Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002675

Physical Location & Seq

Genomic Coordinates Reverse (-)

30925363 .. 30930819

Gene Structure 5457 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G323900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1113 bp

ATGGGCTCTGCCTCTCTTTGTTTCTCTCTGCAAAACTCGTGCAACGCTTCCTCTGCAACCGGTATTCTCTACGACCCTCCCCTCGGCTTCCGCTTTCGATCGCGGATCAGGAAGATTGTTAGAATGTCTGCAACTCAAACTGAAAATCCCAGAATATCATTTGAATCCTTGCCAATAAAGCCTCCTTCACATCCCACCTATGATTTGTGGGGTGTTATCAAGTCGGCACTTTCTGAAGATGCTGGGGATCGAGGTGACGTGACATGTCTGGCGACCATTCCATCTGATATGGAAGTGGAAGCCCATTTTTTGGCAAAGGAGAATGGTATAATTGCTGGAATTGCACTTGCAGAGATGGTATTTCATGAAGTGGATCCTTCTCTGAAGGTTGAGTGGTCACAAAAGGATGGAGACTCTGTACATAAAGGCCTAGATTTTGGAAAAGTTTATGGACGAGCACACAGCATTGTTGTAGCTGAGAGGGTAGCACTGAATTTTATGCAGAGGATGAGTGGAGTAGCAACTTTAACTAAGGCAATGGCAGATCTTGCAAGCCCTGCACGTATTTTAGAGACAAGAAAAACTGCTCCAGGTTTACGTTTGGTGGACAAGTGGGCGGTACTCATTGGTGGAGGTCGAAATCACAGAATGGGTTTATTTGATATGGTAATGATAAAAGATAATCATATATCAATAGCTGGAGGCATCACAAATGCCCTCAAATCTGTAGACCTGTATTTAGAGCAAAGGAATCTCCAGATGGAGGTTGAGGTTGAGACCCGGACAATTGAGGAGGTAGACAAGGTATTGGATTATGCATCTCAAACAGAGACTTCCTTGACCCGAATAATGTTGGATAATATGGTTGTACCACTACCTAATGGGGATGTTGATGTAACCATGCTTGAACAAGCTGTGAATTTGATTGGTCGAAGATTTGAAACTGAGGCATCCGGCAATGTTACTCTTGAAACAGTACACAAAATTGGACAAACGGGGGTCGACTATATTTCTAGTGGTGCACTGACTCATTCAGTAAAGGCTCTAGACATCTCCCTCAAGATTGATACGGAGTTGGCTCTTCAAGTTGGAAGGCGCACTCAACGAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004514 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009987 GO:0016054 GO:0016740 GO:0016757 GO:0016763 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0019752 GO:0034213 GO:0034641 GO:0034654 GO:0042737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043649 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0046483 GO:0046496 GO:0046700 GO:0046874 GO:0051186 GO:0051188 GO:0055086 GO:0071704 GO:0072524 GO:0072525 GO:0072526 GO:0090407 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901565 GO:1901566 GO:1901575 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

QRPTase_C QRPTase_N

Protein Analysis

371

Amino Acids

40.51

Weight (kDa)

5.89

Isoelectric Point (pI)

