1 cut(s)	40
BtgZI	GCGATG	1 cut(s)	505
BtrI	CACGTC	1 cut(s)	375
BtsCI	GGATG	1 cut(s)	151
BveI	ACCTGC	1 cut(s)	841
Cac8I	GCNNGC	2 cut(s)	15, 848
CciI	TCATGA	2 cut(s)	105, 1028
CfoI	GCGC	1 cut(s)	151
Cfr13I	GGNCC	1 cut(s)	439
CseI	GACGC	1 cut(s)	100
Csp6I	GTAC	2 cut(s)	61, 938
CviAII	CATG	6 cut(s)	41, 106, 544, 604, 636, 1029
CviQI	GTAC	2 cut(s)	61, 938
DpnI	GATC	3 cut(s)	380, 608, 927
DpnII	GATC	3 cut(s)	378, 606, 925
DrdI	GACNNNNNNGTC	2 cut(s)	515, 670
DseDI	GACNNNNNNGTC	2 cut(s)	515, 670
Eam1104I	CTCTTC	1 cut(s)	504
EarI	CTCTTC	1 cut(s)	504
Eco130I	CCWWGG	2 cut(s)	40, 442
EcoNI	CCTNNNNNAGG	1 cut(s)	501
EcoRII	CCWGG	1 cut(s)	651
EcoT14I	CCWWGG	2 cut(s)	40, 442
ErhI	CCWWGG	2 cut(s)	40, 442
Esp3I	CGTCTC	1 cut(s)	91
FaeI	CATG	6 cut(s)	44, 109, 547, 607, 639, 1032
FaqI	GGGAC	1 cut(s)	521
FatI	CATG	6 cut(s)	40, 105, 543, 603, 635, 1028
FblI	GTMKAC	3 cut(s)	170, 686, 855
Fnu4HI	GCNGC	1 cut(s)	423
FokI	GGATG	1 cut(s)	158
Fsp4HI	GCNGC	1 cut(s)	423
FspBI	CTAG	3 cut(s)	503, 626, 872
GlaI	GCGC	1 cut(s)	150
GluI	GCNGC	1 cut(s)	423
GsaI	CCCAGC	1 cut(s)	966
GsuI	CTGGAG	1 cut(s)	689
HaeIII	GGCC	1 cut(s)	441
HapII	CCGG	2 cut(s)	468, 929
HgaI	GACGC	1 cut(s)	100
HhaI	GCGC	1 cut(s)	151
Hin1II	CATG	6 cut(s)	44, 109, 547, 607, 639, 1032
Hin6I	GCGC	1 cut(s)	149
HinP1I	GCGC	1 cut(s)	149
HindIII	AAGCTT	1 cut(s)	1017
HinfI	GANTC	5 cut(s)	36, 664, 671, 787, 897
HpaII	CCGG	2 cut(s)	468, 929
HphI	GGTGA	1 cut(s)	569
Hpy166II	GTNNAC	4 cut(s)	171, 295, 687, 856
Hpy188I	TCNGA	4 cut(s)	463, 642, 808, 896
Hpy188III	TCNNGA	4 cut(s)	106, 668, 983, 1029
Hpy8I	GTNNAC	4 cut(s)	171, 295, 687, 856
HpyCH4III	ACNGT	2 cut(s)	344, 587
HpyCH4IV	ACGT	1 cut(s)	374
HpyCH4V	TGCA	3 cut(s)	603, 635, 881
HpyF10VI	GCNNNNNNNGC	1 cut(s)	226
HpySE526I	ACGT	1 cut(s)	374
Hsp92II	CATG	6 cut(s)	44, 109, 547, 607, 639, 1032
HspAI	GCGC	1 cut(s)	149
Kzo9I	GATC	3 cut(s)	378, 606, 925
LmnI	GCTCC	4 cut(s)	201, 419, 754, 773
Lsp1109I	GCAGC	1 cut(s)	434
LweI	GCATC	4 cut(s)	136, 213, 454, 840
MaeI	CTAG	3 cut(s)	503, 626, 872
MaeII	ACGT	1 cut(s)	374
MaeIII	GTNAC	2 cut(s)	112, 328
MalI	GATC	3 cut(s)	380, 608, 927
MbiI	CCGCTC	1 cut(s)	771
MboI	GATC	3 cut(s)	378, 606, 925
MboII	GAAGA	3 cut(s)	373, 491, 998
MfeI	CAATTG	1 cut(s)	410
MflI	RGATCY	2 cut(s)	378, 925
MluCI	AATT	5 cut(s)	318, 366, 410, 597, 656