29.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002675)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01350 AT2G01350 AT2G01350 AT2G01350
fragaria_vesca	FvH4_4g32330 FvH4_4g32330 FvH4_4g32330 FvH4_4g32330
malus_domestica	MD16G1029000.v1.1
prunus_persica	Prupe.1G323900_v2.0.a1 Prupe.1G323900_v2.0.a1 Prupe.1G323900_v2.0.a1 Prupe.1G323900_v2.0.a1 Prupe.1G323900_v2.0.a1
pyrus_communis	pycom16g02470
rosa_chinensis	RchiOBHm_Chr2g0157601 RchiOBHm_Chr4g0441121
rosa_laevigata	RLG00000006112
rosa_multiflora	Rmu_sc0000607.1_g000026 Rmu_sc0006317.1_g000018 Rmu_sc0017059.1_g000001
rosa_roxburghii	Rroxscaffold_5G00382090
rosa_rugosa	Rorug03G0337500 Rorug04G0331400
rosa_samantha	Rh1AG340100 Rh2BG059800 Rh2BG243400 Rh2BG348100 Rh2DG286800 Rh3BG365900 Rh4AG382900 Rh4BG396800 Rh4CG411800 Rh4DG389700 Rh5BG215200 Rh5BG425100 Rh6BG216200 Rh6DG027200
rosa_wichuraiana	Rw4G033050 Rw6G003900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	310
AccI	GTMKAC	3 cut(s)	729, 798, 1002
AccII	CGCG	1 cut(s)	103
AciI	CCGC	3 cut(s)	91, 103, 617
AclWI	GGATC	4 cut(s)	113, 255, 368, 381
AcsI	RAATTY	2 cut(s)	493, 919
AcuI	CTGAAG	2 cut(s)	255, 404
AfaI	GTAC	4 cut(s)	420, 621, 870, 978
AfiI	CCNNNNNNNGG	3 cut(s)	83, 310, 763
AflIII	ACRYGT	1 cut(s)	263
AgeI	ACCGGT	1 cut(s)	59
AgsI	TTSAA	5 cut(s)	164, 908, 941, 971, 1085
AjiI	CACGTC	1 cut(s)	259
AjnI	CCWGG	1 cut(s)	589
AluBI	AGCT	3 cut(s)	476, 698, 914
AluI	AGCT	3 cut(s)	476, 698, 914
Alw21I	GWGCWC	2 cut(s)	460, 1024
Alw26I	GTCTC	4 cut(s)	405, 566, 770, 824
Alw44I	GTGCAC	1 cut(s)	1020
AlwI	GGATC	4 cut(s)	113, 255, 368, 381
AoxI	GGCC	1 cut(s)	427
ApaLI	GTGCAC	1 cut(s)	1020
ApoI	RAATTY	2 cut(s)	493, 919
AsiGI	ACCGGT	1 cut(s)	59
AspLEI	GCGC	1 cut(s)	1098
AsuC2I	CCSGG	1 cut(s)	781
AsuHPI	GGTGA	1 cut(s)	266
BaeGI	GKGCMC	1 cut(s)	1024
BamHI	GGATCC	1 cut(s)	373
BanII	GRGCYC	1 cut(s)	8
BauI	CACGAG	1 cut(s)	37
Bbv12I	GWGCWC	2 cut(s)	460, 1024
BccI	CCATC	4 cut(s)	289, 349, 401, 754
BciT130I	CCWGG	1 cut(s)	591
BcnI	CCSGG	1 cut(s)	781
BcoDI	GTCTC	4 cut(s)	405, 566, 770, 824
BfaI	CTAG	3 cut(s)	431, 1014, 1046
BfmI	CTRYAG	1 cut(s)	726
BglII	AGATCT	1 cut(s)	544
Bme1390I	CCNGG	2 cut(s)	591, 781
BmgBI	CACGTC	1 cut(s)	259
BmiI	GGNNCC	1 cut(s)	375
BmrFI	CCNGG	2 cut(s)	591, 781
BmsI	GCATC	4 cut(s)	229, 714, 827, 959
BpmI	CTGGAG	3 cut(s)	573, 720, 740
BpuEI	CTTGAG	1 cut(s)	1043
BpuMI	CCSGG	1 cut(s)	781
BsaAI	YACGTR	1 cut(s)	563
BsaI	GGTCTC	1 cut(s)	770
BsaJI	CCNNGG	1 cut(s)	82
BsaWI	WCCGGW	1 cut(s)	59
BsaXI	ACNNNNNCTCC	2 cut(s)	402, 432
Bsc4I	CCNNNNNNNGG	3 cut(s)	83, 310, 763
Bse118I	RCCGGY	1 cut(s)	59
Bse3DI	GCAATG	2 cut(s)	543, 964
BseBI	CCWGG	1 cut(s)	591
BseDI	CCNNGG	1 cut(s)	82
BseGI	GGATG	5 cut(s)	190, 412, 513, 892, 950
BseLI	CCNNNNNNNGG	3 cut(s)	83, 310, 763
BseMI	GCAATG	2 cut(s)	543, 964
BseMII	CTCAG	2 cut(s)	468, 936
BseRI	GAGGAG	1 cut(s)	806
BseSI	GKGCMC	1 cut(s)	1024
BseYI	CCCAGC	1 cut(s)	242
BsgI	GTGCAG	1 cut(s)	543
Bsh1236I	CGCG	1 cut(s)	103
Bsh1285I	CGRYCG	1 cut(s)	101
BshFI	GGCC	1 cut(s)	429
BshTI	ACCGGT	1 cut(s)	59
BsiEI	CGRYCG	1 cut(s)	101
BsiHKAI	GWGCWC	2 cut(s)	460, 1024
BsiSI	CCGG	3 cut(s)	60, 781, 954
BslI	CCNNNNNNNGG	3 cut(s)	83, 310, 763
BsmAI	GTCTC	4 cut(s)	405, 566, 770, 824
BsnI	GGCC	1 cut(s)	429
Bso31I	GGTCTC	1 cut(s)	770
Bsp1286I	GDGCHC	3 cut(s)	8, 460, 1024
Bsp1407I	TGTACA	1 cut(s)	418
Bsp143I	GATC	5 cut(s)	98, 105, 247, 373, 544
BspACI	CCGC	3 cut(s)	91, 103, 617
BspANI	GGCC	1 cut(s)	429
BspCNI	CTCAG	2 cut(s)	469, 937
BspFNI	CGCG	1 cut(s)	103
BspHI	TCATGA	1 cut(s)	364
BspLI	GGNNCC	1 cut(s)	375
BspPI	GGATC	4 cut(s)	113, 255, 368, 381
BspQI	GCTCTTC	1 cut(s)	1086
BspTNI	GGTCTC	1 cut(s)	770
BsrDI	GCAATG	2 cut(s)	543, 964
BsrFI	RCCGGY	1 cut(s)	59
BsrGI	TGTACA	1 cut(s)	418
BssAI	RCCGGY	1 cut(s)	59
BssECI	CCNNGG	1 cut(s)	82
BssMI	GATC	5 cut(s)	98, 105, 247, 373, 544
BssSI	CACGAG	1 cut(s)	37
Bst2BI	CACGAG	1 cut(s)	37
Bst2UI	CCWGG	1 cut(s)	591
Bst4CI	ACNGT	1 cut(s)	976
Bst6I	CTCTTC	1 cut(s)	1086
BstAPI	GCANNNNNTGC	2 cut(s)	548, 557
BstAUI	TGTACA	1 cut(s)	418
BstBAI	YACGTR	1 cut(s)	563
BstC8I	GCNNGC	1 cut(s)	553
BstDEI	CTNAG	3 cut(s)	477, 531, 945
BstF5I	GGATG	5 cut(s)	190, 412, 513, 892, 950
BstFNI	CGCG	1 cut(s)	103
BstHHI	GCGC	1 cut(s)	1098
BstKTI	GATC	5 cut(s)	101, 108, 250, 376, 547
BstMAI	GTCTC	4 cut(s)	405, 566, 770, 824
BstMBI	GATC	5 cut(s)	98, 105, 247, 373, 544
BstMCI	CGRYCG	1 cut(s)	101
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 178, 341, 548, 557
BstNI	CCWGG	1 cut(s)	591
BstNSI	RCATGY	1 cut(s)	267
BstSCI	CCNGG	2 cut(s)	589, 779
BstSFI	CTRYAG	1 cut(s)	726
BstSLI	GKGCMC	1 cut(s)	1024
BstUI	CGCG	1 cut(s)	103
BstX2I	RGATCY	2 cut(s)	373, 544
BstYI	RGATCY	2 cut(s)	373, 544
BsuRI	GGCC	1 cut(s)	429
BtrI	CACGTC	1 cut(s)	259
BtsCI	GGATG	5 cut(s)	190, 412, 513, 892, 950