MlyI	GAGTC	3 cut(s)	658, 680, 891
MnlI	CCTC	5 cut(s)	74, 130, 476, 507, 553
MseI	TTAA	3 cut(s)	573, 659, 914
MslI	CAYNNNNRTG	2 cut(s)	209, 431
MspI	CCGG	2 cut(s)	468, 929
MspR9I	CCNGG	2 cut(s)	469, 653
MunI	CAATTG	1 cut(s)	410
MvaI	CCWGG	1 cut(s)	653
MwoI	GCNNNNNNNGC	1 cut(s)	226
NciI	CCSGG	1 cut(s)	469
NcoI	CCATGG	1 cut(s)	40
NdeII	GATC	3 cut(s)	378, 606, 925
NlaIII	CATG	6 cut(s)	44, 109, 547, 607, 639, 1032
NlaIV	GGNNCC	2 cut(s)	529, 933
NmuCI	GTSAC	2 cut(s)	112, 328
NspI	RCATGY	1 cut(s)	639
OliI	CACNNNNGTG	1 cut(s)	431
PagI	TCATGA	2 cut(s)	105, 1028
PfeI	GAWTC	2 cut(s)	36, 787
PflFI	GACNNNGTC	1 cut(s)	166
PflMI	CCANNNNNTGG	2 cut(s)	27, 30
PfoI	TCCNGGA	1 cut(s)	651
PkrI	GCNGC	1 cut(s)	424
PleI	GAGTC	3 cut(s)	658, 679, 891
PpsI	GAGTC	3 cut(s)	658, 679, 891
Psp6I	CCWGG	1 cut(s)	651
PspFI	CCCAGC	1 cut(s)	962
PspGI	CCWGG	1 cut(s)	651
PspN4I	GGNNCC	2 cut(s)	529, 933
PspPI	GGNCC	1 cut(s)	439
PsrI	GAACNNNNNNTAC	2 cut(s)	287, 319
PsuI	RGATCY	2 cut(s)	378, 925
PsyI	GACNNNGTC	1 cut(s)	166
RsaI	GTAC	2 cut(s)	62, 939
RsaNI	GTAC	2 cut(s)	61, 938
RseI	CAYNNNNRTG	2 cut(s)	209, 431
SaqAI	TTAA	3 cut(s)	573, 659, 914
SatI	GCNGC	1 cut(s)	423
Sau3AI	GATC	3 cut(s)	378, 606, 925
Sau96I	GGNCC	1 cut(s)	439
SchI	GAGTC	3 cut(s)	658, 680, 891
ScrFI	CCNGG	2 cut(s)	469, 653
SfaNI	GCATC	4 cut(s)	136, 213, 454, 840
SfcI	CTRYAG	1 cut(s)	687
SmiMI	CAYNNNNRTG	2 cut(s)	209, 431
SmlI	CTYRAG	1 cut(s)	761
SmoI	CTYRAG	1 cut(s)	761
Sse9I	AATT	5 cut(s)	318, 366, 410, 597, 656
SsiI	CCGC	1 cut(s)	771
SspMI	CTAG	3 cut(s)	503, 626, 872
StyD4I	CCNGG	2 cut(s)	467, 651
StyI	CCWWGG	2 cut(s)	40, 442
TaaI	ACNGT	2 cut(s)	344, 587
TaiI	ACGT	1 cut(s)	377
TaqI	TCGA	1 cut(s)	394
TasI	AATT	5 cut(s)	318, 366, 410, 597, 656
TfiI	GAWTC	2 cut(s)	36, 787
Tru1I	TTAA	3 cut(s)	573, 659, 914
Tru9I	TTAA	3 cut(s)	573, 659, 914
TseFI	GTSAC	2 cut(s)	112, 328
TseI	GCWGC	1 cut(s)	422
Tsp45I	GTSAC	2 cut(s)	112, 328
TspDTI	ATGAA	4 cut(s)	17, 900, 1005, 1017
TspGWI	ACGGA	1 cut(s)	932
Tth111I	GACNNNGTC	1 cut(s)	166
Van91I	CCANNNNNTGG	2 cut(s)	27, 30
XagI	CCTNNNNNAGG	1 cut(s)	501
XceI	RCATGY	1 cut(s)	639
XcmI	CCANNNNNNNNNTGG	2 cut(s)	139, 433
XmiI	GTMKAC	3 cut(s)	170, 686, 855
XspI	CTAG	3 cut(s)	503, 626, 872

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.