BtsIMutI	CAGTG	2 cut(s)	488, 1022
Cac8I	GCNNGC	1 cut(s)	553
CciI	TCATGA	1 cut(s)	364
CfoI	GCGC	1 cut(s)	1098
Cfr10I	RCCGGY	1 cut(s)	59
Csp6I	GTAC	4 cut(s)	419, 620, 869, 977
CspAI	ACCGGT	1 cut(s)	59
CviAII	CATG	4 cut(s)	264, 365, 901, 1110
CviQI	GTAC	4 cut(s)	419, 620, 869, 977
DdeI	CTNAG	3 cut(s)	477, 531, 945
DpnI	GATC	5 cut(s)	100, 107, 249, 375, 546
DpnII	GATC	5 cut(s)	98, 105, 247, 373, 544
Eam1104I	CTCTTC	1 cut(s)	1086
EarI	CTCTTC	1 cut(s)	1086
Eco147I	AGGCCT	1 cut(s)	429
Eco24I	GRGCYC	1 cut(s)	8
Eco31I	GGTCTC	1 cut(s)	770
Eco57I	CTGAAG	2 cut(s)	255, 404
EcoRII	CCWGG	1 cut(s)	589
EcoT22I	ATGCAT	1 cut(s)	820
EcoT38I	GRGCYC	1 cut(s)	8
FaeI	CATG	4 cut(s)	267, 368, 904, 1113
FatI	CATG	4 cut(s)	263, 364, 900, 1109
FblI	GTMKAC	3 cut(s)	729, 798, 1002
FokI	GGATG	5 cut(s)	177, 419, 520, 899, 937
FriOI	GRGCYC	1 cut(s)	8
FspBI	CTAG	3 cut(s)	431, 1014, 1046
GlaI	GCGC	1 cut(s)	1097
GsaI	CCCAGC	1 cut(s)	246
GsuI	CTGGAG	3 cut(s)	573, 720, 740
HaeIII	GGCC	1 cut(s)	429
HapII	CCGG	3 cut(s)	60, 781, 954
HhaI	GCGC	1 cut(s)	1098
Hin1II	CATG	4 cut(s)	267, 368, 904, 1113
Hin6I	GCGC	1 cut(s)	1096
HinP1I	GCGC	1 cut(s)	1096
HincII	GTYRAC	1 cut(s)	1003
HindII	GTYRAC	1 cut(s)	1003
HinfI	GANTC	4 cut(s)	164, 413, 751, 1027
HpaII	CCGG	3 cut(s)	60, 781, 954
HphI	GGTGA	1 cut(s)	266
Hpy166II	GTNNAC	7 cut(s)	596, 607, 730, 799, 979, 1003, 1022
Hpy188I	TCNGA	3 cut(s)	235, 286, 384
Hpy188III	TCNNGA	6 cut(s)	109, 365, 757, 968, 1046, 1060
Hpy8I	GTNNAC	7 cut(s)	596, 607, 730, 799, 979, 1003, 1022
HpyAV	CCTTC	4 cut(s)	195, 379, 387, 1086
HpyCH4III	ACNGT	1 cut(s)	976
HpyCH4IV	ACGT	3 cut(s)	258, 562, 598
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 178, 341, 548, 557
HpyF3I	CTNAG	3 cut(s)	477, 531, 945
HpySE526I	ACGT	3 cut(s)	258, 562, 598
Hsp92II	CATG	4 cut(s)	267, 368, 904, 1113
HspAI	GCGC	1 cut(s)	1096
Kzo9I	GATC	5 cut(s)	98, 105, 247, 373, 544
LguI	GCTCTTC	1 cut(s)	1086
LmnI	GCTCC	1 cut(s)	592
LweI	GCATC	4 cut(s)	229, 714, 827, 959
MaeI	CTAG	3 cut(s)	431, 1014, 1046
MaeII	ACGT	3 cut(s)	258, 562, 598
MaeIII	GTNAC	5 cut(s)	254, 259, 396, 895, 961
MalI	GATC	5 cut(s)	100, 107, 249, 375, 546
MboI	GATC	5 cut(s)	98, 105, 247, 373, 544
MboII	GAAGA	4 cut(s)	124, 248, 945, 1073
MfeI	CAATTG	1 cut(s)	786
MflI	RGATCY	2 cut(s)	373, 544
MhlI	GDGCHC	3 cut(s)	8, 460, 1024
MluCI	AATT	6 cut(s)	330, 339, 493, 786, 919, 984
MlyI	GAGTC	2 cut(s)	407, 1021
MmeI	TCCRAC	2 cut(s)	834, 1069
Mph1103I	ATGCAT	1 cut(s)	820
MseI	TTAA	1 cut(s)	527
MspI	CCGG	3 cut(s)	60, 781, 954
MspR9I	CCNGG	2 cut(s)	591, 781
MunI	CAATTG	1 cut(s)	786
MvaI	CCWGG	1 cut(s)	591
MvnI	CGCG	1 cut(s)	103
MwoI	GCNNNNNNNGC	5 cut(s)	53, 178, 341, 548, 557
NciI	CCSGG	1 cut(s)	781
NdeII	GATC	5 cut(s)	98, 105, 247, 373, 544
NlaIII	CATG	4 cut(s)	267, 368, 904, 1113
NlaIV	GGNNCC	1 cut(s)	375
NmeAIII	GCCGAG	1 cut(s)	63
NmuCI	GTSAC	3 cut(s)	254, 259, 396
NsiI	ATGCAT	1 cut(s)	820
NspI	RCATGY	1 cut(s)	267
PagI	TCATGA	1 cut(s)	364
PceI	AGGCCT	1 cut(s)	429
PciI	ACATGT	1 cut(s)	263
PciSI	GCTCTTC	1 cut(s)	1086
PfeI	GAWTC	2 cut(s)	164, 751
PflMI	CCANNNNNTGG	1 cut(s)	310
PinAI	ACCGGT	1 cut(s)	59
Ple19I	CGATCG	1 cut(s)	101
PleI	GAGTC	2 cut(s)	407, 1021
PpsI	GAGTC	2 cut(s)	407, 1021
Ppu21I	YACGTR	1 cut(s)	563
PscI	ACATGT	1 cut(s)	263
Psp6I	CCWGG	1 cut(s)	589
PspFI	CCCAGC	1 cut(s)	242
PspGI	CCWGG	1 cut(s)	589
PspN4I	GGNNCC	1 cut(s)	375
PsuI	RGATCY	2 cut(s)	373, 544
PvuI	CGATCG	1 cut(s)	101
RsaI	GTAC	4 cut(s)	420, 621, 870, 978
RsaNI	GTAC	4 cut(s)	419, 620, 869, 977
SalI	GTCGAC	1 cut(s)	1001
SapI	GCTCTTC	1 cut(s)	1086
SaqAI	TTAA	1 cut(s)	527
Sau3AI	GATC	5 cut(s)	98, 105, 247, 373, 544
SchI	GAGTC	2 cut(s)	407, 1021
ScrFI	CCNGG	2 cut(s)	591, 781
SduI	GDGCHC	3 cut(s)	8, 460, 1024
SfaNI	GCATC	4 cut(s)	229, 714, 827, 959
SfcI	CTRYAG	1 cut(s)	726
SmlI	CTYRAG	1 cut(s)	1058
SmoI	CTYRAG	1 cut(s)	1058
Sse9I	AATT	6 cut(s)	330, 339, 493, 786, 919, 984
SseBI	AGGCCT	1 cut(s)	429
SsiI	CCGC	3 cut(s)	91, 103, 617
SspMI	CTAG	3 cut(s)	431, 1014, 1046
StuI	AGGCCT	1 cut(s)	429
StyD4I	CCNGG	2 cut(s)	589, 779
TaaI	ACNGT	1 cut(s)	976
TaiI	ACGT	3 cut(s)	261, 565, 601
TaqI	TCGA	5 cut(s)	97, 250, 637, 931, 1002
TasI	AATT	6 cut(s)	330, 339, 493, 786, 919, 984
TatI	WGTACW	2 cut(s)	418, 976
TfiI	GAWTC	2 cut(s)	164, 751
Tru1I	TTAA	1 cut(s)	527
Tru9I	TTAA	1 cut(s)	527
TscAI	CASTG	2 cut(s)	495, 1029
TseFI	GTSAC	3 cut(s)	254, 259, 396
Tsp45I	GTSAC	3 cut(s)	254, 259, 396
TspDTI	ATGAA	2 cut(s)	353, 381
TspGWI	ACGGA	1 cut(s)	1085
TspRI	CASTG	2 cut(s)	495, 1029
Van91I	CCANNNNNTGG	1 cut(s)	310
VneI	GTGCAC	1 cut(s)	1020
XapI	RAATTY	2 cut(s)	493, 919
XbaI	TCTAGA	1 cut(s)	1045
XceI	RCATGY	1 cut(s)	267
XmiI	GTMKAC	3 cut(s)	729, 798, 1002
XspI	CTAG	3 cut(s)	431, 1014, 1046
Zsp2I	ATGCAT	1 cut(s)	820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.